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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054185 ID=TCONS_00054185|Name=TCONS_00054185|organism=Clytia hemisphaerica|type=transcript|length=3492bp
accgTATTTTTCTAACATTACACAGttATGCTCTACTTATGAATCAATCA
ATGCAAATCAAATAATCTTAAGAGGTTttaaaaatatgagaaacaATGGC
TCTTCGCCCGTGGCCAATCTTGTGCAAATTGATTCAAAAGAGAACATATA
GTTGTCTGTCAACACCATCTGGGATCTGGTTTGCATTCTTTGGACTTTGT
ATTATTGTGGTGTCAGCCTTTCACTTTGGGGAAGTGTTTTTACAATGGAG
TATGATGCGGTATGCTGGAAATTTTCATATCAGTCGTTATTATGATAACA
TTGCAGGGAAGTCCTTTGAACCAAGGTTGTGTTTACCGCAACCTATTGAT
ATAGTCTACACATGGGTCAATGGTAGTGATCCTAAATTAATtcagaattt
gaataaaattaaaaatgagcTTGAAGCTGAGTTGAATAGGACTTCGTTCA
ATACGTTTCAAGAAAAGAAGAAACGTGGAAAACTGATAAACGACAATGCT
TTCAAGTGGAAAGATAAACATAAATGTCCTCTGCCAAATTGTGTTCCCTC
AAACCGTATTGCTGTATCAGGGCTGAATAGAGGAGTCACATTATACCAAG
TTAAAGCAATTAATTCATATTTTGGTGACGTCCAGAATCTTGAGTTTTGG
GATGAAGACTCAGATGTTGTGTTTATATCTTTCAAAGACTATGACAATAT
TGGTAAAATCATGAACACAACCTGTTTGTTTAAGAAATTACCGTTGAATA
TCAGTGAAGTTTTTTACACTAGTACTGTGAAGCTTGGTCATAAGAAGCTG
GATGATGTTGTTATGGTACATGAGTATGATTCAAATTCTGAATCTGAAAT
TAAATCAATTGTATCATTAAAAGTTAAGGACTCTGTAAATTATGTGAAAA
GTTATCCAGACCAAAAAGTCACTATCGTTAGTATGTCAACTAAAGATGGC
TTCaaacaattaagaacaattcCTAAGAAGGATTTGAAGCTTAATGGAAA
ATCTTTCAAGTTCTTTCCAGTAACTTATGTTTGGAAACCAGTTGCTTTGA
GAATCGATAATTCAAACCAAGATATGTCAAGTAATCGTTTCGCAGACAAT
GATGAATTGAAATATTCATTGAGATCTGTAGAGAAATTTGTACCATGGAT
TCGTAAAATATTTATAGTGACAAACGGGCAAATACCTAGCTGGCTAGATT
TGCATCATCCTAGAATACAACTTGTAACACATgatgatatttttgtaaac
aaaactcaCTTGCCAACTTTTTCCTCGCCTGCCATTGAAGCACATATTCA
CCGGATCCCTGGactatcaaagaaatttatataCATGAATGATGACGTGT
TCTTTGGAGCACCTGTTTGGCCTGATGATTTTTTCACTCATTCTAAAGgt
cataaaatttatttatcatGGGCTGTACCAAATTGTAACGAAGGCTGTCC
AGCATCTTGGATCAATGATAAATATTGCGATAAAGCATGTAATGTGACTG
CTTGTGATTATGATGGAGGCGATTGCATTGGGAAGAATGCCAAGAAAGGA
TCTTGGAATCTTCATCAACAAGAAGCGCAAAGGTTCAGTAATAGTCGATT
ATCAGAGTATTGTTTCAAAGGTTGTGCGTTGAATTGGGTTGGTGATCGAT
ATTGTGATGGGAATTGTAACCATGCTGAATGTGCATTTGACGGGGGTGAT
TGTGGTGTATCTAACTACCATATGTTGTTCTcacaaacctttaaaaaaga
cATTTTCAAAGGTGTTGGTTCTGTTATTCAGCCACCTGATGGCACGCTAG
CAATGTTTGTGAATTTCACCAATATTTTTGATTCCGTTATCGAAGGGACT
TTTACAGACGCCCCTGTATTACGTAATGCGATCTTATCGAAGAAATTTAA
AGTTATGTCGAtgactttctttaaaaacatgACTGAAAATGTTATTGATT
TCCAGATACTTGGTTATCGTGGAGCCAACCAAACAGATAAGTCTGTTGca
atgtttaaaattaacaTCACAACACTTGCACAACAAACTGCTCATCCAGA
CAAACTTAAAGACAATGCTACCAAAGAAATCATTCCAACAGCACTCTATC
CAAATCATTTGAAAAATCTAAAGCCGGCTCTTTTGAATACGAATCTTGAA
GATAACCATTATCCAGAAAGCTTCGTCAACATTACATTACCTGAGGACCT
ATCATTGCAACGAGCAGAAATTAGACATGATTTTTCGACTGGTGATATTA
CAGAGCTTGGTTATAATAGGAGCTTGGCTTTATTATATCAAGAGTATTTG
AATCTGCAACCTATCTCTCAGAATGGTCGTAAACTTCTTTGGCTGCAAGA
GAACAATGCGAAGCCTTCTTCACAGAATTCGTATAACTGCTTGAGAGATC
CAGATTGCGTTCTAAGCTTTCTACCTTGGGAGCGCGGGAAAGCTGGAAAA
GATTCCCTTTCAAAGATTAAGAAAATGCTGACTTTACAAAATTACCAACA
ACTGGAGCTAGGGACACGACGTCGGCTCTTTGACGCCTATTCATCGTCAC
TTTTACATGTCAGCCGAATCTACAACAAAGCGTTTGGCTACAAGGCGAGG
AAAGTACCAGCTCATATGCCACACATGGTGGATCGAGATATCATTTATGA
AATGCAGACTAAGTTCTGGTCTTTTTTCGATGCTACTTCGTCTCACAAGT
TACGTCATCCTCAAGATATGCAATTTGCATTTTCGTTCAATTACTTCGTC
ATTGGAGTCAAGAAAAGCAAGAATCTATTCCaactttttgatgaaattga
tacTGATCATTCTGGCACATTGAATGACCGTGAGTTGCGAACATTGACCG
CTGTTCTTTATCCTCTCCCAATCTCCATCAAACAAATTCATGCTGTAGAA
GAAAACCTCAAAAATTGTTCACGTAGACTCATAAACTCGTACAATTACAT
CCTAAACGATACGTCAACTTTACCATCTACATCGCAACCGACTGAGCATT
TTGACGATCAGTTGCCGTTGGTAACGAAGGATTTATTTATCAATTGTCAT
GAGGTTTGGAAACTAGTTAACAAAACGGACGATTCTAAATACCAACATGA
AATTATGGGTGAGGACGATCTAGCCTTTAAGATGATTCATAATAACGTAA
CGACTGTTTTACATCAACTAGACTGGGTTCGCAAAAATCGAAAGAAATTT
ATCTGCATCAATGACGATCTCGATCATGACCGCGCGGACTCGAAAACCAT
CCGCCGCGTTTTAAGAGATTTTTATGAATCATTCTTTCCGATTCCTTCTC
AGTTTGAGCTAGAAGGGAAATACAAGAATAGATTTTTGTATAAACGAGAC
TTAGAAGAATGGACTCGACAATCCAAATTGATTTCAGATGAAgtacattt
ttttgttgttcTGCTGGTATTAGTTCTTGCTGTTTATTTATTCCGTAAGA
AAGCCTTACACTGTTTCAAAGTTATTATGAGACTTTTCTTCA Run BLAST on NCBI transcript from alignment at scaffold_242:123517..133984+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054185 ID=TCONS_00054185|Name=TCONS_00054185|organism=Clytia hemisphaerica|type=transcript|length=10468bp|location=Sequence derived from alignment at scaffold_242:123517..133984+ (Clytia hemisphaerica)
accgTATTTTTCTAACATTACACAGGTAAGGCAAGGAAATTTGTTTGAGA
CTACTTTCAAAAGACGAGCCTTTCTATCATATACTTTTCATCCAGCTATT
CAGCTCCAGACTGAGGTCTGTGAGATCCAGATTCAGCAGTAGTCAGTAGT
GTAGAGTAGAGCAGCATGCAAACTAATCCAGACGTACTAATCAATGAATT
TGGTTAtggaagtaatcaataatgatcaaAGTAATTGAACAACCACTTAT
CAATTAGGCGgatctttaaaaattgtttggttcccggaCGGTTCCCGTCA
TTTTGACTTTACAAattgggtcggtcggtcggtcggttggtcggtcggtc
ggtcgaaaatatttttttgtacatacATACCATCTTTGTTCATTGTAGGT
ACCtgcagttaggaacatttggcaagttcctgtacgcgaccgcgatctaa
aaaatcataacaacactcattaaaaaatgacgttcgtgtcttttcgcact
ttttttagcctagacgatgtagcaaacatagtaaatataagcacactgtg
cttttaattggctgaaattttttttgcgtcggaaaaactttttcaaacgt
tcagcaatgattgaccaaactgttacaatgaaatttatccagcgcatttt
ttatcttcttatcttcttaatcttcaatgaagcagggaaaccatccagga
tcctgccatcctataagccagcaaaaactaaatgccacttgtaaacttaa
gtttcttactattttccatcaaaaacaaccaaNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaacaaattatc
ttccaagattatggcgcccttttggatctattgttatggccatctaaaat
ggtggaaagagttgcggaaagacaggggcgcccgcttgtttcgagggtgg
taacgccaaaacgcccaatatgatcttccaacaaaaggcaagttagttac
cgcgcgagttacgtcatacactccaccgcaCCTCACAACCAATGGTGTTT
TAgtaaatatcaataattataagaacatcttatgtgcttacattcagtaa
actttgagtgcttcaacTGACCTGCATTGTGAGCCCCATAATCATCATGC
AACATCTTGTTTTTTAGAAAGTGATGCTTCGCGAGCGTGGTCTGCTTCCA
CGAAGGTCCGAATTATGAAATAGGGttaaaaaatcgggaaatcatgGATA
ATCTGGTTTTCGGTTCACTTTCCGCTGGCGCGCCGCGCTCgctattttga
tttgaaaacttgtaaacactgaGCGCGCAGAGGTTGACAATTAGGAATCC
AGAAGTGGCAAAGGGGGTCTCCGACTCTCTGACTCTAACTTCAGAGTAAA
AATCAGGGTCGGCccgatgacgggaaccaaataaTTTTTAGAGATCCGCC
TtaacaataaattttaaaaaaatgtgaGTTTTTctagacctttttgcctt
tccatccgccatatagaccttttttcaaagaggccaccctgttgaataat
tatgttatgtagtccagcagaaaaaacaatgataaaaccatgcataatta
ttacaatatgcatgatacagtaattatgcatggctctatcattgttttta
tagctggactacataattattcaacaggaggtcctctttgaaaaaaggtc
tattgaatagtattgaattgtatgcaaaaattatggtggccaaattgctg
tGGCAGATTCCCTTAGAAAgcatgcaaaacatatgcaaaaagaaagttac
atgcataattggcattatgttagagtgtaatcttgtagaagaaagatatt
aaaatttgcttcttttgaaaactagaaataatcaaatttgctCATCTCTT
GGAACGaacacttcaaaaaaccataacatagaccttttcgcctttccatc
cgccatattgaattggatgcaaaaattatggtggccgaattgccgtggtg
aaattcccttagaaagtattcaaaacatatgcaaaaagaaagtatgaaaa
aaaacttacatgcataattggcattatattaaagtgtaatcttgtagaag
aaagattaaatttgcttctcttgaaaactaaaaacaattataatcactca
tctcttagaacaagcacttcaaatgaccataacattagacataaactcaa
gctgaaaaatcacccgggAAGGTACAAAACTAATCCTTATTCGGCCGaca
gtaaattattctcctgggaatagaaccgccgccaaatgatcaaatcaaaa
cattgatctgaacccgctgaGTGTGACGTCGTGaatactgctttcagttt
gtgtgttttgaaagtttgatgtacCTTAaagaaggtacaaaaataatcct
tatttggctgacggtaaattattctcctgggaatggaaccgccaaatgat
caaatcaaaacattgatctgaacccgctgagtgtgacgtcataattactg
ctttcagtttgcgtgttttcaaagtttgatgtgtgtactccgtcttggtg
gaattttttaatggcatgaaaacagtcTTCAAGACGCAATGTCTTCAAGA
ACatatttctaaaaggcttttgttgttctgtaaatatttctttttggatt
aagaaattccatcttttattgttctaatgattataatatttctttataag
atgctttgttttctttttaatctttgtgtaaacttgcatatgttttgcat
attttctaACTAAATACAActaccgtaaatcctcgaataagcgcccgggc
gcttaattaatttttcaggctctaaggggggcgcttattcgagcagggtg
cttatttttttattgcagaaATTCATATCAGcaaattcggaatctgcttt
taaaaaaaaacttaactaATTCAAAgggttgaattttcaaaaaaggatga
ataaaagaaaaattggaaaaatccaactgacatcattttattcttaatcg
ctttctttctttttaagacacaaatatctactcaatatcttattcaatca
ataacaatattcgAATAAGCGACCCCCGTGAGATTCTGACACCTTTCTTT
AGAGACAGAAAtgatatgaaagcttgaatcactgattgaaaaaggattat
tctctGATcaataagcaaagaaaaacagtttcaacctttctatcaatttc
agctgataaaaagggtgtcggaattagacggtAGTATTTGTTCGCTTCGT
TATTTTATCAaacaattttaaccaaaacaaacagcccaatgtttatgtct
cgtgttccttttgtttagCCGGTTCGCGCGGCCCTTAAATTTTGCCGACA
GTCtgtctttttttgtgaaatgctGCTATTCTGTTGATTACCGtagaatc
gtctaatatcgacatgtgTCTTGTTATCTCGACATAGCtctaggctggtc
ttcgaaataaaaaatcaaactgaatcaaacataaacaaatacataccaaa
gtttccaatcaatcactaaattctactctccctatcacgtcacagattgc
tGATACTGTagatgagaaatgtgaagtgttattgcttatgtttgaaaaga
aaactttaatgaTGTAGtcatcactaaaaaactaattagcatgctttcaa
cgaagatacccaaatcaaaacaacattttgcacgcaaggaattttttagt
aaacctttttaccgtgagcagaaattttaaaaagaacccggtttcctttt
gaatttaatgtgaccgccatactggccatcacggcGTGCGGCTTCTAAGT
GCCTTGAGCGTGTGTTTGTGATAAAtaacatggtttcagcccacttttca
ggtgcccttattgagcatggtgcccccagcaatttaggtccccttgaaaa
attgctttgagttaggtacccctattcagcagataatttctttgaattga
cactttttgttcttttgtcatttctAAAATCATGCTCAAGCATGAACGCC
TGCTAATAagctttgttgttatgctataaagatggtggctgtaaatcaaa
acaatcacattagaaaaatatagcaaaagatggcgtgatgggaaacaaaa
gaaaaattggatgggaaactaggtgctggggtaaaaaaattcaataattt
gaaatattttgaaatattaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNttaatgaataggtaaccccaaagaattgcaaggcattagcc
cccctctactaacctggcctaggtgcccttcagatttctgggggggggcT
GATACCATGAAAGTAAGGGGAAACCAGGCCACTGACTTGaatgaagcgta
ataaagttgtaaaattttaatgatgggcacgagaaagtttgcatgcgttt
catgTTTCATATGTTGTGCAAgattgcttataatttggctgcttttttaa
ttgaatgaattgcaatgtttactgaatattctagtttgatggatgaactt
gtttgataagaatgatagcaagaatttttttttgttttgattattttaca
gattcGGTGTCGACTTAAAAGGAGAGGTGTCGACTTTAAAGGAGAGGTGT
CAAGGACACCTTAGACGATTCTACGGTATGACTACAGAGATAATTAATTC
TGGCAACTTTCAGATAGATAGATGTTTTGGCAAACAtgacagtcttttga
ataactaattactccacagtagttacctagagacaagataatttttatca
tgtttttattggctgagggaaagtaatgtatgtagagtgattggttattc
aaaagactgttaCATTTGCCAAAACATCTATCTAGCCTGATCTGGATTGG
ATATcatcgaaatcatcaaaatttcagaaaaaaaattcttacctTAACAT
ttaactctaaaattttagagtctggtgcaactaaaaaagtctggtacagt
ttgtttgataggTACTGTATgcgagtgaacccttgttgacagaatctcaa
aactttactttggaaacccagacagatacacataattacttaccataaaa
tttctttaaaacaaactggaaaaactggaaaaactaCTTTATAAACTACA
TTGAAACATCAGTCACATCTATAAAGGCTCCTTTTCATTGTggttttgtt
tagaaattttAATATCCATAAATTATGCTCAATGACTATGTGCCAATCGA
ACAATCACATACACNATCCATAAATTATGCTCAGTGACTATGTGCCAATC
GAACAATCACATACACTcgcactcgcatatgcagggacaaatatccctgc
agacaAGTTAGTTTGACAAGAgataagattataaaaaactagacagtgaa
atagtttacagtctggatatccaggatACTCCTAATTGTTAGTgatgtca
tgcataattatgtttTAACACCATTATTAAATTTGAGGTTACACGTACAG
TAGCCATTGAGAATTCGCCATCGTCTGAATTcccgccatcttgaaattat
gatCTAGCATGGTTTTTTATTATCCAACCACAGTGTTTTATTTACCCGCA
ATTCTGTCGGCCAATATTACTCGCACGGCAAATATGAGATTCTAAAATGG
CAGCTCTAGAGAGCGAAGctgtgtagttcatttgttttaaaattttctgt
gTGACAAGGTTATAAAAGAGTAGACAGTGAAATAATTTAttgtctggata
tccagggtaGGTTTATCATACTTTTTGACTTAAAGCTTTATGGAACTTGT
TCTATAGTGAAGGTCAAGCAgttcaaaagtttctaaatgtCACCCATAAA
AAGTTCATTTAATAAAAAATGCTGATCTCCTGTGCAGATAGCAGAAATTG
GGAACTTTCACTTTTAATATGTTGGATTTGGaacatttttaattcaaaac
tgTCTAACTTTGTCTTTAACTTCTAATACTCTCTTATAGGGGTTTAAGCA
GTACCAACCAGACTGAAActttaattaaaatttcaatgtttttggcttag
aaaaaaaaacatatggtGTTCAGATGAGTCCTACCTGGTTTACTACTAAA
ATTTTGACACTTATTTTACAAGTGTTAATataataattcaattttcaaat
tttcaattactTAAATAAAGAAAAGGTATGATGGTCTTATTTTATTCAAT
AAGATATGTATAAAATGGGTTCATATTGATTTAAAAgacattatttttat
tatttttcagttATGCTCTACTTATGAATCAATCAATGCAAATCAAATAA
TCTTAAGAGGTTttaaaaatatgagaaacaATGGCTCTTCGCCCGTGGCC
AATCTTGTGCAAATTGATTCAAAAGAGAACATATAGTTGTCTGTCAACAC
CATCTGGGATCTGGTTTGCATTCTTTGGACTTTGTATTATTGTGGTGTCA
GCCTTTCACTTTGGGGAAGTGTTTTTACAATGGAGTATGATGCGGTATGC
TGGAAATTTTCATATCAGTCGTTATTATGATAACATTGCAGGGAAGTCCT
TTGAACCAAGGTTGTGTTTACCGCAACCTATTGATATAGTCTACACATGG
GTCAATGGTAGTGATCCTAAATTAATtcagaatttgaataaaattaaaaa
tgagcTTGAAGCTGAGTTGAATAGGACTTCGTTCAATACGTTTCAAGAAA
AGAAGAAACGTGGAAAACTGATAAACGACAATGCTTTCAAGTGGAAAGAT
AAACATAAATGTCCTCTGCCAAATTGTGTTCCCTCAAACCGTATTGCTGT
ATCAGGGCTGAATAGAGGAGTCACATTATACCAAGTTAAAGCAATTAATT
CATATTTTGGTGACGTCCAGAATCTTGAGTTTTGGGATGAAGACTCAGAT
GTTGTGTTTATATCTTTCAAAGACTATGACAATATTGGTAAAATCATGAA
CACAACCTGTTTGTTTAAGAAATTACCGTTGAATATCAGTGAAGTTTTTT
ACACTAGTACTGTGAAGCTTGGTCATAAGAAGCTGGATGATGTTGTTATG
GTACATGAGTATGATTCAAATTCTGAATCTGAAATTAAATCAATTGTATC
ATTAAAAGTTAAGGACTCTGTAAATTATGTGAAAAGTTATCCAGACCAAA
AAGTCACTATCGTTAGTATGTCAACTAAAGATGGCTTCaaacaattaaga
acaattcCTAAGAAGGATTTGAAGCTTAATGGAAAATCTTTCAAGTTCTT
TCCAGTAACTTATGTTTGGAAACCAGTTGCTTTGAGAATCGATAATTCAA
ACCAAGATATGTCAAGTAATCGTTTCGCAGACAATGATGAATTGAAATAT
TCATTGAGATCTGTAGAGAAATTTGTACCATGGATTCGTAAAATATTTAT
AGTGACAAACGGGCAAATACCTAGCTGGCTAGATTTGCATCATCCTAGAA
TACAACTTGTAACACATgatgatatttttgtaaacaaaactcaCTTGCCA
ACTTTTTCCTCGCCTGCCATTGAAGCACATATTCACCGGATCCCTGGact
atcaaagaaatttatataCATGAATGATGACGTGTTCTTTGGAGCACCTG
TTTGGCCTGATGATTTTTTCACTCATTCTAAAGgtcataaaatttattta
tcatGGGCTGTACCAAATTGTAACGAAGGCTGTCCAGCATCTTGGATCAA
TGATAAATATTGCGATAAAGCATGTAATGTGACTGCTTGTGATTATGATG
GAGGCGATTGCATTGGGAAGAATGCCAAGAAAGGATCTTGGAATCTTCAT
CAACAAGAAGCGCAAAGGTTCAGTAATAGTCGATTATCAGAGTATTGTTT
CAAAGGTTGTGCGTTGAATTGGGTTGGTGATCGATATTGTGATGGGAATT
GTAACCATGCTGAATGTGCATTTGACGGGGGTGATTGTGGTGTATCTAAC
TACCATATGTTGTTCTcacaaacctttaaaaaagacATTTTCAAAGGTGT
TGGTTCTGTTATTCAGCCACCTGATGGCACGCTAGCAATGTTTGTGAATT
TCACCAATATTTTTGATTCCGTTATCGAAGGGACTTTTACAGACGCCCCT
GTATTACGTAATGCGATCTTATCGAAGAAATTTAAAGTTATGTCGAtgac
tttctttaaaaacatgACTGAAAATGTTATTGATTTCCAGATACTTGGTT
ATCGTGGAGCCAACCAAACAGATAAGTCTGTTGcaatgtttaaaattaac
aTCACAACACTTGCACAACAAACTGCTCATCCAGACAAACTTAAAGACAA
TGCTACCAAAGAAATCATTCCAACAGCACTCTATCCAAATCATTTGAAAA
ATCTAAAGCCGGCTCTTTTGAATACGAATCTTGAAGATAACCATTATCCA
GAAAGCTTCGTCAACATTACATTACCTGAGGACCTATCATTGCAACGAGC
AGAAATTAGACATGATTTTTCGACTGGTGATATTACAGAGCTTGGTTATA
ATAGGAGCTTGGCTTTATTATATCAAGAGTATTTGAATCTGCAACCTATC
TCTCAGGTGAGGTTATACATACAATGCTCAATAGTTTTTTTGATAGAGTT
GACTTAAAATTCAGAATATTTCATAGTTGGGGTTCCATTGTCTTTACCTA
TCTGAACCACTTAAAATATTTAGTCGAGTCTTTTATAAGTTGGTAATACA
CATAAAATATCACCGAAcccttttaaaaactttatcaCTGTTCGATTTTT
AGAATGGTCGTAAACTTCTTTGGCTGCAAGAGAACAATGCGAAGCCTTCT
TCACAGAATTCGTATAACTGCTTGAGAGATCCAGATTGCGTTCTAAGCTT
TCTACCTTGGGAGCGCGGGAAAGCTGGAAAAGATTCCCTTTCAAAGATTA
AGAAAATGCTGACTTTACAAAATTACCAACAACTGGAGCTAGGGACACGA
CGTCGGCTCTTTGACGCCTATTCATCGTCACTTTTACATGTCAGCCGAAT
CTACAACAAAGCGTTTGGCTACAAGGCGAGGAAAGTACCAGCTCATATGC
CACACATGGTGGATCGAGATATCATTTATGAAATGCAGACTAAGTTCTGG
TCTTTTTTCGATGCTACTTCGTCTCACAAGTTACGTCATCCTCAAGATAT
GCAATTTGCATTTTCGTTCAATTACTTCGTCATTGGAGTCAAGAAAAGCA
AGAATCTATTCCaactttttgatgaaattgatacTGATCATTCTGGTATG
TATACTGTTTTATAGTTCTTTACTCGCTCACTTTCATCTGTTTTTAATCA
CTTTATGGTTTTAGTCACCTGCATATACCAGGGTACTGCAAGCTCCATCA
AAGACAAAATTAGTAATAAGATCTCATTTTGATTATTCAAAATCTTATAA
TGCACCTAACAGCTCGTAAAGCATGAGTAAACTGTGTGAGAATTCACCAG
GAAGGAATGTCGTCGAAATGTCTGTATCTGTAGCAAAATCAATGCAACCA
CTCTATAAACATTAATTGATATCAATTCTTCCTGGTTAACTGTAACTCAG
TCTCCTAAACACGTTAAGTTTTTATATATTGTGTTTATATGTACAAGCCC
CCtgtttatttcaatatttttcatctttcatatTTCTCAGGCACATTGAA
TGACCGTGAGTTGCGAACATTGACCGCTGTTCTTTATCCTCTCCCAATCT
CCATCAAACAAATTCATGCTGTAGAAGAAAACCTCAAAAATTGTTCACGT
AGACTCATAAACTCGTACAATTACATCCTAAACGATACGTCAACTTTACC
ATCTACATCGCAACCGACTGAGCATTTTGACGATCAGTTGCCGTTGGTAA
CGAAGGATTTATTTATCAATTGTCATGAGGTTTGGAAACTAGTTAACAAA
ACGGACGATTCTAAATACCAACATGAAATTATGGGTGAGGACGATCTAGC
CTTTAAGATGATTCATAATAACGTAACGACTGTTTTACATCAACTAGACT
GGGTTCGCAAAAATCGAAAGAAATTTATCTGCATCAATGACGATCTCGAT
CATGACCGCGCGGACTCGAAAACCATCCGCCGCGTTTTAAGAGATTTTTA
TGAATCATTCTTTCCGATTCCTTCTCAGTTTGAGCTAGAAGGGAAATACA
AGAATAGATTTTTGTATAAACGAGACTTAGAAGAATGGACTCGACAATCC
AAATTGATTTCAGATGAAgtacatttttttgttgttcTGCTGGTATTAGT
TCTTGCTGTTTATTTATTCCGTAAGAAAGCCTTACACTGTTTCAAAGTTA
TTATGAGACTTTTCTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054185-exon-scaffold_242-1491911889:123517..123541 | TCONS_00054185-exon-scaffold_242-1491911889:123517..123541 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1510915933:123517..123541 | TCONS_00054185-exon-scaffold_242-1510915933:123517..123541 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1575043694:123517..123541 | TCONS_00054185-exon-scaffold_242-1575043694:123517..123541 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1491911889:129927..132222 | TCONS_00054185-exon-scaffold_242-1491911889:129927..132222 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1510915933:129927..132222 | TCONS_00054185-exon-scaffold_242-1510915933:129927..132222 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1575043694:129927..132222 | TCONS_00054185-exon-scaffold_242-1575043694:129927..132222 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1491911889:132419..132911 | TCONS_00054185-exon-scaffold_242-1491911889:132419..132911 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1510915933:132419..132911 | TCONS_00054185-exon-scaffold_242-1510915933:132419..132911 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1575043694:132419..132911 | TCONS_00054185-exon-scaffold_242-1575043694:132419..132911 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1491911889:133307..133984 | TCONS_00054185-exon-scaffold_242-1491911889:133307..133984 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1510915933:133307..133984 | TCONS_00054185-exon-scaffold_242-1510915933:133307..133984 | Clytia hemisphaerica | exon |
| TCONS_00054185-exon-scaffold_242-1575043694:133307..133984 | TCONS_00054185-exon-scaffold_242-1575043694:133307..133984 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_242 | supercontig | scaffold_242:123517..133984 + |
Blast
BLAST of TCONS_00054185 vs. Swiss-Prot (Human)
Match: GNPTA (N-acetylglucosamine-1-phosphotransferase subunits alpha/beta OS=Homo sapiens GN=GNPTAB PE=1 SV=1) HSP 1 Score: 467.233 bits (1201), Expect = 6.340e-143 Identity = 277/768 (36.07%), Postives = 407/768 (52.99%), Query Frame = 3
Query: 117 ILCKLIQKRTYSCLSTPSGIWFAFFGLCIIVVSAFHFGEVFLQWSMMRYAGNFHISRYYDNIAGKSFEPRLCLPQPIDIVYTWVNGSDPKLIQNLNKIKNELEAELNRTSFNTFQEKKKRGKLINDNAFKWKDKHKCPLPNCVPSNRIAVS-GLNRGVTLYQVKAINSYF---GDVQNLEFWDEDSD----VVFISFKDYDNIGKIMNTTCLFKKLPLNISEVFYTSTVK--LGHKKLDDVVMVHEYDSN--SESEIKSIVSLKVKDSVNYVKSYPDQKVTIVSMSTKDGFKQLRTIPKKDLKLNGKSFKFFPVTYVWKPVALRIDNSNQDMSSNRFADNDELKYSLRSVEKFVPWIRKIFIVTNGQIPSWLDLHHPRIQLVTHDDIFVNKTHLPTFSSPAIEAHIHRIPGLSKKFIYMNDDVFFGAPVWPDDFFTHSKGHKIYLSWAVPNCNEGCPASWINDKYCDKACNVTACDYDGGDCIGKNAKKGSWNL----------HQQEAQRFSNSRLSEYCFKGCALNWVGDRYCDGNCNHAECAFDGGDCGVSNYHMLFSQTFKKDIFKGVGSVIQPPDGTLAMFVNFTNIFDSVIEGTFTDAPVLRNAILSKKFKVMSMTFFKNMTENVIDFQILGYRGANQTDKSVAMFKINITTLAQQTAHPDKLKDNATKE----IIPTALYPN------------HLKNLKPALLN-TNLEDNHYPESFVNIT-LPEDLSLQRAEIRHDFSTGDITELGYNRSLALLYQEYL 2300
+L KL+Q++TY+CLS G++ F G+ + +VSAF FGEV L+WS +Y F Y DNIAGKSF+ RLCLP PID+VYTWVNG+D +L++ L +++ ++E E ++ GK + K + + +C L +C+ + + L +TL + ++ F D+ N+ S VVF S KD ++ + L K Y +T K G + D+ + + +++K+ + + V ++ Y + V ++ ++ F++L KK++ ++GK P +W A+ ++D+S++RF DN+EL+YSLRS+E+ PW+R IFIVTNGQIPSWL+L +PR+ +VTH D+F N +HLPTFSSPAIE+HIHRI GLS+KFIY+NDDV FG VWPDDF++HSKG K+YL+W VPNC EGCP SWI D YCDKACN +ACD+DGGDC G + GS + Q Q YC +GCA +W+ D++CD CN C FD GDCG ++H L+ K I + P G + +F + +EG ++D P++R+A ++ K+K + + M I F L ++ N + FK+ IT P KL A K + P L P K +N T VNI+ LP+D L + GDIT GYN S + L + +L
Sbjct: 1 MLFKLLQRQTYTCLSHRYGLYVCFLGVVVTIVSAFQFGEVVLEWSRDQYHVLF--DSYRDNIAGKSFQNRLCLPMPIDVVYTWVNGTDLELLKELQQVREQMEEEQKAM-------REILGKNTTEPTKKSEKQLECLLTHCIKVPMLVLDPALPANITLKDLPSLYPSFHSASDIFNVAKPKNPSTNVSVVVFDSTKDVEDAH-----SGLLKGNSRQTVWRGYLTTDKEVPGLVLMQDLAFLSGFPPTFKETNQLKTKLPENLSSKVKLLQLYSEASVALLKLNNPKDFQELNKQTKKNMTIDGKELTISPAYLLWDLSAISQSKQDEDISASRFEDNEELRYSLRSIERHAPWVRNIFIVTNGQIPSWLNLDNPRVTIVTHQDVFRNLSHLPTFSSPAIESHIHRIEGLSQKFIYLNDDVMFGKDVWPDDFYSHSKGQKVYLTWPVPNCAEGCPGSWIKDGYCDKACNNSACDWDGGDCSGNSG--GSRYIAGGGGTGSIGVGQPWQFGGGINSVSYCNQGCANSWLADKFCDQACNVLSCGFDAGDCGQDHFHELY-----KVILLPNQTHYIIPKGECLPYFSFAEVAKRGVEGAYSDNPIIRHASIANKWKTIHLIMHSGMNATTIHFN-LTFQNTNDEE-----FKMQITVEVDTREGP-KLNSTAQKGYENLVSPITLLPEAEILFEDIPKEKRFPKFKRHDVNSTRRAQEEVKIPLVNISLLPKDAQLSLNTLDLQLEHGDITLKGYNLSKSALLRSFL 740 HSP 2 Score: 301.212 bits (770), Expect = 1.143e-84 Identity = 150/322 (46.58%), Postives = 217/322 (67.39%), Query Frame = 3
Query: 2403 DCVLSFLPWERGKAGKDSLSKIKKMLTLQNYQQLELGTRRRLFDAYSSSLLHVSRIYNKAFGYKARKVPAHMPHMVDRDIIYEMQTKFWSFFDATSSHKLRHPQDMQFAFSFNYFVIGVKKSKNLFQLFDEIDTDHSGTLNDRELRTLTAVLYPLPISIKQIHAVEENLKNCSRRLINSYNYILNDTSTLPSTSQPTEHFDDQLPLVTKDLFINCHEVWKLVNKT--DDSKYQHEIMGEDDLAFKMIHNNVTTVLHQLDWVRKNRKKFICINDDLDHDRADSKTIRRVLRDFYESFFPIPSQFELEGKYKNRFLYKRDLEEW 3362
D L FLPWE+ K +D L + + + T Y T R+L D ++ SL +V++I N FG+ +RKVPAHMPHM+DR ++ E+Q F FD TS HK+RH +DMQFAFS+ Y+++ + N+ Q+FDE+DTD SG L+DRE+RTL ++ LP+S++ + +E L NCS+ L + N +P T + ++D LP VTK L NC V ++K D +KY+ EIMGE+++AFKMI NV+ V+ QLD +RKN +KF+C+ND++DH+ D++T++ VLRDFYES FPIPSQFEL +Y+NRFL+ +L+EW
Sbjct: 886 DSYLGFLPWEKKKYFQDLLDEEESLKTQLAYFTDSKNTGRQLKDTFADSLRYVNKILNSKFGFTSRKVPAHMPHMIDRIVMQELQDMFPEEFDKTSFHKVRHSEDMQFAFSYFYYLMSAVQPLNISQVFDEVDTDQSGVLSDREIRTLATRIHELPLSLQDLTGLEHMLINCSKMLPADITQLNN----IPPTQE--SYYDPNLPPVTKSLVTNCKPVTDKIHKAYKDKNKYRFEIMGEEEIAFKMIRTNVSHVVGQLDDIRKNPRKFVCLNDNIDHNHKDAQTVKAVLRDFYESMFPIPSQFELPREYRNRFLHMHELQEW 1201
The following BLAST results are available for this feature:
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