TCONS_00054173 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054173
Unique NameTCONS_00054173
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2578

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054173 ID=TCONS_00054173|Name=TCONS_00054173|organism=Clytia hemisphaerica|type=transcript|length=2578bp
CTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTT
TCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTTG
CTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaat
tcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCAG
AGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGAC
TCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGG
AAAAGTCAATGGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAG
AAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGA
GTAGCAAATGGAAAAGCTAATGGGAAGAAAGCCCCATCTAAGAAAGTAGC
AGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAG
AAAAACCCAAAGCTAAAGCAAAAGCTCCAGCCAAGAAAGCACCAGCTAAG
AAAGAATCAAGCTCGGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACC
AAAAGCTAAAGCAAAAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAAT
CAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAA
GCAAAAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAG
TTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGCACCAAAACGAAAGA
AGGATTCCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAA
CaaaaagaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGA
TGTCAATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTG
GTTTATCATACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGAT
AACGAAATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGG
AAAATCAAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAG
ATAAATGTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGC
TTTGATGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGG
ACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTC
GTGGCGGCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTA
TTACTTGTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAG
TAAATTTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAA
ATTCTAGAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAA
GCAGCTCACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAAC
AATCGTTTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTG
GAGGACGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGT
GGACGTGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGG
AGGTCGTGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCG
AAGGCTCCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAG
AATGATAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGA
TCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACAC
TTGATGAAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTA
ATTAGCTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGT
ACTTATTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATT
CCTTGCTGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCC
GTTacgaagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCAT
TAAATTTGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTA
CATTAAGACTCATTGAtcacatttttatttcatcctATGTGCGTATTAAT
ACCTTCAAACGGGCTATAATAAATAACAAtacattatttttttgtatttt
tttcatggTTTTCAATTGGCTTGGAAacttttataaacaaaacttttacA
GGACATAATACTTTAttatacatttttaatttttgtcattttttggtaaa
aaagacATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGA
ACACTCCACTCCCTTCAAAATGCagtacatgtttttataagcatatctta
GGCTCAGATATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTac
ttaaaagaaatactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaa
gctttaaaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69492..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054173 ID=TCONS_00054173|Name=TCONS_00054173|organism=Clytia hemisphaerica|type=transcript|length=11319bp|location=Sequence derived from alignment at scaffold_242:69492..80810+ (Clytia hemisphaerica)
CTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCGCTAGCGTGATTTT TCATCCATGTGCTAAACCAAGTTCTTTTACAAATATTGCTGAACGGCTTG CTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAAATTGCTcttaaat tcaagaaaatacaaaaatggtCAAAGCAAAGACAAAAACAATAAAGGCAG AGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGAAACTGACTCTGAC TCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGG AAAAGTCAATGGTATGTTTTTTACATTAGATTAgacatttgatattttat gcCTAACATCAGAGTAACTGGGATAGGAAAAATACAGTGGGTCTCAGGGA AGTTTAGGAAAAAGTAGCTGTAACAAAAATGACTATGCTATCAACTTTGT TGGAATTTCACAATTTGTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGAT ACCTGGTGTAGGCGAATAGGTAGATAAGGGGCATTTGACTGCCTGGATGC AACTGGAAAGATCCAGGCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCA TCTGCCTTTAAAAAACAGAGGCGCACTGATATGTCTCTAAACAAGTCCAG GTCCCATGAGTCCAATCCAAGActgtttgaaatttattttaaatttcctA TTTGGAGTTACCAAAATTCTTTATGAAAATCATTTAACACAAAActtgat caaatttaaaatgtaaaagCAGCAAATATATATACAGAATAGAACAGAAA AATGAAGTGACTGCTTTTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAg gcaaaaaatctttgaaaattgcagataaaatctttaaaaaaacacTTGAT GATCAAGAGGCTGGCTACGTTGAATCTACAAAATTATTTGGATAGTATTG CCAAAAAATCTGACAAATATTACGACTAGAAAAGGGTCAGATTTTTAAGA TAGAGCGTGAGCGAGTTGGAGGACTTGAACCAACTTATTTGTGACCCAGG CCTAGCTCAACAAAACCATGTCCCAATCAAAGATAAAGAAGAGGAATGTG GAATTATTTCTGCATTTCGATCAGCTATCGAAACATAGAACTATTTCTTT AATGTGGTTTAAATTGTTTTTagtatttacattttttgtgaaatttctag CTTCCATTTGAAAAAGGATATCATTTTTTTTTGAGTCACAAAAGATACGG AAATTACTACATAGCAGTCAGCTGTAAATAATTGGAAATAAAgttaatta aattttcaaaatgatttagGTACAACCAAAAAGCCTGTCAAAAAAGAAAG TTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGA AAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTC AGTTACAGTACACATTgctatatcaattttttttaaatatatcatTTAGT AAGATTTTGCTGAGGCTTGgcttttcttatatttttggcCCTTTAAGCCT CAAATTTTTCTTATCCTGTTCTCATggggtgtaattgaggtataTCAAgc attatacccaatttttactactttgaccccaaaattagtatttttctTAA ATATTCTAATGCTtcggcgattttgagcctcaaagtgtataccttattac acaaatattactagtATTTTATTAACACAAATTGAAAAGTTTCATGTTAA TAAAAACCAGCCGTGATGTCCTTGaagaagcaaataaaatttgtgttaat tttttgcgtgttaatttcaaggtcATTGAATACTTTCCTCGTAATATTTG TGCAATAAGGTAATTAtattattttctggtttacagacattatgaggaaa agttttggacaggaggatggaaaaaaaaataaaaataaaattaatgtttt aaatttttttttagtttctttttaaaaatctgaattcaaaggaaataata aaataaaattttacgaaatttccTAAAGTatcaaatttttagatttaaag acaaaagaatAAAGTGCAAGATGTTGTGTAGATTAGTTTTAGATACGCAT CTACggataaaaacataaaaaatgtacACATAAAGACTGATATGTGTTTA TGTAAGACTGAcgtaggttcccacttaggttcccccatcccacttctGGT ATGCCTATTTTTCTATCTACTCTTGAATTTTAACAATCACATAAAGGACC CTGAATAAAAGCaattacaataaaaaatcaactgcGTAACACAAGAGTTG tataatttagtttttttttatttacttgcCTAAACCTGGAAAGTAAgaca gaaaaaattaaattaaaaattaaaaaaattaaaaattgatagATATCTCA TATAATACTCAGTACTGGGCAATACCTAGTTAATTTAACATATGGGGTAT ATTTTGgggcaaaaatttaatttttgacaaTCTAATTTCACTTATTGGAT TTTGAGGAAAGTTAGCTAAAATGTTTGTTTTAACCTACAGCACCAGCAAA GAAAGAATCAAGCTCAGAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAA AAGCTAAAGCTGGTAAAAAGTTTAAagcctttaaattgagaaaatgcaGA TTACACACACAGATCTAGGGGGTTTAAAAGATCTTTGTGAAactaaaaaa tttttgggggattttttttcattcaacaaccaaatttagaaaattagtAT TAATAACATTATTTTGGAATAACAGACATGAAGACAATCCCATCTTAGTC TTCTCAGGACAAATACAGCATTTTCTAGAGCACAATGTTGGTTTTACTAC ACaaataatcatatttttcttctttttttgtcaaACTGATACTTTACCTT TACTGCGTTTTTGCATAATCAAAGATAGAAGtgcttttttgagagaaaaa aacagttttgaaaactaattttagGTTTTAGTACTGCCACTTGTAGACCT Taagtagtaagtctgcgaccgcagtcggaggcgacccgaaggctcctctt tcgatagctgtctacccgaaggtaggggagggcgccactctttctcNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttttttcacctttcaa agtctctctaagggtcggaaaaatcagaaagttttaaattagtctctcta agggtcggaaaattcaggaattttatgaaattttttgatttccagagaaa aagttgtaataaagtctctctaagggtatgacttttttcaaaaatcgaaa aaaaacattcaaagagtctctctaagggtcaccttttcagcaaaaatcag tctctttaagggttgGTTTTCAGAGGTCCCATTCgtacatacccctcatt cgccaaccctagtaccccccggatgaacgttatgtacagaaaaattttat caCAACTAAAAAAGTTCTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNTTGGTATCTGGatcctgaccccccccctgaccAAAAA GGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTAAATATATA AAGAAAGCAGTCATAAATAGTAAAAAATTTATAAGTGATAACAAAACAGG CCATGTCTTAGAAAGGTAGCGTCCATTGGTGACCAAAAAGGGTACTTTTT GTAGTGTTTTACCACCAAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATCA GTTAATAAGTGGGCGCTAAAAAAGGGCATTAAAAATGGTCAGACAACAGA ACACATAATTGTTCTGGGTTTCGTCGCTCAAATTGAATTGATAAAGAGGG CGAAATGTTATCAAGATATTCTATGTTTCTTTTAAGTGCATTCTAGACTA CTCTTACTTTTGCGGGCAGTGCAAAATGTTGTGTGGATATTTCTCAATGG TGTGTGATATGCTTGTTTACCAGATTTGTCTTATCTAACAACTTTTTTGA TTCAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAG AAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGGT ACAAATTAATGCAGTGATCTCCTTTAatgtttgaaaatctctttcaTATC ATGTGATGCtgcaaaattttgaagattaatTTTCACATCTAGATTGGGTT ATATAACAAGAAAACATGAGTTAATACCTGCCTTATGGATCATATGGAAC AGTGTTGTTGGGCCTCCTAAAGTTTCCTGAATTGTCCTAAATTTTGAAGC CATCTAAAATCTCCTTTGAAGGTGAAATTTTGAACATACAAGTTTCAGAA ATTTGATTGTGTTTAAACAGTAATAAATGCAAGCAAAtctctttgattct ttttagCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAA GAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGG TATGATTATGTTGTTTTGGTAAGAAACTAACTTTGACCTCTATTTCATAT AATTGATCCTGGTACATCACAAATGACTCTTTTGCTTAAGTTTCTGTCAC AACAAACTTTGGATTTAGACACTTAAAGTTTTGACACTCACATGACTGAT TAATATTAAagtttccattttcattttaatcCATTAACATCTCTTTCAGC TGAAAGCCGAAAGTCTGAGATAGCcttgtccaaattttcgtaatCTTACT AAAACATTGCATTTTTTAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGA ATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTA AAGCAAAAGGTATAATGATCTTATTTCATATATAGGTAGTGGTTACTTTT TAAAGGATAGGTTCTACAGTTCAATATTCTTAGTACGCAGCTGTGTATTG CTTCAACATCTGATTGTACAGATTTTTctccaaatttaaatttctacAAT TTTGAAATGAAGTTAAAGAAATTTGTTCCCTTGATGTTTTGAAGGTCTAT CTGAAATAAAAAGCTTTGCTTTGAGCATTGCAATTTTCAAATCTTGGTTC AATTTTTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGC TCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAACC TGGTAAATAGTTTGAAACATGCCAAAGATTTATGAAACTCTAccatttaa agggataatcagatgggttgagatttttttgtttttactaaaagtcaaaa acttctTGTAACATAATTACCTTTGCTTTAGAAATACTtaattaaaaaga ttttgagGTTTGCTTAGGAAAATAGAAGGATTCCGCATACCAAATATCCC AAACCCATAGTGTGCAGTGgggtctgacccccccccccccccttttNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccc ccccccccatttataTTTCATTCCCCCTATATTTGCATTGGTTGGCAAAc aatatcatactccaggatgcaagtcTCAAATTTTCAATCCGTTGGTGGCT AAATAGGGCATTTTTTCCTAAGTTgttccactaaaaaggctgtttttacc aatattttagtaatttcaggaGGGGAAGCGGCTGATAACCAGACGCTTAA AGGGCATAAAAAATGGCCTGATAGAAAATAAGGGGAAATAAGAGAGAGCA GACCACTTTTCATACCATTCAAGCATCTTGTAATATGATGCTGTCCCTAT GAGAACGTTAAAATTATTGTGAAAACATCCCTTTTAAGTTTTacaggaaa aaatgtttcaaattgtCATTTAAGCTTAAAATATGGAATTTTGGCTTTAG TGAGCATGCATTTGGTGAACctaattttgcagaatttaatttcgcggttt tagacAAACACACAAATATTCTCATGAATAAAGAATAACctataaaattg gtctttttaggcaATAAAGgacatattttaaacaaaacatCCTCTCAACC GCAAAATTATATTCTGCAAAACTtccgaattttgagctgtgaaccaCTAA ATGAAATCCCGTGAAAATATCTTCCCTCAAGTTCATATCAAATGCTTATT CTTTTTTAATTCAGCCCCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAA GCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAAACCTAAAGCTAAA GCAAAAGGTACAAACCGAGGAAGTCctgttttgtaatattttgataaaga aaCCAAAGTTTTCTTGTTGTCACTTTTGTGACTTCTGAATTGTAGGTTTA GTTTCAGCTGATTTTATATTATGATTTAATATTTAGCTCCTGCCAAAAAG AAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAA ACCTGCGAAAAAAGGTAATTTCATTAATATCCttggtctttattttatta ttagtgaggttaagtaaatcagtaaaatcacgacgacgaacgaaaattta aaatttctttcaaccaatcaaaagtAATTAGCTGATTTATTTTAGCCCCA CGTTAAGTGATAGCTCCcaagtacataggtccccccaaaaaagtggtgtT CTTCCAGGCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggctgac gctatgaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGG TGTTCTTCCAGCCCCCTCCGTTGGGAAAAATTTCACAACCAGcagggggc tgacgctatgaaGTGTTTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAAC ATCATGCTTTGTCATTATAAGCATGCTGTCTTAATTTATGGTGTGCTGTT TAAGTGGAGGCATGCGTGTCACATCAAATGATTCAACatgagaaaaaaaa cgaaattctATCTTTTTTAAGCACCAAAACGAAAGAAGGATTCCTCATCT GAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAACGTACGTAATATGT CTTTAACTTAAGtgttttttcagatttggtTCATTTTCACCGGCTCATTT TCATGTTGAGTGACCAAGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGT ATTCTGCAATGCTTGGGTCATATCACCAGAATGTAATATTTCTAAAACTT GCCAACGATTTTAAGAACTTTTACGACCTTTTATTATcatagaaaaagaa gaaaagaaaaatttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATAC ACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCAT ACTACACAACTGAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATT AATCTTACTAATTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAG AGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTT ATAAAATTGAGGACACTACTTTAGACGAACGTCAATTACGCTTTGATGCC TCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGA CCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCC GCGGAGGATTCAACCGAGATAACGAAACCCCAACAAAATTATTACTTGTG AAAAATCTCTCATATGACACTTATAATGAATCTTTGATGAGTAAATTTAG TGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAG GTTTCGCTTTTGTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCAC AAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTA TGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAG GTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGT GGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGG TGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCA AACTGACATTCGATAATGATTCAGATTAAAGAAACAGACAGAATGATAAG AGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTA ACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAA CTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTG CTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTG GTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGT CTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaag ttttgaaaaaacaaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGT GTGCTTACCATATATTGACATTGAAAGTCAACAATTCTTTACATTAAGAC TCATTGAtcacatttttatttcatcctATGTGCGTATTAATACCTTCAAA CGGGCTATAATAAATAACAAtacattatttttttgtatttttttcatggT TTTCAATTGGCTTGGAAacttttataaacaaaacttttacAGGACATAAT ACTTTAttatacatttttaatttttgtcattttttggtaaaaaagacATC GGATATACGGACAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCAC TCCCTTCAAAATGCagtacatgtttttataagcatatcttaGGCTCAGAT ATTgggaaaattaagcatatgtcTTGAGGAAATTGATCTacttaaaagaa atactttgtTGGAAGGATAATTTTAAGTAAATGATttcaaagctttaaaa aaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054173-exon-scaffold_242-1491911889:69492..69802TCONS_00054173-exon-scaffold_242-1491911889:69492..69802Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:69492..69802TCONS_00054173-exon-scaffold_242-1510915933:69492..69802Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:69492..69802TCONS_00054173-exon-scaffold_242-1575043694:69492..69802Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:70811..70930TCONS_00054173-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:70811..70930TCONS_00054173-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:70811..70930TCONS_00054173-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:75797..75889TCONS_00054173-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:75797..75889TCONS_00054173-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:75797..75889TCONS_00054173-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:76198..76290TCONS_00054173-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:76198..76290TCONS_00054173-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:76198..76290TCONS_00054173-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:76561..76650TCONS_00054173-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:76561..76650TCONS_00054173-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:76561..76650TCONS_00054173-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:78228..78305TCONS_00054173-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:78228..78305TCONS_00054173-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:78228..78305TCONS_00054173-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:78813..78878TCONS_00054173-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:78813..78878TCONS_00054173-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:78813..78878TCONS_00054173-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1491911889:79084..80810TCONS_00054173-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1510915933:79084..80810TCONS_00054173-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054173-exon-scaffold_242-1575043694:79084..80810TCONS_00054173-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69492..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.16911e-06 4.72668e-07 9.60262e-08 1.39912e-06 4.66311e-07 8.69303e-08 1.29748e-06 1.60807e-07 5.28062e-08 2.95674e-05 2.63519e-05 6.59973e-06 1.86415e-05 4.3381e-07 7.64362e-08 1.3461e-07 1.8223e-07 4.53805e-08 2.80234e-07 2.4938e-08 3.01131e-07 2.04141e-06 1.86174e-07 1.00339e-07 9.23984e-07 6.22407e-08 1.09306e-07 1.20225e-05 2.31119e-07 2.60835e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054173 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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