TCONS_00054215 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054215
Unique NameTCONS_00054215
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2166

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054215 ID=TCONS_00054215|Name=TCONS_00054215|organism=Clytia hemisphaerica|type=transcript|length=2166bp
CATCATCGAGTAAAGATTATTCAATGCTGAAACACGCTGATGCTATTAAA
AGAAGTTATTTGATATCCCAACCGACCTTCGAATATAAACTAGAAGCACA
CACTCGAGATTTCTTAACTTAGTGAGAATATAAAGGAAACTATTACTTTG
TTTGAAAGATTTAGCATCCGTCAAAGACATTCTAATCTTCCAAAATGGGT
GCAGGATATACACTCCCCGCCGATATGGTGACACATTTTGACGATGAAGA
ACTGAAGAGACTTGGAAAGCGGTTCAGGAAGTTGGATACTGATAACTCAG
GAACCCTTTCAATTGAAGAGTTTATGTCTCTTCCTGAGCTCCAACAAAAC
CCTTTAGTTCAAAGAGTCATCGAAATCTTTGATACAGATGGTAACAAAGA
AATTGACTTTCAAGaatttatcgAGGGAATTTCCCAATTCAGTGTCAAAG
GAGATAAAACACAGAAATTAAGATtTGCATTCAAAATATATGATATCAAT
CAAGATGGCTTCATTTCAAATGGTGAACTTTTTACAGTCTTACGTATGAT
GGTAggaaataatttgaaagaagTTCAGCTTCAACAAATTGTGGATAAAA
CTATTTTGCAATTTGACACAGATGGCGATGGTAAAATTAGTTATGAAGAA
TTTTGCAATGTTGTTGGATCGATGGATGTGGATAAAAAAATGGTTGTTGA
TGTTTAACAAAGTTCATTGCCTCAATCCCAAAGTATATTTATTGATGGTA
GTTCTTCCTCGTATGAAATCCAACGATGGTGAAATGAAGATGATTTCATT
GTGTTTTCTGCAGGAAAACAGGATGGTTTAGTTTTATTCATATGAAAGTG
GATAGAGTTATAAAAGAAGTCTATCATTCATTAAATCTTCCTGGCGTGTT
GGGAATATCAAGTTAGATGAAAAATTTAACTCGAGTTCAACCCATTGAAT
CAACTTTCAAACAAATGTTTATTGATATTGTATGAAATTTTTAATGTAAA
ATTTAACGATTACtgaaattatcatttttttatttggggcatttttcatt
ttctcgtTCAGGATTTattaattcaaaattagtgttattattataaaaat
tccaacataatttttcatttaaagtttTCAGACATTGTcataacaaaata
tttattgTGTATTTATTATTTCTTTGTCGTTTAAAGTATAACCTCGCTCT
GGAACTCGAGAATGATAGCTTGAAAGGAGGCNTCCTGGCTTGTTGGGAAT
ATCAAGTTAGATGAAAAATTTAACTCGAGTTCAACCCATTGAATCAACTT
TCAAACAAATGTTTATTGATATTGTATGAAATTTTAATGTAAAATTTAAC
GATTACtgaaattatcatttttttatttggggcatttttcattttctcgt
TCAGGATTTattaattcaaaattagtgttattattataaaaattccaaca
taatttttcatttaaagtttTCAGACATTGTcataacaaaatatttattg
TGTATTTATTATTTCTTTGTCGTTTAAAGTATAACCTCGCTCTGGAACTC
GAGAATGATAGCTTGAAAGGAGGCTGAAAAATCTATTAGCATTTTTAGAA
TCCACTTTGAATTTAAGAAAATGACCCTCTGTAACTGTGACGGTTAGATG
AACTAAAGTAAttattttcttgatttctttaaaaaaaaaagaacattgtC
TACAAAATTGCAAGTTTAagattattttccatttttaattATTCTAGTac
atatatttttgttttaaaatttgttttacaTGCACTTTTTGCCCTAAGTT
TGTTAACGATATTGATTTTTCTAGTATTTGTgtattattgaaagtttgtc
tttAGTCTAACTTTAATTTCCTTTTAACCCAAAAGATTGCATGGTGTATA
TACCAATTTATGTGCATCAAAAgtaattgattttattttgaagtgagATC
GTCCatgaaaattttgtattttcactttttgaccCTTCATCTCTTTTGAA
TTTAGATCTCCATTAATCTCCATTACTACAATTAGTCAAAATCATAATCT
AATTATCGAGGAAACTTTACTTTGTGACTACTTACtaaaggtttttcaaa
atttattttttggaaattttggtttttatgtCTGCTTTTGTGTAAACTAT
ATATCTTTGACTTTAG
Run BLAST on NCBI

protein sequence of TCONS_00054215-protein

>TCONS_00054215-protein ID=TCONS_00054215-protein|Name=TCONS_00054215-protein|organism=Clytia hemisphaerica|type=polypeptide|length=170bp
MGAGYTLPADMVTHFDDEELKRLGKRFRKLDTDNSGTLSIEEFMSLPELQ
QNPLVQRVIEIFDTDGNKEIDFQEFIEGISQFSVKGDKTQKLRFAFKIYD
INQDGFISNGELFTVLRMMVGNNLKEVQLQQIVDKTILQFDTDGDGKISY
EEFCNVVGSMDVDKKMVVDV
Run BLAST on NCBI

transcript from alignment at scaffold_242:530699..550815+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054215 ID=TCONS_00054215|Name=TCONS_00054215|organism=Clytia hemisphaerica|type=transcript|length=20117bp|location=Sequence derived from alignment at scaffold_242:530699..550815+ (Clytia hemisphaerica)
CATCATCGAGTAAAGATTATTCAATGCTGAAACACGCTGATGCTATTAAA
AGAAGTTATTTGATATCCCAACCGACCTTCGAATATAAACTAGAAGCACA
CACTCGAGGTAACGTCGAATTTTCGTTTGTGCTCCCACATAAGAAGCCGA
TTAAACTACAAAGGTCTCGTTTTATGAGATAAAagacgaaagattttttt
ttagaatgatTATGCATTCTTAAGTTTAgcatattcttgattttttacCA
ATCTCATCATTAATATTCGTAAATGGTATATTCTTaacataaaaattaat
tttaagttattttcaataaattaaGGACTACTTTATAAACTACAAAACGT
GGTCCGATATCTCCTTTTCCTTCGGCAACCTCTCCCCCTAAAatcaatgt
tggagttgaatttttTGACGTTCAGCATTAATATTGGGAGAAGGGATTGA
CAAAAAGCTATGTTTGTACTTTCGGCGTACAGACTttcacgagcagaaac
tttcgcaaggTCGAAAATCGAGAAATTTGCGACATTTACtttttcgcgaa
tttgaggaaaaaatgtttttcgcaagcataaactttcgcaaatcgttgga
tgaaaatgagaattttcgaaaaaaaattgtcttaaaagtgaaaaatatta
caACCTCTAAAGACGGTTAAAGGCATTATAGGATGATAATATACCGAAAA
TTTGATGtttattacgatttcgaggttttacatatagatttccaattttt
ttgagaatatttcgtgagcataaactttcgcgaattgccatGTTAAGGAT
TTTCAATAATATTTACgttcgcgaaaaaggccaaaattcacgataaccgc
gaaagtttctgctcacgaaaatttgtacgcctaaagtattttatgttttc
gTAACGAAGATAAGGTAACTGCAAATAACATCTTTGAAAATATACTCTTC
ACCTGGGGAATGATCAAGCAGCCATACATTTTCTCCCCTATGATATTCCA
CGCTTATTGGTCTTGTATTATCCTTTGGATGAAGTAACTTTCTAGATGTC
AATTTTTCGTAGCTCCATTCCCTACTGTCGTGGACGTAATTACCAATGGC
AATTTTACTGCCAATCCCTAACTTACGTAGAAACGGTgaactttcttttt
taatgatcaAATTATTCCCCGAACAAACAATTTTACCAGGAGCGATCTTT
AATTGCATAGCATTATACCATTTCGCATAGTTCGAACAAAATTTGGATTC
GAGAAACATGGATAAACCATGATATAATACTTCTTGTGTAGCCATGTGAC
TGAAGTCGATTTCTTCTAATACTTTATCCTTCACAGGTACAAGAACAGTC
TGTTCGTTAtcgtttttattattttgtctGCCCTTTTCTTGTAGCCTATC
ATATGCTTCCTGGAGATCGTTCAATTTTCCTTGTAgcattttcttgtttt
ctttttcgtcTTTTAATTCTGtacttaatttttcaaaatcttttaataAT
ATTGCTGTTTCTAATTGCGACGTTCTTATCTGGTTTTCAATCTTTTGATT
ATCGTTTTGTAATGTTTGGTGTTTTCCGTCCATGACAGCTTTCTCGAGTT
GTAATTTATCTGATTGTTCTTTAAGGTTTTTGTTTTGCTGTTCAAGCCCT
TGCTTTTCGTTCTTCAATCTCAATAACTCGACCCTCAAATATTTATTGTC
TTCCACAACTTTTTCCTTTTCGATCTTGACAGCTTTCAACTCTTCTTCAA
GCTTTAAGTTTTGATCTAAGACTATTTTCTTATCCAAACCAAAttgtttt
tcagttttcaacATAGCAACTTCAGCTCTCAGTTTCTCCAtctcaaaatt
gttttttaattgttcatTTTCAAGTTTCATTTTGTCTACAGTAGCCTTCA
AGCcttcattttctttctcacttttGAGTTGGTCCTTTTCGAATTTTAAT
TTCTCAAGCTCATTTTCTCTCCTCGTCTTCTCAAGTTCTTCCTTCAGTAA
TCTCAATCTCTCCTGCGCATGTCCACCACCGTTTCCTTTTACTTGTGGTA
CAGCAATAGCTTGGTGATTATCATCCTCTCGCACACCATGTGCGTTGTGT
TCGTCCAATCTTCTTTCGCCGTGCGCATTATGCTCTCTCATATCATCTAC
AATGTTTTTGATGACAACATGTTGTAGATTGTTTTCCATTTTGATGCAAA
TTCAACAAACGAATTCGAGGAAAACTCAAACCTTCCTATCCGACAAATCT
CTTTctactttcaaaataaaactcaCCTCAAAAAATACCTCTAATGCATT
TTTACAAAAACGTAATATGAAACTATCCAAAGGAATGCAAcctatttaat
ttaaaaaattattatcaaaacaatcaaaagactgTTCAGAAATCGGTTGC
ACGTGATATTTTTACTATAACGAACCTGATTTAATCATAAGCTTATAATA
CAGCACAGCGATAAAGGTGTTGTATGATAATACCAAAACTGTTACAGGAT
AATATTTAGagaattcaattttcaaaaattggctgGATTTTGTTCGCATT
ATAGAAATCCTGATAAAAGTAAAATAGACCTGAGACATTGTACAGAAATA
AACAAGACGGGCCTAAGACCAAAAATTTTGTGGTGGGTACGGGAGCGGCC
AATTGAGGTTAGTTTGCCTTTTTTTGATCAAATAACACAAAAGAGTGCAG
CggtaagaattaaaaaaattgggCTCCACCTAAACTGAGAAGTTCCACCT
TCTGCACATTCATTCAAACGGATTCGAACGACGGATCGTAGTGGTTTCGC
TCAACAAATTCATTTGCTTCGAAATATCGGAATTactaggggccgtccac
atagtacgtatgcactaaaagggggggggggNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNcatttcatcatgaatattcttaacttttttgg
gaaaatcatcctaaaatattcttacaacattcttaggttaggatcctaat
tcagactagatttaacatttagtgtattcttataaaaaaaagcgtgtact
tttgccaaaaaatttCGCGGCCATAATTTCACAATCAAATTTCCGtgaaa
aagaaagatcaaaagtactcaaattcgcgaattgtttttgttgctgttca
cttatcaaaaatgttccaatcgTATAATCTTTCAATATCCACTTTATATA
TATATGTGAAATATTACATTAAGTGAAATTAGCGAAGTTAAATTCCCGTA
AATTACTCAAAATTGACTCGCGAAATTTTTTACTAGCCACGGAGTTGTCT
CACATTAAAGAAACACTTCCTCTTAGTAACCAAAAACGTACACGTGGTCA
CAGATTTTGAACCTCAGCGGCACCATGAataaactctgagtttgaaacat
attgtgtcaactctttattatataTTGCGATATATAGAAAAGAGGCCCGC
CTTCGTTATACTTACCTAAATTGCCCGTCGCTTGGGTTAACCCtatttta
tcaggggggggggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNTCCATACCTTTTCTAGAtgaaaagttatgcaag
gctggtggaaaacccccccccccccttgagaatacaaaatccgaaaaagc
ctgataataatagggttaacaTTAAGAGTTACTATATTTTTATGGGTTTA
TTTTTCTGAGGCCAGAGTTTGGTAGACCGTTGTTAGACCATCCTATCCCC
CAAAATATTGgcaaaaaatcacaaacaaacaaactcgAAAAGCATTTTGG
GAAAAAGATAAAATTCGTCCttttatgaaaaataagaattgagTTAACGT
CGCCGTCACAATTTGCATAATTGAGCTTACGCGAAAATTGCTAACTGTAA
CTCCGTAACTCGAAGTTTTCTAGCGCGCGAAACCAAGCTTAAACAGCAGC
AACGCCCGCCCCGCCCGAGgagcaaaatcaaattttttctaacGCTAGCA
CGCCCTGATGAGGTGGGGGCGTTTGTAACACGCCCAAATGCTAACGGGTG
CTACCGGCATTTCTTTCTACCGGCTTTATATTGGTTTTCAAAACAGGGGG
TCGGATTTCAAAATTCAACAGCAAAATGCAAGTTTGATTCAGatttaaaa
atgttatcaatATTGCATTCAAAACTTGTAATATATTTACACCTAAAGAC
ACTAAATGATATAAACTTGCGTAATTTTACATAATATAACAACCTATAAA
ATCTTGTAATTGTCTCCCTAAAAAAAACCTTGTTCaagtgttgttttttt
gttaattgacTACGGACTGACGGAGCAGATCCGAATCTGAGACTCGAAGT
GGGAAGAGCCAAAGCTTTGGAATCCAcgaagaaatttcaattttacaaca
cttctcttgtcttattgcaagtattttttgactttatatGTTGTATGAAT
AAGTAAATAAGTTGCTCAGGTTTTCTTCAATGCTTTGTCCTTTTTTTATG
CAGTGTTTATACCATAAAGACTAAAGGCAATACTGATAAGTTTGACTGTT
TGAGAGGGGGGAATCTTGGCAGCTGCGCCCTTCTCTTTACAACACCCTCT
CCCATTTTTCTACCAGTCCTTTTTGACCCTACCATAGTTGCATAGTTTCA
AATTCTGAATTCAGGACAAGGTACCAGCGAAACAAGCACCAAATGGAGTT
TTGGGTCCAAGAGCATAAGATAAGAAGaggttttttcgtgactttgaTAT
ACTTTTTTAggaggcggtcatcgaaaaaatgctctgttcgcatcgcaacg
ggtgttaaaaatgcatgccggcggacgggcggtcaaaaacattcccgggt
tttttctaatcacgccagtaactcaggctcaggggcgggtggtaacgcga
gcaaaataatttttcgatggtcgtcagagcaattggagaaaaaagctata
tagtcatctggggtaattacgggacagttaaaattaagcggtaaatacGG
GACACTCCTAAAAATGGTGCTATTATTATAAATTTGGATTCAGATGGAGA
GGATATTGTGGAGATAGTCATTTTAACTGCNTATCGTTCTGATGTGATTA
TTCATAAAATTACGTTTTGATAAACATGATTACCACTAAATTGTTTTCCA
ATGATACCATTGCTTGTgcaattgttttttcttttgtccgCTTTGATGgt
aattccattgttttcataGGAAAAACAATTGTCGAGGTTTTGACATATTT
AGTCCCTTTTAATTTCATTATGGGTTCTCCCTCGATTTCACAGCAACTGC
ACCCATAGTATCCATTAAACTGAACGGTTTCTTGGACTAGACATTTTGCT
TTAATATAAGAAGACAAacaaaatgtgttgtccttttaagggaAAAGATG
tcaggtgtttgaaaatagtaaaattgcattgagaaaaaggtttttccgat
ttttaaaagtgattttttcaatttttcgttgctcaataacatgaaaagtt
ctaaaataataagttaaaagatcctgcatcgttgccgaaacacagccaga
aagagataacaaaccctcgttgtaaatttgtttacatatgactcgatttt
gctatctgcatttccaacaaaaaccagttgaaaacaaaactaaacgaggc
acagcGGGCCTTCTTAttgcgagggtgtcaaataccacgttttcaatgat
aaaatcaacttttatttgcaaaaacggcaataattgccgaaaacggcagt
tttcatttatttacttttttatttttctgctgattcagcatttcatcgtt
aaaaaaattgccgttttcggcaataatttccgaaaagagcaataattgca
gttcttatcttaaacacccgactgaaAAATGTCTAGTTagattatagacc
ttttttcaaagaggccaccctgttgaataattatgNtaaccagatattta
aatttgggctcaaaaatatttaaataaataagttaatagtattcaatata
ctatttgtatctatcagaaaataaaacacttacagaacaacATCGTTTTT
CATTTGGAATACCCCCGTATTTGGACCATTCTATGGTGGGCGCAAAAtag
ggcggaaactaagtagcaccctcagtgcaagattgccgcctcatctttat
tcgcccgcgcgagaatgcaagctaatcatttttttctcgcgagctcaagg
ggaaaaggaaagtgatcgatattctttgaaaggaaaaacgtcagaaacaa
acccaaagaccaaaagatgtatcttgttgttgacaatcgatcctgtgaag
atgaaaaaatttctgctttgcgtttttttcggaacgctgaaaaactctaa
tttcgatcatcCTTTAAGATAAAGANNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATCCTTTAagataaag
aggttgcgagatttgggttagcgaggcaaaaatcgctaaaaagctggtaa
aatcgtaatcctcaaaaatcgatgttccagcctcactgatgGTTTGAAAT
CATAATAGTCACATTATCAAACAAGGCACCTGATCTCTAAAAAGTGTGTC
CCATATTTACCCCGTAGTCAAATCTTAATCTTGGGGTAATTATGGGACAC
TAAAGTTTGAGTTTgaagtgtttattttttatNNNNNNNNNNNNNNNNNN
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aattggATCTCTAGGATTAATACTTTTAGAGTAATGCCCAAATATGTCAA
Aatcgtcccgtaattaccccagatgactatacttaaaaagaacaaatttc
ttttcccagatttttttccgcatctccgcaccggaaaatcagcagaaaat
agacctttttttaaagaggccaccctgttgaataattatgtagtccagca
gaaaaacaatgatagagtcatgcataattactgttcaTGCATaatgtaat
aattatgcataactgtatcattgtttttctgctggactacataattattc
aacagggtggcctctttaaaaaaaggtctatttgatgtgggcgggtgacg
cgaattaAGTTGACAATTTAACTCTTGCATATCAAATTCAGCCTTTCTTC
AGAGAATTTTAAGATGAGAAAAAGCCttgaacaaaaatttaaaaattcat
gaaacaatttttatttttcttcgaagCTTTTTGGTGTCTATATCATCATC
AggttcaaaaaattgatctagTTTACTTAGGATCCTTAAGATCactgatt
gaaacaaataaaagaggTCATTTTAAGGTTGACATTTTACAGCCACTCGT
TGTGCAAGGCCAAGTTCGCACCGAAAAGAAGGGTTGTGTGAAATGCGGCA
ATCTCATTAAGAGACCACTTTacatttttgttgcagatttcaatataaaa
ttCTCACATGGTTGACTTGTTAAGAGCATGAATCTGGTAATGTCACCCAA
ATAggtgaaaaaatttggaaaaaataaagttttgaatttcacttttattc
ctggataatctttttattaatgacttcaaatttcagaaaatataaATATC
AGGGCTTAATCAAACTGTCCAGAAATTTAACCTAGATTAGTTATAATcag
acaaatttggcaaaaaactctttgtaGTTTACACTTCATTTGAGATAAAA
TATGTGTAATCTAATACTTGTCTTAGATTGAAATCTATGGCTAATATATT
AAGCTGCgttgaaaagcaatttttaccgTCCAATAtagcatatttttcaa
attatgacactttttccagaagaaaatctaaaataccaaaaaacatTCCC
ATTCTAGATATGAAGGACTCAttataaaattagaaaatgaaaccttgttg
gttgcggacataactttttgtcaaatttactttaaaatcagcaataaaca
ttaaactgagtaattatttggcttttaatactttgctgtacttgaaccaa
gacttaatcattgaaatttgttgtcttgaaaggtcttcgtaactatgatt
tcctgaaaattgaagatttatctGTGAAAGAGAATCCAATCATATATCAT
TTTTTGTCataatctatttttaaaagttaaattttgagcttgacATTAAC
TGTTGTACATCTTCATAATCagtaaatatgatttttccttgaaaaGCCAC
TCAACATTTTCAATAGAATAGGTTAAATGGgtaccttaaggggattaatt
ttcgcgggaacttattttcgcgagacaattttttcgcgaaataatttaat
tttcgcgggacttattttcgcgaagacGGGAATTCTAAATTTTTGCGAGG
ATAAAATTTCGCAAATCAGCCCCTTTTTGACCGAatctctttcattttcc
taggggttcgggcaaaaatcatgattttaaatttttcgggaggattatat
tttgcgaatttcgcgaatccaaaggtttttaaaattttcgcgaggattaa
ttttcgcaaatttcggaaaattcgcgaaatataatccccgcgaaaattaa
tccccttaaggtaataatgctatgttgcggacataactttttttcttcaa
ggGTAGAACCATAGAACATTTTACatcatttatttaaaatttcggagtgt
ctttttctgttgctaaaatttaaggaatatttgagactaaatcaatataa
aaccaaaagatttggtttggtttgatttcagttattacatgtttttcttt
gaaaagaacaaaaaaggaGACTCAACAATGATATTAAAACTTGGTTGACT
TGTTAAATATGTTGTGTCAACTAGTCAGTATTGTATTGTTACAAAGGCAA
AGATataagaggtaagactagcctagtttctaatcctggaagGAGTTTTA
GTCTAGACAtcctttatttgtttcaatctgtgattCTAAGCGTGATTAGA
CCTTCATTCTCTGACAATTGAGAGAATGTGATGCAAAAGTAGAATTGGAG
TGCCACGAAAAATTCTTAGATACAAGATTTTATGATCttaaatcaatatt
ttcatCTTGAAAATCTTGTGCCAAAAAGTAAAGCATGGAAAATTGTTTGA
CTTTCTATTATTGGTTCATTCAAAATGGAGGATTTTGAATGAaccaataa
aaaaatgaaaaattttctattttttttatttgcacAAATCCCTGTAACTA
TGCACCTTGTTGCCATAAGATattcttttgaaattgaaattaatacCATT
AAAGTAagtagtaagtttgcgaccgcagtcaagggcgacccgaaggctcc
ctttttgtatagctgtctacccgaaggtaggggagggcgccactcctttc
cctggatttctccacttacccttgacctgtctctttagttgctgagcatc
aagcagagaggcatcaagtaccattttgggaatctttggtgtgacccggc
tggggatcgcacccacaaccttgcgcactgtaactggatgctctaccttt
atgCTATGGTTACCACGGTTACGGTTACGGCTACGGTTACGGCTACCATT
AAAAGCAATAAGTGAAATTGGCTTGCATCCTAAAGATTATAGTCTTAGTT
GATATCGTAGATTCATCTTACCTCATTATCTTattaatttcaataaaaaa
catacaaaaaaaaaatacataccaaaTTGCACTCTCCCTAGCTACAAtgc
aaattttgataaaaactgttttgttgtcaatttgacaaaatgaagccttg
aaatgtctattgaagaaaacaaacaaaacttttgCTAAAACCTGAtatat
caggggggggggtcttgcagttacNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNagttattccatagtgtactaactgatttt
accctcaaaattggtgtataccacccccaaaaatgccaaatttggcaatt
ttttcactgaattcctcatttttgattttactgggtacgtcttattaacg
accgttcaagagttaaatatctcaattattttccaagtttgttaaaatat
ctttcatgccttgattgttcaagaaaaaaatttctgattttttttttgac
ttttgaaaaaaatgttttgaatttttttgcttccggaatttttaaaaacc
taaaattttaagtgaaaaattgaaaaatgtgctcacttagNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggcaccaccca
tgttgcagttagtccactggtggagtaactgttttcccaaattttggttt
atataccaccacggtagtaattgtcatagtgtttatataataactacATG
ACCCCCCCTGGATATATAAACTTTGTTGATCTGATTTCTATAGTTTGTTA
AGTGGGAAGCTTTTTATGAGAGTGATTTTCACCGATTTTCACCCCTTAAC
AAAACATCATCATTGATGCTGGTGGCCTTGGGTACCCCTCAATATGTGAA
ATCCAAGCTATAATACTTTTTTCTTAGGTTTTTTTGGTCTCTTGGAGGAT
AAAGCTTTATAAAGTGGATAACcagttattttcaattttcagatttGTGT
CAGAATATGTAGGAATTAAGATAATTCAGATAATGTTGCAATAAAAGTTA
TCCATAAAAGAATTGCACTTAACAGTGAAATTTATCAACAAAAGAATACA
TTTCCTGTGATATTGCGTTGATAATTAGAATATGTGACAACAAAACTCTG
ATCCTGTTTTGGCTCTTAACTTTTACttacaacattttcaaaatatatag
tgAAGGGAGACTTTCTCCCAAAATTAGCAGCTCTTCAAATAACTTATCTA
AAACTGAGAAATTGCCTATTTATCCATAAAGCATAGGTCAAACCATAGGT
CATCGACAGAGTGACAGGTCAATCtacatctgaaaatgaaaaatagctgG
TTATCATCCCTAAAGCATAGGTAAAACTATAGGTCATTGACAGAGTGACA
GGTCAATCtacatctgaaaatgaaaaatagctgGTTATCATCCCTAAAGC
ATTGACAGAGTGACAGGTCAATCTACATCATGAATAATTATAACATCTTA
CTTACCTTAGGAAAAAGcataaatttttcataataTATTTCAAACCATTA
TACCATGTACATTTTGAAGTTGAAGTAAATGGGTTATGCTTTTTGTATGA
TTTTCCAAGAGAAATGAATGcgtctttttattttaatatctTTTAGATTT
CTTAACTTAGTGAGAATATAAAGGAAACTATTACTTTGTTTGAAAGATTT
AGCATCCGTCAAAGACATTCTAATCTTCCAAAATGGTAAGTTCCTTATTT
CTATAAAATCAttatgcaaattttttttcttctcaagTATATAAACCTCT
TTCACAGTTTCTTATACTNATCTGTCAAAGACATTCTAATCTTCCAAAAT
GGTAAGTTCCTTATTTCTATAAAATCattatgcaatttttttttcttctc
aagTATATAAACCTCTTTCGGAGTTTCTTATACCCTGTCattttgttcat
attttcaccaatttttttgaaagctctCTATGGGACCAAAGATATGAGTG
ATTTCATAATTGTGACTCTATCAttagctaaaaataaaaagattgaaata
aaaaaagtaagttACATTGTTGATGAATTAGAAACAATAAAATAGTCCTC
CTCATTTTATAAAAGTCTATAATAGTAAAGTAGTCCTGTTTTCATATCTC
Ttacaaaaatagagaaaaataataatattttaatctttaagttgaggaaa
tttttttggtccCATAATATCATTTACTGTTACTGAAAATAGAgatgttt
ttgaaataaaaatgatatCCTCTTTTGTCTTGAAATGTCtgaatttttct
tctgtttCATTTACAGGGTGCAGGATATACACTCCCCGCCGATATGGTGA
CACATTGTAGGTTTCTTTTGATGTTGTAGATAAACCTCCTATTCTCTAAA
AAGATACATTAGATAAGACATTCTTAATTCTAAAACACTCAATCAATGTC
GACCTGTCatatatttttagtttaaataaaattgggttttttttcaaaca
atttttcttttttgagttAATGTTATTTAGATACTTTGAACCTATTGTAG
CAAGCAGTCTGACCCAGTTTAACCTATTAAAATGGCTTTTATTCGGGCTT
GTAAGTTaggttctttttttttctttaacctATACAAAGCTCTTCACCCT
ATTATGAAATTCTAAATCTGACAAATAAAGCAATTAGGAgccaaatttta
gaaaatattaagacgtatcaaacttttttattagGTTGTAACTTTATTCT
TTCAATCTAAATTTTAGTTGACGATGAAGAACTGAAGAGACTTGGAAAGC
GGTTCAGGAAGTTGGATACTGATAACTCAGGAACCCTTTCAATTGAAGAG
TTTATGTCTCTTCCTGAGCTCCAACAAAACCCTTTAGTTCAAAGAGTCAT
CGAAATCTTTGATACAGATGGTAACAAAGAAATTGACTTTCAAGGTATTG
ATTTAGAAAAACTCACTTTTGTGTTTTTGCCATTTGTGTTGTCGTGTAGT
TGAATGACTAGGACTAGGAGGTCCTCTAGCctctaaaatgttttttaaca
cttttggTTGCTTTTTAAAATCCAATGATATTCTtatgtttttagaattt
atcgAGGGAATTTCCCAATTCAGTGTCAAAGGAGATAAAACACAGAAATT
AAGATGTAAGttaaattttgatcaaacaAAAGTGAAAACTCCCTAGTGGA
GGATGATGATgtatttaatttaattaaatttaattaaaattgGTTTcaat
accgggtgtgccacaaaaaagtttctctctttgaaactagttttctagaa
atctaaaaattccaaaagaaccattcctaacattggaagaagaaagataa
acttaaattttgatgggccatttttatttatcaaatgcaattcattagat
caaaagttatgctcaattctgctcgattgaataaaaaagttacttccAGA
AAGTGTtcgaaaatgttaaaaattgacctatcaaatttttatttcaaaat
tggcaatcgcaacagcctttacatgattataagagcatttttaattataa
ttaaatacattaatttaatttacttttactgAAATTGTCTTAAGACTTTT
TTACTAGAATGGATAAgtaagtctatgtaaggctggatgtacctcgaaac
ccatatttgatgtatttttatgaattttaccagatttctTGGCCTTTTAg
acaaattttctaaaaatatactGATGTGTCATGTagttatgcttctgttt
aatttgataggttgaCTTAATGATTTACactatttttttgtgttttttca
gTTGCANgttatgcttctgtttaatttgataggttgaCTTATTAATTTAC
actatttttttgtgtttttttcagtTGCATTCAAAATATATGATATCAAT
CAAGATGGCTTCATTTCAAATGGTGAACTTTTTACAGTCTTACGTATGAT
GGTAggaaataatttgaaagaagTTCAGCTTCAACAAATTGTGGATAAAA
CTATTTTGCAATTTGACACAGATGGCGATGGTAAAATTAGTTATGAAGAA
TTTTGCAATGTAAGTTTACGTAGACTcttatttttcactttgtttcaGGA
TTTCATTAATCCTTTCACACTTTTATCTTGCCTTAATTTATTAAAATGGG
AGGCttaataaagaaaattttttcaaagcttttatCTATTTGAACTTGTC
AGATTTTCTACTTTTGATTTAAGCTTGTTTagggaaatttatttttcttc
aatttaaGGCAGTCTTCGAAAATCATGTGTTCTTGCCTCAGGATTTCTGA
TTTGTGACTTTTCATTTTTCCTCTTTTAACTCCCAGTTCACAATAAATTC
TATTTATGATCCtacctttttctgaaaaataatcTTGTATAGATTAATAA
TCAAtaattgttgataaattttttgaaggtAAATGGACTATTCCaaagat
tccaaaaattttttttgggaaaggtgaccccctggattttttttcgattt
ctcaGGACCTCCCCTGGATTTTCTCTGCTTATTATTTGGACTCCCCTTGG
TTTTCGACCTTGTTTCACTGACCACCCTGGGTTTCAACCTTATTTTacta
accaccctggatttttcacttcatttttactgaccaccctggactTAGAC
GTTCTAAGTCTAGACCCCTGGATTTTTATTTATCAGACCACCCTGggcgt
cacacctcctcaaaaTCCCCCTATTTTGAGGAGGTGTGATGCCCAGGGTG
GTCTGATAAATAAAAATCCAGGGGATCTAGACTTAAAGCAAAtaagacaa
attctggaatatAGCCCAATTCAATAATTGCATTTCACTGTATATTTTAT
CTTACAACAGGTTGTTGGATCGATGGATGTGGATAAAAAAATGGTTGTTG
ATGTTTAACAAAGTTCATTGCCTCAATCCCAAAGTATATTTATTGATGGT
AGTTCTTCCTCGTATGAAATCCAACGATGGTGAAATGAAGATGATTTCAT
TGTGTTTTCTGCAGGAAAACAGGATGGTTTAGTTTTATTCATATGAAAGT
GGATAGAGTTATAAAAGAAGTCTATCATTCATTAAATCTTCCTGGCGTGT
TGGGAATATCAAGTTAGATGAAAAATTTAACTCGAGTTCAACCCATTGAA
TCAACTTTCAAACAAATGTTTATTGATATTGTATGAAATTTTTAATGTAA
AATTTAACGATTACtgaaattatcatttttttatttggggcatttttcat
tttctcgtTCAGGATTTattaattcaaaattagtgttattattataaaaa
ttccaacataatttttcatttaaagtttTCAGACATTGTcataacaaaat
atttattgTGTATTTATTATTTCTTTGTCGTTTAAAGTATAACCTCGCTC
TGGAACTCGAGAATGATAGCTTGAAAGGAGGCNTCCTGGCTTGTTGGGAA
TATCAAGTTAGATGAAAAATTTAACTCGAGTTCAACCCATTGAATCAACT
TTCAAACAAATGTTTATTGATATTGTATGAAATTTTAATGTAAAATTTAA
CGATTACtgaaattatcatttttttatttggggcatttttcattttctcg
tTCAGGATTTattaattcaaaattagtgttattattataaaaattccaac
ataatttttcatttaaagtttTCAGACATTGTcataacaaaatatttatt
gTGTATTTATTATTTCTTTGTCGTTTAAAGTATAACCTCGCTCTGGAACT
CGAGAATGATAGCTTGAAAGGAGGCTGAAAAATCTATTAGCATTTTTAGA
ATCCACTTTGAATTTAAGAAAATGACCCTCTGTAACTGTGACGGTTAGAT
GAACTAAAGTAAttattttcttgatttctttaaaaaaaaaagaacattgt
CTACAAAATTGCAAGTTTAagattattttccatttttaattATTCTAGTa
catatatttttgttttaaaatttgttttacaTGCACTTTTTGCCCTAAGT
TTGTTAACGATATTGATTTTTCTAGTATTTGTgtattattgaaagtttgt
ctttAGTCTAACTTTAATTTCCTTTTAACCCAAAAGATTGCATGGTGTAT
ATACCAATTTATGTGCATCAAAAgtaattgattttattttgaagtgagAT
CGTCCatgaaaattttgtattttcactttttgaccCTTCATCTCTTTTGA
ATTTAGATCTCCATTAATCTCCATTACTACAATTAGTCAAAATCATAATC
TAATTATCGAGGAAACTTTACTTTGTGACTACTTACtaaaggtttttcaa
aatttattttttggaaattttggtttttatgtCTGCTTTTGTGTAAACTA
TATATCTTTGACTTTAG

Coding sequence (CDS) from alignment at scaffold_242:530699..550815+

>TCONS_00054215 ID=TCONS_00054215|Name=TCONS_00054215|organism=Clytia hemisphaerica|type=CDS|length=3078bp|location=Sequence derived from alignment at scaffold_242:530699..550815+ (Clytia hemisphaerica)
ATGGGTGCAGGATATACACTCCCCGCCGATATGGTGACACATTTTGACGA
TGAAGAACTGAAGAGACTTGGAAAGCGGTTCAGGAAGTTGGATACTGATA
ACTCAGGAACCCTTTCAATTGAAGAGTTTATGTCTCTTCCTGAGCTCCAA
CAAAACCCTTTAGTTCAAAGAGTCATCGAAATCTTTGATACAGATGGTAA
CAAAGAAATTGACTTTCAAGaatttatcgAGGGAATTTCCCAATTCAGTG
TCAAAGGAGATAAAACACAGAAATTAAGATtTGCATTCAAAATATATGAT
ATCAATCAAGATGGCTTCATTTCAAATGGTGAACTTTTTACAGTCTTACG
TATGATGGTAggaaataatttgaaagaagTTCAGCTTCAACAAATTGTGG
ATAAAACTATTTTGCAATTTGACACAGATGGCGATGGTAAAATTAGTTAT
GAAGAATTTTGCAATGTTGTTGGATCGATGGATGTGGATAAAAAAATGGT
TGTTGATGTTTAAATGGGTGCAGGATATACACTCCCCGCCGATATGGTGA
CACATTTTGACGATGAAGAACTGAAGAGACTTGGAAAGCGGTTCAGGAAG
TTGGATACTGATAACTCAGGAACCCTTTCAATTGAAGAGTTTATGTCTCT
TCCTGAGCTCCAACAAAACCCTTTAGTTCAAAGAGTCATCGAAATCTTTG
ATACAGATGGTAACAAAGAAATTGACTTTCAAGaatttatcgAGGGAATT
TCCCAATTCAGTGTCAAAGGAGATAAAACACAGAAATTAAGATtTGCATT
CAAAATATATGATATCAATCAAGATGGCTTCATTTCAAATGGTGAACTTT
TTACAGTCTTACGTATGATGGTAggaaataatttgaaagaagTTCAGCTT
CAACAAATTGTGGATAAAACTATTTTGCAATTTGACACAGATGGCGATGG
TAAAATTAGTTATGAAGAATTTTGCAATGTTGTTGGATCGATGGATGTGG
ATAAAAAAATGGTTGTTGATGTTTAAATGGGTGCAGGATATACACTCCCC
GCCGATATGGTGACACATTTTGACGATGAAGAACTGAAGAGACTTGGAAA
GCGGTTCAGGAAGTTGGATACTGATAACTCAGGAACCCTTTCAATTGAAG
AGTTTATGTCTCTTCCTGAGCTCCAACAAAACCCTTTAGTTCAAAGAGTC
ATCGAAATCTTTGATACAGATGGTAACAAAGAAATTGACTTTCAAGaatt
tatcgAGGGAATTTCCCAATTCAGTGTCAAAGGAGATAAAACACAGAAAT
TAAGATtTGCATTCAAAATATATGATATCAATCAAGATGGCTTCATTTCA
AATGGTGAACTTTTTACAGTCTTACGTATGATGGTAggaaataatttgaa
agaagTTCAGCTTCAACAAATTGTGGATAAAACTATTTTGCAATTTGACA
CAGATGGCGATGGTAAAATTAGTTATGAAGAATTTTGCAATGTTGTTGGA
TCGATGGATGTGGATAAAAAAATGGTTGTTGATGTTTAAATGGGTGCAGG
ATATACACTCCCCGCCGATATGGTGACACATTTTGACGATGAAGAACTGA
AGAGACTTGGAAAGCGGTTCAGGAAGTTGGATACTGATAACTCAGGAACC
CTTTCAATTGAAGAGTTTATGTCTCTTCCTGAGCTCCAACAAAACCCTTT
AGTTCAAAGAGTCATCGAAATCTTTGATACAGATGGTAACAAAGAAATTG
ACTTTCAAGaatttatcgAGGGAATTTCCCAATTCAGTGTCAAAGGAGAT
AAAACACAGAAATTAAGATtTGCATTCAAAATATATGATATCAATCAAGA
TGGCTTCATTTCAAATGGTGAACTTTTTACAGTCTTACGTATGATGGTAg
gaaataatttgaaagaagTTCAGCTTCAACAAATTGTGGATAAAACTATT
TTGCAATTTGACACAGATGGCGATGGTAAAATTAGTTATGAAGAATTTTG
CAATGTTGTTGGATCGATGGATGTGGATAAAAAAATGGTTGTTGATGTTT
AAATGGGTGCAGGATATACACTCCCCGCCGATATGGTGACACATTTTGAC
GATGAAGAACTGAAGAGACTTGGAAAGCGGTTCAGGAAGTTGGATACTGA
TAACTCAGGAACCCTTTCAATTGAAGAGTTTATGTCTCTTCCTGAGCTCC
AACAAAACCCTTTAGTTCAAAGAGTCATCGAAATCTTTGATACAGATGGT
AACAAAGAAATTGACTTTCAAGaatttatcgAGGGAATTTCCCAATTCAG
TGTCAAAGGAGATAAAACACAGAAATTAAGATtTGCATTCAAAATATATG
ATATCAATCAAGATGGCTTCATTTCAAATGGTGAACTTTTTACAGTCTTA
CGTATGATGGTAggaaataatttgaaagaagTTCAGCTTCAACAAATTGT
GGATAAAACTATTTTGCAATTTGACACAGATGGCGATGGTAAAATTAGTT
ATGAAGAATTTTGCAATGTTGTTGGATCGATGGATGTGGATAAAAAAATG
GTTGTTGATGTTTAAATGGGTGCAGGATATACACTCCCCGCCGATATGGT
GACACATTTTGACGATGAAGAACTGAAGAGACTTGGAAAGCGGTTCAGGA
AGTTGGATACTGATAACTCAGGAACCCTTTCAATTGAAGAGTTTATGTCT
CTTCCTGAGCTCCAACAAAACCCTTTAGTTCAAAGAGTCATCGAAATCTT
TGATACAGATGGTAACAAAGAAATTGACTTTCAAGaatttatcgAGGGAA
TTTCCCAATTCAGTGTCAAAGGAGATAAAACACAGAAATTAAGATtTGCA
TTCAAAATATATGATATCAATCAAGATGGCTTCATTTCAAATGGTGAACT
TTTTACAGTCTTACGTATGATGGTAggaaataatttgaaagaagTTCAGC
TTCAACAAATTGTGGATAAAACTATTTTGCAATTTGACACAGATGGCGAT
GGTAAAATTAGTTATGAAGAATTTTGCAATGTTGTTGGATCGATGGATGT
GGATAAAAAAATGGTTGTTGATGTTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034197XLOC_034197Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054215-proteinTCONS_00054215-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054215-exon-scaffold_242-1491911889:530699..530806TCONS_00054215-exon-scaffold_242-1491911889:530699..530806Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:530699..530806TCONS_00054215-exon-scaffold_242-1510915933:530699..530806Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:530699..530806TCONS_00054215-exon-scaffold_242-1575043694:530699..530806Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:546095..546164TCONS_00054215-exon-scaffold_242-1491911889:546095..546164Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:546095..546164TCONS_00054215-exon-scaffold_242-1510915933:546095..546164Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:546095..546164TCONS_00054215-exon-scaffold_242-1575043694:546095..546164Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:546281..546299TCONS_00054215-exon-scaffold_242-1491911889:546281..546299Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:546281..546299TCONS_00054215-exon-scaffold_242-1510915933:546281..546299Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:546281..546299TCONS_00054215-exon-scaffold_242-1575043694:546281..546299Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:546765..546804TCONS_00054215-exon-scaffold_242-1491911889:546765..546804Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:546765..546804TCONS_00054215-exon-scaffold_242-1510915933:546765..546804Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:546765..546804TCONS_00054215-exon-scaffold_242-1575043694:546765..546804Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:547216..547392TCONS_00054215-exon-scaffold_242-1491911889:547216..547392Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:547216..547392TCONS_00054215-exon-scaffold_242-1510915933:547216..547392Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:547216..547392TCONS_00054215-exon-scaffold_242-1575043694:547216..547392Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:547544..547603TCONS_00054215-exon-scaffold_242-1491911889:547544..547603Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:547544..547603TCONS_00054215-exon-scaffold_242-1510915933:547544..547603Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:547544..547603TCONS_00054215-exon-scaffold_242-1575043694:547544..547603Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:548323..548507TCONS_00054215-exon-scaffold_242-1491911889:548323..548507Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:548323..548507TCONS_00054215-exon-scaffold_242-1510915933:548323..548507Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:548323..548507TCONS_00054215-exon-scaffold_242-1575043694:548323..548507Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1491911889:549309..550815TCONS_00054215-exon-scaffold_242-1491911889:549309..550815Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1510915933:549309..550815TCONS_00054215-exon-scaffold_242-1510915933:549309..550815Clytia hemisphaericaexon
TCONS_00054215-exon-scaffold_242-1575043694:549309..550815TCONS_00054215-exon-scaffold_242-1575043694:549309..550815Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:530699..550815 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
77.3239	76.6745	98.4068	96.4299	112.686	68.1766	99.9013	93.95	69.1234	37.056	38.4541	18.3049	36.2175	33.1793	20.9087	18.2415	21.569	32.5367	25.9078	28.4698	41.2849	48.3592	42.138	42.3379	29.8475	43.6838	51.5703	38.866	23.3634	25.4465
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
[Close]
BLAST of TCONS_00054215 vs. Swiss-Prot (Human)
Match: CANB1 (Calcineurin subunit B type 1 OS=Homo sapiens GN=PPP3R1 PE=1 SV=2)

HSP 1 Score: 250.366 bits (638), Expect = 7.656e-78
Identity = 117/154 (75.97%), Postives = 139/154 (90.26%), Query Frame = 3 
Query:  195 MGAGYTLPADMVTHFDDEELKRLGKRFRKLDTDNSGTLSIEEFMSLPELQQNPLVQRVIEIFDTDGNKEIDFQEFIEGISQFSVKGDKTQKLRFAFKIYDINQDGFISNGELFTVLRMMVGNNLKEVQLQQIVDKTILQFDTDGDGKISYEEFC 656
            MG   + P +M +HFD +E+KRLGKRF+KLD DNSG+LS+EEFMSLPELQQNPLVQRVI+IFDTDGN E+DF+EFIEG+SQFSVKGDK QKLRFAF+IYD+++DG+ISNGELF VL+MMVGNNLK+ QLQQIVDKTI+  D DGDG+IS+EEFC
Sbjct:    1 MGNEASYPLEMCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFC 154
The following BLAST results are available for this feature:
BLAST of TCONS_00054215 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CANB17.656e-7875.97Calcineurin subunit B type 1 OS=Homo sapiens GN=PP... [more]
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