TCONS_00054364 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054364
Unique NameTCONS_00054364
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length584

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054364 ID=TCONS_00054364|Name=TCONS_00054364|organism=Clytia hemisphaerica|type=transcript|length=584bp
GCTTTACTTTGAATTTGATCATCAATCAGGAGAATATTCAGGTTGAAACA
ACACATTATGGACCCCTCTAACCCACAAATTATAACACACGTTCAAAAAT
CACTGAACTACACATTATTCGACGCTAAATTCGTTCCAAGAAGTGCAAAG
TTTGTTTGTGTTGGATCAAAAGCAAATGGAAGTGGTGTCATCCAAATGTA
TGAATTGACCCACAACGAAATGAAAGGAAATGTTAATCTTCTAAAAGATt
TGGAGAAAAGCAAATCTTTTAAATGTTGTACTTTTGGTGCATCCAGTTTA
AAGACTAGATTCCTGGCTACCGGTGATTTTGATGGAAAACTTGCTATATG
GGATCTTGAAAAGCCATCATTACCAGTATACAGCACAAAAGCTCACAAAG
AAATCATCAATGGTATCGATGGTATTGGAGGTCTGGGGATAGGAGAAGGA
GCTCCGGAACTGGTCACGTGTAGTCGAGATGGTTCAGTGAAAGTATGGGA
CCCTCGTCAGAAAGATATTCCTGTTGCAAATATGGAAGCATCCAATCAAG
ACATGAAAAGAGATTGTTGGTGCGTCGCCTTTGG
Run BLAST on NCBI

transcript from alignment at scaffold_242:902978..915875-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054364 ID=TCONS_00054364|Name=TCONS_00054364|organism=Clytia hemisphaerica|type=transcript|length=12898bp|location=Sequence derived from alignment at scaffold_242:902978..915875- (Clytia hemisphaerica)
GCTTTACTTTGAATTTGATCATCAATCAGGTGAGTTGAGAATCGACTTCC
ATTCATTCTAAATCTAAAGTTGTGGACGAATTAGCTACCCTTACCGTAAG
CGTAAGCAGGCAGTCAGGGCCTCCTTCTTGGTCTTTTTATATAACATTAG
TTCGGATAGAATAAAATCATACCTGATCAACACAACCAAAGCTTCTGTCT
TGTGTTTACTCTTTCCTTCCCAACAACTTTCGTTTTTGGTTATTTTGAGT
TTTTTTCGAATAAATGGGGGGGGGGGGGTGGAAAAATTTTCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNGGAAAATGGACCTTTAAACCAGACGCCCGCGCTCAATAGGATCGATCA
TCGGAACGGCTCGATGACGGATCGATATGTGATCGATGGAGTCGTAGAGT
CGTCTAATCTTGACATACGTCTTGCAATCTCGAGACCAATTCACTGTGAT
GTCATTATGTTTTGGTTTGTCTTGTTTAGTCTAGCAAAGCTGCATTGAAA
TACAGGATAGTTGAGACAAATGCCCCCAATTTTGCCCCCAACTTTTGTCT
CTTTTACCTTGGTTTTCAAGCTGAAAATCTTAAACAAAAGTGAGACCAAG
CGAGATCACAAAAATAAACCAAAACAAGTAAGAAGTGGTCTAGACGTATG
TCGATATTAAACGACTCTACGGTACTTATCCGGATAGGAGATCGATATAC
GATCAATACTCAAGGTTTTTTTAAGCTTATGATTAGTTATCGATTATTTA
TTGATCTATCATCGATTAACGATCGATGACGAATCGGTTATACTCAATTG
AAATACTAGCTCGATAATGGATCAACGAAGGATCGATACTCAAGACTTTT
TAATGGCTGAATCTTCCATCGATCTCGTATCCGGATCGTTAAGTAATCCA
TCGATCACATATCGATCCGTCATCGAGCCGTTCCGATGATCGATCCTATC
GAGCGCGGGCGTCTGGTTTAAAAACCCTAAAAAGGGTCAAAATAGACTAA
ATTTAGGCTTTTTAGAGTAAAACAAGGAATTTTCCTTTTTGTAGCTAGGA
ATTTTTTAAAAATGAATAAACAGGGGGGTCCTAATAAGGTCCGGGGGTTG
GAAAAAAATCGAAAAATTAACAAGCGGGGGGCCCGTTTATTTGGCACCTA
AGAGTAACATATTACATACATATAATAAGCTTATATTATCAATAATACAC
TTTTAATGCTATATGCATGTTATGTGTTATACGTAAGTAATATACATATT
ACAATAGACCTTTTTTCAAAGAGGCCACCCTGTTGAATAATTATGTAGTC
CAGCAGAAAAACAATGATAAAACCATGCATAATTATTACAATATGCATGA
TACAGTAATTATGCATGGTTCTATCATTGTTTTTATATTATATTTAACAA
TTATATTGAAAAGTAATAATTCGCTATAAGGAAAGATAACTTGTGCGGAA
AAGAAAGTCTTCATTTATTGACCCCCGGATTTTTCATCGCATAATTTCTA
CGGGAAATCGAAAGTAATTTCGTTTGGCTTGTGATGTTTGAGAGCTTGGA
CGTTGGGAAGCTGCAAGGATAAAGGTAAACAAATTATAGTCTTTTTTCTG
AAAGAAAATTTAACATTTGTCTAGGCTGACTTTCTTTCCGCCATCACGTT
GATATCGCCTTCCCACCCGTCTTCGTTGAGTTTCTGTCTATTTGCACCAA
CATTGAGTTTGTTCATACCCGCATTGATATTGTTAATCAAAACGAAAGTT
AAAAAGACGCGATGAAGTCGCAACATTTTGAAGGAAATGGCAGCACGCTG
GCCAATGAAAAAATAGTTTTTTTATCAAAGCTAATTCAAAACTGTACTTT
TGAAGTTGCGAATTTGTGCTCAAAGGTGAAAGCAAGTGAAATTGTACCGT
GAGTGGTCCTAAATCCGACGGCCCTGCCTAAATCCGATGGGGTCTTTCAA
AGATACAAACTAAAATAAAAACAAACCTTTTGCTGTGACGCAATGAAGAT
ACCAAAGTGTCAACTGAACTGAGAGATTTGATACACTGAACCAATTGAAC
CAAATAACAATAATTGCTTCTCATACAAAACATATTTCTTATTACAAAAT
TGTTAACGTTTTAAACACAAAATAACAGATTCAGAATAATTAGAGGTAAT
TATTTTTTTTGATCACATTAATTGACATCTTGGCATTATAGTAATCTTGT
TAAGTGTTTCATTTCAAGAGCTCTTGCAATAGTTTATTGTTCAACTTGGA
GAGGGAATGTTTGTAAAGATATAATTTTTTTCATAGCAGTTATTTAGGCA
GGGCTGTCGTATTTAGGACCACTCACGGTATGCTTTCAGTGGAGTTTGTG
GACAAAATCAGAAAGAAATTGGCTGAAAAGATTTTCGTCCCAATACTTGT
TTTTTTATCGGTATGTAGTTGGACCCCCCCACCCCCTTATCGGCCCAATG
CCAATAAAAAATTCGAAAGTGTTTTGTCGAGGGTCCCTTAATTGTTTTAA
AACATGTCAATATATATCCAGTCACATGATTAGCATCCTATTGAGTATGA
AAAAACATTTTGTTGTAAATTGGTTCAGAGGCCTTATATTTCATGATTTT
GACAATATTTTTGACATTTAATATCATTTTGTCAAAATTTGTGGGTGATA
TATTATTTAAAAATTTTCATGATAATACTTATTCGTATATAATTGCTTTA
GACATACTATACTAATAGTACTAGTACTATTTCATGTGTTATGACTATGT
AGTACGTGTTATGAATTTTACATTATGATATCGTTATATTTTTTCCAGTC
TATAATTTGTATGCCCCGTGACCAGTGCCCCGTACCCCGTAATCCGTGCC
CTGTGACCCGTGTTTCGAACTAGCCGGAACTTTCCCGTGGGCATGATTGG
GTGTACCGCCATCGTGAAATATTTTTCGTGAGATTTTACCGTATTCTAAC
GCTAATAAAATCTAGATAGGAAACAAATATTACATTTGATTCTTTTTTTG
TTCGTATTTCTAAATTTCACGATAAAAAGAACTATTTACAAATTATTTTC
GACATTGACATATTTAATGATGTCATAATCAATGCCGTGCATATTTTGTC
AGCACCGTGCATATTTTGTCAACATCCTTTTCATTGGATAAATACCACTA
AAATATACAAGATAAGTAAACATAAATTTATCGAAAGCTTGAATCACTGA
TTGAAAAAGAAAGATCAATTTCTTAACACTAAGCATAGAAGCATAGTTTC
AACCTTACTATCAATTTCAGCTGATAAAAAGGTTGTCGGAATTAGAGGAG
GGATGTTGACATTAGACCAAGTTACGGTACTGTAATGTATCAGACCTGCC
TCTCTCCGTTCAATGAGTTTTCACTACACCTATACAAACGCCTGATTGCA
AACAACTCTTGCTGCGGGTCGTCTTTTTGCGTCCAATCAGATTCTAGTAT
TTTCTCTCACAATCAAAACAACAATTTGTCGTTTCTGGTTGGTTCTGTTG
CCTGTTATCACATGCGTTTGGTTTGGGAATGCGAAACACAAACGCGAACT
AATCATGTCTAAACTTTTCAATATATCTCCAGAACTAACAGATTTTTTGA
AATTCTGTAAAAAAGGTCCAAGTTCCTGAATATTTTTACTGTGTTCTGTG
AAAAAATCATAACCATCAGTCAAATACTCGTTCATCTATTTAAGATTGAA
GACAAAAATTTGCACAAAGAAAAATAAACCTTGGGCACAAAAAATGCTTT
TTTTTCCACCAAAAAACAAATAAGTTTTATAGACTTACCTTCCCCAAACA
TTGAAGAAGACTCTCTACTAATTAAAGTAAATGAGACAAGATAAGATAAA
ACCTTAAAATCAACCAGAATTTACAACCTTTTGTCCAAAGCAAAAGACAT
GCTTTTCTCGCCGCCATCTTGTTAATGTTTTAGAATGAGAATTATTTTCA
GTTCCAGTTCCCACGGTTTTTTTTTCATCCAATCAGATCGCGCGATTTCA
CTTTCGCTTTCTCTAGTCCAATAAGACTGCAGGATTTGAGTCATGTGACA
TCTCTATTGAAAAACCCGCACTGAATAAAATAGAAATACAGGGGGTCACA
CTATTGGCTACAGGAGCTGAAAGCAAACAATTAAGGCCAATATTTTTGGT
TTTTCTGAAGGACAAAAGGTATAGATAGGAAGCTTTACTGAAGGAGGGAT
AAGGCTGGGACTATCTATTTAAAAGATATGGACAAAAAAAGGCACTTTTT
TGGGTGATAATTAAGATTTTACTTANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGAAAATTTCAGATCAAAA
CAAACAAGGAATTATTATTCAAAAAACATTTCAACAAATATTTTTCAGCA
TAAGCTTTTCGTTTTATTAAAAAACATCATCAGTGCATATGTTTTTTTAA
TAAAACGAAAAGCTTATGCTGAAAAATATTTGTCGAAATGTTTTTTGAAT
AATAATTAATTTTCTGGCTATTTTATTAAAACAAGGAATTAATTCCTGTA
ACTCGATGAAAATTGGAAATTGCTGGTTTTTGACTGTTTCTGATCCTAAA
GTGCTATTTTTTGGTAAAAGCTATACAATTTATGTTTGGATTTCTAGAAA
GCTTACCCATTCATTGTCAATATATTTTTTATTTGAAAGTAATCTCTTCA
TGGAATAAAAAGATTTAATTAAAAATTTATAGGCCTATTTGTGGTAAAAA
ACTGATGGAAAACAGGGAATTTCCCCACAATCTGCATTAATTTATGCAAA
ATTAAACACCTTTTTGACCACAAATAGGCCCATAACTTTTCATCTAGAGA
AGTTGGGACTTTGGTGTAATACACTTTTTTGCTCAGTTTGAAGAGCTCTA
TCATGTGATATAGGTCTTTTTTTAATTTGAAGACCCCCCAAAAATCATGA
ATTTCCAGACCTTGCAATTTTGCCTGGAAACNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCATGAATTTCCAGGCCTTGCAATTTTGCCTGGA
AACGCAAAAAATCGCCAATTACTCGTTACTTGCACGATAATATCGTGGAA
ACTTTTTGATTTTGGAATCTTCATATACTAATTCGTGAGTTTCCACCAAA
AAAAGTTAGTTCTAAGATGTGTGTCACGAAAATTGTTTTCTAGCCACTTT
TTTCGATCTCAGCAGCGGGACTAATTCCAAAATTTGTCTGTAACAAAAGT
TTTAACCAAAATTCAAAATTTCCAAGGTGAGAGAGAAGAAAATGTATGAA
TTTCCACGGCAATTGAATTAAAAAAGGTAAAAAAGAGTGGAATTTCTGCG
ATGCATTTTGCGAAAGTACATGGATTTTCATCAGAATTTCCGACCACCAC
TGGAAGAAAAAAATATTTCCGAGGCTAGAAAAAAAAATACACGTTGTCCA
ACGAGAGTATATAACAAAAATTTTCTGGAATGGCCCATTGCTCTTGGGAG
TACGAAACTTTTTTGGCAAAGTTGAGCATGTTTTTACCGAGTTTGTTTGG
AACAAAGCTCATTTTTAGAATATATACATCTTTTTAAAGTCAAAATTATA
CTATATATTGGCTTTAGAACCTTAGCTATTTTGAACCTGGAATTTTTGAT
ATTCTGGCTGCTGCTAGTCTGGAGATCCATACTCTCTAACCAAAACTTAC
ACCACATAAGCAAAAATACCATCAGAAGCTACTCAGTGAGAGTATGGTAT
TTATGACCCAGTTTGAATTTGTTTACATTTGGTTTGAATTTCGTGCCAAA
AAAGATTTGCGCACTTCCAATCGAAACAATAGTATCACATGATTTCAACA
ATTGTTAAACAGCCAATAGAATTCTGCGACCAGATTTGGCATCTACAAAA
ATACCAGGCTACTCTTTTATTTCTATATTATATATTATTCGTTTTAACTA
TAAATGCTATACTTCAAAACCACACGAACAGAGTAGACGGGTCTCCCAGC
TAGGCTGCTTCACGTTCGCAATCGGTCATTTTGTCTCAATTTAAAGTTTT
TAAGTTTTATGATTAATTGTCTTGGGAACTTGAACTTGATTCAGGTATTC
TCTCATCCTTGTTGTTACAAATACATCCTGTACATAGCTGTCAACTTTTT
CTGTATTGGGCGGGATAGATTCCCACATGCTAACGTTTTCTCCCGTTGGA
AAAAAATCAGCCAAATCTCCCACATTTTCAGGATTTTTTTCGCATCTCCC
GCATTTCCAAAAATTTTCAGATTTCCTGAAGAAAAATTCAGGAATGCCAA
AATTTTCTGAATTTGGAAAATTGGGACAAAAAATGCCCAGATTTCCCGAA
AAAATTTTTTTTCCGGATATCTCGATATCGATTTTGCAGAAAAATTTCCC
AGATTTTGAAAATTGGATTCCCAGGGAAAATTTTCCGACTTGGAGCTCTC
CCACATTTTTAGCCAAGAATAGTTGTTTGGGAGAATGACAACCTTTTGAA
TAACTAATTACTGTACTGAAGCAGAATTCTTTTTAAATGATAACATTCAT
AATAATTGATTTGTCTTTTACAACACCTAGCCGTTGCCTAGATACAAGAT
AATTATCTCGTTTGTACTGGCTGGAGTAATTTGTTATTCAGTAAATCATC
TGTTGTAGATGAGGCTCCCAAGCGGTTTGCAGGGACTTTTGTCTAGCTTT
ATAATGTGATTTAGAAATTTTTTCTTTGTGGTTGTGTGAAAACATGATTG
TGATTTGAAAGATTTTTGAGCTGTGATGTGTGATTTTGACTTATTTCAAA
GGGATAAGTGATTATCCAAGTTTATTACTGTTTGCGTGATTGTGATTGAA
AACAAATAATTGCATAATAATTGTGATCAGAAAACTTACTGCTGGGGGAG
GCTCCGAGATTTTATGAAGAAACAACAAAATAATATCTCATTCGGATGAA
AATTGAGTATATACCAGTTTGAGACAATTTTGGGTTGCAAAATGCTTTTT
AAAGACCGATTTTGCAAGTCTATAACTTATAAACTGATGAACTACAAGTC
TTCAATAAGGCATCTTCAAAATATCTTTTTAGCAAGAAAAAAAATCATCT
TTAACAAAAAACAGCAGTCTTCTACAAAATAAGTTTAATAATGTGGACTG
AAATTCTTTTTAAAGTGACAGTATTCTGGAGGTGGAGAAATCAAAATCAT
TTGGGTCTGGGATAGGTGCATGTTCGCCATCGTGGTAATGATAGAAATAA
CTAAGAGTCTCAAAAATGGCAACAGGCATGGAACCAAATCTTTTGCAGTG
TGATAGCAAGGATTTATTATACACTGGATATACAAGTACCTGATTTTTGC
CGATTTCTCGTGTACTAGCTATGTCCGCAGTAATGATATTATTGTTCACT
CTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNCTCTCCTTCCCTCATTAAATGTTTTTTCGAAGCATTTT
TATTGCATTTCTTATTGAAAATCACTCATCCAATTCCCAAAAGAGACTTA
AACTTTTCCTGTGAGGGTCAGATTCTTCCACGTAATTGATAATTATAAGT
CGTTATGACGTTTCAAGCTGTGAGAAAGATGCAAAAGACGTGTTGCGTAA
AGAAATTGAATGTTGACACCGGAAATTTTCAAACTTCAACCTCAAAAAAA
CCACCTTGCCACCACGTGCCTCCAAAGGATTTTCATACCACAGTGGAGCC
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTCTTGTCTAATGATGATTTTCTCACACCA
GATTTCACAAATGTATCCAGCTTGGTATGCTAGCCTTACTTTCAAACTTT
TTTTTTGCAAATGTACAAAAAGAAAGAGTTAGAGAACTTTTTGAAAATAA
GACTGATAACCATTTTTTTAAATCAGACATCTTCGAGCCGCCATGACAGT
TGTCCTTTGCGGACAAAGCTTGAACATCAATTGTTTTCTGAAACAATGAA
AATACAATGATCGCTCTCCATCGTTTTATGAGTCTTTTATCCAGTGTATA
ATAAATCTTTGGTGATAGTATTCTGGAAATACTGCAGGAAAATCAAAATC
ATTTGGGCTCGGAGGTTGGCTATATTCACCATCTTGGAATTCAAATCCCT
GCCAAAATGCAATATTTTGAGCAAAAACTCCTTATGTATGACTGGAAAAA
ACTTAAAAATGATAATAGACATGAACTTAATTTTTTTTTGCAGTGATAGT
CTTCTAGACTTAATTGAATAAAATGCCTCACAATAGGTTGAATTCTCATA
AAAAAACACACTACATCTTGAATTTTCTAACTTTGCCACAAAAATGACTG
TTGACGCCTGCCCTATTAAAAACATATAGAGCCCAGTTGTATTAGCTTCT
TCCCAGATAAAAGACAACAAGATCAAAACATCACATTTACTTCATCCCTT
AAATCAAAGCGTGATGTTGGTAGAATTGACAACATGTTATGACATTTGAT
AATATTATCCTCTCAAAAAATTCCCTATTTTGGCTGCTCGAAACTGCAAA
CTTAGAAAAATAGCTTTCAAAGAACTTGGCTGTTTAAACACAATGGTCTT
TTATTTATTTTCAGTAAAATCAATAAAATTCAAATTGCTGCAAGGAGAAT
ATTCAGGTTGAAACAACACATTATGGACCCCTCTAACCCACAAATTATAA
CACACGTTCAAAAATCACTGAACTACACATTATTCGACGCTAAATTCGTT
CCAAGAAGTGCAAAGTTTGTTTGTGTTGGATCAAAAGCAAATGGAAGTGG
TGTCATCCAAATGTATGAATTGACCCACAACGAAATGAAAGGAAATGTTA
ATCTTCTAAAAGATGTAAGATTCTATAAGTAGATTTGTTGTTTGTGATTT
GTTATAATTTTTATTTCTGGTATGTATATTTTTTTCCCTAAAAGGGTTTC
ATTTTGACAGTAATTATGTTTTATATGGCGCAATAAATTACGCTTGGAGA
TGTTTTTGAAATCCTCGCAGATCCTCCTGGTGAAAAAGAAAACATTTTTT
GGCCGAAAAAATAACGTTTGGATTTTTAGGGAGGTTTTAGGATTGATAAT
ATTTATTTTATAGTTGGAGAAAAGCAAATCTTTTAAATGTTGTACTTTTG
GTGCATCCAGTTTAAAGACTAGATTCCTGGCTACCGGTGATTTTGATGGA
AAACTTGCTATATGGTAAATATAATTTATGATCTCTGTGATATGTAAATT
GAATAAGAAAGGCGATTTAAAGAAAGTTTTGATTTTTATGTCAAATTTGT
GAACAAGTCATTATGGAAATTTATAGATGTTAGCAAAAATACTTGTCCAA
AAGAATATCTGGGATTGAGGGCTTATAAAGCTGAATGGCCATACAGGAAA
AGGAAGAGGAAAAGTTCTCAACAATTTAAAATTTGTTGCAATTTCAGACA
ATAACGACAAGTAGCTATTTGGCATAATAGTTATCTTTTTGTTAACTGGC
CTTCTCGTGATTTTTCACCTCGAAATTGAAATTGATATACTTATACCAAG
GAATTTGTATAGACATTGGATAAACGAAGAAGAGCGAGCATTGTCTTCCA
ATCAGTTCTAATTGTTTCAAAAAACCATTAACATATTCCTATTCGAATTG
AGACATTCTTATTTAGACTGTCACAAAAAAGATGACATTGTAAAGATGTG
CCTATATCTTTTGGAGATTTTTTGAACTCTTTTTGTTTGAGCTAACTTAA
GGGAACTAATAGACTTTTTCATAAAATTACGTCAAGAGCAACACTGACCT
CGTTTTTAGAATATTTCTGATTGTAATCGATTACCAGAGAGGAATTCATA
AAAAGTTTACTCTGTTTATAAATAAAGGTAACTTTTAAAGAGTTAAGGGA
TTTGGTCACCTTGGCAATGGTTTCAAAACGTGGCATGAGTTAGACTGTAA
ATAATTTTTGAAAAGGTTTATTATTAGTTCCCGCGAAAATTACTTCCTTT
AAGGTAAGGGAGAACTTTTTATATAAATGCTGTTATTCTGATTGCTTAAT
CAAAAATCTCAAAAAAGGTGCCGGTGATACCTTTCTATGAGCACATCTTT
TATAATGTCATTTTTTTTGTGTCAAACATTAAATGAATGTCTCAATTCAA
AAGGAAAATGTTAATTGATATTCTAGCTTTGTCCGCAAAAAGGGCATGAG
CTTTATTTTTGAAAGTGATTTTAAGAGAAAATATCTAAAGAAAAAAAAAT
AATTATACAGATTTCTCAAATCCAATGGTGAGAGGCTCTAGCTTTTTCAC
ACATGCTGACCTAACCCACTTAATCGAAAATTAAACAACTTTTGACCATT
TTGATTGACTTTCAAACAGTGTACCGGGAAGTCATCCTTTCTTTATCTTC
ATTTAGGGATCTTGAAAAGCCATCATTACCAGTATACAGCACAAAAGCTC
ACAAAGAAATCATCAATGGTATCGATGGTATTGGAGGTCTGGGGATAGGA
GAAGGAGCTCCGGAACTGGTCACGTGTAGTCGAGATGGTAATTTACGTTT
TATTTGGATGCTTTTATTTCTCCCCTCCAAAATTTGAAAGCGTTCGTTAT
CATACTTTGTCTTCATTTCAGGGTCATCATTCCAGCACCTAGCAATTTTC
AAAAGGGCTAATGAAGCCCATCGGGTTGCATACTATGTTTGCGCCGGAAT
ACTCACAACTAGAAATAATGCATCATGGCCCCTGTGACTCGTTAAGAACT
TTTTAGGAAGATGGTGTAAAATTAAGGTCAACTGGAAATTTTAAGTAGGT
CGAATTTGAAAGTTACATCTCGAAAATCCAGTTGTAATTTGTAATTTTAA
AATTGTCATTTCTATTCGGGATAAGAGTTTATTTGTGGGAAAAATTTCAG
GGTTGTTAAAAGACCTATTCAAAATATTATGCTCGGAAACTAAGCTCAGT
GGATTTGTGATCAGAAATTCATAATGGCGGTCGAAAAACGTGCTCGGAAG
CTCTGCAGGCCTTCCAGCTTGGAAAATGTTTGAGTTTGGGGCTTGTCTTA
CAGAGCTTCTTCTAACTAGGGACGATTTCGGCTGATTTTTCAAAGTGGGA
GTCTTGATTTTTACATTCTCTTCATTCAGGTTCAGTGAAAGTATGGGACC
CTCGTCAGAAAGATATTCCTGTTGCAAATATGGAAGCATCCAATCAAGAC
ATGAAAAGAGATTGTTGGTGCGTCGCCTTTGGTAAGGTTGATTCGTTACC
ATGACAGCAAATTTTATCTCCTGAAAAATAATCGTTTGTACATCCTTAAT
TGTTTATAACCTTTCTAGATATCTTCTTTCAAAACAGATACATTTAAAAT
CCTGGGTATTAAATCTATAAAGCTTTTTAACCCTAAAACCCTTAAAAGGA
TTGTTTTGCTAAAGTTAGTCACCCCTTGTATATCTGGGCTCTGACTTTCC
TGAACTAAATTGGTTGATTAGTCTTGATTGCATAAACTTTTCAAGACTTT
CAAGCTATTCAGACTGTACCCAATCCCCTAATCCCGATGTGTCAAGAACT
TGCCGAATCCTGAGATTTATCACCACTTTAGCATTTCATAGTGATGTAGA
CGATGTAAACTTCTTCTGTTTTGGGCTTATTTCTTAGATAGTGATTTGTG
TTAGACTATAGCATTATCTAATAGTGGTGTAAATCTCTCTCTTTCTTTAT
TTCCAGGGCACTCTTATAATGAAAGCGAGCGAATTGTCTGCGCTGGTTAC
GATAACGGAGATATCAAGATGTTCGATTTACGTAACATGTCCTTAAGATG
GGAAACACATGTAAAAAATGGAGTAAGTTACAGATATCATATTCTTTTAC
ACTATTCCACTAGTCCGCCATATTGGTTTCTTATTTACCTTAGGTTTTCG
AACGTTTCAATTTCAAAGCATTCGAATGGCGCTGTTGACTATTCAGCTTT
ATAAAACTGGACACACTTTCTTTTATATGGGAAGTCCGATTAGCCAAAAT
GAATTTTTTTGCAGAGAATGATCAATTGACTTAAAATTTGGCGGGAATTA
ATTTAATTCTATAATCTCATGGTTGATTGAAATTCGATTGACGTTTTTGC
TTACGTTAATTTGTAATTTCCCGCGAACTTGTAATTTCCCTCCTAGCTNA
TTGGGGCTTGTCTTACAGAGCTTCTTCTAACTAAGGACGACTTTCGGCTG
ATTTTTCAAAGTAGGAGTCTTGATTTTTACATTCTCTTCATTCAGGTTCA
GTGAAAGTATGGGACCCTCGTCAGAAAGATATTCCTGTTGCAAATATGGA
AGCATCCAATCAAGACATGAAAAGAGATTGTTGGTGCGTCGCCTTTGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034276XLOC_034276Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054364-exon-scaffold_242-1575043694:915847..915875TCONS_00054364-exon-scaffold_242-1575043694:915847..915875Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1575043694:906462..906681TCONS_00054364-exon-scaffold_242-1575043694:906462..906681Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1575043694:906112..906212TCONS_00054364-exon-scaffold_242-1575043694:906112..906212Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1575043694:904789..904919TCONS_00054364-exon-scaffold_242-1575043694:904789..904919Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1575043694:902978..903080TCONS_00054364-exon-scaffold_242-1575043694:902978..903080Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1510915933:915847..915875TCONS_00054364-exon-scaffold_242-1510915933:915847..915875Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1510915933:906462..906681TCONS_00054364-exon-scaffold_242-1510915933:906462..906681Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1510915933:906112..906212TCONS_00054364-exon-scaffold_242-1510915933:906112..906212Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1510915933:904789..904919TCONS_00054364-exon-scaffold_242-1510915933:904789..904919Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1510915933:902978..903080TCONS_00054364-exon-scaffold_242-1510915933:902978..903080Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1491911889:915847..915875TCONS_00054364-exon-scaffold_242-1491911889:915847..915875Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1491911889:906462..906681TCONS_00054364-exon-scaffold_242-1491911889:906462..906681Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1491911889:906112..906212TCONS_00054364-exon-scaffold_242-1491911889:906112..906212Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1491911889:904789..904919TCONS_00054364-exon-scaffold_242-1491911889:904789..904919Clytia hemisphaericaexon
TCONS_00054364-exon-scaffold_242-1491911889:902978..903080TCONS_00054364-exon-scaffold_242-1491911889:902978..903080Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:902978..915875 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.44711	1.4084	0.141628	0	1.12469	2.17645	1.25044	0.313736	0	0.25015	0.993392	0.486867	0.339955	0.259276	0	0	0.405041	1.18071	0	1.26923	0.0065509	0.00499176	2.22945	0.635134	0	0	1.16764	1.13824	0.9415	2.97331
Blast
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BLAST of TCONS_00054364 vs. Swiss-Prot (Human)
Match: WDR92 (WD repeat-containing protein 92 OS=Homo sapiens GN=WDR92 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.333e-65
Identity = 114/170 (67.06%), Postives = 136/170 (80.00%), Query Frame = 1 
Query:   73 PQIITHVQKSLNYTLFDAKFVPRSAKFVCVGSKANGSGVIQMYELTHNEMKGNVNLLKDLEKSKSFKCCTFGASSLKTRFLATGDFDGKLAIWDLEKPSLPVYSTKAHKEXXXXXXXXXXXXXXXXAPELVTCSRDGSVKVWDPRQKDIPVANMEASNQDMKRDCWCVAF 582
            PQII H+QK  NYT+FD K+VP SAKFV +G+ A G+GVIQ+YE+ H ++K    LL+++EK+K  KC TFGA+SL+ R+LATGDF G L IW+LE P +PVYS K HKEIIN IDGIGGLGIGEGAPE+VT SRDG+VKVWDPRQKD PVANME    + KRDCW VAF
Sbjct:    7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK----LLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172
The following BLAST results are available for this feature:
BLAST of TCONS_00054364 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
WDR921.333e-6567.06WD repeat-containing protein 92 OS=Homo sapiens GN... [more]
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