TCONS_00054274 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054274
Unique NameTCONS_00054274
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length8316

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054274 ID=TCONS_00054274|Name=TCONS_00054274|organism=Clytia hemisphaerica|type=transcript|length=8316bp
aagtTAGCGAAACATCCTCTAGCGGTTTGTCCTCAACTTTAAGGAACACA
AAATTGTCTTTGGGTTTTGATGGGATATTACTCCTGGTCACTTGTCCCAT
ATCGGCGTACGGATCACGGGAGTTTTTCCCGGCGTATTTATGTAACGAAT
GCTTCTTGTCCCCTCGGTCAGGTGCTGAGGAGCCGGTCGATGCGTACGCA
CTTTCGAGTTTTGAGAACCCCCCACTTGGTTTTGCATGCTCCGTTTTCTT
TTTCTGTTCCTGTGGTTTGTCCGGTTTATAATGTGTCCCGGTACTGTCCG
AAGTTAAACGACCCATCAAATAATCGGTCATATCTTCATTATTGACGTTA
CTGTTAGGATCACCATtttctgtttgttgtttgttctCTTCGCTAGCTTT
GTCACCAGACTCTTTTTCTCCTTCTTTTCCTGCTTTTGATTCGTCAACAG
GATTAGGTTTTGACACGTCTTCAACAGGGCTTGGATTGCTGTTCAATGAG
TCAGTGGAGACCCCCTTCGAAGAGGGATCTTCTTTTGCTTTCTCAGAGTT
CGATTCTGAATTCTCAGCTTTTGACGGATCTTTATCAGCTGTAGTATCag
agttttgtttttgaagtgaTTCCCCTGTATCTCCTCCTTCTTGTTGATTC
TTTTCGTTATTTTCGATCAATTTGGAGACTTCCTTGCTCTCCTTTTCTTT
TGTGGCATTTCCTTCTTTGTTTTCCTCTTTCGCCCCCTCCTGTTTTGCGT
TCTCCCCTTCTTTAGCGGAATCACTTGAAGGATTCCCTGAAGGGCCATTC
CCTTGCTGCTGTGCATCTTGGGATCCAGTATTTCCATTGGAGCTATCACT
GTTGAAATTATTAATGGAAGAATAAGCTGCTTCGGCTTCCTTTGCTGCCA
TCTTTGCTTGTTCCTCTTTAGCAagcatttcttttgttttatctacttca
ctttcttttgcattttcttcttttactcCATCCTCCTTGTGCTCTTCCTT
TGCATTCTCTTTCGTAGCGTCTTCACTTTGTTTAGCTCCTTGGTCTGTGG
ACCCCTCTTTTGGACCTTGGTCAGTGGATCCCTCCTTTGGTCCCTGGTCT
GTTGACTCCTCTTTTGGACCCTGGTCTGAAGAACCTTCTTGTTTCGCACC
TTGATCGCTTGATCCACTCTCTTGTTTCATAGCCTCACCATTAGAAcctt
cattttgtttttgtccTTCTTCACTAGAGTTTTGCTTGGGAGCATCAGAA
TTATCCTGTGTTGGCCCTTGTTCGGCAGTTGCTTGATCTTTTGATTCATC
CTGTTTTGGAGAATCTTCTTTGGACCCTTCTTCTTTAGAAAATTCTTTCG
AAGATTCTTGTTTCGAGTCGTTCTCATTATGCGCTTCCTGTGCAGCTTTT
TGGTCATTGCCTTTCGATTGCCCGTCTTTTGGACCCTCTTGTTGCCCTTT
CTCTTCATTCGCACTTTCGCTTTTTGTGTTTTCCTCTTTAGGGTTTTCCT
GCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAAGTGTCTTCTTTA
GGGTTTTCCTGCTTCGAAGCGTCTTCTTTGGGGTTTTCCTGCTTCGAAGC
ATCTTCGCTGGGGCTTTCCTGCTTCGAGGCGTCTTCTTTGGGGCTTTCCT
GTTTCGAAGTGTCTTCTTTAGGGCTTTCCTGCTTCGAAGCATCTTCTTTA
TTCTCCTCCTTTGATCCTCCCTCTTTGGAAGAGTTCTCCTTATTCTCCTC
CTGGGTGTTTCCTTGAGATTCAGGTGTCTTATCATCCAACTTGGACCCAC
CATCGCTCTGTCCTTGCATCGCATTCTTCAAATTATCATCTTCATATTCA
GCGCATTCAATTTCCTGACGTTTGGAATCTTCACTCGGTGTTCCTATCAT
CACATATGGATCCTTAAGAGCCTTCGGGATTTGAACTTCCTTATGGCGCT
TTTTACATTTGCTTTTGTCAATTTGACTTTTTCTTGAAGGATGCTTCatt
gattttcttttagaaGATAAAGAAGACCTTTTCTTACCACCGATATCACT
ATAAAGGCGTTTCACTTCTTTGCCGACGTTTTTAGATAATGAATCCTCGT
CTTCTTCCACGGCAGGATGAACTTTCGATTTCTCAGTAGCAATGGCCTTC
TCAAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCTTGGTGTAGCTTT
GACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTTTAGCTTTCAGTT
TTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTATGGATCACTGGTG
TCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAACTCGCTTATACC
ATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCGAGGCCCTAGCTT
CACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTAGCTGTCTTTTCG
TGTCGAGCTTCGTTTTGAGTCAACCCAACGGATGTTCCGAGATCTGCGTA
AGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGTATCGTTTGTGGT
TTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATGAAAAGATAAGGA
TCCTTTAAGAGCTTTTGCCTTGCTTTCTCAatgtttgtttgatttgaagC
GACATCACTGCGCTTCTGGTCGTTAACAGCCGATCCTAACAAAACATATG
GATCCTTGATCGTATTTTTATTGCCAACAACCTTAGTTTCGTTTGAGGCA
ACATCGCTACGTTTTTGATCATCAACAGTGGACCCTATCATAACATAAGG
ATCTTTAATAATATTCTTAttgttggctgatttagtttCGTTTGAGGCAA
CATCGCTCCGTTTTTGGTCATTTACGGCCGAACCAATAAAAACATAGGGA
TCCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGAC
GTCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGGAT
CCTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGACG
TCGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGGATC
CTTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGACGT
CGCTACGTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGGATCC
TTGatgatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGACGTC
GCTACGTTTTTGGTCGTCAACAGCTGAACCAATCAAAACATAAGGATCCT
TGATGATATTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTACTTCG
CTCCGTTTTTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGATCCTT
GATGATATTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTACTTCGC
TCCGTTTTTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGATCATTg
atgatgttcttattttcagcggCCTTCGTTTGGTTTGACTGTTGAGTTTC
ACTGCGTCTTCGACTATCCACTGTGGAGCCAATTAAAACATAAGGGTCCT
TAATGACGTTGCCTGCTGATTTCGTTTGGTTTGCTGCAACCCCGCTGCGT
TTTCGATCATCAGCTAAGACAGATCCGACTAAAGTATCAGGTTTATAGTA
TTTCTTATCTTCCAAATCGTCAGGTTGTGTCAACTTATGTTGTGGGCTAA
TTCCTTTGGTGGTGGCTTTATCGACACGATCTCTCTTGCGGCCGATATCA
GCGTACGGGTCaattttgactgcttttacatTCGTGGACTTTTTGCTACC
CTTTGATGGGTGTTTATCCAtactatttctttttttaccgATGTCAGAGT
AGGGGTCCTTACCGTTGATTTGATTACTGACTGTTTCTTTCGAATCTTTT
GATTCCGGTGATTTTAGTTTCATCAACAGAGGGAAGATTCCTTGGAAAAT
ACTCGGTTCAACTTGATCTCTACCAGCATTGGAAACTTCAGCCGGATGTT
GAGGAAGGTAGACACGTTTATGGGCCTTTTTCGTGATTATGTGTTTCTTA
GAAGCAGGGTGGTGGTGATTCTTCTTGCTAATTGTGTGTCTTTTAACAGA
CTTCCTCTTCTTGATGAAATGTCTTTTGACGTGTTTCGCTTTCTTCACCA
CGGATCTTTTAGTAGTTTTCGTTCTCTTGTTCGTATGTGGTTTGGTAGGC
TTAGCTCGTTTGCTACCCAAATCAGAGTAAGGATCACCATAGTGGGTCAG
TGGTTTAGATTCCTTTACTTTTGATGGATTCACAAAGTTGCAATCATCAT
CTCTCTTGGAAGCTTCATTTCCAATCATTTCATAAGGCTCACTGCAACTT
AAAAACCGTTTCGTGATTTCTGCTGATCGCCTGCTACGTTTATTGATCTT
GGCTTTCAGTGGAGTTTTAGTCGGGTCTTGGCTTCGTTTGGTCGCGACAG
TTGATGTGACGCTTTCTCCGACATCTAAATAAGGATCACGTCCCTGGTTT
ACACTTTTTTGGGGTGCTTTAAATTCATGCGTTTTAGAAGCATCATTATT
CTTGGAGCTTTCTTGTTTAGCTCGTTTGGTAGGGTTCGGTGAGGAGGCCC
CTATCTCCAGGTAAGGATCCGAATTTTTCGCATTGGTTTTCACCTTGGAT
GCAATCGCTTGCTGCCCAAATACTGGTAGTGAGCCTTTGGAGGTCTCTTC
CGATTGGGTAGAATTTGACTTTGGAGCAGAATTTGTCTGTTCTTCGCTAG
CCTCGGGAAGTTTATGTCGTAGATTAGCATAAGGGTCGGAAGAAGGGTCT
TGTGAGAGAGTTTGAGTTGAGTCGCCTTTTGAAAGTGTTTGACTTGAAAC
ACCATTCATTTCATTCTTGATTTGTGCGTTCGATTTATTGAGAGCACGAA
GCAATTCTTCAGTCTTGGCAAGTGCTTGGTCAACTTCTCCTTCTTCGTCT
TGTCCTTTCAAATTTGCTTGATTATCCTCTTTCTTCTTCTTGAGAACTTT
CTCGTTTCCCTCCTTCAATTTGTCACTCAATTCTTTTACTCTCTCCATAA
TCTTTGCTCCTTTCTCTTCTTCACCCTCTCCTTTATCCTCCTCCTTCTCT
TTATTTGATTCACTCGTTTCATCCTCGTTCGTCTTCTTCAGTGAATCTCC
TTCTTCATGATTCGCTTTTTTCAAAACACTATCAGCCAATGAAACATCTT
TTTCCAAACGTGGATCCATGTGTAAAGTTGCGTTGCTACCAGACACTGGA
CCCGCCATGTTTTGAGTTACATTTGATACAGTTTTGTCAGTCACCGATTT
ATCAACAACATTCGACTTGCTGTCACTGTCACCCTTCTCACCCCAGAACT
TCGAGCTCTCTCCAACATCTGCGTAAGGATCACTAAATTGATGTTCAGAT
TTCGTAGACGCTATCTGATGTGTGTCAAACGATTCTTTAAGTTGCTTTTG
CGCTTCAAGTGCAAGTGATGACTCTGGTTGAGTGTTGCCCTCAATGTTCG
AATTCTCTGCATTCTTACCTAGCAAGTGAACTTGTTTCTGATTAGTTGCT
CCCTCTTTTAGTTCTTCTTTACTCTCCTTAGAAGTTTCTTCGGAAAGTTC
AAACTCCTTAGCTTTCATCATTTCTTTACCACTAATCTTCGATTGCACAT
CGTGATCACCCTCTTCGCCATCAGATTTGGCAAACTCCTtcgatttttct
ttcttctttttcgaaTCATCTTTATCTTCGTCATCTTTTGGCGGCTTCTG
ATCACCTGGTATTATTTTTGGAGGTAGAACTTTACCAATCGACTTATAAG
GATCTTTTGCGTACGATTTCACACCTTGTATGTTTTCCATAGACGTTGGC
AATTTCGCTTTCTCTGCAATCTTCTTGAAATCAGTAACCTGGACTTGTTC
TTTCTTTTCTGCGTCATCTCTCGAATAAACACTTGTTTCCTGGTTTCCAT
CAGCACCTGGACTGGTTTCTTCCAGCTTACGCTTACTTCCTTTGACAGGC
CGTGCGTTGATGCTTTTCAAGACAATGCTCTTTGAGACAgctttaaattt
cgatttaagACCAGCTTTCGATACAATTCCACTCTTCAAAGAAGCTTTAA
TACCTGTTGGTGCTATTCTGGTCTTTGTTATCGAAGCTCTACTTTTCACA
GTCGTAATTTTGTTCTTTCTACGGCTCAGCTTTGCCATTCTGCTTCGTTT
CTCATTCTTGACGTTTTTCTTGTGATTCTTTTTAGAGAATGTGGAGCCTT
TCAATGGTTCACTTGGTGCACTACCTATGTCCGAAAAAGGATCTCTTTTA
TGTCCGGTAGTTTTCTTCGGTCTACCAATTACCTTTTGTCGCTTTTGCTT
CTTTGAGTGTTTGGGCATGCGGCTCCGTTTACTCTTCTTGTTTTTACGAG
ACACCTTTCCTCTTTTCGAGACTTGCTTACGtgatgtttttctttccctc
tttgCGCCTTTCTTTTGATTAACTTTGGTTGGTAGCCTGTGTCTCTTGTT
CCCGATATCAGCGAAAGGGTCTTTCTTAATAGTGGCATGAATTTTATTGa
tctttttcaaaggttttaGAGACTTGGTTTGAGCTTTATCAAGTTTACTT
GGTGATTTTGAATGGACTTCGCTTCCATAACCAATATCTGCGAAAGGGTC
ACCAGACTTTTTGTAACCTTTGCTTGTCTGTGTTCGCTTGGATGGCATCC
CAGAGGTGTTTCCTACATCCGCATAAGGGTCTCTTTTGTAGCCTCCTTTA
GTTGAAGGCCTCTTATTTGTATGTGTGCGTTTTGTAGGGACATCAGGAGC
GCTTCCCAGATCAGCATAGGGATCTCTCTTAGTACTCGTGCTAGGCCCAG
GTTTTTTATGGGTTTCTTCACGCTTGACTGGCGTGCTAGGTGCACTTCCT
ACATCTGCGTACGGATCTCGTTTATAAGAACCTTTCTTGGAATACGTTTG
ACTTCGAGCCACGGCAGCTCCCATATCTCCATAAGGGTCGCGCCCATTAT
CGAAAGTTTGAAGAGTTGGTTTCTTTGGCTGTGTGCTTGACTCCACAGCA
CTATCAATATTCGGCATGTTAGCTAGAAATCTGAAAGGTTTCATTTCGAA
CAAACGTTTCCTGGTTTCAGGGTTTATCTTCGCCAACGCTTCTTTGAATT
TAGGTAACGAATCTAACATCATGGTGTGAGGGCTGCTTGGAGCTTCACGC
GGTGCCACATTATTGGCTGCGGTGATCTGTTCCAAAGCTGACGCTGTCGA
ATCGACTGTGGACATTGAAGGGGTATGGGTATGAGAGATTAATGACATTC
CACCTGTGCCTCCGTGCGAGGCATCATCGAAAAGACCCCTCTTAGTACCT
GTTTTGTTAGAGACAGCCCTGATCGATCTTTTCAATCCAGCAGATCCCAT
CGTTGCATAAGGATCTTTGGCCAGTTTCTCATACGATTCCTTTTTGGTCA
TATATTTGTAGGTATCTTCCTCCTTATTTGGTAGGATAGCTCCTACTTCG
ACCTCATCAGTTGCCCGACGCCTTCTTCGGCGGGCTGGTAAACCACCTAC
ATCAGCATATGGGTCGTTAACAACCATCTTGGTTTTGGTAGCTTCCTCTT
TTTGCTCCTGATGGTGTttctgatgatgatgatgtcTTTTCTGGCCGATG
TCTGAATAAGGATCTTTCAATCGATTCAATTGCAACATTgcttcttttgt
ttctttcttcaaTTTATCCAAAGTGTTTTCGTATTCAAGGATCTTTGGTT
TCAAACTTGATTCAGTCATCTCTGGTGATTGTTGTTGAGCTTCAGCTGTT
GATGTGGATGTCATTGCTCTTGTTGCTGCGGACCCTTGGTTACCAGAGAG
GATAGAAGTCAATTCTTTAGGCAAACTGACCACAATTCTCATTCTTTTTC
CACGTTGTTCGATTCTAGATGGTGTTAAATGAATTTCTTTACCACGGTGG
GGCGTTTCCAAGGTGCGCCGGCGGAGATCTGCATACGCTGCTTGAAGCTT
GTTTTGGTCTTCCTTAGTCATTGGTTCGTCCTTAAAGATACGATCTGCGA
TAGTCACTGCAATAGCAGGGTTGTTGGTTATCGCAACAGCTCTGGAGTTT
GATCGTTTACCATCTGGAGGCTTCAAATCAAtcgtgattggttctttcag
cTTGGCTAACGGTCCTTTGGGatttaaagtaattttgagTGGAACCCTGG
GTAATTTACCGAACAGCTCCACAATAGTACTTGGTTGTTGTGTTTGACCG
ACTTCGATTGATTCTC

transcript from alignment at scaffold_242:1538819..1547626+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054274 ID=TCONS_00054274|Name=TCONS_00054274|organism=Clytia hemisphaerica|type=transcript|length=8808bp|location=Sequence derived from alignment at scaffold_242:1538819..1547626+ (Clytia hemisphaerica)
aagtTAGCGAAACATCCTCTAGCGGTTTGTCCTCAACTTTAAGGAACACA AAATTGTCTTTGGGTTTTGATGGGATATTACTCCTGGTCACTTGTCCCAT ATCGGCGTACGGATCACGGGAGTTTTTCCCGGCGTATTTATGTAACGAAT GCTTCTTGTCCCCTCGGTCAGGTGCTGAGGAGCCGGTCGATGCGTACGCA CTTTCGAGTTTTGAGAACCCCCCACTTGGTTTTGCATGCTCCGTTTTCTT TTTCTGTTCCTGTGGTTTGTCCGGTTTATAATGTGTCCCGGTACTGTCCG AAGTTAAACGACCCATCAAATAATCGGTCATATCTTCATTATTGACGTTA CTGTTAGGATCACCATtttctgtttgttgtttgttctCTTCGCTAGCTTT GTCACCAGACTCTTTTTCTCCTTCTTTTCCTGCTTTTGATTCGTCAACAG GATTAGGTTTTGACACGTCTTCAACAGGGCTTGGATTGCTGTTCAATGAG TCAGTGGAGACCCCCTTCGAAGAGGGATCTTCTTTTGCTTTCTCAGAGTT CGATTCTGAATTCTCAGCTTTTGACGGATCTTTATCAGCTGTAGTATCag agttttgtttttgaagtgaTTCCCCTGTATCTCCTCCTTCTTGTTGATTC TTTTCGTTATTTTCGATCAATTTGGAGACTTCCTTGCTCTCCTTTTCTTT TGTGGCATTTCCTTCTTTGTTTTCCTCTTTCGCCCCCTCCTGTTTTGCGT TCTCCCCTTCTTTAGCGGAATCACTTGAAGGATTCCCTGAAGGGCCATTC CCTTGCTGCTGTGCATCTTGGGATCCAGTATTTCCATTGGAGCTATCACT GTTGAAATTATTAATGGAAGAATAAGCTGCTTCGGCTTCCTTTGCTGCCA TCTTTGCTTGTTCCTCTTTAGCAagcatttcttttgttttatctacttca ctttcttttgcattttcttcttttactcCATCCTCCTTGTGCTCTTCCTT TGCATTCTCTTTCGTAGCGTCTTCACTTTGTTTAGCTCCTTGGTCTGTGG ACCCCTCTTTTGGACCTTGGTCAGTGGATCCCTCCTTTGGTCCCTGGTCT GTTGACTCCTCTTTTGGACCCTGGTCTGAAGAACCTTCTTGTTTCGCACC TTGATCGCTTGATCCACTCTCTTGTTTCATAGCCTCACCATTAGAAcctt cattttgtttttgtccTTCTTCACTAGAGTTTTGCTTGGGAGCATCAGAA TTATCCTGTGTTGGCCCTTGTTCGGCAGTTGCTTGATCTTTTGATTCATC CTGTTTTGGAGAATCTTCTTTGGACCCTTCTTCTTTAGAAAATTCTTTCG AAGATTCTTGTTTCGAGTCGTTCTCATTATGCGCTTCCTGTGCAGCTTTT TGGTCATTGCCTTTCGATTGCCCGTCTTTTGGACCCTCTTGTTGCCCTTT CTCTTCATTCGCACTTTCGCTTTTTGTGTTTTCCTCTTTAGGGTTTTCCT GCTTCGAAGCATCTTCGCTGGGGCTTTCCTGCTTCGAAGTGTCTTCTTTA GGGTTTTCCTGCTTCGAAGCGTCTTCTTTGGGGTTTTCCTGCTTCGAAGC ATCTTCGCTGGGGCTTTCCTGCTTCGAGGCGTCTTCTTTGGGGCTTTCCT GTTTCGAAGTGTCTTCTTTAGGGCTTTCCTGCTTCGAAGCATCTTCTTTA TTCTCCTCCTTTGATCCTCCCTCTTTGGAAGAGTTCTCCTTATTCTCCTC CTGGGTGTTTCCTTGAGATTCAGGTGTCTTATCATCCAACTTGGACCCAC CATCGCTCTGTCCTTGCATCGCATTCTTCAAATTATCATCTTCATATTCA GCGCATTCAATTTCCTGACGTTTGGAATCTTCACTCGGTGTTCCTATCAT CACATATGGATCCTTAAGAGCCTTCGGGATTTGAACTTCCTTATGGCGCT TTTTACATTTGCTTTTGTCAATTTGACTTTTTCTTGAAGGATGCTTCatt gattttcttttagaaGATAAAGAAGACCTTTTCTTACCACCGATATCACT ATAAAGGCGTTTCACTTCTTTGCCGACGTTTTTAGATAATGAATCCTCGT CTTCTTCCACGGCAGGATGAACTTTCGATTTCTCAGTAGCAATGGCCTTC TCGAGGTTTTCAATGGTGTTTAACTCCTCTGCAACGCTTGGTGTAGCTTT GACTGCTTTTCCTTTCTCGTGAAACTTCTTCTTTTCTTTAGCTTTCAGTT TTGCTTCTTTTCCTTCCGATTTTGCTTTTGCCACGTATGGATCACTGGTG TCATAAGGCCCGATATGAGATTGTGATGCCCGTGTAAACTCGCTTATACC ATTATGGAGCGATTCCAACTCTTTAGCCGTTGTCTCCGAGGCCCTAGCTT CACCAGCAGCAAGTTTCTCAACCGATTCTGATCCTTTAGCTGTCTTTTCA TGTCGAGCTTCGTTTTGAGTCAACCCAACGGCTGTTCCGAGATCTGCGTA AGGATCAAAAGATCGTTTGGTGACTTTGGTAGAATGGTATCGTTTGTGGT TTTTGGTGACGCTCTTCTTCTCAACTGCTGATCCGATGAAAAGATAAGGA TCCTTTAAGAGCTTTTGCCTTGCTTTCTCAATGTNGGCCTTCTCAAGGTT TTCAATGGTGTTTAACTCCTCTGCAACGCTTGGTGTAGCTTTGACTGCTT TTCCTTTCTCGTGAAACTTCTTCTTTTCTTTAGCTTTCAGTTTTGCTTCT TTTCCTTCCGATTTTGCTTTTGCCACGTATGGATCACTGGTGTCATAAGG CCCGATATGAGATTGTGATGCCCGTGTAAACTCGCTTATACCATTATGGA GCGATTCCAACTCTTTAGCCGTTGTCTCCGAGGCCCTAGCTTCACCAGCA GCAAGTTTCTCAACCGATTCTGATCCTTTAGCTGTCTTTTCGTGTCGAGC TTCGTTTTGAGTCAACCCAACGGATGTTCCGAGATCTGCGTAAGGATCAA AAGATCGTTTGGTGACTTTGGTAGAATGGTATCGTTTGTGGTTTTTGGTG ACGCTCTTCTTCTCAACTGCTGATCCGATGAAAAGATAAGGATCCTTTAA GAGCTTTTGCCTTGCTTTCTCAatgtttgtttgatttgaagCGACATCAC TGCGCTTCTGGTCGTTAACAGCCGATCCTAACAAAACATATGGATCCTTG ATCGTATTTTTATTGCCAACAACCTTAGTTTCGTTTGAGGCAACATCGCT ACGTTTTTGATCATCAACAGTGGACCCTATCATAACATAAGGATCTTTAA TAATATTCTTAttgttggctgatttagtttCGTTTGAGGCAACATCGCTC CGTTTTTGGTCATTTACGGCCGAACCAATAAAAACATAGGGATCCTTGat gatattcttattttcagcgGCTTTCGTTTGGTTTGACGCGACGTCGCTAC GTTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGGATCCTTGatg atattcttattttcagcgGCTTTCGTTTGGTTTGACGCGACGTCGCTACG TTTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGGATCCTTGatga tattcttattttcagcgGCTTTCGTTTGGTTTGACGCGACGTCGCTACGT TTTTGGTCATTTACGGCTGAACCAATAAAAACATAGGGATCCTTGatgat attcttattttcagcgGCTTTCGTTTGGTTTGACGCGACGTCGCTACGTT TTTGGTCGTCAACAGCTGAACCAATCAAAACATAAGGATCCTTGATGATA TTCTTATTGTCAACAACTTTAGTTTCATTTGAAATTACTTCGCTCCGTTT TTGGTCGTCAACAGCCGAACCAATCAAAACATAAGGATCCTTGATGATAT TCTTATTGTCAACAACTTTAGTTTCATTTGAAATTACTTCGCTCCGTTTT TGGTCGTCAACAGCCGAACCAATCAAAACATAAGGATCATTgatgatgtt cttattttcagcggCCTTCGTTTGGTTTGACTGTTGAGTTTCACTGCGTC TTCGACTATCCACTGTGGAGCCAATTAAAACATAAGGGTCCTTAATGACG TTGCCTGCTGATTTCGTTTGGTTTGCTGCAACCCCGCTGCGTTTTCGATC ATCAGCTAAGACAGATCCGACTAAAGTATCAGGTTTATAGTATTTCTTAT CTTCCAAATCGTCAGGTTGTGTCAACTTATGTTGTGGGCTAATTCCTTTG GTGGTGGCTTTATCGACACGATCTCTCTTGCGGCCGATATCAGCGTACGG GTCaattttgactgcttttacatTCGTGGACTTTTTGCTACCCTTTGATG GGTGTTTATCCAtactatttctttttttaccgATGTCAGAGTAGGGGTCC TTACCGTTGATTTGATTACTGACTGTTTCTTTCGAATCTTTTGATTCCGG TGATTTTAGTTTCATCAACAGAGGGAAGATTCCTTGGAAAATACTCGGTT CAACTTGATCTCTACCAGCATTGGAAACTTCAGCCGGATGTTGAGGAAGG TAGACACGTTTATGGGCCTTTTTCGTGATTATGTGTTTCTTAGAAGCAGG GTGGTGGTGATTCTTCTTGCTAATTGTGTGTCTTTTAACAGACTTCCTCT TCTTGATGAAATGTCTTTTGACGTGTTTCGCTTTCTTCACCACGGATCTT TTAGTAGTTTTCGTTCTCTTGTTCGTATGTGGTTTGGTAGGCTTAGCTCG TTTGCTACCCAAATCAGAGTAAGGATCACCATAGTGGGTCAGTGGTTTAG ATTCCTTTACTTTTGATGGATTCACAAAGTTGCAATCATCATCTCTCTTG GAAGCTTCATTTCCAATCATTTCATAAGGCTCACTGCAACTTAAAAACCG TTTCGTGATTTCTGCTGATCGCCTGCTACGTTTATTGATCTTGGCTTTCA GTGGAGTTTTAGTCGGGTCTTGGCTTCGTTTGGTCGCGACAGTTGATGTG ACGCTTTCTCCGACATCTAAATAAGGATCACGTCCCTGGTTTACACTTTT TTGGGGTGCTTTAAATTCATGCGTTTTAGAAGCATCATTATTCTTGGAGC TTTCTTGTTTAGCTCGTTTGGTAGGGTTCGGTGAGGAGGCCCCTATCTCC AGGTAAGGATCCGAATTTTTCGCATTGGTTTTCACCTTGGATGCAATCGC TTGCTGCCCAAATACTGGTAGTGAGCCTTTGGAGGTCTCTTCCGATTGGG TAGAATTTGACTTTGGAGCAGAATTTGTCTGTTCTTCGCTAGCCTCGGGA AGTTTATGTCGTAGATTAGCATAAGGGTCGGAAGAAGGGTCTTGTGAGAG AGTTTGAGTTGAGTCGCCTTTTGAAAGTGTTTGACTTGAAACACCATTCA TTTCATTCTTGATTTGTGCGTTCGATTTATTGAGAGCACGAAGCAATTCT TCAGTCTTGGCAAGTGCTTGGTCAACTTCTCCTTCTTCGTCTTGTCCTTT CAAATTTGCTTGATTATCCTCTTTCTTCTTCTTGAGAACTTTCTCGTTTC CCTCCTTCAATTTGTCACTCAATTCTTTTACTCTCTCCATAATCTTTGCT CCTTTCTCTTCTTCACCCTCTCCTTTATCCTCCTCCTTCTCTTTATTTGA TTCACTCGTTTCATCCTCGTTCGTCTTCTTCAGTGAATCTCCTTCTTCAT GATTCGCTTTTTTCAAAACACTATCAGCCAATGAAACATCTTTTTCCAAA CGTGGATCCATGTGTAAAGTTGCGTTGCTACCAGACACTGGACCCGCCAT GTTTTGAGTTACATTTGATACAGTTTTGTCAGTCACCGATTTATCAACAA CATTCGACTTGCTGTCACTGTCACCCTTCTCACCCCAGAACTTCGAGCTC TCTCCAACATCTGCGTAAGGATCACTAAATTGATGTTCAGATTTCGTAGA CGCTATCTGATGTGTGTCAAACGATTCTTTAAGTTGCTTTTGCGCTTCAA GTGCAAGTGATGACTCTGGTTGAGTGTTGCCCTCAATGTTCGAATTCTCT GCATTCTTACCTAGCAAGTGAACTTGTTTCTGATTAGTTGCTCCCTCTTT TAGTTCTTCTTTACTCTCCTTAGAAGTTTCTTCGGAAAGTTCAAACTCCT TAGCTTTCATCATTTCTTTACCACTAATCTTCGATTGCACATCGTGATCA CCCTCTTCGCCATCAGATTTGGCAAACTCCTtcgatttttctttcttctt tttcgaaTCATCTTTATCTTCGTCATCTTTTGGCGGCTTCTGATCACCTG GTATTATTTTTGGAGGTAGAACTTTACCAATCGACTTATAAGGATCTTTT GCGTACGATTTCACACCTTGTATGTTTTCCATAGACGTTGGCAATTTCGC TTTCTCTGCAATCTTCTTGAAATCAGTAACCTGGACTTGTTCTTTCTTTT CTGCGTCATCTCTCGAATAAACACTTGTTTCCTGGTTTCCATCAGCACCT GGACTGGTTTCTTCCAGCTTACGCTTACTTCCTTTGACAGGCCGTGCGTT GATGCTTTTCAAGACAATGCTCTTTGAGACAgctttaaatttcgatttaa gACCAGCTTTCGATACAATTCCACTCTTCAAAGAAGCTTTAATACCTGTT GGTGCTATTCTGGTCTTTGTTATCGAAGCTCTACTTTTCACAGTCGTAAT TTTGTTCTTTCTACGGCTCAGCTTTGCCATTCTGCTTCGTTTCTCATTCT TGACGTTTTTCTTGTGATTCTTTTTAGAGAATGTGGAGCCTTTCAATGGT TCACTTGGTGCACTACCTATGTCCGAAAAAGGATCTCTTTTATGTCCGGT AGTTTTCTTCGGTCTACCAATTACCTTTTGTCGCTTTTGCTTCTTTGAGT GTTTGGGCATGCGGCTCCGTTTACTCTTCTTGTTTTTACGAGACACCTTT CCTCTTTTCGAGACTTGCTTACGtgatgtttttctttccctctttgCGCC TTTCTTTTGATTAACTTTGGTTGGTAGCCTGTGTCTCTTGTTCCCGATAT CAGCGAAAGGGTCTTTCTTAATAGTGGCATGAATTTTATTGatctttttc aaaggttttaGAGACTTGGTTTGAGCTTTATCAAGTTTACTTGGTGATTT TGAATGGACTTCGCTTCCATAACCAATATCTGCGAAAGGGTCACCAGACT TTTTGTAACCTTTGCTTGTCTGTGTTCGCTTGGATGGCATCCCAGAGGTG TTTCCTACATCCGCATAAGGGTCTCTTTTGTAGCCTCCTTTAGTTGAAGG CCTCTTATTTGTATGTGTGCGTTTTGTAGGGACATCAGGAGCGCTTCCCA GATCAGCATAGGGATCTCTCTTAGTACTCGTGCTAGGCCCAGGTTTTTTA TGGGTTTCTTCACGCTTGACTGGCGTGCTAGGTGCACTTCCTACATCTGC GTACGGATCTCGTTTATAAGAACCTTTCTTGGAATACGTTTGACTTCGAG CCACGGCAGCTCCCATATCTCCATAAGGGTCGCGCCCATTATCGAAAGTT TGAAGAGTTGGTTTCTTTGGCTGTGTGCTTGACTCCACAGCACTATCAAT ATTCGGCATGTTAGCTAGAAATCTGAAAGGTTTCATTTCGAACAAACGTT TCCTGGTTTCAGGGTTTATCTTCGCCAACGCTTCTTTGAATTTAGGTAAC GAATCTAACATCATGGTGTGAGGGCTGCTTGGAGCTTCACGCGGTGCCAC ATTATTGGCTGCGGTGATCTGTTCCAAAGCTGACGCTGTCGAATCGACTG TGGACATTGAAGGGGTATGGGTATGAGAGATTAATGACATTCCACCTGTG CCTCCGTGCGAGGCATCATCGAAAAGACCCCTCTTAGTACCTGTTTTGTT AGAGACAGCCCTGATCGATCTTTTCAATCCAGCAGATCCCATCGTTGCAT AAGGATCTTTGGCCAGTTTCTCATACGATTCCTTTTTGGTCATATATTTG TAGGTATCTTCCTCCTTATTTGGTAGGATAGCTCCTACTTCGACCTCATC AGTTGCCCGACGCCTTCTTCGGCGGGCTGGTAAACCACCTACATCAGCAT ATGGGTCGTTAACAACCATCTTGGTTTTGGTAGCTTCCTCTTTTTGCTCC TGATGGTGTttctgatgatgatgatgtcTTTTCTGGCCGATGTCTGAATA AGGATCTTTCAATCGATTCAATTGCAACATTgcttcttttgtttctttct tcaaTTTATCCAAAGTGTTTTCGTATTCAAGGATCTTTGGTTTCAAACTT GATTCAGTCATCTCTGGTGATTGTTGTTGAGCTTCAGCTGTTGATGTGGA TGTCATTGCTCTTGTTGCTGCGGACCCTTGGTTACCAGAGAGGATAGAAG TCAATTCTTTAGGCAAACTGACCACAATTCTCATTCTTTTTCCACGTTGT TCGATTCTAGATGGTGTTAAATGAATTTCTTTACCACGGTGGGGCGTTTC CAAGGTGCGCCGGCGGAGATCTGCATACGCTGCTTGAAGCTTGTTTTGGT CTTCCTTAGTCATTGGTTCGTCCTTAAAGATACGATCTGCGATAGTCACT GCAATAGCAGGGTTGTTGGTTATCGCAACAGCTCTGGAGTTTGATCGTTT ACCATCTGGAGGCTTCAAATCAAtcgtgattggttctttcagcTTGGCTA ACGGTCCTTTGGGatttaaagtaattttgagTGGAACCCTGGGTAATTTA CCGAACAGCTCCACAATAGTACTTGGTTGTTGTGTTTGACCGACTTCGAT TGATTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034233XLOC_034233Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054274-exon-scaffold_242-1491911889:1538819..1540962TCONS_00054274-exon-scaffold_242-1491911889:1538819..1540962Clytia hemisphaericaexon
TCONS_00054274-exon-scaffold_242-1510915933:1538819..1540962TCONS_00054274-exon-scaffold_242-1510915933:1538819..1540962Clytia hemisphaericaexon
TCONS_00054274-exon-scaffold_242-1575043694:1538819..1540962TCONS_00054274-exon-scaffold_242-1575043694:1538819..1540962Clytia hemisphaericaexon
TCONS_00054274-exon-scaffold_242-1491911889:1541455..1547626TCONS_00054274-exon-scaffold_242-1491911889:1541455..1547626Clytia hemisphaericaexon
TCONS_00054274-exon-scaffold_242-1510915933:1541455..1547626TCONS_00054274-exon-scaffold_242-1510915933:1541455..1547626Clytia hemisphaericaexon
TCONS_00054274-exon-scaffold_242-1575043694:1541455..1547626TCONS_00054274-exon-scaffold_242-1575043694:1541455..1547626Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:1538819..1547626 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 1.3597 1.06641 0.30887 0.0141008 0.506819 0.271001 1.37226 2.30913 0.649921 3.11541 1.47774 1.12454 0 0 1.46521 1.81634 1.50336 0.846286 4.15595 3.79644 0 0.111679 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054274 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top