TCONS_00054172 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054172
Unique NameTCONS_00054172
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2408

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054172 ID=TCONS_00054172|Name=TCONS_00054172|organism=Clytia hemisphaerica|type=transcript|length=2408bp
ATTTTAGTACAGCCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCG
CTAGCGTGATTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATT
GCTGAACGGCTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAA
ATTGCTcttaaattcaagaaaatacaaaaatggtCAAAGCAAAGACAAAA
ACAATAAAGGCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGA
AACTGACTCTGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCAC
CAAAGAAGAATGGAAAAGTCAATGGTACAACCAAAAAGCCTGTCAAAAAA
GAAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCCAAACCAGC
AAAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAAAGCCCCAT
CTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGT
GATGAAGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGCTCCTGCCAAAAA
GAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGA
AACCTGCGAAAAAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGAT
GAAAGTGAAGAAGAGGAACAGCCCAAAAAACaaaaagaagaaaagaaaaa
tttgaaacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAG
TAAAGGAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACT
GAAGATGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAA
TTGCCGTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGAT
ACGCTGATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAG
GACACTACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGG
AGCTAAAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTG
GTGGTTTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTC
AACCGAGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTC
ATATGACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATG
ATGCTCGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTT
GTTGAATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTC
CGGTAAAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAA
GAGAAGATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTC
GGCAGCGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGG
CGGTCGAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACAC
CATCAAACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTC
GATAATGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTC
GTTATTAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGG
CTGGCCCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGG
AACTCCTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAAT
GATGAACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTC
TATTTGAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATAT
ATAACTTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaa
caaaatctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCAT
ATATTGACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcac
atttttatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAAT
AAATAACAAtacattatttttttgtatttttttcatggTTTTCAATTGGC
TTGGAAacttttataaacaaaacttttacAGGACATAATACTTTAttata
catttttaatttttgtcattttttggtaaaaaagacATCGGATATACGGA
CAGTGGTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAA
TGCagtacatgtttttataagcatatcttaGGCTCAGATATTgggaaaat
taagcatatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTG
GAAGGATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgata
TAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69479..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054172 ID=TCONS_00054172|Name=TCONS_00054172|organism=Clytia hemisphaerica|type=transcript|length=11332bp|location=Sequence derived from alignment at scaffold_242:69479..80810+ (Clytia hemisphaerica)
ATTTTAGTACAGCCTCGTTTACAATATCAAAATTTACGCTTGGGTGTCCG
CTAGCGTGATTTTTCATCCATGTGCTAAACCAAGTTCTTTTACAAATATT
GCTGAACGGCTTGCTGTTGGAGGGAATCTTTGGTGTGTAATTTGCTCTAA
ATTGCTcttaaattcaagaaaatacaaaaatggtCAAAGCAAAGACAAAA
ACAATAAAGGCAGAGGAAATTCCAAAATCCAAGAAAGCTAAAAAAGTTGA
AACTGACTCTGACTCGTCATCTGAAGAAGAGGAAGAAGTCAAAGTCGCAC
CAAAGAAGAATGGAAAAGTCAATGGTATGTTTTTTACATTAGATTAgaca
tttgatattttatgcCTAACATCAGAGTAACTGGGATAGGAAAAATACAG
TGGGTCTCAGGGAAGTTTAGGAAAAAGTAGCTGTAACAAAAATGACTATG
CTATCAACTTTGTTGGAATTTCACAATTTGTAAGCTTGTAAGGCTTGTAA
GACCCTCAAGGATACCTGGTGTAGGCGAATAGGTAGATAAGGGGCATTTG
ACTGCCTGGATGCAACTGGAAAGATCCAGGCGTTCTGTGGGATCCTAGGA
TTGTGGGGAAGCATCTGCCTTTAAAAAACAGAGGCGCACTGATATGTCTC
TAAACAAGTCCAGGTCCCATGAGTCCAATCCAAGActgtttgaaatttat
tttaaatttcctATTTGGAGTTACCAAAATTCTTTATGAAAATCATTTAA
CACAAAActtgatcaaatttaaaatgtaaaagCAGCAAATATATATACAG
AATAGAACAGAAAAATGAAGTGACTGCTTTTGTAGAAGCGGTTGTTGTGT
AGCGCTTTGTAAggcaaaaaatctttgaaaattgcagataaaatctttaa
aaaaacacTTGATGATCAAGAGGCTGGCTACGTTGAATCTACAAAATTAT
TTGGATAGTATTGCCAAAAAATCTGACAAATATTACGACTAGAAAAGGGT
CAGATTTTTAAGATAGAGCGTGAGCGAGTTGGAGGACTTGAACCAACTTA
TTTGTGACCCAGGCCTAGCTCAACAAAACCATGTCCCAATCAAAGATAAA
GAAGAGGAATGTGGAATTATTTCTGCATTTCGATCAGCTATCGAAACATA
GAACTATTTCTTTAATGTGGTTTAAATTGTTTTTagtatttacatttttt
gtgaaatttctagCTTCCATTTGAAAAAGGATATCATTTTTTTTTGAGTC
ACAAAAGATACGGAAATTACTACATAGCAGTCAGCTGTAAATAATTGGAA
ATAAAgttaattaaattttcaaaatgatttagGTACAACCAAAAAGCCTG
TCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAGTGAAGAAGAAGCC
AAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAGCTAATGGGAAGAA
AGGTAAAATTTTCAGTTACAGTACACATTgctatatcaattttttttaaa
tatatcatTTAGTAAGATTTTGCTGAGGCTTGgcttttcttatatttttg
gcCCTTTAAGCCTCAAATTTTTCTTATCCTGTTCTCATggggtgtaattg
aggtataTCAAgcattatacccaatttttactactttgaccccaaaatta
gtatttttctTAAATATTCTAATGCTtcggcgattttgagcctcaaagtg
tataccttattacacaaatattactagtATTTTATTAACACAAATTGAAA
AGTTTCATGTTAATAAAAACCAGCCGTGATGTCCTTGaagaagcaaataa
aatttgtgttaattttttgcgtgttaatttcaaggtcATTGAATACTTTC
CTCGTAATATTTGTGCAATAAGGTAATTAtattattttctggtttacaga
cattatgaggaaaagttttggacaggaggatggaaaaaaaaataaaaata
aaattaatgttttaaatttttttttagtttctttttaaaaatctgaattc
aaaggaaataataaaataaaattttacgaaatttccTAAAGTatcaaatt
tttagatttaaagacaaaagaatAAAGTGCAAGATGTTGTGTAGATTAGT
TTTAGATACGCATCTACggataaaaacataaaaaatgtacACATAAAGAC
TGATATGTGTTTATGTAAGACTGAcgtaggttcccacttaggttccccca
tcccacttctGGTATGCCTATTTTTCTATCTACTCTTGAATTTTAACAAT
CACATAAAGGACCCTGAATAAAAGCaattacaataaaaaatcaactgcGT
AACACAAGAGTTGtataatttagtttttttttatttacttgcCTAAACCT
GGAAAGTAAgacagaaaaaattaaattaaaaattaaaaaaattaaaaatt
gatagATATCTCATATAATACTCAGTACTGGGCAATACCTAGTTAATTTA
ACATATGGGGTATATTTTGgggcaaaaatttaatttttgacaaTCTAATT
TCACTTATTGGATTTTGAGGAAAGTTAGCTAAAATGTTTGTTTTAACCTA
CAGCACCAGCAAAGAAAGAATCAAGCTCAGAAGAAAGCAGTGATGAAGAG
GAAGAAAAACCAAAAGCTAAAGCTGGTAAAAAGTTTAAagcctttaaatt
gagaaaatgcaGATTACACACACAGATCTAGGGGGTTTAAAAGATCTTTG
TGAAactaaaaaatttttgggggattttttttcattcaacaaccaaattt
agaaaattagtATTAATAACATTATTTTGGAATAACAGACATGAAGACAA
TCCCATCTTAGTCTTCTCAGGACAAATACAGCATTTTCTAGAGCACAATG
TTGGTTTTACTACACaaataatcatatttttcttctttttttgtcaaACT
GATACTTTACCTTTACTGCGTTTTTGCATAATCAAAGATAGAAGtgcttt
tttgagagaaaaaaacagttttgaaaactaattttagGTTTTAGTACTGC
CACTTGTAGACCTTaagtagtaagtctgcgaccgcagtcggaggcgaccc
gaaggctcctctttcgatagctgtctacccgaaggtaggggagggcgcca
ctctttctcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNggttt
tttcacctttcaaagtctctctaagggtcggaaaaatcagaaagttttaa
attagtctctctaagggtcggaaaattcaggaattttatgaaattttttg
atttccagagaaaaagttgtaataaagtctctctaagggtatgacttttt
tcaaaaatcgaaaaaaaacattcaaagagtctctctaagggtcacctttt
cagcaaaaatcagtctctttaagggttgGTTTTCAGAGGTCCCATTCgta
catacccctcattcgccaaccctagtaccccccggatgaacgttatgtac
agaaaaattttatcaCAACTAAAAAAGTTCTAAGATCTGCTAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTTGGTATCTGGatcctgacccccc
ccctgaccAAAAAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTG
TGTTAAATATATAAAGAAAGCAGTCATAAATAGTAAAAAATTTATAAGTG
ATAACAAAACAGGCCATGTCTTAGAAAGGTAGCGTCCATTGGTGACCAAA
AAGGGTACTTTTTGTAGTGTTTTACCACCAAAAAGGCTGTGTTTAGTGAA
AGGGGCAGGATCAGTTAATAAGTGGGCGCTAAAAAAGGGCATTAAAAATG
GTCAGACAACAGAACACATAATTGTTCTGGGTTTCGTCGCTCAAATTGAA
TTGATAAAGAGGGCGAAATGTTATCAAGATATTCTATGTTTCTTTTAAGT
GCATTCTAGACTACTCTTACTTTTGCGGGCAGTGCAAAATGTTGTGTGGA
TATTTCTCAATGGTGTGTGATATGCTTGTTTACCAGATTTGTCTTATCTA
ACAACTTTTTTGATTCAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAA
TCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGC
TAAAGCAAAAGGTACAAATTAATGCAGTGATCTCCTTTAatgtttgaaaa
tctctttcaTATCATGTGATGCtgcaaaattttgaagattaatTTTCACA
TCTAGATTGGGTTATATAACAAGAAAACATGAGTTAATACCTGCCTTATG
GATCATATGGAACAGTGTTGTTGGGCCTCCTAAAGTTTCCTGAATTGTCC
TAAATTTTGAAGCCATCTAAAATCTCCTTTGAAGGTGAAATTTTGAACAT
ACAAGTTTCAGAAATTTGATTGTGTTTAAACAGTAATAAATGCAAGCAAA
tctctttgattctttttagCTCCAGCCAAGAAAGCACCAGCTAAGAAAGA
ATCAAGCTCGGAAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAG
CTAAAGCAAAAGGTATGATTATGTTGTTTTGGTAAGAAACTAACTTTGAC
CTCTATTTCATATAATTGATCCTGGTACATCACAAATGACTCTTTTGCTT
AAGTTTCTGTCACAACAAACTTTGGATTTAGACACTTAAAGTTTTGACAC
TCACATGACTGATTAATATTAAagtttccattttcattttaatcCATTAA
CATCTCTTTCAGCTGAAAGCCGAAAGTCTGAGATAGCcttgtccaaattt
tcgtaatCTTACTAAAACATTGCATTTTTTAGCCCCGGCCAAGAAAGCAC
CAGCTAAGAAAGAATCAAGCTCAGAAGACAGTAGTGATGAAGAGGAAGAA
AAACCAAAAGCTAAAGCAAAAGGTATAATGATCTTATTTCATATATAGGT
AGTGGTTACTTTTTAAAGGATAGGTTCTACAGTTCAATATTCTTAGTACG
CAGCTGTGTATTGCTTCAACATCTGATTGTACAGATTTTTctccaaattt
aaatttctacAATTTTGAAATGAAGTTAAAGAAATTTGTTCCCTTGATGT
TTTGAAGGTCTATCTGAAATAAAAAGCTTTGCTTTGAGCATTGCAATTTT
CAAATCTTGGTTCAATTTTTTTAAGCTCCAGCTAAGAAAGTAGCAGCAAA
GAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAAC
CAAAAGCTAAACCTGGTAAATAGTTTGAAACATGCCAAAGATTTATGAAA
CTCTAccatttaaagggataatcagatgggttgagatttttttgttttta
ctaaaagtcaaaaacttctTGTAACATAATTACCTTTGCTTTAGAAATAC
TtaattaaaaagattttgagGTTTGCTTAGGAAAATAGAAGGATTCCGCA
TACCAAATATCCCAAACCCATAGTGTGCAGTGgggtctgacccccccccc
cccccttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNccccccccccccatttataTTTCATTCCCCCTATATTTGCA
TTGGTTGGCAAAcaatatcatactccaggatgcaagtcTCAAATTTTCAA
TCCGTTGGTGGCTAAATAGGGCATTTTTTCCTAAGTTgttccactaaaaa
ggctgtttttaccaatattttagtaatttcaggaGGGGAAGCGGCTGATA
ACCAGACGCTTAAAGGGCATAAAAAATGGCCTGATAGAAAATAAGGGGAA
ATAAGAGAGAGCAGACCACTTTTCATACCATTCAAGCATCTTGTAATATG
ATGCTGTCCCTATGAGAACGTTAAAATTATTGTGAAAACATCCCTTTTAA
GTTTTacaggaaaaaatgtttcaaattgtCATTTAAGCTTAAAATATGGA
ATTTTGGCTTTAGTGAGCATGCATTTGGTGAACctaattttgcagaattt
aatttcgcggttttagacAAACACACAAATATTCTCATGAATAAAGAATA
ACctataaaattggtctttttaggcaATAAAGgacatattttaaacaaaa
catCCTCTCAACCGCAAAATTATATTCTGCAAAACTtccgaattttgagc
tgtgaaccaCTAAATGAAATCCCGTGAAAATATCTTCCCTCAAGTTCATA
TCAAATGCTTATTCTTTTTTAATTCAGCCCCAGCTAAGAAAGTAGCAGCA
AAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGAAGAGGAAGAAAA
ACCTAAAGCTAAAGCAAAAGGTACAAACCGAGGAAGTCctgttttgtaat
attttgataaagaaaCCAAAGTTTTCTTGTTGTCACTTTTGTGACTTCTG
AATTGTAGGTTTAGTTTCAGCTGATTTTATATTATGATTTAATATTTAGC
TCCTGCCAAAAAGAAAGCTGATTCCAGCTCTGAAGCAGAAAGTTCAGAAG
AAGAGGAAGAGAAACCTGCGAAAAAAGGTAATTTCATTAATATCCttggt
ctttattttattattagtgaggttaagtaaatcagtaaaatcacgacgac
gaacgaaaatttaaaatttctttcaaccaatcaaaagtAATTAGCTGATT
TATTTTAGCCCCACGTTAAGTGATAGCTCCcaagtacataggtcccccca
aaaaagtggtgtTCTTCCAGGCCCCTCCGTTGGGAAAAATTTCACAACCA
GcagggggctgacgctatgaaGTGNAAAAAAGTGGTGTTCTTCCAGCCCC
CTCAAAAAAGTGGTGTTCTTCCAGCCCCCTCCGTTGGGAAAAATTTCACA
ACCAGcagggggctgacgctatgaaGTGTTTGCTTCTGTGGTGTGGGAGA
GGGCTGCTTTAACATCATGCTTTGTCATTATAAGCATGCTGTCTTAATTT
ATGGTGTGCTGTTTAAGTGGAGGCATGCGTGTCACATCAAATGATTCAAC
atgagaaaaaaaacgaaattctATCTTTTTTAAGCACCAAAACGAAAGAA
GGATTCCTCATCTGAAGATGAAAGTGAAGAAGAGGAACAGCCCAAAAAAC
GTACGTAATATGTCTTTAACTTAAGtgttttttcagatttggtTCATTTT
CACCGGCTCATTTTCATGTTGAGTGACCAAGGCTTTTCTCAGGTCACGAG
CTCCCCAGCATGTATTCTGCAATGCTTGGGTCATATCACCAGAATGTAAT
ATTTCTAAAACTTGCCAACGATTTTAAGAACTTTTACGACCTTTTATTAT
catagaaaaagaagaaaagaaaaatttgaaacgtAAAGCAGACGATTTGG
GAGATGTCAATACACCAAAGAAAGTAAAGGAAGCAACTTCTCTTTTCATT
GGTGGTTTATCATACTACACAACTGAAGATGGACTTCGACAATTTTTCGC
AGATAACGAAATTAATCTTACTAATTGCCGTATTATTACTGATCGTGAAA
CAGGAAAATCAAGAGGATTTGGATACGCTGATTTTGACAGCCAAGAAGAA
GCAGATAAATGTTATAAAATTGAGGACACTACTTTAGACGAACGTCAATT
ACGCTTTGATGCCTCTAATAGTGGAGCTAAAACGCCGGGTAGTGGTCGTG
GTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGCTAATCGCAGTGGT
GGTCGTGGCGGCCGCGGAGGATTCAACCGAGATAACGAAACCCCAACAAA
ATTATTACTTGTGAAAAATCTCTCATATGACACTTATAATGAATCTTTGA
TGAGTAAATTTAGTGGCGCTAATGATGCTCGAGTTGTTAAAGACCAAGAT
GGAAATTCTAGAGGTTTCGCTTTTGTTGAATACGATTCAATCGACGACGC
AAAAGCAGCTCACAAAAGGATGTCCGGTAAAGATGTTGATGGACGTTCTG
TAACAATCGTTTATGCTACACCAAGAGAAGATTTCAAACCAGGTAGTGGT
CGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTGGCGGCCGTGGAGGTGG
CCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGTGGTCGCGGGGGCGGCC
GTGGAGGTCGTGGTGGAAGTACACCATCAAACAAAGGAAGCATCCAAAAA
TTCGAAGGCTCCAAACTGACATTCGATAATGATTCAGATTAAAGAAACAG
ACAGAATGATAAGAGATTGTCGTCGTTATTAACGTATAGAGAGGATCGGG
ATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGTTTCCCTTCTTCGA
ACACTTGATGAAACTTTTACGAGGAACTCCTCTGTAAATAAACGAGCTCA
ACTAATTAGCTTGCTTGAAACAATGATGAACGTTGCGTGTTTGTATTGCA
ATGTACTTATTTGGTTTATGATTCTATTTGAAGGTGCGCGGGCTGACTCC
CATTCCTTGCTGTCTTACAAATATATAACTTGCCGAAAAAGCTCCTTGTG
GTCCGTTacgaagttttgaaaaaacaaaatctaGCTAGCAAAAATTATTC
TCATTAAATTTGTGTGCTTACCATATATTGACATTGAAAGTCAACAATTC
TTTACATTAAGACTCATTGAtcacatttttatttcatcctATGTGCGTAT
TAATACCTTCAAACGGGCTATAATAAATAACAAtacattatttttttgta
tttttttcatggTTTTCAATTGGCTTGGAAacttttataaacaaaacttt
tacAGGACATAATACTTTAttatacatttttaatttttgtcattttttgg
taaaaaagacATCGGATATACGGACAGTGGTAAATAAAAGATTACGTTTT
CTGAACACTCCACTCCCTTCAAAATGCagtacatgtttttataagcatat
cttaGGCTCAGATATTgggaaaattaagcatatgtcTTGAGGAAATTGAT
CTacttaaaagaaatactttgtTGGAAGGATAATTTTAAGTAAATGATtt
caaagctttaaaaaaaattcgataTAATGgag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054172-exon-scaffold_242-1491911889:69479..69802TCONS_00054172-exon-scaffold_242-1491911889:69479..69802Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1510915933:69479..69802TCONS_00054172-exon-scaffold_242-1510915933:69479..69802Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1575043694:69479..69802TCONS_00054172-exon-scaffold_242-1575043694:69479..69802Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1491911889:70811..70930TCONS_00054172-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1510915933:70811..70930TCONS_00054172-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1575043694:70811..70930TCONS_00054172-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1491911889:75797..75889TCONS_00054172-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1510915933:75797..75889TCONS_00054172-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1575043694:75797..75889TCONS_00054172-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1491911889:78228..78305TCONS_00054172-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1510915933:78228..78305TCONS_00054172-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1575043694:78228..78305TCONS_00054172-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1491911889:78813..78878TCONS_00054172-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1510915933:78813..78878TCONS_00054172-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1575043694:78813..78878TCONS_00054172-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1491911889:79084..80810TCONS_00054172-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1510915933:79084..80810TCONS_00054172-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054172-exon-scaffold_242-1575043694:79084..80810TCONS_00054172-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69479..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0312943	0	0	0	0	0	0	0.177363	0	0	0.433628	1.16281	1.07199	0.761969	0.624654	0.0885604	0.765163	0	0.844942	0	6.8664e-06	0.189669	0.0122171	0.245823	0.353828	0	0	0.00207768	0.153713
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054172 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top