TCONS_00054368 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054368
Unique NameTCONS_00054368
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length697

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054368 ID=TCONS_00054368|Name=TCONS_00054368|organism=Clytia hemisphaerica|type=transcript|length=697bp
agattttcaatttGAAGATGAGAGGTATAAAAAATtaacatgaaaaataa
ataaaaattgtgCGATCACATCTCGTTTGACATAATTCTGTGGTTGGAGT
TAGTCGCTTCTGTCGAGGTTATAAAATACTTCTGGTGAAGAAACCCTATT
GAGGTAGAATGGAAGATCTTTCAGAAGATGAATTTGATGATTATGATGGA
AAGAATGCAGATTCACAATTTGATTTGACGTATAAAGCCATTGTCATCGG
GGAATCACAAGTTGGAAAAACGGCATTGGTCAAACGCTATAAGAATCCAA
ACTCCAAATTACCAAATCTTCTTCCAACTATTGGCATAGACTTTCGAGCT
GTTGATAAAGTAATTGATGGGCTGAAGATACGTGTGCAGTTATGGGATAC
TGCAGGACAGGAGAGATTCCGAACGATGACCAAGAGTTTTTTTCGCGGTG
CAAGGGTAAatttaagGGCGTACTGCTCTTATATGATGTGACAGAAAGGA
AATCATTTTTGCGCGTTGAAGAATGGGTCCGAAACATAAAAGATtttgac
cTGGATAAGGAAGAAGTATTTCTAATTGGCAATAAAATCGATCTTGATTT
TCGTGAAATTACTTATGAAGAAGGAAAGTCGcTTGCAAACCAATATGGTT
TTAAATATTTCGAAACAAGCGCATTGACGGGTGAAAATGTGGAATCA
Run BLAST on NCBI

transcript from alignment at scaffold_242:929984..938355-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054368 ID=TCONS_00054368|Name=TCONS_00054368|organism=Clytia hemisphaerica|type=transcript|length=8372bp|location=Sequence derived from alignment at scaffold_242:929984..938355- (Clytia hemisphaerica)
AGATTTTCAATTTGAAGATGAGAGGTATAAAAAATTAACATGAAAAATAA
ATAAAAATTGTGCGATCACATCTCGTTTGACATAATTCTGTGGTTGGAGT
TAGTCGCTTCTGTCGAGGTTATAAAATACTTCTGGTGAAGAAACCCTATT
GAGGTAGAATGGAAGATCTTTCAGAAGATGAATTTGATGATTATGATGGA
AAGAATGCAGGTTAGAAAAAAAAACCAATTCCATTGAGTTTCAAGCCCGA
AGGGCTAGGCGAAACTTTAACACTTCTCAGGCAAGATAAATTGAAGCTAT
TTATTTCCCATCCAAAGGGACGCGCATAGAACGCGCCGTAATCATGACGA
CAGATTGTATCTAGTGGTTCCTTTGTTTTGGAGGACTACATTTTTTGAAA
TATAGCGATAGATTTGTGTAAAAACTACGCGCGGGTGTTCTGGATGAGAA
ATATATGGCTACATTTCCTATCCAGGAGTCTCGCCTCTATCCCTTTGGGC
TTTAAAGTCAATGAGCAATTCCACTTAAAAATCCCCAAAATTAAATATTT
TCGATGTACGATCTTTTTTTTCTTTTTTTTTAAATATCTCTTACTCAAAA
GTTTCTAGTCTTAAAAGAATAAGACATCTTTTTTAATGTTTATATCATAT
TTTTCTTTTGATAATCTATTTCTTCTTATACCTAGTCTAGCATACCCCTT
TTAAATGTAAGATTCACTGATTTCAGCTCCAGCACCAGTGGAGACTTGAA
ATACTGATTTTTCTTATAGAAAAATGCAATGGTTTTCAGAACATATCATC
ACTTTTTTCAGTCTTTTCAGTCAGTTTTTCATCATTCTTTTTTCAATATA
AACGAAAATATTTCAAAAATAGTTAGTATGTTCGTTGAAATTTTTTAAAG
CTCGTTCAATTCCCTTAACAATAGATTCACAATTTGATTTGACGTATAAA
GCCATTGTCATCGGGGAATCACAAGTTGGAAAAACGGCATTGGTCAAACG
CTATAAGAATCCAAACTCCAAATTACCAAATCTTCTTCCAACTATTGGTA
AGATCACAACGTATTTTAACATTAAAAAGGAGAGCCGGGAAATCCTTGCT
AAGTAAAATCCTAGCCCGAGTTATCTTTCTTTGATTTCATTAAAGTGGCA
ACTTTACACCCCTATCTTTAAAATATTACGGACCAACACAATTCGCAACA
CAAATCTTTCACGATCGCCATTATTATATTTCGGCTAGATTTTGAATCGT
CAATTGGCAGCTGATAAATGCATTTTTCATAATCTAATAAGTAGTAATAA
TCTTTTGTGGCTTTTCGTTTAGGCATAGACTTTCGAGCTGTTGATAAAGT
AATTGATGGGCTGAAGATACGTGTGCAGTTATGGTAAGCTTCAAAAGAAC
TTTTATAATGCGCTAACGTTTCTCTTACTAAAAGTTTTTCAGGGTTAAAA
AGTTTGAATTTACTTAAATTTTTTTCGAATAAGGTTATAATCCTAATTTT
TTTTCAGGGGGGGGGAGTACCAGTAACTGGTAAAAACGACTTCTAAAAAT
AGAGGTATTGGTATTCAAAAAATTCCGGAAAATCCTTTTGGTATACATTT
TATATGTTTGACACCTAACAATGTACAATCAAATCCACAAGGATTAACCA
GGAAGAAAAGCTACAAACAACTGCAAACAAAATAAAATAGTAAAAGATAA
AATTTCCAAAAAAAAAAACAAATTCAAAACTGAACAAGTCTTATTTAAAG
CTTTTACTTACTCGTGACACATCTTTATTCAAAAGGTAATCTTCAGTTAT
GAAGAATGAACTTTCGCTGTCAACCTCAAACAGCTTTTTTATCCTTGCGG
TCTTGTTGTAGATGTATTGTTATTTTGCTCGCACTAAGGGGTCTTAGCCT
ATAGTAGATTTTGGAGCCTTTATTATCAAGAAAAGAAAGAAAAAGGAAGA
AATATTTTCAAAAGAAAAGAACTCTTTGTCTTAATTTACCTAGAATTTTG
AACCATAGCTTTTTAAACTAGATCATATTGTTTTTCAGACAGGGAAAAAA
CACCATACACGTACGAGATCTTTTGCTTATTTCTTTGAGCATTATCTAGT
GTAAAAAAGTCAAAATCATATTGTATCAAAAATCTTATCGTCATAAAAAT
GACCAATTTGATCTTGATGAAAATTCTGAAGAAAAAAAGATAAAATTTAT
CTGAAAGTTGATTTTGACATCTAACATGGATCTATGAGGGAGTCAGATCA
CGAAAAGTTTTATCTTGATTTTTCCTGAACTGTCATGATGGCCAATATTT
TGAACCTTTGACAATATTTTGACAAAAAAATCCTTACTCTTTGGTTGTTT
GTCTCCCAACATTACATCTTTTGCCGGTTTGCTTCGAGATAGTTAAAATT
ATATCTAGAATGTAAAATACTTCAAAAAGAACAACTTATTCAGCGCATTG
TTTCAATGGACCAATCATGTGTTGCCTTTTGTTGACAAGAGCCAATCACC
ACTTGTTTTAGATTGGGTCCCAGTCCTTGCCCGTTGCCCCTTTGTTGTTT
ATCGATCCTTCCACTATGTAGTATACACACTTTTTTATAAGAACAAGTAC
TTTTCAGTTATGCTCTACTGATCTTATAATATGATTCTTAATTTTAAAAT
TGTTTTAAATATGCTTAATTTTATCTTTTATTATCTTCAAAAGGGTTAGT
ATTCTTTAGGTAGTTTCTCAATTCTGAGGCTGGGTTTTTTTTCTTAATCA
GTTTTTAGCTTCTTAGCCAGAATATGGTCGTGTTCTTAAATGATTGCTCT
TATAAAAAGCGTTTAATTAGAGTTGACAAACCGCCTGCTGTTAGATTTTT
TAGATTTTGAATTTCATGAGAAATGGCTTAAGTGTCTGTAAAAAAGAGGT
GCCAAACCTCAGAATTCTACCTTGTCATTATTCAACTCATAAAATATTTA
TCTCTCGGATTACGGCAATTTATATTCCCTTTATTCTTTGCACTTTAAGT
TTAATCAGCGAAATAAGACCAATAAAATAGGGTAATAAAGACAAATTTCA
ACTCTGTAATCAAAGTGTAATATTTTCTCTCTCGGGTATTATAGCCAAAA
TTGTCAATAGTTTGATATGCTTTTGTCGTGTTCTCAAGTGCCGAATCCTT
CCTAAAGAAAGAATTATATAATATAAGGCTTCTTTCCTATTCTCTTTATA
TCTCCCCAAGAGGTACTCTTCGGTTCCAACTAAACGCCTCCCCCCCCGTA
TGTTAATTTTTCGAAAATTTTCCAAACCCCCGGGCCTTATAAGAACCCCC
CCCCCCCGTTTTTTAATTTTTCGAAAAATTTCCAAACCCCCGGGCCTTAA
AAAAACCCCCCCCCCCCCGTTTGTTAATTTTTCGAAAATTTTCCAACCCC
CCGGGCCTAAAAAAACCCCCCCCCCCCCGTTTATTAATTTCTAAGAATAT
TTTCAGCTGTCTAGGAGAATGCCCCTTATTTTGCTCTAAATAGCCTGATT
TTAGCCTATATTTACCTTATTTTTGGGTTTTCAGAAGTACAATTTCCAAC
CCCCCGGCAATTATAGGTCCCTCCGTTTATTAAAATCTCGAAAATTTTCT
ACCCTTCCCCCGAATACCTAAGAGTATATTATTTCCTCTTCCTTTGACGA
CGTCAGAAATTTGTGCAATAATTATGAAATTTTACAGAACAAGATTTCCA
AATTATACATACAGCGGTATATAAATTTTTTATGGAAATTCAAATTGAAA
AAAACATGTATTTTGTGAAACACATTATATCCACTGACCTTTATATATCC
CTGGACCAAGCTATATCCGCCATCTTTGATCGAATTTTTATTTGAATTGG
TACCCGTAAAGAAGCCATTGCAGTGTTGAAAATTAACGTTTAACGACGCT
CATCATCAAAAGTTTTTGAGGGAAAGTAGATCTAGCGCTTTCGATGCATT
TACACTGTTAGTGAGTAGTGCCGCCATTAGAGTTAGCTCCGATCAAAGAT
TTTGCTTGGCTGGTATTGAGAAACATGGTCGGTCTAGGGTATATAAAGGT
CAGTGATTCTATCCTGATCTTTTGTCTTTGTAGGGATACTGCAGGACAGG
AGAGATTCCGAACGATGACCAAGAGTTTTTTTCGCGGTGCAAGGGTAAAT
TTAAGGTTTTTTTTCTCTGTAATTATCATTCTTCTTTTACTATAAACTGC
TATAACAAAAAAAGCTTAATTTAATTTATGGTTTTTTAATGACCGTGAAA
GTAAAATAGTTGCAAAATGCAAAAAAATTTTCTACCAGCTTAAACTTTTC
TTTCAGTGAGTATACCATTTTAAACTATTGAAAATTCCTTCCTCGCCATC
GAGTTAAACAATTATATCTTTCTCCTGGATCTCCGTTATTTCAACGAGGA
ATCGTTATTCTCTCGTGATGGGTTTTTGGTTGTATTTCCTGGCTAACAAT
GGGCTGTTCCATTAAAAATCCATACAGGGGGAGGGTGGACAAACCTTTTT
AAGTCAAAATAAAATTCTTCGAAATGTGAGGATACCCCCTGGAAAATGGC
AAAATTTGCAAAAAAAAACCTCGGAAAAATTATTTTTATACTTAAAAGTG
ACGGTGGACGAACTAAAACCTCTCTTTTACCCTCGGAAAATTTTAGAATA
ACTATTTTACCCCCTGGAAAGTGAAAAAAATACTTCTTTAGACCCCCCCT
GGAAATTCTTCTCAGGTTACCCCCTTAAAATGTTCGTCCACCCCCTGTAT
AGAGATAAAATGGAATGGCCCAATGCTCATTATAATCGTTTAAATAAAAG
TAACAAATAGAGTTTCTATCAGTTAAATAGCAAAGGGGTGAAGCCTCCAA
ATGGCCCTGACGTGAATTACCTTGACGACCAAAGGTGCCGCTGGAGCTTC
AAAATGGAGCCTCTCAGATAGTCATTACCCTTGCAGACGAAATTTAAGCA
CTAGACTGAAAAATCAAATTGTACCAAGATTAGTTTCTGTTAGATTCAAA
ATCTGAATACCCCCTGAAACAAACTTAGTAAAAAACTTATGAGTATCTTC
TACCTCTACTTTTAAAAATTGACCCGTTCTTTTTTCTGTTATAGGGCGTA
CTGCTCTTATATGATGTGACAGAAAGGAAATCATTTTTGCGCGTTGAAGA
ATGGGTCCGAAACATAAAAGATGTAAGTGGGCTTAACTAACTTATGAAAG
TGTTTTCCCCCATTACAAAAATATTGTTGTTTTGCCCAAAGATTCTATTT
TTTTTCGGAAAGGGGATTTTTTTTTTTTTACTGTTTCAATTGCAAGAAGT
GTTAACCGTATCCCCTGAAGATTATTTTTTAAAGTGGGTGTTTTTTTTTA
AACATCTAATATGCTATTTTCCTATCCGATTCCCCTTTGAAAAATAAGAT
TAAAGTACATTGGATTAGAGATAGGAAAAAAACGAAAACATCACCTTTAA
AGAGGGTGAATGGGCAATACTGTTGAAAGACTTGTTTACCCAAGTATTTT
GCCTTTTTTAGCCCCAAGAAGGCACCCTCGATTATCTTTTATCTGGAAGG
GCCATGCCCGTGAAAATAGATACACAAAATAATACACAATGTTCCTTAAC
ATAATCGCCGGGTGTTCTCTATAAGATTCACTGTTTTTTGAAATGTAATA
GTTTGTTAGGTTAGGTTTAAAGTACACATTTTTTATAAGCAACCAGGCTG
CAAAGGCTCGAGGGCTCAAATTAGCCAAACTTCTTCCACTATCTCGTAAA
GTAAAAGCTTTTTAGATAATCTAAGCATGGCAAACGACAGCCCTACAAGC
ATAAATATTATATAAGGGGTGGTCAAAGCTAATTTTTCAGAAAATGTGCT
AGAATGCTTAAGTAACCCGATCCCTGAACCGATAATTTGAGTTGCTTATA
AAAATCTCTAAGGTACAATGAATTCTTCCTGGAAAAAAAACTGATTTATA
ATGGTTCTTAGGAGGAAACGTCATTTCTCAATAATTTTAACCGCTATTGT
TTGGATATTACCAACCCTCTGGATACACGATTTACACCTAAACAATGGTC
AAACCTGTTCTAGTCCGTGGCAATTTATTTACTGATTCTTTCTAGTCCTG
GACATTTTTTTTACCTGAAAATCCCGCAAAGGGTCGTAAAAACCATAAAA
ATCTAATTTAGCCTCCTTTAACAGTATAAATCTCGAAAATTCCAATTTTT
GTTCCTTAAAATGCGAAATTTCCGGAAAAATCGGCCAAAATTCCCAAGCT
TTAGACTTTTTTCCTCCCGAAAAGACCTGAAAATTTCCGGTTTTCCAAAA
ATCGTGTGATATCCACCATGCGTTTTCGGCCGAATCTAGTAATCCCAAGT
TTTTTGTCCAGTGCAATCAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTAGTTTGACCTGGATAAGGAAGAAGTATTTCTAATTGGCAATA
AAATCGATCTTGATTTTCGTGAAATTACTTATGAAGAAGGAAAGTCGGTA
AGATTGCATTTTTTTTCAATTCTTTCTTTTTTTCAATAATTGCCACTTGA
AGAAGCACCCCTGCCCTCCGGATTAACCCTTCCCTTATAGGAGGTGCGTG
TATATGGAACAAGTAATTGTAAGGAAAGAATCTTTTAGAGAATAGATTAC
ATATAATCTTAATAATTATATTCTTTCAGTATTCAAACTAATATTTTGAA
CCTCTTTGAACCTGTTTTACATATCTAAAGTGACTTATTTACACTCAAAG
CAAATTCAAAGGCAAAGCAAGGTTCCAATTTAATTTATTAAAGTTGCCTT
GACTAAAGATTATTTAATAAACGTCCCCTTGGAATAAAGTGGGGGGCGTA
CGAGGTTTTGAATTACCGCCATCCGGCCATTTTTTTGAAAATCACCGTTA
TCCCGTCCAAATTTTTCGAAAATACCGGTCCCGCTGTTTTTCCCATAAAA
CTCTAAGGACTAGAAGTCACAAATTCGGCAAAATGGAATAGAATGTGTAT
GAGGTCGATCACTATTTTTGTATTTTGTTTGATTGCAAAATTTCAGCCTA
ATCAGACAATTTTAGAATTTTTTAGTCTGCCCCAAAGTTTAGCCTCGTTT
TGAGGCTAAAACTTGTGACCACGCCCAAAGAAATCAAAACTTTGAAAAAA
TTTAAAAAACCACAGATATCTGTAAAGCCGGAAGGGCTAGATTTGCGGCC
TGGATCAAAAAGTGAAGCTCATTCTTGTTTGTCTCATCCTTGTTTGGGCT
TTGGTAGGATTTCCTACCAAAGTCACCTGACTAAAATCATGCAATTTCAC
TGGTTTGAGAGATGCGAAATAGCGTTTGCCGCCTACTTTACTTGATCTCG
CACTCCAAGAACAATGAAAATGGTAGATCCTATCCTATGCTGGATAAAGG
TTAGAGCTGCAAATCTAGCCCTTTGGGCTATCATAAATCATTGAATAAAA
GAAACACCCCAGGGATTCACCCAATGAACAAGAACAAGCGTGCAAAATTT
CAGCCGACAATTCGACCATTTTTATAGACTCCAGCCTACCCCAAAGTTTC
GAGGTGACAGATAGGACAAGCTGATCGAATTCAAAAAAAAAACATTCAAA
AATTCGAATCTTTGTCTGGTTCATCCTAGGCTACGGTCATATCTCCTGCG
CTCCGGACGTAAACCTTCTTCTCTTCGAAGTGAAACAAAGGTGATATGAC
GTAGCCTAGTTTATCCTCGAACAAAACATTTTCATAGGAACTGGGCACAT
CTGCATTAACGTTTCAAATAAGGTTTTTTATGAAATGTAAGATCCTTATT
TTTTGGGTGTTTTTCGCGTTTTTTCACCTTTGCTGACTCCTGTGACAAGC
TTTTTTATAGTCCGAAAATTTTATGTACACCGTCTACGTATGGCTTTTAC
CGAAACACCGTTGTTTTTTATAAGAATTACCTCATCCCGGACGAAAAATC
AGGTGTTTTACCGTCACCGTGGCCCTTGCAAAATACTGTTTCCCGAACAC
TATCGTTTTTACCGCTTCCTGGCCCTAAATTAGGCCTTATCCCGAATACC
GCCAGATCAAACGCCCCCCACAATAAACAACCCCTTGGAATAAACGCCCC
TCCTGAAAATGTAGGAATCCTGAAAAAATTAGGGGCATTTATTCGAAGTA
CAGTAAATAGATATATGATATTAAGCAGATTTTTTTATTAAACGTATATT
CATTTCACAACCATTAATGACAGTAGTAAAAGGTTTCAAAGAAACGTTCG
CCAAAGTCAACTGGATCGCTAATTCTTTCAATTATTTTCCTTTTTCTTCA
TTTTAGCTTGCAAACCAATATGGTTTTAAATATTTCGAAACAAGCGCATT
GACGGGTGAAAATGTGGAATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034278XLOC_034278Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054368-exon-scaffold_242-1575043694:938146..938355TCONS_00054368-exon-scaffold_242-1575043694:938146..938355Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1575043694:937309..937431TCONS_00054368-exon-scaffold_242-1575043694:937309..937431Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1575043694:936973..937033TCONS_00054368-exon-scaffold_242-1575043694:936973..937033Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1575043694:934201..934272TCONS_00054368-exon-scaffold_242-1575043694:934201..934272Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1575043694:933184..933261TCONS_00054368-exon-scaffold_242-1575043694:933184..933261Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1575043694:931859..931945TCONS_00054368-exon-scaffold_242-1575043694:931859..931945Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1575043694:929984..930049TCONS_00054368-exon-scaffold_242-1575043694:929984..930049Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:938146..938355TCONS_00054368-exon-scaffold_242-1510915933:938146..938355Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:937309..937431TCONS_00054368-exon-scaffold_242-1510915933:937309..937431Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:936973..937033TCONS_00054368-exon-scaffold_242-1510915933:936973..937033Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:934201..934272TCONS_00054368-exon-scaffold_242-1510915933:934201..934272Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:933184..933261TCONS_00054368-exon-scaffold_242-1510915933:933184..933261Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:931859..931945TCONS_00054368-exon-scaffold_242-1510915933:931859..931945Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1510915933:929984..930049TCONS_00054368-exon-scaffold_242-1510915933:929984..930049Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:938146..938355TCONS_00054368-exon-scaffold_242-1491911889:938146..938355Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:937309..937431TCONS_00054368-exon-scaffold_242-1491911889:937309..937431Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:936973..937033TCONS_00054368-exon-scaffold_242-1491911889:936973..937033Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:934201..934272TCONS_00054368-exon-scaffold_242-1491911889:934201..934272Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:933184..933261TCONS_00054368-exon-scaffold_242-1491911889:933184..933261Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:931859..931945TCONS_00054368-exon-scaffold_242-1491911889:931859..931945Clytia hemisphaericaexon
TCONS_00054368-exon-scaffold_242-1491911889:929984..930049TCONS_00054368-exon-scaffold_242-1491911889:929984..930049Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:929984..938355 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.742092	1.73585	5.03116	6.70212	10.6783	13.2348	9.19746	9.98861	7.40291	7.92327	11.7906	5.74747	4.52367	4.17097	9.56528	7.65891	8.10357	10.5605	5.72775	4.98	6.8616	6.84096	3.6594	2.59183	12.2567	15.5845	4.9079	4.64207	5.65508	5.0126
Blast
[Close]
BLAST of TCONS_00054368 vs. Swiss-Prot (Human)
Match: RAB8B (Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8B PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 6.525e-30
Identity = 37/78 (47.44%), Postives = 57/78 (73.08%), Query Frame = 3 
Query:  219 FDLTYKAIVIGESQVGKTALVKRYKNPNSKLPNLLPTIGIDFRAVDKVIDGLKIRVQLWDTAGQERFRTMTKSFFRGA 452
            +D  +K ++IG+S VGKT L+ R+ + ++     + TIGIDF+     +DG KI++Q+WDTAGQERFRT+T +++RGA
Sbjct:    5 YDYLFKLLLIGDSGVGKTCLLFRF-SEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGA 81

HSP 2 Score: 69.707 bits (169), Expect = 6.525e-30
Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 2 
Query:  467 GVLLLYDVTERKSFLRVEEWVRNIKDFDLDKEEVFLIGNKIDL-DFREITYEEGKSLANQYGFKYFETSALTGENVE 694
            G++L+YD+T  KSF  ++ W+RNI++      E  ++GNK D+ D R+++ E G+ LA  YG K+ ETSA +  NVE
Sbjct:   83 GIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVE 159
The following BLAST results are available for this feature:
BLAST of TCONS_00054368 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RAB8B6.525e-3047.44Ras-related protein Rab-8B OS=Homo sapiens GN=RAB8... [more]
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