TCONS_00054326 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054326
Unique NameTCONS_00054326
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length155

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054326 ID=TCONS_00054326|Name=TCONS_00054326|organism=Clytia hemisphaerica|type=transcript|length=155bp
ATTTTTAATTTCAGGATTATGAAAAAGATAATAAAAGGTTTAGTAGCATT
AGAAGTTGTTGCTGTTCTGGGCACTTATCACGTGTGGCACTCAATGAACA
CAGACCAaaATTACAGAAAGTGGATGCATACAAATTATCCCTCTGTTTTA
aaagg
Run BLAST on NCBI

transcript from alignment at scaffold_242:300795..301244-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054326 ID=TCONS_00054326|Name=TCONS_00054326|organism=Clytia hemisphaerica|type=transcript|length=450bp|location=Sequence derived from alignment at scaffold_242:300795..301244- (Clytia hemisphaerica)
ATTTTTAATTTCAGGATTATGAAAAAGATAATAAAAGGTTTAGTAGCATT
AGAAGTTGTTGCTGTTCTGGGCACTTATCACGTGTGGCACTCAATGAACA
CAGACCAAAGTAAGAATTTCTTTTTTGCTAGAAACTCTTACCTTGATTTT
AAAAATGGTTTTTCCAATTTCTATTGATATAAAAAAGTGAGTGGATCAGA
AATCTTCGATTGGAAAAGAGATTTTCTATCATTATACTTTAAAACTTTGG
AACAGAATCACCAAAATTTATCGGATGTGTATTGGCATTTATTATATTTA
ATAAATTTTGATCTTATAAAAATAAAATGTTTTTACAATTTTTGTTGAAA
TCATTCAGGAGGAACAACCAATTTGATTATTTTATTATATGATGCTTTTT
TCAGATTACAGAAAGTGGATGCATACAAATTATCCCTCTGTTTTAAAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034257XLOC_034257Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054326-exon-scaffold_242-1575043694:301136..301244TCONS_00054326-exon-scaffold_242-1575043694:301136..301244Clytia hemisphaericaexon
TCONS_00054326-exon-scaffold_242-1575043694:300795..300840TCONS_00054326-exon-scaffold_242-1575043694:300795..300840Clytia hemisphaericaexon
TCONS_00054326-exon-scaffold_242-1510915933:301136..301244TCONS_00054326-exon-scaffold_242-1510915933:301136..301244Clytia hemisphaericaexon
TCONS_00054326-exon-scaffold_242-1510915933:300795..300840TCONS_00054326-exon-scaffold_242-1510915933:300795..300840Clytia hemisphaericaexon
TCONS_00054326-exon-scaffold_242-1491911889:301136..301244TCONS_00054326-exon-scaffold_242-1491911889:301136..301244Clytia hemisphaericaexon
TCONS_00054326-exon-scaffold_242-1491911889:300795..300840TCONS_00054326-exon-scaffold_242-1491911889:300795..300840Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:300795..301244 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054326 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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