TCONS_00054210 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054210
Unique NameTCONS_00054210
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1318

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054210 ID=TCONS_00054210|Name=TCONS_00054210|organism=Clytia hemisphaerica|type=transcript|length=1318bp
GCACATTATAAGAAGTTATGTGAATGTgttttaagaatttgtaaaaatca
atttcagatttCCCTTCATGAAATATCATCTAAAATAATATGTATTTGAT
AGTTTTTGATTTGGTAACAATTGTTATGATATGAATTGCTACGTCTTTCT
TATTACTTCTGTGATAGTAATAAGCTCTATAAACTTTTGTGCTGCAAGTT
ATGAAGATGATTTGCTCACCATATCTAGAGGTTTGGAGAAAGTCGCTTCG
TTCTATTCATCACATTATAAAGAAGTCAACTTAGATTCCATCTTTGGGTT
GAGAGCTGCAGAAGGTACATTGCACCACTTATTCACGAAACATGAAGACA
AAATACGAAAACTTCCAACTCATATTTTCACATCCATTGAAAAGAGTTTT
ATCTCAATACGTATATCTGCTGCAATGGGGTATCAAATATTGGATAAAGA
GAACGACAAATATCTTCAATCATTCAGGTACATAGTCGACAAGAAATGGT
TTCACAAATCTAACACTCGTTTACCGTTAGTCGCTGAAGCACCATCATCG
AGTCAGATTGTCAAAGCCAATGATGAATTAGATGAGAAATTCAGTGATAA
ATGTATGAAAGGTCTTTTGGGGACATCATCAACGAAAAAGAAATGTACAG
TTGAGGATGATTGCTGGTCGGTAATGAATAAGGAAGGCAATTTTGGATAT
ACGATCACTCATCAAGCTTTGTTTTTCATGCTTGGAATCTCTCTTGTTTT
GTCTTGGCAAGATGATATTGGATGTTACAAGGAACCGAAAAGTAATACAC
AAAATACTGGACAGCTGAGtgtGGACGAAGTAAAAGGACCATCGCGACGC
CTCCAAGAAGAACGAACTTTAAAAGGTGGCTGTCTATCGCATACAACTGG
TCTTCTTGTTGCATACCTAGCCGAATCCATTCATTGGCAAATCTCAAAAG
AACTCAACCAGCCAGGTTGGAGTTTACAATATCTTCATGATAGATTTAAA
GAAGGACAATATTATTATCAGTTGTTGTTCTATTGGATACCACTGCTCCT
GTTAGCTTCATATTTTTGGAGACAACGGAAAAAACGGAGGAAGAGTGAAC
TATTGCAACAATCTATTTAATTTTAGGCccatatttttataatctttgaa
aattttagatttcgctctttttcaaaaatctagatttaattttacaattt
ttttttacaagtgcaaaggaatcaaaaagtttataaaGTATTAGCTTTAT
TGCTTCTGCTACTTTTATGCATCATAAATTCACATTTTTGACCGTGGCCG
CCATTTGCCGCGCGGgat
Run BLAST on NCBI

protein sequence of TCONS_00054210-protein

>TCONS_00054210-protein ID=TCONS_00054210-protein|Name=TCONS_00054210-protein|organism=Clytia hemisphaerica|type=polypeptide|length=329bp
MNCYVFLITSVIVISSINFCAASYEDDLLTISRGLEKVASFYSSHYKEVN
LDSIFGLRAAEGTLHHLFTKHEDKIRKLPTHIFTSIEKSFISIRISAAMG
YQILDKENDKYLQSFRYIVDKKWFHKSNTRLPLVAEAPSSSQIVKANDEL
DEKFSDKCMKGLLGTSSTKKKCTVEDDCWSVMNKEGNFGYTITHQALFFM
LGISLVLSWQDDIGCYKEPKSNTQNTGQLSVDEVKGPSRRLQEERTLKGG
CLSHTTGLLVAYLAESIHWQISKELNQPGWSLQYLHDRFKEGQYYYQLLF
YWIPLLLLASYFWRQRKKRRKSELLQQSI
Run BLAST on NCBI

transcript from alignment at scaffold_242:477775..492296+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054210 ID=TCONS_00054210|Name=TCONS_00054210|organism=Clytia hemisphaerica|type=transcript|length=14522bp|location=Sequence derived from alignment at scaffold_242:477775..492296+ (Clytia hemisphaerica)
GCACATTATAAGAAGTTATGTGAATGTgttttaaggtggtagtctaccgc
cagatttcaaaagtcaaaaaatcacattttttgcaataactcaagaactt
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gatgttcagaaagacctaaggatctcaaaacacccaaaaaccaaaattcg
acaattttttcgatgattttccatttctcggtagactaccaccttaagaa
tttgtaaaaatcaatttcagatttCCCTTCATGAAATATCATCTAAAATA
ATATGTATTTGATAGTTTTTGATTTGGTAACAATTGTTATGATATGAATT
GCTACGTCTTTCTTATTACTTCTGTGATAGTAATAAGCTCTATAAACTTT
TGTGCTGCAAGTTATGAAGATGATTTGCTCACCATATCTAGAGGTTTGGA
GAAAGTCGCTTCGTTCTATTCATCACATTATAAAGAAGTCAACTTAGATT
CCATCTTTGGGTTGAGAGCTGCAGAAGGTACATTTTTCTCACTTTATCCg
ggggttacttaggcaaaatgggtgccgggtatgtgcaagCCATAAAGGTC
CATTTATCACCTCACtccaaaagtctctcaaaggagtacataaaactatt
aaaaagcaaattgagtttctgtaagggttccaaaataacgaaaatcaaaa
aaagaaaccccTCAAGagtcataaatttttgaaatttggactactgtaaa
atttgaataatttggctgaaattttggggaaatagtCTCTCTTAGAGTGG
CAAAAACGTCaagaaatggagaaaaaaagttcagtctctctaagggtcga
ttttcaaaccttggctcggacatacccgtcatctcgcaaacctaaagtct
attcacgataatattcatttacctataatttttgaaggaattcttcaatc
tttataaatttggtatcaatggaaagatattagtgagtggatcaatttga
aataaaaaaatttttaaacatattctaaaaatgaagatgaaaatgaagaa
gaaaaaaatgaagatcttgtagaaaggtgctataactatcattttcactg
aagtaaatccttgattatcgaacattatcactgtgaaaaaatttctcaaa
aataatcattaagtcaaaagatatcaagcaaagttataagctgattgacg
tctaaaaacgctgttttctgctgtttttgggggtcaatcacttattaact
ttgtatcataactttaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNCTTATCGTGAACAGGCtttagtaccccccccccctagtaccgTA
ACTTTACGATACAAACCATAACTATATCACTAAacaacttttatttaaaa
aaatagattaaatttttctAAGCCTTAGTTAGATAGGAGTAACCCTTTTC
AAtggaacacccctgtctcacagccccggtggagcttttcTTCCACAGTG
GGGATAATAATTCCTATCGAAAttcgaatggggataaaaattctgatatg
atatgatatggCTTATGGTCGATGCAGTGATTGTGCTCGATTAGGACCTT
AAAAACGAAATTTGGAACCTGTAGGATGCATAATCTGATATACTTTCCAA
AATCTAGTCTAAGAAGTGGTTAAAAATAATGCATGTCAAAGACTACTAGT
TTTATTACTGAGATGAACTCGTTtgcccgggggagggggtgggtactacc
cttgccgaccgacgggggtgtgTCACTGAacttcgaaaaatggaccctac
gtgggactcgttctTTTAACCCTGcggaatgggactgaaattccaaaatt
cagGTACCCTGGCCAGTGGCACATCTCCGTACCCCTTTTTCCCCAGTACA
CCCCCCCCCGGTTCGTTTGCATTTTTCTCATTCAGGAAAACTCCATGTCA
GCTCTCACTCTCAGGTTGTAATTTCAACACCTACGCATCGGTTTTATCAT
AATTGCTTCATCATTAAACGATTATTACAGGAAGCAGCCGTTACCACAAT
ATCAAACTTGTTGTagttatatcttttttttttttaaatgtcaaaaataa
aggaatatacaggaaaagtaatgaaaataataaagtGACTCTGCATTAAT
TGTGGTTGCCCAGAGCACAATGCTTTTTATTCCGTTAGCTTGAAATTGTA
CAATTCTGGATTGACACCGGAAATTAAGGAGTTGCAGTAATTGCAGATTC
TCTATTTCTCTATTTCTGGTTTCCACTAATTACATGAGAGAAGGCTGCTT
TCTcgcaatttttagttttttttaattttcaattcaaaagcTGGCGTATA
CGAACCTAAAACCAGGgatgtctcacagccccggtggaatttttttcaac
agtggagataaaaatttatatcaCAGTCCCAACGGGGCGGGGGTCCCAAT
GGGTCTGTAACACAGGATATTACCTACCAGTAGTACAACTCCCCATTGTA
ATTTCAAATATGAATATGTTTctaaaattctaatttttgcaTTCAGGTAC
ATTGCACCACTTATTCACGAAACATGAAGACAAAATACGAAAACTTCCAA
CTCATATTTTCACATCCATTGAAAAGAGTTTTATCTCAATACGTATATCT
GCTGCAATGGGGTATCAAATATTGGATAAAGAGAACGACAAATATCTTCA
ATCATTCAGGTATATTTCAGTTACCCCTCTATGTAAAATGCCCATAGACA
CACACCTTCCTCACAGGaaagattgtccaaaatatcgttcccgatggaaa
attatcctccgaTTTTTTGTCCCTACTGAAACTAATCAAATaaaatcccc
actgaattttctgacttaaaacacaaaagaattgaaatctccagccataa
aaaatatgggaatatcgatCCCCATTGAGTTCCAGTCCGTTATTATCCtg
ccgggtctgtgagaagggagtgtataaactggagtcgtttataatgtaCA
GTAATATTGTTGTTAGATAGTAGTACAATAATCGTAACATGATAAGATCA
GTTTGTTAATATGGTTTGATAATTTGATGTTCCTTTTTTGCTTGGTCCTA
CCTGTTTTTGTGGATGGCATGATTGGGTCTTTTTCCTTTTGTGATGACGT
GAGTCCAAatcttttttgtgttttttggtAATAGAGATAGTCTAGCAAGN
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NNNNNNNNNNNNCtcttaaaaatttcataaaatcaaTAAACTATTTGTCc
aatttcattttctcttttaaCATTTCAGTCTTTAGGTAATTGTTAGTTTC
ATTCGGTAACCATATCTGCATTCTATTCGACATCTCGGAATTTATTCAAC
AATTTCTCTGGGCTAAATTTTGTCTTGGTTGTAGTCGGTACTGTCCTTCT
CAGTGTACGCAATTTTGACTcgatataacttttttttttttttttggttt
ggtGCTCTGTGCAGTTCTTTAAATATTCGTGTTTCATTAAATAACAACTT
TATCAAGCATGGTTAAGTATTGAGTACTCAACACAATGAACGAAGTTTAC
TTTTGTTTCTGGGATAAATTTGCTGTTTTTCAGAAATTCTTTTCTTGTAC
TCGTAGATCTTTCGGTTGTGCCATTGGTTTTTCTGGTCGTATATTTTATC
ATCGTTGAGAATTCTCTCACTGATTTCTGGTTGCTGCTGGCTTTTCTCTT
GGTATTGTATTGTAAGATTTATCAACGATACGATATTCATAATCAGGATG
TACAACGTTGGTAAAATCATTTTCAGTAGCAGACTCAGTTGTACCTTGTT
TCTGCTTCGATTTATCTGGTATTTTCGGCATTTCAGTTGAAACCTCATAC
ATTCTGTCGACTGTTTTGTGGATATTTGAACACTCTCGTATGATTTCGGA
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NNGTTTGACGTTAAACTTCTCTTCTCGTTGAACTTTAAATAATTGATTTT
GTGTAAAACTctcgttttgatagtttttaATACTTTCTGATGTAAAATCA
CTTTTGTCCTTTTCAAAATAACGTGTCCTTAATCGCGAAATCAACCAAAC
TACCAATCAACAATAGTTCAGTTTCTGTGTAATTAAGTAGTATTCTACTA
CAATCTCTTACTTNATCCTCATTCAGTCCGGCGATGAGTGAGTCCAATTT
CTGCTCATTGCTGTAATTTAATTGATACACTAGCTCTTCGAGTTTTTCAA
GGTAGACATCTAGTGATGAACATTCCTCTTGTTTGAGGNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNTTGGGGTCACCCTTTAGTTATTGAGG
GGACCTCTCAGATCACTTATCTGTTCCTTCGATCAGGGTATCCCTTATTG
GGGATAAGTCTATGGACACGTAGTAAAAGTACGCTAATAGATTTCAATCA
ACATCAATTCTGTTTCTCCAATTAAGCAATAAATACCAAATAAGCGTAAC
ATAAATAACATCAAATAACTTAGTAGCTCTGGCATGTAATTAACGATAGT
TCTCTTTCAAGTCCTTCTCCTTCAAGTTCTCCTTTTCAAGTCCCTGAAGT
CCTTCTCCTTTAAGTTCTCCTTTTCAAGTCCCTGAAGTCCTTCTCCTTTA
AGTTCTCCTTTTCAAGTCCCTGAAGTCCTTCTCCTTTAAGTTCTCCTTTT
CAAGTCCttgatttctttccttttctcgCTCATGTTTGCTCGCGCTATTC
AGGGGTCTGGGCTCGAGGGCCTGAGCCCCACTCTATTGATTTCTATTCAT
CTTTCAGTTCATTAATATCGTGTTAGCTCAGTCCCAGTCTCTGCTTGCAT
TATTCATCAATGATTAGTTTACTAGCTTCAcagtattattagtattacac
gcgttataaacgactccacCAGTCTATAATAGAGAAAAAGGTAAGGTGTG
ATACGTgatttgggcttatttcttcaTTCTGCGTGACGAataaattttgc
caattttcacaATGAAAGATAGAAATAGATGTGATGGCGTGATGAAGGGC
GATTGTAATATGCTGCATTGCTTGGGACTaccccgggggtactagggttg
cgagctgactggTATGTACCGCCCGATTTTGACCCGCAGACCCTTAgcag
gactaaaaaggagaaaaaataggaaaattttgcgACTTTGTCGACCGTTA
CCGGGACTAAtctgaccaaattttgatctttcaaggagcaaaaagttgaa
attttcctatttttccgacccttagttggactgaaatttaattttctggt
tTTTCCAACCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNacccc
cccccccccccgagggAATAGCTAtcttatttaaaacaaattcaaacacG
ATTTCAGGTACATAGTCGACAAGAAATGGTTTCACAAATCTAACACTCGT
TTACCGTTAGTCGCTGAAGCACCATCATCGAGTCAGATTGTCAAAGCCAA
TGATGAATTAGATGAGAAATTCAGTGATAAATGTATGAAAGGTCTTTTGG
GGACATCATCAACGAAAAAGAAATGTACAGTTGAGGATGATTGCTGGTCG
GTAATGAATAAGGAAGGCAATTTTGGATATACGATCACTCATCAAGCTTT
GTTTTTCATGCTTGGAATCTCTCTTGGTCAGTTTACTCACAAATCTTTAA
GATTATAGATTTCCATTGACATTTTCATTCCCACCGACATAGGGGTGTGA
TATTAAAGAAGTTTtctacttttcaatttttttttaatggaaaCATTCCC
CTGTTAATTTTTGACCCGATCTTGACCCAAAAAACAAGGAGGTTTATAAC
CgtttctttaaatctttttctAAATTGGATGTATACTGCTTTGAGTAAGA
AACCCTTAACTCGCAGAACCAGACCCGATAGGGTTTCTCATATCATTTCT
TAAGCCAATGGGGGTAAAATGATAAATAACATTGAATCAATAACACAATA
TCTTTTGCAGttaggatttttttatttaagaatGTATTCAGCGGGGAAAA
AAACTGTAACTTTCCACTGGATACTTTTGCCAATCTTTTCTAGTAGGAGG
GGGACCCAGTGGATCTCTGAGCACGGGGTATAGTAAGTAAATTATAATAT
AATAGAAAGTAAATCCCTCATTGTTTATAGGATGTAAAAATGTATTTCAA
CAGAAACTGGGTTTCAAGACCAAACTTGAAGACCGTTTACATATTTTCGG
ATCACACATTTACAACCAAATGCAAGAAATTTCCCGAACCGGTTACCCGG
TATCCGAGCACGATCTGTTTTTAGAGCAAGCTGTGGTCTCCAGTTGGTTA
GGAATTAAAGGCTCAATGAATATGTATGATACACTTACAGTTTTGTCTTG
GCAAGATGATATTGGATGTTACAAGGAACCGAAAAGTAATACACAAAATA
CTGGACAGCTGAGGTAATATTATTTTGGAAGTTACCTGATTATAGAAAAA
CCGTCGAATACTAATGCATTAGCGAGATTATttatttgtgtttttctgcg
acggagacggtaaggttctaatttgactagatcctgactaactgaggacg
acggtaaatcagcacttttaccgtcctcgattttgcgggtcagagcTGTG
GGtcattccaaatcgcttcagtcactccaccgtcttcaaaaatgcaaata
cataaactcgctttaATTTGATTACCCATTCAAATCCTGGTCGAATTTAG
AATATAAATGGATAGTTTTGCTTTCAAGTGAAGAAGTGAAGATTCTAAAA
ATGTTTTGGATGTCATTGTAAAAGTCTCATCGGGTAGATAACGTAATTCG
ACCTGTTTGATTATCGTCCAAAATCTCCTGTTTTTAAGGAGAGGGCAAAA
CAACTTTACCACAGTTCAGTGTTGGTCGGACCACCGTGCTTTTGGTAAAA
AAAGGACTTTTTGAGCTATGTATGTTAGcctattcttttttctttttcta
gtgtGGACGAAGTAAAAGGACCATCGCGACGCCTCCAAGAAGAACGAACT
TTAAAAGGTAAGATTTGAATTCATTATTTCGCTGCAAAGcctttttatat
tatttttttgagaagAAAGATCAACGTTAACTAAGTCACGTGACGGAGTA
GGTTAATTTGAAAACTAAATTTATAGAATgttcaaataaattttcagaTC
GTCTTTGGACAATGTCAACTTTTTTACTTACGAACTCGGTGTAACCATTT
TCCAGAGCAGAGAGTCCGCCTTTTTCAaccattttattttttgcttcGGG
AAACCTAATCAGATGGAAATACTCTCTCTCCTGAATATTAGCGAGTTTAC
GTATCTGTGTTTTTCTGTGACGGAGAGGGTAAGCTTCTAATTCCTGACTG
ACTGTAGACGaaggtaaatcagcacttttaccgtcctcgatttcgCGGGT
TAAACTgtgggtttttccaaaatttttcagTCACTCCTCCTtcctcaaaa
gtccaaaatttgttAGAGAATGTTATGGGCGAATTTGATGACTCTTGTCC
CAACTGTTTTGTATTCGACAAAAAGGACAAACTCAAAAGActtctttaat
tttttatcatcctTTTTATCGACTCACAGGTGGCTGTCTATCGCATACAA
CTGGTCTTCTTGTTGCATACCTAGCCGAATCCATTCATTGGCAAATCTCA
AAAGAACTCAACCAGCCAGGTTGGAGTTTACAATATCTTCATGATAGATT
TAAAGAAGGACAATATTATTATCAGTTGTTGTTCTATTGGATACCACTGC
TCCTGTTAGCTTCATATTTTTGGAGACAACGGAAAAAACGGAGGAAGAGT
GAACTATTGCAACAATCTATTTAATTTTAGGCccatatttttataatctt
tgaaaattttagatttcgctctttttcaaaaatctagatttaattttaca
atttttttttacaagtgcaaaggaatcaaaaagtttataaaGTATTAGCT
TTATTGCTTCTGCTACTTTTATGCATCATAAATTCACATTTTTGACCGTG
GCCGCCATTTGCCGCGCGGgat

Coding sequence (CDS) from alignment at scaffold_242:477775..492296+

>TCONS_00054210 ID=TCONS_00054210|Name=TCONS_00054210|organism=Clytia hemisphaerica|type=CDS|length=5940bp|location=Sequence derived from alignment at scaffold_242:477775..492296+ (Clytia hemisphaerica)
ATGAATTGCTACGTCTTTCTTATTACTTCTGTGATAGTAATAAGCTCTAT
AAACTTTTGTGCTGCAAGTTATGAAGATGATTTGCTCACCATATCTAGAG
GTTTGGAGAAAGTCGCTTCGTTCTATTCATCACATTATAAAGAAGTCAAC
TTAGATTCCATCTTTGGGTTGAGAGCTGCAGAAGGTACATTGCACCACTT
ATTCACGAAACATGAAGACAAAATACGAAAACTTCCAACTCATATTTTCA
CATCCATTGAAAAGAGTTTTATCTCAATACGTATATCTGCTGCAATGGGG
TATCAAATATTGGATAAAGAGAACGACAAATATCTTCAATCATTCAGGTA
CATAGTCGACAAGAAATGGTTTCACAAATCTAACACTCGTTTACCGTTAG
TCGCTGAAGCACCATCATCGAGTCAGATTGTCAAAGCCAATGATGAATTA
GATGAGAAATTCAGTGATAAATGTATGAAAGGTCTTTTGGGGACATCATC
AACGAAAAAGAAATGTACAGTTGAGGATGATTGCTGGTCGGTAATGAATA
AGGAAGGCAATTTTGGATATACGATCACTCATCAAGCTTTGTTTTTCATG
CTTGGAATCTCTCTTGTTTTGTCTTGGCAAGATGATATTGGATGTTACAA
GGAACCGAAAAGTAATACACAAAATACTGGACAGCTGAGtgtGGACGAAG
TAAAAGGACCATCGCGACGCCTCCAAGAAGAACGAACTTTAAAAGGTGGC
TGTCTATCGCATACAACTGGTCTTCTTGTTGCATACCTAGCCGAATCCAT
TCATTGGCAAATCTCAAAAGAACTCAACCAGCCAGGTTGGAGTTTACAAT
ATCTTCATGATAGATTTAAAGAAGGACAATATTATTATCAGTTGTTGTTC
TATTGGATACCACTGCTCCTGTTAGCTTCATATTTTTGGAGACAACGGAA
AAAACGGAGGAAGAGTGAACTATTGCAACAATCTATTTAAATGAATTGCT
ACGTCTTTCTTATTACTTCTGTGATAGTAATAAGCTCTATAAACTTTTGT
GCTGCAAGTTATGAAGATGATTTGCTCACCATATCTAGAGGTTTGGAGAA
AGTCGCTTCGTTCTATTCATCACATTATAAAGAAGTCAACTTAGATTCCA
TCTTTGGGTTGAGAGCTGCAGAAGGTACATTGCACCACTTATTCACGAAA
CATGAAGACAAAATACGAAAACTTCCAACTCATATTTTCACATCCATTGA
AAAGAGTTTTATCTCAATACGTATATCTGCTGCAATGGGGTATCAAATAT
TGGATAAAGAGAACGACAAATATCTTCAATCATTCAGGTACATAGTCGAC
AAGAAATGGTTTCACAAATCTAACACTCGTTTACCGTTAGTCGCTGAAGC
ACCATCATCGAGTCAGATTGTCAAAGCCAATGATGAATTAGATGAGAAAT
TCAGTGATAAATGTATGAAAGGTCTTTTGGGGACATCATCAACGAAAAAG
AAATGTACAGTTGAGGATGATTGCTGGTCGGTAATGAATAAGGAAGGCAA
TTTTGGATATACGATCACTCATCAAGCTTTGTTTTTCATGCTTGGAATCT
CTCTTGTTTTGTCTTGGCAAGATGATATTGGATGTTACAAGGAACCGAAA
AGTAATACACAAAATACTGGACAGCTGAGtgtGGACGAAGTAAAAGGACC
ATCGCGACGCCTCCAAGAAGAACGAACTTTAAAAGGTGGCTGTCTATCGC
ATACAACTGGTCTTCTTGTTGCATACCTAGCCGAATCCATTCATTGGCAA
ATCTCAAAAGAACTCAACCAGCCAGGTTGGAGTTTACAATATCTTCATGA
TAGATTTAAAGAAGGACAATATTATTATCAGTTGTTGTTCTATTGGATAC
CACTGCTCCTGTTAGCTTCATATTTTTGGAGACAACGGAAAAAACGGAGG
AAGAGTGAACTATTGCAACAATCTATTTAAATGAATTGCTACGTCTTTCT
TATTACTTCTGTGATAGTAATAAGCTCTATAAACTTTTGTGCTGCAAGTT
ATGAAGATGATTTGCTCACCATATCTAGAGGTTTGGAGAAAGTCGCTTCG
TTCTATTCATCACATTATAAAGAAGTCAACTTAGATTCCATCTTTGGGTT
GAGAGCTGCAGAAGGTACATTGCACCACTTATTCACGAAACATGAAGACA
AAATACGAAAACTTCCAACTCATATTTTCACATCCATTGAAAAGAGTTTT
ATCTCAATACGTATATCTGCTGCAATGGGGTATCAAATATTGGATAAAGA
GAACGACAAATATCTTCAATCATTCAGGTACATAGTCGACAAGAAATGGT
TTCACAAATCTAACACTCGTTTACCGTTAGTCGCTGAAGCACCATCATCG
AGTCAGATTGTCAAAGCCAATGATGAATTAGATGAGAAATTCAGTGATAA
ATGTATGAAAGGTCTTTTGGGGACATCATCAACGAAAAAGAAATGTACAG
TTGAGGATGATTGCTGGTCGGTAATGAATAAGGAAGGCAATTTTGGATAT
ACGATCACTCATCAAGCTTTGTTTTTCATGCTTGGAATCTCTCTTGTTTT
GTCTTGGCAAGATGATATTGGATGTTACAAGGAACCGAAAAGTAATACAC
AAAATACTGGACAGCTGAGtgtGGACGAAGTAAAAGGACCATCGCGACGC
CTCCAAGAAGAACGAACTTTAAAAGGTGGCTGTCTATCGCATACAACTGG
TCTTCTTGTTGCATACCTAGCCGAATCCATTCATTGGCAAATCTCAAAAG
AACTCAACCAGCCAGGTTGGAGTTTACAATATCTTCATGATAGATTTAAA
GAAGGACAATATTATTATCAGTTGTTGTTCTATTGGATACCACTGCTCCT
GTTAGCTTCATATTTTTGGAGACAACGGAAAAAACGGAGGAAGAGTGAAC
TATTGCAACAATCTATTTAAATGAATTGCTACGTCTTTCTTATTACTTCT
GTGATAGTAATAAGCTCTATAAACTTTTGTGCTGCAAGTTATGAAGATGA
TTTGCTCACCATATCTAGAGGTTTGGAGAAAGTCGCTTCGTTCTATTCAT
CACATTATAAAGAAGTCAACTTAGATTCCATCTTTGGGTTGAGAGCTGCA
GAAGGTACATTGCACCACTTATTCACGAAACATGAAGACAAAATACGAAA
ACTTCCAACTCATATTTTCACATCCATTGAAAAGAGTTTTATCTCAATAC
GTATATCTGCTGCAATGGGGTATCAAATATTGGATAAAGAGAACGACAAA
TATCTTCAATCATTCAGGTACATAGTCGACAAGAAATGGTTTCACAAATC
TAACACTCGTTTACCGTTAGTCGCTGAAGCACCATCATCGAGTCAGATTG
TCAAAGCCAATGATGAATTAGATGAGAAATTCAGTGATAAATGTATGAAA
GGTCTTTTGGGGACATCATCAACGAAAAAGAAATGTACAGTTGAGGATGA
TTGCTGGTCGGTAATGAATAAGGAAGGCAATTTTGGATATACGATCACTC
ATCAAGCTTTGTTTTTCATGCTTGGAATCTCTCTTGTTTTGTCTTGGCAA
GATGATATTGGATGTTACAAGGAACCGAAAAGTAATACACAAAATACTGG
ACAGCTGAGtgtGGACGAAGTAAAAGGACCATCGCGACGCCTCCAAGAAG
AACGAACTTTAAAAGGTGGCTGTCTATCGCATACAACTGGTCTTCTTGTT
GCATACCTAGCCGAATCCATTCATTGGCAAATCTCAAAAGAACTCAACCA
GCCAGGTTGGAGTTTACAATATCTTCATGATAGATTTAAAGAAGGACAAT
ATTATTATCAGTTGTTGTTCTATTGGATACCACTGCTCCTGTTAGCTTCA
TATTTTTGGAGACAACGGAAAAAACGGAGGAAGAGTGAACTATTGCAACA
ATCTATTTAAATGAATTGCTACGTCTTTCTTATTACTTCTGTGATAGTAA
TAAGCTCTATAAACTTTTGTGCTGCAAGTTATGAAGATGATTTGCTCACC
ATATCTAGAGGTTTGGAGAAAGTCGCTTCGTTCTATTCATCACATTATAA
AGAAGTCAACTTAGATTCCATCTTTGGGTTGAGAGCTGCAGAAGGTACAT
TGCACCACTTATTCACGAAACATGAAGACAAAATACGAAAACTTCCAACT
CATATTTTCACATCCATTGAAAAGAGTTTTATCTCAATACGTATATCTGC
TGCAATGGGGTATCAAATATTGGATAAAGAGAACGACAAATATCTTCAAT
CATTCAGGTACATAGTCGACAAGAAATGGTTTCACAAATCTAACACTCGT
TTACCGTTAGTCGCTGAAGCACCATCATCGAGTCAGATTGTCAAAGCCAA
TGATGAATTAGATGAGAAATTCAGTGATAAATGTATGAAAGGTCTTTTGG
GGACATCATCAACGAAAAAGAAATGTACAGTTGAGGATGATTGCTGGTCG
GTAATGAATAAGGAAGGCAATTTTGGATATACGATCACTCATCAAGCTTT
GTTTTTCATGCTTGGAATCTCTCTTGTTTTGTCTTGGCAAGATGATATTG
GATGTTACAAGGAACCGAAAAGTAATACACAAAATACTGGACAGCTGAGt
gtGGACGAAGTAAAAGGACCATCGCGACGCCTCCAAGAAGAACGAACTTT
AAAAGGTGGCTGTCTATCGCATACAACTGGTCTTCTTGTTGCATACCTAG
CCGAATCCATTCATTGGCAAATCTCAAAAGAACTCAACCAGCCAGGTTGG
AGTTTACAATATCTTCATGATAGATTTAAAGAAGGACAATATTATTATCA
GTTGTTGTTCTATTGGATACCACTGCTCCTGTTAGCTTCATATTTTTGGA
GACAACGGAAAAAACGGAGGAAGAGTGAACTATTGCAACAATCTATTTAA
ATGAATTGCTACGTCTTTCTTATTACTTCTGTGATAGTAATAAGCTCTAT
AAACTTTTGTGCTGCAAGTTATGAAGATGATTTGCTCACCATATCTAGAG
GTTTGGAGAAAGTCGCTTCGTTCTATTCATCACATTATAAAGAAGTCAAC
TTAGATTCCATCTTTGGGTTGAGAGCTGCAGAAGGTACATTGCACCACTT
ATTCACGAAACATGAAGACAAAATACGAAAACTTCCAACTCATATTTTCA
CATCCATTGAAAAGAGTTTTATCTCAATACGTATATCTGCTGCAATGGGG
TATCAAATATTGGATAAAGAGAACGACAAATATCTTCAATCATTCAGGTA
CATAGTCGACAAGAAATGGTTTCACAAATCTAACACTCGTTTACCGTTAG
TCGCTGAAGCACCATCATCGAGTCAGATTGTCAAAGCCAATGATGAATTA
GATGAGAAATTCAGTGATAAATGTATGAAAGGTCTTTTGGGGACATCATC
AACGAAAAAGAAATGTACAGTTGAGGATGATTGCTGGTCGGTAATGAATA
AGGAAGGCAATTTTGGATATACGATCACTCATCAAGCTTTGTTTTTCATG
CTTGGAATCTCTCTTGTTTTGTCTTGGCAAGATGATATTGGATGTTACAA
GGAACCGAAAAGTAATACACAAAATACTGGACAGCTGAGtgtGGACGAAG
TAAAAGGACCATCGCGACGCCTCCAAGAAGAACGAACTTTAAAAGGTGGC
TGTCTATCGCATACAACTGGTCTTCTTGTTGCATACCTAGCCGAATCCAT
TCATTGGCAAATCTCAAAAGAACTCAACCAGCCAGGTTGGAGTTTACAAT
ATCTTCATGATAGATTTAAAGAAGGACAATATTATTATCAGTTGTTGTTC
TATTGGATACCACTGCTCCTGTTAGCTTCATATTTTTGGAGACAACGGAA
AAAACGGAGGAAGAGTGAACTATTGCAACAATCTATTTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034194XLOC_034194Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054210-proteinTCONS_00054210-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054210-exon-scaffold_242-1491911889:477775..477809TCONS_00054210-exon-scaffold_242-1491911889:477775..477809Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:477775..477809TCONS_00054210-exon-scaffold_242-1510915933:477775..477809Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:477775..477809TCONS_00054210-exon-scaffold_242-1575043694:477775..477809Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1491911889:479673..479951TCONS_00054210-exon-scaffold_242-1491911889:479673..479951Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:479673..479951TCONS_00054210-exon-scaffold_242-1510915933:479673..479951Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:479673..479951TCONS_00054210-exon-scaffold_242-1575043694:479673..479951Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1491911889:483321..483483TCONS_00054210-exon-scaffold_242-1491911889:483321..483483Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:483321..483483TCONS_00054210-exon-scaffold_242-1510915933:483321..483483Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:483321..483483TCONS_00054210-exon-scaffold_242-1575043694:483321..483483Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1491911889:489632..489900TCONS_00054210-exon-scaffold_242-1491911889:489632..489900Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:489632..489900TCONS_00054210-exon-scaffold_242-1510915933:489632..489900Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:489632..489900TCONS_00054210-exon-scaffold_242-1575043694:489632..489900Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1491911889:490615..490687TCONS_00054210-exon-scaffold_242-1491911889:490615..490687Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:490615..490687TCONS_00054210-exon-scaffold_242-1510915933:490615..490687Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:490615..490687TCONS_00054210-exon-scaffold_242-1575043694:490615..490687Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1491911889:491226..491281TCONS_00054210-exon-scaffold_242-1491911889:491226..491281Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:491226..491281TCONS_00054210-exon-scaffold_242-1510915933:491226..491281Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:491226..491281TCONS_00054210-exon-scaffold_242-1575043694:491226..491281Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1491911889:491854..492296TCONS_00054210-exon-scaffold_242-1491911889:491854..492296Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1510915933:491854..492296TCONS_00054210-exon-scaffold_242-1510915933:491854..492296Clytia hemisphaericaexon
TCONS_00054210-exon-scaffold_242-1575043694:491854..492296TCONS_00054210-exon-scaffold_242-1575043694:491854..492296Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:477775..492296 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0639815	0.031196	0	0	6.37515	7.21493	7.21795	6.10487	4.45618	4.04571	2.11155	2.89671	4.32221	3.06615	5.95362	6.37214	6.23441	4.41587	4.17061	3.55267	3.06906	2.73816	1.69675	2.59668	1.24967	1.28353	0.706308	0.747326	4.49708	3.51663
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR031751DUF4735
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054210 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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