TCONS_00054354 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054354
Unique NameTCONS_00054354
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2555

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054354 ID=TCONS_00054354|Name=TCONS_00054354|organism=Clytia hemisphaerica|type=transcript|length=2555bp
ATAAATGTTGCAAATGTCAAAAATGCGTTGATCTAGGCTTAACCTTTAAC
AAACTACATTTACTGTTGGAAATATTGCACACTTTAGCAAACAAAATTTA
CAAGTGGAAAATTATATGGAATTCTTTAGCTTATCCAAAAGTTTTACTAT
TCACAAAATCTttacttgaaattgaaaagaattgAAGTCATGGCGTACGG
TCAAGAACTTCTTTTGGACAGAAcgatttttaaaatgaagaaatcaGCGT
TCCTGATCGACAACTCCCACAAAATGGAGGGACAAAAAGCAAAGGAGAAA
TTAAAGACAAAATGGAAAGATTTGTATTCAAGTTGCAGTTTTGATGGTTT
TCATTACATCTTTGACGAGCGTGGTTTTCTTCGAATCTTTTGGTTATTGA
TGGTCCTGGGTGCAACAGCTCTCAGCATTGTGCTTTTCTATGGTGTCATC
GAAGAATATTATAACTTTAAATCTCACACAAGTATTGAAGAAGTATTAAG
CAATGATAAGGTTGAATTTCCAACTGTAACTATTTGTAATATAAACGCTG
TCTCTAagaggaaaattgaaaaagcagGGTACAATTCAAGTGTAGAGGAA
ATTGTCTCATTTTACCAGGACTTACGAGAAGGTCATTTCAACGCCAATAA
AAGTAATAAGGTTTTGGAAGAGCTGAAAGCGAACGGGTTAACAAAAATGG
GTGATCTTTTGAAACACTTTGAATACACATTTGGTGAGATTATGGAAGAT
TCCGTTTTAAAAGATATAGCACCAAGACCATGTATGTTTAAGGACCGAGA
ATGCAATAAGGATGAATTTACAGAAGTCATTTCTGCCCACTATGGTTTGT
GTTATCAATTCAACTCCATCTACTTGGAAATGAATCGTCTCTATGCAAAC
GAAGCTGGAGAAGGAGCCGGTTTGAGATTATATTTGAACATTGACGAAGA
AGATCTGTTGGTCAGTAATGTTCCATTTACTGGATTACAAGTTTTCGTTC
ATCCCTTTGGAGAGCCGTTTGAATCTGCAATTGCCAGAAGAGTCCCCATC
AGTCCCGGATCAATGAATTATATACATATTGATTACAGACAGTGGGAGTT
ATTAGAATCACCATATGCTTCAGCTTGCGCTTCCAAAAACTACAATCTGG
TCAAGAAAATTGTCCCATACTCACAATCGATGTGCTCGGTCGACTGCACC
ATGTCAAAGATGATGGATAAATGTGGTTGTGTTTCTGAAGAGTTCGCAAA
CCATTTAGAGGATAAAAACAAGACTTGCAAATACAATCAAATCCAATGTG
TCGAACAAATGCTTGGAAATCTCCAACAAATGCTACATACATGCAGAGTC
CAATGTCCCCGGCAATGTTTGGTCACCAAGTATGGAATCTCAACTGGTCA
AACAGCTATGGGAAACTCAAAAGTTTACAAAATGCTGAAACAAAAACACA
ATAAAACCATAGATGAAGGATACGCCTTCATAAATAAAAATGTATTTGGA
ATTGATGTCACATTCTCTGATATCGTCTACTTGAAAGAAACCATGTCACC
TGCTCAAAACTGGATCTCTGTATTGAGTACTATTGGAGGAAGTTTAGGAC
TTGCAATGGGATGTAGTGTTGTCACTTTCATCGAATTTATTGTTTTTGGT
ATTCAAGCGCTTTATTGGTACTGCAAATACAAATTGAGTGACGATTGTAC
GTCCCCACAAAAAGCTAATGCCATACAAACTTAAAAATGACACAAATCTT
TGATCAAAATTCCTTTTTTAGTGAGTTAAGCACCCCTTTTTCCCAAGCCT
CGTGGGACCCCTaccaaaatttgccaaagtaTCGTCCCCTGCGCGAAATT
AATCTAATGTTTATCCTCGCTAGAATGaaataatctgaaaaataaTATGC
ATTTGGCGACTTTTTTCACAAGAACTGATACTTTTGCCTGGATCTTGGCT
GtcatatatatttttcatgatttttagaatCGAATCTAGTTCTTAAGAAA
CTCTTTTTGCTCTGGGCTGAGAAAGAAAATGGATgaattctcaaatatta
tgcattatgcattatgcaatatgcattatgtttcatgcattttggacctg
ccgttTTCTTATTCTTATTTTATACCAGTGGCTCAATTTAGTAATAAATT
AAACGCAGTAGGATTCCTTAGACTTTTagtaacctttttgtttcccTGCC
GTCCATTTAAAAACTACAATTTATACTGTAATGTTGTAAGTAATGCAATG
Tgtgttttcaatttaaaaattgtggtattttataacaaaatttttctttt
tatgtatTTTAAACGTGTATTTTGTAGATTTATCAATAACATCATATAAT
TATTTATCAACTAAAGACCTACATGGTCTCATCCGTTTTAGTAGCTAAAG
AAATACAGTAACTATATATTTTTTACAGATCATGCAGGGTCATTTTATTT
TCCTTTCATTTCTATATGACACTGTGTGTATTCATTTTGACCAGACTGtt
gcaattttaaaatttggaaagCTGATGGTCGTACTCGTTGCTTTTTTGAT
CTTCC
Run BLAST on NCBI

protein sequence of TCONS_00054354-protein

>TCONS_00054354-protein ID=TCONS_00054354-protein|Name=TCONS_00054354-protein|organism=Clytia hemisphaerica|type=polypeptide|length=514bp
MAYGQELLLDRTIFKMKKSAFLIDNSHKMEGQKAKEKLKTKWKDLYSSCS
FDGFHYIFDERGFLRIFWLLMVLGATALSIVLFYGVIEEYYNFKSHTSIE
EVLSNDKVEFPTVTICNINAVSKRKIEKAGYNSSVEEIVSFYQDLREGHF
NANKSNKVLEELKANGLTKMGDLLKHFEYTFGEIMEDSVLKDIAPRPCMF
KDRECNKDEFTEVISAHYGLCYQFNSIYLEMNRLYANEAGEGAGLRLYLN
IDEEDLLVSNVPFTGLQVFVHPFGEPFESAIARRVPISPGSMNYIHIDYR
QWELLESPYASACASKNYNLVKKIVPYSQSMCSVDCTMSKMMDKCGCVSE
EFANHLEDKNKTCKYNQIQCVEQMLGNLQQMLHTCRVQCPRQCLVTKYGI
STGQTAMGNSKVYKMLKQKHNKTIDEGYAFINKNVFGIDVTFSDIVYLKE
TMSPAQNWISVLSTIGGSLGLAMGCSVVTFIEFIVFGIQALYWYCKYKLS
DDCTSPQKANAIQT
Run BLAST on NCBI

transcript from alignment at scaffold_242:777757..784396-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054354 ID=TCONS_00054354|Name=TCONS_00054354|organism=Clytia hemisphaerica|type=transcript|length=6640bp|location=Sequence derived from alignment at scaffold_242:777757..784396- (Clytia hemisphaerica)
ATAAATGTTGCAAATGTCAAAAATGCGTTGATCTAGGCTTAACCTTTAAC
AAACTACATTTACTGTTGGAAATATTGCACACTTTAGCAAACAAAATTTA
CAAGTGGAAAATTATATGGAATTCTTTAGCTTATCCAAAAGTTTTACTAT
TCACAAAATCTTTACTTGAAATTGAAAAGAATTGAAGTCATGGCGTACGG
TCAAGAACTTCTTTTGGACAGAACGATTTTTAAAATGAAGGTATATGCTT
TTCCTAGACGGAGACAGCCATAAAATAGAATGCATCCCTTATCGGGGAAA
ACTTCGTCGGGGAAAAGTGACGAAATTTTGGACAAATGACGAATATTTTC
CCCGACGAAAATTTTCCCCGGCCTTTGGTCTAATTTCTTAGGAAATCGGG
TGTTTTAGAGTACACAAAGCCTTAAAATGTTCTTAATTTTTATGTATTCT
TATCTTCTTTAAAAAACGTGTATGAGATTAAAAACGAGTGAATTCGCTGC
AAGAATTAACCTTTTTGTGACTTGAAAGGTTTATCACACCCCCTTCTCAC
AGACTCCGTAGGATTTTTTCATTCAGTGGGAATAAAAATAACGGACTGAA
ACTTGATGAGGGTTTCAATTCTTTTGTTTTCGACAGAAAATCCAGTGGGG
ATCGGAAAAATAGCATAATATTTTGATTATTTTCAGTGGGAACAAAAATT
GGTCGGAGAATTTTCTACCGCGGGGACGATATTTTGGACAATTGGTGGAT
TGCCTTAGTCTTATCCTCCTTTTGGTCTTGCAACTTGTCAATTTTTTTTG
AAATTTTCAATTTCTAAAGAAGGCTTTAAACTAGTGTAGATGTTATGCGA
AGTACTAGGTACAATGGATAATGGCATATCATGTCTCTTTAAACTTTATT
ATTTCCAAAGTATCTTTAACCAACATGCTTTTGTATAGCACGTTATCTGC
GTTCGAGCTTTAAACCACAAATTCTGTTAAATATTTTTTTTGATGTTATA
TCCACTTTCGGTTACATAAGTATATAGAAAGCGTAAAGTCTATCTAGTAG
TGGTAAATATATTCGACCTCTTATCTTTAAACCCTAAAGCAAGACAAAAA
CTACCGCTATATCTTTACCAAATAAATGTGTTCTATAACTACGATAGAGT
GCCTTTAACTCGAATTTTCCATCGCACTTTTCCAACAACACCGTCACTTT
AGCTTTCTGATTTAGGTTCCTTTTCCAGTTTTGATATATCAGTCAAAAAA
AATTCTATCAAAATAACATTAATTTACTGAAAAAGGTGGTGTTGCCTGAA
AAAGAAATATAATTTTCATTGCCCTCCCAGCGGATTTTATTAAAGCTACT
TCCTATTCATAAAAATTGGTAATTGTTTGGATACGAGGCAAGTGATGTTC
GTGCAGGGGAGGGTACTAAGGTTACGATCTGACGGGTATGTGTCGCCCGA
CTTTCGACCCTTGAATCCTTAGTGGGACTAAAAAGGAGAAAAAATAGGAA
AATTCTGCGATTTTTTCGACCCTTATTGGGACTAATTTGACCAAATTTTG
TTCTTTCAAAGAGCAAAAAGTATTTTTCTGTTTTTCCGACCCTTAGTGGG
ACTGAAATTTAATTTTCTGGTTTTTCCAACCCTTACAGGGACTTTAAGGT
CCCAAAAAGGCACCCTTAAGGGCGGTACATACGCGTATCCTTCACTTGCC
TAAGCCCCCCCGGGTGTTCGTGACGGAATTTTAATAAAAGGTCTATTCAT
TTCTGATGTTCCTGATTCAGAAAATCAAATTATTTCGGGGATTTAATTCT
CTTAGGGGTTAGAAAAGATTACGTTATACACTTTCTAGACATTGGAAAGG
AAAATCTAATGAGTTACTGTTCTTTTTTCTTAGAAATCAGCGTTCCTGAT
CGACAACTCCCACAAAATGGAGGGACAAAAAGCAAAGGAGAAATTAAAGA
CAAAATGGAAAGATTTGTATTCAAGTTGCAGTTTTGATGGTTTTCATTAC
ATCTTTGACGAGCGTGGTTTTCTTCGAATCTTTTGGTTATTGATGGTCCT
GGGTGCAACAGCTCTCAGCATTGTGCTTTTCTATGGTGTCATCGAAGAAT
ATTATAACTTTAAATCTCACACAAGTATTGAAGAAGTATTAAGCAATGAT
AAGGTTGAATTTCCAACTGTAACTATTTGTAATATAAACGCTGTCTCTAA
GAGGAAAATTGAAAAAGCAGGGTACAATTCAAGTGTAGAGGAAATTGTCT
CATTTTACCAGGACTTACGAGAAGGTCATTTCAACGCCAATAAAAGTAAT
AAGGTTTTGGAAGAGCTGAAAGCGAACGGGTTAACAAAAATGGGTGATCT
TTTGAAACACTTTGAATACACATTTGGTGAGATTATGGAAGATTCCGTTT
TAAAAGATATAGCACCAAGACCATGTATGTTTAAGGACCGAGAATGCAAT
AAGGATGAATTTACAGAAGTCATTTCTGCCCACTATGGTTTGTGTTATCA
ATTCAACTCCATCTACTTGGAAATGAATCGTCTCTATGCAAACGAAGCTG
GAGAAGGAGCCGGTTTGAGATTATATTTGAACATTGACGAAGAAGATCTG
TTGGTCAGTAATGTTCCATTTACTGGATTACAAGTTTTCGTTCATCCCTT
TGGAGAGCCGTTTGAATCTGCAATTGCCAGAAGAGTCCCCATCAGTCCCG
GATCAATGAATTATATACATATTGATTACAGACAGGTAACATATTCTTAA
TTTTCATCCTTGAGGTTTCCGTTCATGATCTTACGTAAATATGCTTTCAA
ATGAAGTCATAGTAAGCTCGTGTGCCTTTCTCAATGAATATAATAACAGA
GATATTCCTTTGCAATCATTATCATACACGTCCCATTCTGCATGTAGAAA
GAAAGAACCATTCTAACATTTATGGTCACATACTTCCTTGGTTAGAATTG
TTCTAATAGGATATTGAATTGAGACAAGGGTGTCATTTTCATATCATTCA
TTCACAACCAGTATATATAATCAATCATTTCCTTTGGCTTTTTAGTGGGA
GTTATTAGAATCACCATATGCTTCAGCTTGCGCTTCCAAAAACTACAATC
TGGTCAAGAAAATTGTCCCATACTCACAATCGATGTGCTCGGTCGACTGC
ACCATGTCAAAGATGATGGATAAATGTGGTTGTGTTTCTGAAGAGTTCGC
AAACCATTTAGGTAATTCTGATCCATCTGCTCAACTTAGCTCAACTCTCT
CAAAAACTCTTAGTCGAGATGTGTTGAAACCAAAATAATAATAATTATTT
TGCTTTCCAGGATTTTTAACACCCCTGAAAAGTTTGGTCTACGGTGAAAT
CAATAGCCTGAAATTTTGTGGATGGGCTTTTACCGCAAATGAGTAAAATT
TTGAAAATTTGGATTGAAATAGATTTCAAAAAGTTCAACTCGTTTGGAAA
TGAAACTCATTTGATTAATTTCCATCCTCACTGAGCCTCATTTCCCTTGT
CTTGAGAAAAGGTTTAAAATCTTATACTAAATTTGCAATATTTTTCTCTT
TTATTTACAGAGGATAAAAACAAGACTTGCAAATACAATCAAATCCAATG
TGTCGAACAAATGCTTGGTAAGCACCTCCAAATGTCTTTGTAGTGTTTAA
AAAAATAGGATATAAAAAATCTTTCTTTTTCCCTGAGGCTCATTCCCGAC
TAAATAGAAAAATATTATCAAAGGCATTTAATACATGTATAATACATGTA
AAACGGGCTCTTCCAGAAAAAAACCATTCATGGGGGGTGGAGGATATATT
GTCCAGGGGTAAATATTTGTGTCCAGGGGGTCAATTCGATGCTTGTCCAG
GGGTGAAACACGTGTCCAGGGGGTGAAAAATCGAAATGTCCAGGGGTAGA
TCAAAGACAAAATAATATATCCTCCACCCCCCATGAACGAATTTTTTCTG
GAAGAGCCCAACTTACTTACTGTATGACCAACAATAGTTGAGAATTTTCG
GAGATCTTTTTGCCATTAAAATTTTCTAACATAAAGCGTGTGAAGTAAAA
GGAATATTTTAGTCTTAATCGCAGACCTTTATAGATATACTTCCTATAAG
GAACTATTTTCGCTAGAGGATAGGCAGAAGTCTAGAAACATTTTGATACA
AAGATATTTATAATGAATTTTACTTATGCGTTCTTCCTAATCAGGAAATC
TCCAACAAATGCTACATACATGCAGAGTCCAATGTCCCCGGCAATGTTTG
GTCACCAAGTATGGAATCTCAACTGGTCAAACAGCTATGGGAAACTCAAA
AGTTTACAAAATGCTGAAACAAAAACACAATAAAACCATAGATGAAGGAT
ACGCCTTCATAAAGTAAGTTGATGTTATGATGACTCATCGCTTACCAAAC
ACGATTCTAACCTTCTTACTTTCTGAATCAAAAAGATATGAGCATCCACG
TGCTTCAGTTTTTTTTACATCCTCATAAAACTCGGCAAAATACTTCTTCT
TAGTATTGTCTAATAAGAACTGATTAAATCAAAAATCAATTTTTAATACA
GTTGAAACTCCGTAACTCGAACACCCCGGCTCGGAAACGCACGGAAGACA
CTAATTTGCTCGAGTAATAGAGTAACGTTTATAACGCAGTGTAAACTGTA
AGTGACCATGAGACTTGTTCGAGTTAAGGAGACATTCGAGTTATAGAGGT
TCGAGTTATTGATACTTCACTGTATTTGTTTTTTTTCTCGTAGTAAAAAT
GTATTTGGAATTGATGTCACATTCTCTGATATCGTCTACTTGAAAGAAAC
CATGTCACCTGCTCAAAACTGGATCTCTGTATTGAGTGAGTATTAAACTA
TTTATATTTGTAACTTTAATATGGAAAATTGTGCCTGCTTATAATGCAAA
GTCTTTTTCTGATCTATTCATTCTTGTATTCGTTTAATTTTTTCACATTT
GAGTTAATGATTACATCAGGGTCAAAAATAATGTAGCACCGAAATCAAAT
CAAACGCTCCTTTTGACAGTCCGCAGCATATCTTCTTAACCCTTTGAGTG
CGTTTTTTTTTTGAAAAAGTTGAAATTTTTTTAATTTTTCTTTTGAAACT
TAAAACTCTAAACTGCCATAAAAGCTTGTAGCTTATGATTTAGAAGATGG
TTTTGGTACCATATTAGAAAGCTATTTGTACACTCTTTCTAAAAACATTC
GGTTTATGCCCCTTTAAATCGAGTGGTCAAGAGCTATGACCTAAAGTCTG
AGACTCAGTATTTTGGCTTGTTTTGAACGCATATGCGCGTCTCTAATATG
GTCTAAGGGTTAATTAAGTTAATATTCATCTGGTGGTTGTTGGTGGAGCA
GGGAGTTAGGGAGTCTATACCCTATTCATTTCATACCGAGTTTATGTATG
TGTGCTTTTCAGCGACGGAGACGGTAAGGTTCTGATTTGACTAGATCATG
ACCAACTGAGGACGACGGTAAATCAGTACTTTTACCGTCCTCGATTTTGC
GGGTCAGAATTGTGGGTTTTCCCAAATCACTTCAGTCACTTTACCGTCCT
CAAAAGTGCAAATACATAAACTCGATTATGCTAGACCTGGGAGGTCTTTA
AGAGTCTTTTGTTGTTAACAATATCCACTAGCTTATAATTGTTTGTATTT
TTCTTTCTCAGGTACTATTGGAGGAAGTTTAGGACTTGCAATGGGATGTA
GTGTTGTCACTTTCATCGAATTTATTGTTTTTGGTATTCAAGCGCTTTAT
TGGTACTGCAAATACAAATTGAGTGACGATTGTACGTCCCCACAAAAAGC
TAATGCCATACAAACTTAAAAATGACACAAATCTTTGATCAAAATTCCTT
TTTTAGTGAGTTAAGCACCCCTTTTTCCCAAGCCTCGTGGGACCCCTACC
AAAATTTGCCAAAGTATCGTCCCCTGCGCGAAATTAATCTAATGTTTATC
CTCGCTAGAATGAAATAATCTGAAAAATAATATGCATTTGGCGACTTTTT
TCACAAGAACTGATACTTTTGCCTGGATCTTGGCTGTCATATATATTTTT
CATGATTTTTAGAATCGAATCTAGTTCTTAAGAAACTCTTTTTGCTCTGG
GCTGAGAAAGAAAATGGATGAATTCTCAAATATTATGCATTATGCATTAT
GCAATATGCATTATGTTTCATGCATTTTGGACCTGCCGTTTTCTTATTCT
TATTTTATACCAGTGGCTCAATTTAGTAATAAATTAAACGCAGTAGGATT
CCTTAGACTTTTAGTAACCTTTTTGTTTCCCTGCCGTCCATTTAAAAACT
ACAATTTATACTGTAATGTTGTAAGTAATGCAATGTGTGTTTTCAATTTA
AAAATTGTGGTATTTTATAACAAAATTTTTCTTTTTATGTATTTTAAACG
TGTATTTTGTAGATTTATCAATAACATCATATAATTATTTATCAACTAAA
GACCTACATGGTCTCATCCGTTTTAGTAGCTAAAGAAATACAGTAACTAT
ATATTTTTTACAGATCATGCAGGGTCATTTTATTTTCCTTTCATTTCTAT
ATGACACTGTGTGTATTCATTTTGACCAGACTGTTGCAATTTTAAAATTT
GGAAAGCTGATGGTCGTACTCGTTGCTTTTTTGATCTTCC

Coding sequence (CDS) from alignment at scaffold_242:777757..784396-

>TCONS_00054354 ID=TCONS_00054354|Name=TCONS_00054354|organism=Clytia hemisphaerica|type=CDS|length=10815bp|location=Sequence derived from alignment at scaffold_242:777757..784396- (Clytia hemisphaerica)
GTACTATTGGAGGAAGTTTAGGACTTGCAATGGGATGTAGTGTTGTCACT
TTCATCGAATTTATTGTTTTTGGTATTCAAGCGCTTTATTGGTACTGCAA
ATACAAATTGAGTGACGATTGTACGTCCCCACAAAAAGCTAATGCCATAC
AAACTTAATAAAAATGTATTTGGAATTGATGTCACATTCTCTGATATCGT
CTACTTGAAAGAAACCATGTCACCTGCTCAAAACTGGATCTCTGTATTGA
GAAATCTCCAACAAATGCTACATACATGCAGAGTCCAATGTCCCCGGCAA
TGTTTGGTCACCAAGTATGGAATCTCAACTGGTCAAACAGCTATGGGAAA
CTCAAAAGTTTACAAAATGCTGAAACAAAAACACAATAAAACCATAGATG
AAGGATACGCCTTCATAAAAGGATAAAAACAAGACTTGCAAATACAATCA
AATCCAATGTGTCGAACAAATGCTTGTGGGAGTTATTAGAATCACCATAT
GCTTCAGCTTGCGCTTCCAAAAACTACAATCTGGTCAAGAAAATTGTCCC
ATACTCACAATCGATGTGCTCGGTCGACTGCACCATGTCAAAGATGATGG
ATAAATGTGGTTGTGTTTCTGAAGAGTTCGCAAACCATTTAGAAATCAGC
GTTCCTGATCGACAACTCCCACAAAATGGAGGGACAAAAAGCAAAGGAGA
AATTAAAGACAAAATGGAAAGATTTGTATTCAAGTTGCAGTTTTGATGGT
TTTCATTACATCTTTGACGAGCGTGGTTTTCTTCGAATCTTTTGGTTATT
GATGGTCCTGGGTGCAACAGCTCTCAGCATTGTGCTTTTCTATGGTGTCA
TCGAAGAATATTATAACTTTAAATCTCACACAAGTATTGAAGAAGTATTA
AGCAATGATAAGGTTGAATTTCCAACTGTAACTATTTGTAATATAAACGC
TGTCTCTAAGAGGAAAATTGAAAAAGCAGGGTACAATTCAAGTGTAGAGG
AAATTGTCTCATTTTACCAGGACTTACGAGAAGGTCATTTCAACGCCAAT
AAAAGTAATAAGGTTTTGGAAGAGCTGAAAGCGAACGGGTTAACAAAAAT
GGGTGATCTTTTGAAACACTTTGAATACACATTTGGTGAGATTATGGAAG
ATTCCGTTTTAAAAGATATAGCACCAAGACCATGTATGTTTAAGGACCGA
GAATGCAATAAGGATGAATTTACAGAAGTCATTTCTGCCCACTATGGTTT
GTGTTATCAATTCAACTCCATCTACTTGGAAATGAATCGTCTCTATGCAA
ACGAAGCTGGAGAAGGAGCCGGTTTGAGATTATATTTGAACATTGACGAA
GAAGATCTGTTGGTCAGTAATGTTCCATTTACTGGATTACAAGTTTTCGT
TCATCCCTTTGGAGAGCCGTTTGAATCTGCAATTGCCAGAAGAGTCCCCA
TCAGTCCCGGATCAATGAATTATATACATATTGATTACAGACAGATGGCG
TACGGTCAAGAACTTCTTTTGGACAGAACGATTTTTAAAATGAAGGTACT
ATTGGAGGAAGTTTAGGACTTGCAATGGGATGTAGTGTTGTCACTTTCAT
CGAATTTATTGTTTTTGGTATTCAAGCGCTTTATTGGTACTGCAAATACA
AATTGAGTGACGATTGTACGTCCCCACAAAAAGCTAATGCCATACAAACT
TAATAAAAATGTATTTGGAATTGATGTCACATTCTCTGATATCGTCTACT
TGAAAGAAACCATGTCACCTGCTCAAAACTGGATCTCTGTATTGAGAAAT
CTCCAACAAATGCTACATACATGCAGAGTCCAATGTCCCCGGCAATGTTT
GGTCACCAAGTATGGAATCTCAACTGGTCAAACAGCTATGGGAAACTCAA
AAGTTTACAAAATGCTGAAACAAAAACACAATAAAACCATAGATGAAGGA
TACGCCTTCATAAAAGGATAAAAACAAGACTTGCAAATACAATCAAATCC
AATGTGTCGAACAAATGCTTGTGGGAGTTATTAGAATCACCATATGCTTC
AGCTTGCGCTTCCAAAAACTACAATCTGGTCAAGAAAATTGTCCCATACT
CACAATCGATGTGCTCGGTCGACTGCACCATGTCAAAGATGATGGATAAA
TGTGGTTGTGTTTCTGAAGAGTTCGCAAACCATTTAGAAATCAGCGTTCC
TGATCGACAACTCCCACAAAATGGAGGGACAAAAAGCAAAGGAGAAATTA
AAGACAAAATGGAAAGATTTGTATTCAAGTTGCAGTTTTGATGGTTTTCA
TTACATCTTTGACGAGCGTGGTTTTCTTCGAATCTTTTGGTTATTGATGG
TCCTGGGTGCAACAGCTCTCAGCATTGTGCTTTTCTATGGTGTCATCGAA
GAATATTATAACTTTAAATCTCACACAAGTATTGAAGAAGTATTAAGCAA
TGATAAGGTTGAATTTCCAACTGTAACTATTTGTAATATAAACGCTGTCT
CTAAGAGGAAAATTGAAAAAGCAGGGTACAATTCAAGTGTAGAGGAAATT
GTCTCATTTTACCAGGACTTACGAGAAGGTCATTTCAACGCCAATAAAAG
TAATAAGGTTTTGGAAGAGCTGAAAGCGAACGGGTTAACAAAAATGGGTG
ATCTTTTGAAACACTTTGAATACACATTTGGTGAGATTATGGAAGATTCC
GTTTTAAAAGATATAGCACCAAGACCATGTATGTTTAAGGACCGAGAATG
CAATAAGGATGAATTTACAGAAGTCATTTCTGCCCACTATGGTTTGTGTT
ATCAATTCAACTCCATCTACTTGGAAATGAATCGTCTCTATGCAAACGAA
GCTGGAGAAGGAGCCGGTTTGAGATTATATTTGAACATTGACGAAGAAGA
TCTGTTGGTCAGTAATGTTCCATTTACTGGATTACAAGTTTTCGTTCATC
CCTTTGGAGAGCCGTTTGAATCTGCAATTGCCAGAAGAGTCCCCATCAGT
CCCGGATCAATGAATTATATACATATTGATTACAGACAGATGGCGTACGG
TCAAGAACTTCTTTTGGACAGAACGATTTTTAAAATGAAGGTACTATTGG
AGGAAGTTTAGGACTTGCAATGGGATGTAGTGTTGTCACTTTCATCGAAT
TTATTGTTTTTGGTATTCAAGCGCTTTATTGGTACTGCAAATACAAATTG
AGTGACGATTGTACGTCCCCACAAAAAGCTAATGCCATACAAACTTAATA
AAAATGTATTTGGAATTGATGTCACATTCTCTGATATCGTCTACTTGAAA
GAAACCATGTCACCTGCTCAAAACTGGATCTCTGTATTGAGAAATCTCCA
ACAAATGCTACATACATGCAGAGTCCAATGTCCCCGGCAATGTTTGGTCA
CCAAGTATGGAATCTCAACTGGTCAAACAGCTATGGGAAACTCAAAAGTT
TACAAAATGCTGAAACAAAAACACAATAAAACCATAGATGAAGGATACGC
CTTCATAAAAGGATAAAAACAAGACTTGCAAATACAATCAAATCCAATGT
GTCGAACAAATGCTTGTGGGAGTTATTAGAATCACCATATGCTTCAGCTT
GCGCTTCCAAAAACTACAATCTGGTCAAGAAAATTGTCCCATACTCACAA
TCGATGTGCTCGGTCGACTGCACCATGTCAAAGATGATGGATAAATGTGG
TTGTGTTTCTGAAGAGTTCGCAAACCATTTAGAAATCAGCGTTCCTGATC
GACAACTCCCACAAAATGGAGGGACAAAAAGCAAAGGAGAAATTAAAGAC
AAAATGGAAAGATTTGTATTCAAGTTGCAGTTTTGATGGTTTTCATTACA
TCTTTGACGAGCGTGGTTTTCTTCGAATCTTTTGGTTATTGATGGTCCTG
GGTGCAACAGCTCTCAGCATTGTGCTTTTCTATGGTGTCATCGAAGAATA
TTATAACTTTAAATCTCACACAAGTATTGAAGAAGTATTAAGCAATGATA
AGGTTGAATTTCCAACTGTAACTATTTGTAATATAAACGCTGTCTCTAAG
AGGAAAATTGAAAAAGCAGGGTACAATTCAAGTGTAGAGGAAATTGTCTC
ATTTTACCAGGACTTACGAGAAGGTCATTTCAACGCCAATAAAAGTAATA
AGGTTTTGGAAGAGCTGAAAGCGAACGGGTTAACAAAAATGGGTGATCTT
TTGAAACACTTTGAATACACATTTGGTGAGATTATGGAAGATTCCGTTTT
AAAAGATATAGCACCAAGACCATGTATGTTTAAGGACCGAGAATGCAATA
AGGATGAATTTACAGAAGTCATTTCTGCCCACTATGGTTTGTGTTATCAA
TTCAACTCCATCTACTTGGAAATGAATCGTCTCTATGCAAACGAAGCTGG
AGAAGGAGCCGGTTTGAGATTATATTTGAACATTGACGAAGAAGATCTGT
TGGTCAGTAATGTTCCATTTACTGGATTACAAGTTTTCGTTCATCCCTTT
GGAGAGCCGTTTGAATCTGCAATTGCCAGAAGAGTCCCCATCAGTCCCGG
ATCAATGAATTATATACATATTGATTACAGACAGATGGCGTACGGTCAAG
AACTTCTTTTGGACAGAACGATTTTTAAAATGAAGGTACTATTGGAGGAA
GTTTAGGACTTGCAATGGGATGTAGTGTTGTCACTTTCATCGAATTTATT
GTTTTTGGTATTCAAGCGCTTTATTGGTACTGCAAATACAAATTGAGTGA
CGATTGTACGTCCCCACAAAAAGCTAATGCCATACAAACTTAATAAAAAT
GTATTTGGAATTGATGTCACATTCTCTGATATCGTCTACTTGAAAGAAAC
CATGTCACCTGCTCAAAACTGGATCTCTGTATTGAGAAATCTCCAACAAA
TGCTACATACATGCAGAGTCCAATGTCCCCGGCAATGTTTGGTCACCAAG
TATGGAATCTCAACTGGTCAAACAGCTATGGGAAACTCAAAAGTTTACAA
AATGCTGAAACAAAAACACAATAAAACCATAGATGAAGGATACGCCTTCA
TAAAAGGATAAAAACAAGACTTGCAAATACAATCAAATCCAATGTGTCGA
ACAAATGCTTGTGGGAGTTATTAGAATCACCATATGCTTCAGCTTGCGCT
TCCAAAAACTACAATCTGGTCAAGAAAATTGTCCCATACTCACAATCGAT
GTGCTCGGTCGACTGCACCATGTCAAAGATGATGGATAAATGTGGTTGTG
TTTCTGAAGAGTTCGCAAACCATTTAGAAATCAGCGTTCCTGATCGACAA
CTCCCACAAAATGGAGGGACAAAAAGCAAAGGAGAAATTAAAGACAAAAT
GGAAAGATTTGTATTCAAGTTGCAGTTTTGATGGTTTTCATTACATCTTT
GACGAGCGTGGTTTTCTTCGAATCTTTTGGTTATTGATGGTCCTGGGTGC
AACAGCTCTCAGCATTGTGCTTTTCTATGGTGTCATCGAAGAATATTATA
ACTTTAAATCTCACACAAGTATTGAAGAAGTATTAAGCAATGATAAGGTT
GAATTTCCAACTGTAACTATTTGTAATATAAACGCTGTCTCTAAGAGGAA
AATTGAAAAAGCAGGGTACAATTCAAGTGTAGAGGAAATTGTCTCATTTT
ACCAGGACTTACGAGAAGGTCATTTCAACGCCAATAAAAGTAATAAGGTT
TTGGAAGAGCTGAAAGCGAACGGGTTAACAAAAATGGGTGATCTTTTGAA
ACACTTTGAATACACATTTGGTGAGATTATGGAAGATTCCGTTTTAAAAG
ATATAGCACCAAGACCATGTATGTTTAAGGACCGAGAATGCAATAAGGAT
GAATTTACAGAAGTCATTTCTGCCCACTATGGTTTGTGTTATCAATTCAA
CTCCATCTACTTGGAAATGAATCGTCTCTATGCAAACGAAGCTGGAGAAG
GAGCCGGTTTGAGATTATATTTGAACATTGACGAAGAAGATCTGTTGGTC
AGTAATGTTCCATTTACTGGATTACAAGTTTTCGTTCATCCCTTTGGAGA
GCCGTTTGAATCTGCAATTGCCAGAAGAGTCCCCATCAGTCCCGGATCAA
TGAATTATATACATATTGATTACAGACAGATGGCGTACGGTCAAGAACTT
CTTTTGGACAGAACGATTTTTAAAATGAAGGTACTATTGGAGGAAGTTTA
GGACTTGCAATGGGATGTAGTGTTGTCACTTTCATCGAATTTATTGTTTT
TGGTATTCAAGCGCTTTATTGGTACTGCAAATACAAATTGAGTGACGATT
GTACGTCCCCACAAAAAGCTAATGCCATACAAACTTAATAAAAATGTATT
TGGAATTGATGTCACATTCTCTGATATCGTCTACTTGAAAGAAACCATGT
CACCTGCTCAAAACTGGATCTCTGTATTGAGAAATCTCCAACAAATGCTA
CATACATGCAGAGTCCAATGTCCCCGGCAATGTTTGGTCACCAAGTATGG
AATCTCAACTGGTCAAACAGCTATGGGAAACTCAAAAGTTTACAAAATGC
TGAAACAAAAACACAATAAAACCATAGATGAAGGATACGCCTTCATAAAA
GGATAAAAACAAGACTTGCAAATACAATCAAATCCAATGTGTCGAACAAA
TGCTTGTGGGAGTTATTAGAATCACCATATGCTTCAGCTTGCGCTTCCAA
AAACTACAATCTGGTCAAGAAAATTGTCCCATACTCACAATCGATGTGCT
CGGTCGACTGCACCATGTCAAAGATGATGGATAAATGTGGTTGTGTTTCT
GAAGAGTTCGCAAACCATTTAGAAATCAGCGTTCCTGATCGACAACTCCC
ACAAAATGGAGGGACAAAAAGCAAAGGAGAAATTAAAGACAAAATGGAAA
GATTTGTATTCAAGTTGCAGTTTTGATGGTTTTCATTACATCTTTGACGA
GCGTGGTTTTCTTCGAATCTTTTGGTTATTGATGGTCCTGGGTGCAACAG
CTCTCAGCATTGTGCTTTTCTATGGTGTCATCGAAGAATATTATAACTTT
AAATCTCACACAAGTATTGAAGAAGTATTAAGCAATGATAAGGTTGAATT
TCCAACTGTAACTATTTGTAATATAAACGCTGTCTCTAAGAGGAAAATTG
AAAAAGCAGGGTACAATTCAAGTGTAGAGGAAATTGTCTCATTTTACCAG
GACTTACGAGAAGGTCATTTCAACGCCAATAAAAGTAATAAGGTTTTGGA
AGAGCTGAAAGCGAACGGGTTAACAAAAATGGGTGATCTTTTGAAACACT
TTGAATACACATTTGGTGAGATTATGGAAGATTCCGTTTTAAAAGATATA
GCACCAAGACCATGTATGTTTAAGGACCGAGAATGCAATAAGGATGAATT
TACAGAAGTCATTTCTGCCCACTATGGTTTGTGTTATCAATTCAACTCCA
TCTACTTGGAAATGAATCGTCTCTATGCAAACGAAGCTGGAGAAGGAGCC
GGTTTGAGATTATATTTGAACATTGACGAAGAAGATCTGTTGGTCAGTAA
TGTTCCATTTACTGGATTACAAGTTTTCGTTCATCCCTTTGGAGAGCCGT
TTGAATCTGCAATTGCCAGAAGAGTCCCCATCAGTCCCGGATCAATGAAT
TATATACATATTGATTACAGACAGATGGCGTACGGTCAAGAACTTCTTTT
GGACAGAACGATTTTTAAAATGAAGGTACTATTGGAGGAAGTTTAGGACT
TGCAATGGGATGTAGTGTTGTCACTTTCATCGAATTTATTGTTTTTGGTA
TTCAAGCGCTTTATTGGTACTGCAAATACAAATTGAGTGACGATTGTACG
TCCCCACAAAAAGCTAATGCCATACAAACTTAATAAAAATGTATTTGGAA
TTGATGTCACATTCTCTGATATCGTCTACTTGAAAGAAACCATGTCACCT
GCTCAAAACTGGATCTCTGTATTGAGAAATCTCCAACAAATGCTACATAC
ATGCAGAGTCCAATGTCCCCGGCAATGTTTGGTCACCAAGTATGGAATCT
CAACTGGTCAAACAGCTATGGGAAACTCAAAAGTTTACAAAATGCTGAAA
CAAAAACACAATAAAACCATAGATGAAGGATACGCCTTCATAAAAGGATA
AAAACAAGACTTGCAAATACAATCAAATCCAATGTGTCGAACAAATGCTT
GTGGGAGTTATTAGAATCACCATATGCTTCAGCTTGCGCTTCCAAAAACT
ACAATCTGGTCAAGAAAATTGTCCCATACTCACAATCGATGTGCTCGGTC
GACTGCACCATGTCAAAGATGATGGATAAATGTGGTTGTGTTTCTGAAGA
GTTCGCAAACCATTTAGAAATCAGCGTTCCTGATCGACAACTCCCACAAA
ATGGAGGGACAAAAAGCAAAGGAGAAATTAAAGACAAAATGGAAAGATTT
GTATTCAAGTTGCAGTTTTGATGGTTTTCATTACATCTTTGACGAGCGTG
GTTTTCTTCGAATCTTTTGGTTATTGATGGTCCTGGGTGCAACAGCTCTC
AGCATTGTGCTTTTCTATGGTGTCATCGAAGAATATTATAACTTTAAATC
TCACACAAGTATTGAAGAAGTATTAAGCAATGATAAGGTTGAATTTCCAA
CTGTAACTATTTGTAATATAAACGCTGTCTCTAAGAGGAAAATTGAAAAA
GCAGGGTACAATTCAAGTGTAGAGGAAATTGTCTCATTTTACCAGGACTT
ACGAGAAGGTCATTTCAACGCCAATAAAAGTAATAAGGTTTTGGAAGAGC
TGAAAGCGAACGGGTTAACAAAAATGGGTGATCTTTTGAAACACTTTGAA
TACACATTTGGTGAGATTATGGAAGATTCCGTTTTAAAAGATATAGCACC
AAGACCATGTATGTTTAAGGACCGAGAATGCAATAAGGATGAATTTACAG
AAGTCATTTCTGCCCACTATGGTTTGTGTTATCAATTCAACTCCATCTAC
TTGGAAATGAATCGTCTCTATGCAAACGAAGCTGGAGAAGGAGCCGGTTT
GAGATTATATTTGAACATTGACGAAGAAGATCTGTTGGTCAGTAATGTTC
CATTTACTGGATTACAAGTTTTCGTTCATCCCTTTGGAGAGCCGTTTGAA
TCTGCAATTGCCAGAAGAGTCCCCATCAGTCCCGGATCAATGAATTATAT
ACATATTGATTACAGACAGATGGCGTACGGTCAAGAACTTCTTTTGGACA
GAACGATTTTTAAAATGAAGGTACTATTGGAGGAAGTTTAGGACTTGCAA
TGGGATGTAGTGTTGTCACTTTCATCGAATTTATTGTTTTTGGTATTCAA
GCGCTTTATTGGTACTGCAAATACAAATTGAGTGACGATTGTACGTCCCC
ACAAAAAGCTAATGCCATACAAACTTAATAAAAATGTATTTGGAATTGAT
GTCACATTCTCTGATATCGTCTACTTGAAAGAAACCATGTCACCTGCTCA
AAACTGGATCTCTGTATTGAGAAATCTCCAACAAATGCTACATACATGCA
GAGTCCAATGTCCCCGGCAATGTTTGGTCACCAAGTATGGAATCTCAACT
GGTCAAACAGCTATGGGAAACTCAAAAGTTTACAAAATGCTGAAACAAAA
ACACAATAAAACCATAGATGAAGGATACGCCTTCATAAAAGGATAAAAAC
AAGACTTGCAAATACAATCAAATCCAATGTGTCGAACAAATGCTTGTGGG
AGTTATTAGAATCACCATATGCTTCAGCTTGCGCTTCCAAAAACTACAAT
CTGGTCAAGAAAATTGTCCCATACTCACAATCGATGTGCTCGGTCGACTG
CACCATGTCAAAGATGATGGATAAATGTGGTTGTGTTTCTGAAGAGTTCG
CAAACCATTTAGAAATCAGCGTTCCTGATCGACAACTCCCACAAAATGGA
GGGACAAAAAGCAAAGGAGAAATTAAAGACAAAATGGAAAGATTTGTATT
CAAGTTGCAGTTTTGATGGTTTTCATTACATCTTTGACGAGCGTGGTTTT
CTTCGAATCTTTTGGTTATTGATGGTCCTGGGTGCAACAGCTCTCAGCAT
TGTGCTTTTCTATGGTGTCATCGAAGAATATTATAACTTTAAATCTCACA
CAAGTATTGAAGAAGTATTAAGCAATGATAAGGTTGAATTTCCAACTGTA
ACTATTTGTAATATAAACGCTGTCTCTAAGAGGAAAATTGAAAAAGCAGG
GTACAATTCAAGTGTAGAGGAAATTGTCTCATTTTACCAGGACTTACGAG
AAGGTCATTTCAACGCCAATAAAAGTAATAAGGTTTTGGAAGAGCTGAAA
GCGAACGGGTTAACAAAAATGGGTGATCTTTTGAAACACTTTGAATACAC
ATTTGGTGAGATTATGGAAGATTCCGTTTTAAAAGATATAGCACCAAGAC
CATGTATGTTTAAGGACCGAGAATGCAATAAGGATGAATTTACAGAAGTC
ATTTCTGCCCACTATGGTTTGTGTTATCAATTCAACTCCATCTACTTGGA
AATGAATCGTCTCTATGCAAACGAAGCTGGAGAAGGAGCCGGTTTGAGAT
TATATTTGAACATTGACGAAGAAGATCTGTTGGTCAGTAATGTTCCATTT
ACTGGATTACAAGTTTTCGTTCATCCCTTTGGAGAGCCGTTTGAATCTGC
AATTGCCAGAAGAGTCCCCATCAGTCCCGGATCAATGAATTATATACATA
TTGATTACAGACAGATGGCGTACGGTCAAGAACTTCTTTTGGACAGAACG
ATTTTTAAAATGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034273XLOC_034273Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054354-proteinTCONS_00054354-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054354-exon-scaffold_242-1575043694:784157..784396TCONS_00054354-exon-scaffold_242-1575043694:784157..784396Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1575043694:781662..782513TCONS_00054354-exon-scaffold_242-1575043694:781662..782513Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1575043694:781186..781351TCONS_00054354-exon-scaffold_242-1575043694:781186..781351Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1575043694:780780..780836TCONS_00054354-exon-scaffold_242-1575043694:780780..780836Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1575043694:780034..780202TCONS_00054354-exon-scaffold_242-1575043694:780034..780202Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1575043694:779562..779653TCONS_00054354-exon-scaffold_242-1575043694:779562..779653Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1575043694:777757..778735TCONS_00054354-exon-scaffold_242-1575043694:777757..778735Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:784157..784396TCONS_00054354-exon-scaffold_242-1510915933:784157..784396Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:781662..782513TCONS_00054354-exon-scaffold_242-1510915933:781662..782513Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:781186..781351TCONS_00054354-exon-scaffold_242-1510915933:781186..781351Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:780780..780836TCONS_00054354-exon-scaffold_242-1510915933:780780..780836Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:780034..780202TCONS_00054354-exon-scaffold_242-1510915933:780034..780202Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:779562..779653TCONS_00054354-exon-scaffold_242-1510915933:779562..779653Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1510915933:777757..778735TCONS_00054354-exon-scaffold_242-1510915933:777757..778735Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:784157..784396TCONS_00054354-exon-scaffold_242-1491911889:784157..784396Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:781662..782513TCONS_00054354-exon-scaffold_242-1491911889:781662..782513Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:781186..781351TCONS_00054354-exon-scaffold_242-1491911889:781186..781351Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:780780..780836TCONS_00054354-exon-scaffold_242-1491911889:780780..780836Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:780034..780202TCONS_00054354-exon-scaffold_242-1491911889:780034..780202Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:779562..779653TCONS_00054354-exon-scaffold_242-1491911889:779562..779653Clytia hemisphaericaexon
TCONS_00054354-exon-scaffold_242-1491911889:777757..778735TCONS_00054354-exon-scaffold_242-1491911889:777757..778735Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:777757..784396 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.15688	1.37044	0.218314	0.213586	26.3965	16.9479	0.993173	1.47247	0.626395	0.359654	0	0.682641	3.25702	1.81651	2.43929	0	1.13104	0	0	0.207354	1.86033	0	0.289514	0.454188	0.331143	0.390666	0	0	0.428017	0.461143
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
Blast
[Close]
BLAST of TCONS_00054354 vs. Swiss-Prot (Human)
Match: ASIC1 (Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC1 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 7.765e-26
Identity = 119/472 (25.21%), Postives = 204/472 (43.22%), Query Frame = 1 
Query:  328 SSCSFDGFHYIFD-ERGFL-RIFWLLMVLGATALSIVLFYGVIEEYYNFKSHTSIEEVLSNDKVEFPTVTICNIN-----AVSKRKIEKAGYNSSVEEIVSFYQDLREGHFNANKSNKVLEEL--KAN--GLTKMGDLLKHFEYTFGEIMEDSVLKDIAPRPCMFKDRECNKDEFTEVISAHYGLCYQFNSIYLEMNRLYANEAGEGAGLRLYLNIDEEDLL-----VSNVPF-TGLQVFVHPFGEP-FESAIARRVPISPGSMNYIHIDYRQWELLESPYASACASKNYNLVKKIVPYSQSMCSVDCTMSKMMDKCGCVSEEFANHLEDKNKTCKYNQI-QCVEQMLGNLQQMLHTCRVQCPRQCLVTKYGISTGQTAMGNSKVYKMLKQKHNKTIDEGYAFINKNVFGIDVTFSDIVYLKETMSPAQNWISVLSTIGGSLGLAMGCSVVTFIEFIVFGIQALYWYCKYKL 1686
            SS +  G  +IF  ER  L R  W L  LG+ A+ + +    ++ Y+++   T ++EV ++ ++ FP VT+CN+N      VSK  +  AG      E+++   +  E         K LE L  KAN          ++ F    G  + D +L       C F+   C+ ++F +V+   YG CY FNS      RL   + G G GL + L+I +++ L          F  G++V +H   EP F   +     ++PG   ++    ++   L  P+ +  A    + +     YS + C +DC    +++ C C       H+      C   Q  +C +  L  L +      V C   C +T+YG       + +    K L +K NK+      +I +N+  +D+ F  + Y       A     +L  IGG +GL +G S++T +E   +  + +    K+KL
Sbjct:   23 SSSTLHGLAHIFSYERLSLKRALWALCFLGSLAVLLCVCTERVQYYFHYHHVTKLDEVAAS-QLTFPAVTLCNLNEFRFSQVSKNDLYHAG------ELLALLNNRYEIPDTQMADEKQLEILQDKANFRSFKPKPFNMREFYDRAGHDIRDMLLS------CHFRGEVCSAEDF-KVVFTRYGKCYTFNSGRDGRPRLKTMKGGTGNGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLG--FGVAPGFQTFVACQEQRLIYLPPPWGTCKAVTMDSDLDFFDSYSITACRIDCETRYLVENCNCR----MVHMPGDAPYCTPEQYKECADPALDFLVEKDQEYCV-CEMPCNLTRYGKELSMVKIPSKASAKYLAKKFNKS----EQYIGENILVLDIFFEVLNYETIEQKKAYEIAGLLGDIGGQMGLFIGASILTVLELFDYAYEVI----KHKL 465
The following BLAST results are available for this feature:
BLAST of TCONS_00054354 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ASIC17.765e-2625.21Acid-sensing ion channel 1 OS=Homo sapiens GN=ASIC... [more]
back to top