TCONS_00054169 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054169
Unique NameTCONS_00054169
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2795

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054169 ID=TCONS_00054169|Name=TCONS_00054169|organism=Clytia hemisphaerica|type=transcript|length=2795bp
AAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGTTTACAATATCA
AAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAA
CCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCT
TTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaa
atggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATC
CAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAG
AGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTACA
ACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGTGACAGTAG
TGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAATGGAAAAG
CTAATGGGAAGAAAGCCCCATCTAAGAAAGTAGCAGCAAAGAAAGAATCA
AGCTCAGAAGAAGACAGTAGTGATGAAGAGGAAGAAAAACCCAAAGCTAA
AGCAAAAGCTCCAGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCGG
AAGAAGATAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAA
GCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGACAG
TAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGCTCCAGCTA
AGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGAT
GAAGAGGAAGAAAAACCAAAAGCTAAACCTGCCCCAGCTAAGAAAGTAGC
AGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTGATGATGAAGAGGAAG
AAAAACCTAAAGCTAAAGCAAAAGCTCCTGCCAAAAAGAAAGCTGATTCC
AGCTCTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAA
AGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAGAAG
AGGAACAGCCCAAAAAACaaaaagaagaaaagaaaaatttgaaacgtAAA
GCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAGGAAGCAAC
TTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGATGGACTTC
GACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCCGTATTATT
ACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCTGATTTTGA
CAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACACTACTTTAG
ACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTAAAACGCCG
GGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGTTTCTCAGC
TAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCGAGATAACG
AAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATGACACTTAT
AATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCTCGAGTTGT
TAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGAATACGATT
CAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTAAAGATGTT
GATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAAGATTTCAA
ACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAGCGGTGGCG
GCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTCGAGGTGGT
CGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCAAACAAAGG
AAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAATGATTCAG
ATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTATTAACGTAT
AGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGCCCTCAGGT
TTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTCCTCTGTAA
ATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGAACGTTGCG
TGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTTGAAGGTGC
GCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAACTTGCCGAA
AAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaatctaGCTA
GCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATTGACATTGA
AAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttttatttcat
cctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATAACAAtaca
ttatttttttgtatttttttcatggTTTTCAATTGGCTTGGAAactttta
taaacaaaacttttacAGGACATAATACTTTAttatacatttttaatttt
tgtcattttttggtaaaaaagacATCGGATATACGGACAGTGGTAAATAA
AAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCagtacatgtt
tttataagcatatcttaGGCTCAGATATTgggaaaattaagcatatgtcT
TGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGGATAATTTT
AAGTAAATGATttcaaagctttaaaaaaaattcgataTAATGgag
Run BLAST on NCBI

transcript from alignment at scaffold_242:69458..80810+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054169 ID=TCONS_00054169|Name=TCONS_00054169|organism=Clytia hemisphaerica|type=transcript|length=11353bp|location=Sequence derived from alignment at scaffold_242:69458..80810+ (Clytia hemisphaerica)
AAAGGTAATAGTTTTCTATCCATTTTAGTACAGCCTCGTTTACAATATCA
AAATTTACGCTTGGGTGTCCGCTAGCGTGATTTTTCATCCATGTGCTAAA
CCAAGTTCTTTTACAAATATTGCTGAACGGCTTGCTGTTGGAGGGAATCT
TTGGTGTGTAATTTGCTCTAAATTGCTcttaaattcaagaaaatacaaaa
atggtCAAAGCAAAGACAAAAACAATAAAGGCAGAGGAAATTCCAAAATC
CAAGAAAGCTAAAAAAGTTGAAACTGACTCTGACTCGTCATCTGAAGAAG
AGGAAGAAGTCAAAGTCGCACCAAAGAAGAATGGAAAAGTCAATGGTATG
TTTTTTACATTAGATTAgacatttgatattttatgcCTAACATCAGAGTA
ACTGGGATAGGAAAAATACAGTGGGTCTCAGGGAAGTTTAGGAAAAAGTA
GCTGTAACAAAAATGACTATGCTATCAACTTTGTTGGAATTTCACAATTT
GTAAGCTTGTAAGGCTTGTAAGACCCTCAAGGATACCTGGTGTAGGCGAA
TAGGTAGATAAGGGGCATTTGACTGCCTGGATGCAACTGGAAAGATCCAG
GCGTTCTGTGGGATCCTAGGATTGTGGGGAAGCATCTGCCTTTAAAAAAC
AGAGGCGCACTGATATGTCTCTAAACAAGTCCAGGTCCCATGAGTCCAAT
CCAAGActgtttgaaatttattttaaatttcctATTTGGAGTTACCAAAA
TTCTTTATGAAAATCATTTAACACAAAActtgatcaaatttaaaatgtaa
aagCAGCAAATATATATACAGAATAGAACAGAAAAATGAAGTGACTGCTT
TTGTAGAAGCGGTTGTTGTGTAGCGCTTTGTAAggcaaaaaatctttgaa
aattgcagataaaatctttaaaaaaacacTTGATGATCAAGAGGCTGGCT
ACGTTGAATCTACAAAATTATTTGGATAGTATTGCCAAAAAATCTGACAA
ATATTACGACTAGAAAAGGGTCAGATTTTTAAGATAGAGCGTGAGCGAGT
TGGAGGACTTGAACCAACTTATTTGTGACCCAGGCCTAGCTCAACAAAAC
CATGTCCCAATCAAAGATAAAGAAGAGGAATGTGGAATTATTTCTGCATT
TCGATCAGCTATCGAAACATAGAACTATTTCTTTAATGTGGTTTAAATTG
TTTTTagtatttacattttttgtgaaatttctagCTTCCATTTGAAAAAG
GATATCATTTTTTTTTGAGTCACAAAAGATACGGAAATTACTACATAGCA
GTCAGCTGTAAATAATTGGAAATAAAgttaattaaattttcaaaatgatt
tagGTACAACCAAAAAGCCTGTCAAAAAAGAAAGTTCATCAGAAGACAGT
GACAGTAGTGAAGAAGAAGCCAAACCAGCAAAGAAAAATGGAGTAGCAAA
TGGAAAAGCTAATGGGAAGAAAGGTAAAATTTTCAGTTACAGTACACATT
gctatatcaattttttttaaatatatcatTTAGTAAGATTTTGCTGAGGC
TTGgcttttcttatatttttggcCCTTTAAGCCTCAAATTTTTCTTATCC
TGTTCTCATggggtgtaattgaggtataTCAAgcattatacccaattttt
actactttgaccccaaaattagtatttttctTAAATATTCTAATGCTtcg
gcgattttgagcctcaaagtgtataccttattacacaaatattactagtA
TTTTATTAACACAAATTGAAAAGTTTCATGTTAATAAAAACCAGCCGTGA
TGTCCTTGaagaagcaaataaaatttgtgttaattttttgcgtgttaatt
tcaaggtcATTGAATACTTTCCTCGTAATATTTGTGCAATAAGGTAATTA
tattattttctggtttacagacattatgaggaaaagttttggacaggagg
atggaaaaaaaaataaaaataaaattaatgttttaaatttttttttagtt
tctttttaaaaatctgaattcaaaggaaataataaaataaaattttacga
aatttccTAAAGTatcaaatttttagatttaaagacaaaagaatAAAGTG
CAAGATGTTGTGTAGATTAGTTTTAGATACGCATCTACggataaaaacat
aaaaaatgtacACATAAAGACTGATATGTGTTTATGTAAGACTGAcgtag
gttcccacttaggttcccccatcccacttctGGTATGCCTATTTTTCTAT
CTACTCTTGAATTTTAACAATCACATAAAGGACCCTGAATAAAAGCaatt
acaataaaaaatcaactgcGTAACACAAGAGTTGtataatttagtttttt
tttatttacttgcCTAAACCTGGAAAGTAAgacagaaaaaattaaattaa
aaattaaaaaaattaaaaattgatagATATCTCATATAATACTCAGTACT
GGGCAATACCTAGTTAATTTAACATATGGGGTATATTTTGgggcaaaaat
ttaatttttgacaaTCTAATTTCACTTATTGGATTTTGAGGAAAGTTAGC
TAAAATGTTTGTTTTAACCTACAGCACCAGCAAAGAAAGAATCAAGCTCA
GAAGAAAGCAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCTGGTAA
AAAGTTTAAagcctttaaattgagaaaatgcaGATTACACACACAGATCT
AGGGGGTTTAAAAGATCTTTGTGAAactaaaaaatttttgggggattttt
tttcattcaacaaccaaatttagaaaattagtATTAATAACATTATTTTG
GAATAACAGACATGAAGACAATCCCATCTTAGTCTTCTCAGGACAAATAC
AGCATTTTCTAGAGCACAATGTTGGTTTTACTACACaaataatcatattt
ttcttctttttttgtcaaACTGATACTTTACCTTTACTGCGTTTTTGCAT
AATCAAAGATAGAAGtgcttttttgagagaaaaaaacagttttgaaaact
aattttagGTTTTAGTACTGCCACTTGTAGACCTTaagtagtaagtctgc
gaccgcagtcggaggcgacccgaaggctcctctttcgatagctgtctacc
cgaaggtaggggagggcgccactctttctcNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNggttttttcacctttcaaagtctctctaagggtc
ggaaaaatcagaaagttttaaattagtctctctaagggtcggaaaattca
ggaattttatgaaattttttgatttccagagaaaaagttgtaataaagtc
tctctaagggtatgacttttttcaaaaatcgaaaaaaaacattcaaagag
tctctctaagggtcaccttttcagcaaaaatcagtctctttaagggttgG
TTTTCAGAGGTCCCATTCgtacatacccctcattcgccaaccctagtacc
ccccggatgaacgttatgtacagaaaaattttatcaCAACTAAAAAAGTT
CTAAGATCTGCTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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GTATCTGGatcctgaccccccccctgaccAAAAAGGGTACTTTTTGTAGT
GTTTTACCACCAAAAAGGCTGTGTTAAATATATAAAGAAAGCAGTCATAA
ATAGTAAAAAATTTATAAGTGATAACAAAACAGGCCATGTCTTAGAAAGG
TAGCGTCCATTGGTGACCAAAAAGGGTACTTTTTGTAGTGTTTTACCACC
AAAAAGGCTGTGTTTAGTGAAAGGGGCAGGATCAGTTAATAAGTGGGCGC
TAAAAAAGGGCATTAAAAATGGTCAGACAACAGAACACATAATTGTTCTG
GGTTTCGTCGCTCAAATTGAATTGATAAAGAGGGCGAAATGTTATCAAGA
TATTCTATGTTTCTTTTAAGTGCATTCTAGACTACTCTTACTTTTGCGGG
CAGTGCAAAATGTTGTGTGGATATTTCTCAATGGTGTGTGATATGCTTGT
TTACCAGATTTGTCTTATCTAACAACTTTTTTGATTCAGCCCCATCTAAG
AAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTAGTGATGA
AGAGGAAGAAAAACCCAAAGCTAAAGCAAAAGGTACAAATTAATGCAGTG
ATCTCCTTTAatgtttgaaaatctctttcaTATCATGTGATGCtgcaaaa
ttttgaagattaatTTTCACATCTAGATTGGGTTATATAACAAGAAAACA
TGAGTTAATACCTGCCTTATGGATCATATGGAACAGTGTTGTTGGGCCTC
CTAAAGTTTCCTGAATTGTCCTAAATTTTGAAGCCATCTAAAATCTCCTT
TGAAGGTGAAATTTTGAACATACAAGTTTCAGAAATTTGATTGTGTTTAA
ACAGTAATAAATGCAAGCAAAtctctttgattctttttagCTCCAGCCAA
GAAAGCACCAGCTAAGAAAGAATCAAGCTCGGAAGAAGATAGCAGTGATG
AAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATGATTATGTTGTTT
TGGTAAGAAACTAACTTTGACCTCTATTTCATATAATTGATCCTGGTACA
TCACAAATGACTCTTTTGCTTAAGTTTCTGTCACAACAAACTTTGGATTT
AGACACTTAAAGTTTTGACACTCACATGACTGATTAATATTAAagtttcc
attttcattttaatcCATTAACATCTCTTTCAGCTGAAAGCCGAAAGTCT
GAGATAGCcttgtccaaattttcgtaatCTTACTAAAACATTGCATTTTT
TAGCCCCGGCCAAGAAAGCACCAGCTAAGAAAGAATCAAGCTCAGAAGAC
AGTAGTGATGAAGAGGAAGAAAAACCAAAAGCTAAAGCAAAAGGTATAAT
GATCTTATTTCATATATAGGTAGTGGTTACTTTTTAAAGGATAGGTTCTA
CAGTTCAATATTCTTAGTACGCAGCTGTGTATTGCTTCAACATCTGATTG
TACAGATTTTTctccaaatttaaatttctacAATTTTGAAATGAAGTTAA
AGAAATTTGTTCCCTTGATGTTTTGAAGGTCTATCTGAAATAAAAAGCTT
TGCTTTGAGCATTGCAATTTTCAAATCTTGGTTCAATTTTTTTAAGCTCC
AGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAGTA
GTGATGAAGAGGAAGAAAAACCAAAAGCTAAACCTGGTAAATAGTTTGAA
ACATGCCAAAGATTTATGAAACTCTAccatttaaagggataatcagatgg
gttgagatttttttgtttttactaaaagtcaaaaacttctTGTAACATAA
TTACCTTTGCTTTAGAAATACTtaattaaaaagattttgagGTTTGCTTA
GGAAAATAGAAGGATTCCGCATACCAAATATCCCAAACCCATAGTGTGCA
GTGgggtctgacccccccccccccccttttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccccccatttataT
TTCATTCCCCCTATATTTGCATTGGTTGGCAAAcaatatcatactccagg
atgcaagtcTCAAATTTTCAATCCGTTGGTGGCTAAATAGGGCATTTTTT
CCTAAGTTgttccactaaaaaggctgtttttaccaatattttagtaattt
caggaGGGGAAGCGGCTGATAACCAGACGCTTAAAGGGCATAAAAAATGG
CCTGATAGAAAATAAGGGGAAATAAGAGAGAGCAGACCACTTTTCATACC
ATTCAAGCATCTTGTAATATGATGCTGTCCCTATGAGAACGTTAAAATTA
TTGTGAAAACATCCCTTTTAAGTTTTacaggaaaaaatgtttcaaattgt
CATTTAAGCTTAAAATATGGAATTTTGGCTTTAGTGAGCATGCATTTGGT
GAACctaattttgcagaatttaatttcgcggttttagacAAACACACAAA
TATTCTCATGAATAAAGAATAACctataaaattggtctttttaggcaATA
AAGgacatattttaaacaaaacatCCTCTCAACCGCAAAATTATATTCTG
CAAAACTtccgaattttgagctgtgaaccaCTAAATGAAATCCCGTGAAA
ATATCTTCCCTCAAGTTCATATCAAATGCTTATTCTTTTTTAATTCAGCC
CCAGCTAAGAAAGTAGCAGCAAAGAAAGAATCAAGCTCAGAAGAAGACAG
TGATGATGAAGAGGAAGAAAAACCTAAAGCTAAAGCAAAAGGTACAAACC
GAGGAAGTCctgttttgtaatattttgataaagaaaCCAAAGTTTTCTTG
TTGTCACTTTTGTGACTTCTGAATTGTAGGTTTAGTTTCAGCTGATTTTA
TATTATGATTTAATATTTAGCTCCTGCCAAAAAGAAAGCTGATTCCAGCT
CTGAAGCAGAAAGTTCAGAAGAAGAGGAAGAGAAACCTGCGAAAAAAGGT
AATTTCATTAATATCCttggtctttattttattattagtgaggttaagta
aatcagtaaaatcacgacgacgaacgaaaatttaaaatttctttcaacca
atcaaaagtAATTAGCTGATTTATTTTAGCCCCACGTTAAGTGATAGCTC
CcaagtacataggtccccccaaaaaagtggtgtTCTTCCAGGCCCCTCCG
TTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGNAAAA
AAGTGGTGTTCTTCCAGCCCCCTCAAAAAAGTGGTGTTCTTCCAGCCCCC
TCCGTTGGGAAAAATTTCACAACCAGcagggggctgacgctatgaaGTGT
TTGCTTCTGTGGTGTGGGAGAGGGCTGCTTTAACATCATGCTTTGTCATT
ATAAGCATGCTGTCTTAATTTATGGTGTGCTGTTTAAGTGGAGGCATGCG
TGTCACATCAAATGATTCAACatgagaaaaaaaacgaaattctATCTTTT
TTAAGCACCAAAACGAAAGAAGGATTCCTCATCTGAAGATGAAAGTGAAG
AAGAGGAACAGCCCAAAAAACGTACGTAATATGTCTTTAACTTAAGtgtt
ttttcagatttggtTCATTTTCACCGGCTCATTTTCATGTTGAGTGACCA
AGGCTTTTCTCAGGTCACGAGCTCCCCAGCATGTATTCTGCAATGCTTGG
GTCATATCACCAGAATGTAATATTTCTAAAACTTGCCAACGATTTTAAGA
ACTTTTACGACCTTTTATTATcatagaaaaagaagaaaagaaaaatttga
aacgtAAAGCAGACGATTTGGGAGATGTCAATACACCAAAGAAAGTAAAG
GAAGCAACTTCTCTTTTCATTGGTGGTTTATCATACTACACAACTGAAGA
TGGACTTCGACAATTTTTCGCAGATAACGAAATTAATCTTACTAATTGCC
GTATTATTACTGATCGTGAAACAGGAAAATCAAGAGGATTTGGATACGCT
GATTTTGACAGCCAAGAAGAAGCAGATAAATGTTATAAAATTGAGGACAC
TACTTTAGACGAACGTCAATTACGCTTTGATGCCTCTAATAGTGGAGCTA
AAACGCCGGGTAGTGGTCGTGGTGGACGTGGAGACCGCAGAGGTGGTGGT
TTCTCAGCTAATCGCAGTGGTGGTCGTGGCGGCCGCGGAGGATTCAACCG
AGATAACGAAACCCCAACAAAATTATTACTTGTGAAAAATCTCTCATATG
ACACTTATAATGAATCTTTGATGAGTAAATTTAGTGGCGCTAATGATGCT
CGAGTTGTTAAAGACCAAGATGGAAATTCTAGAGGTTTCGCTTTTGTTGA
ATACGATTCAATCGACGACGCAAAAGCAGCTCACAAAAGGATGTCCGGTA
AAGATGTTGATGGACGTTCTGTAACAATCGTTTATGCTACACCAAGAGAA
GATTTCAAACCAGGTAGTGGTCGTGGAGGACGAGGTGGTGGATTCGGCAG
CGGTGGCGGCCGTGGAGGTGGCCGTGGACGTGGTGGATTCGGCGGCGGTC
GAGGTGGTCGCGGGGGCGGCCGTGGAGGTCGTGGTGGAAGTACACCATCA
AACAAAGGAAGCATCCAAAAATTCGAAGGCTCCAAACTGACATTCGATAA
TGATTCAGATTAAAGAAACAGACAGAATGATAAGAGATTGTCGTCGTTAT
TAACGTATAGAGAGGATCGGGATGATCTCTCTTAACGGCTGCTGGCTGGC
CCTCAGGTTTCCCTTCTTCGAACACTTGATGAAACTTTTACGAGGAACTC
CTCTGTAAATAAACGAGCTCAACTAATTAGCTTGCTTGAAACAATGATGA
ACGTTGCGTGTTTGTATTGCAATGTACTTATTTGGTTTATGATTCTATTT
GAAGGTGCGCGGGCTGACTCCCATTCCTTGCTGTCTTACAAATATATAAC
TTGCCGAAAAAGCTCCTTGTGGTCCGTTacgaagttttgaaaaaacaaaa
tctaGCTAGCAAAAATTATTCTCATTAAATTTGTGTGCTTACCATATATT
GACATTGAAAGTCAACAATTCTTTACATTAAGACTCATTGAtcacatttt
tatttcatcctATGTGCGTATTAATACCTTCAAACGGGCTATAATAAATA
ACAAtacattatttttttgtatttttttcatggTTTTCAATTGGCTTGGA
AacttttataaacaaaacttttacAGGACATAATACTTTAttatacattt
ttaatttttgtcattttttggtaaaaaagacATCGGATATACGGACAGTG
GTAAATAAAAGATTACGTTTTCTGAACACTCCACTCCCTTCAAAATGCag
tacatgtttttataagcatatcttaGGCTCAGATATTgggaaaattaagc
atatgtcTTGAGGAAATTGATCTacttaaaagaaatactttgtTGGAAGG
ATAATTTTAAGTAAATGATttcaaagctttaaaaaaaattcgataTAATG
gag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034176XLOC_034176Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054169-exon-scaffold_242-1491911889:69458..69802TCONS_00054169-exon-scaffold_242-1491911889:69458..69802Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:69458..69802TCONS_00054169-exon-scaffold_242-1510915933:69458..69802Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:69458..69802TCONS_00054169-exon-scaffold_242-1575043694:69458..69802Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:70811..70930TCONS_00054169-exon-scaffold_242-1491911889:70811..70930Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:70811..70930TCONS_00054169-exon-scaffold_242-1510915933:70811..70930Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:70811..70930TCONS_00054169-exon-scaffold_242-1575043694:70811..70930Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:75797..75889TCONS_00054169-exon-scaffold_242-1491911889:75797..75889Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:75797..75889TCONS_00054169-exon-scaffold_242-1510915933:75797..75889Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:75797..75889TCONS_00054169-exon-scaffold_242-1575043694:75797..75889Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:76198..76290TCONS_00054169-exon-scaffold_242-1491911889:76198..76290Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:76198..76290TCONS_00054169-exon-scaffold_242-1510915933:76198..76290Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:76198..76290TCONS_00054169-exon-scaffold_242-1575043694:76198..76290Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:76561..76650TCONS_00054169-exon-scaffold_242-1491911889:76561..76650Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:76561..76650TCONS_00054169-exon-scaffold_242-1510915933:76561..76650Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:76561..76650TCONS_00054169-exon-scaffold_242-1575043694:76561..76650Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:76904..76993TCONS_00054169-exon-scaffold_242-1491911889:76904..76993Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:76904..76993TCONS_00054169-exon-scaffold_242-1510915933:76904..76993Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:76904..76993TCONS_00054169-exon-scaffold_242-1575043694:76904..76993Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:78006..78098TCONS_00054169-exon-scaffold_242-1491911889:78006..78098Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:78006..78098TCONS_00054169-exon-scaffold_242-1510915933:78006..78098Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:78006..78098TCONS_00054169-exon-scaffold_242-1575043694:78006..78098Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:78228..78305TCONS_00054169-exon-scaffold_242-1491911889:78228..78305Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:78228..78305TCONS_00054169-exon-scaffold_242-1510915933:78228..78305Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:78228..78305TCONS_00054169-exon-scaffold_242-1575043694:78228..78305Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:78813..78878TCONS_00054169-exon-scaffold_242-1491911889:78813..78878Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:78813..78878TCONS_00054169-exon-scaffold_242-1510915933:78813..78878Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:78813..78878TCONS_00054169-exon-scaffold_242-1575043694:78813..78878Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1491911889:79084..80810TCONS_00054169-exon-scaffold_242-1491911889:79084..80810Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1510915933:79084..80810TCONS_00054169-exon-scaffold_242-1510915933:79084..80810Clytia hemisphaericaexon
TCONS_00054169-exon-scaffold_242-1575043694:79084..80810TCONS_00054169-exon-scaffold_242-1575043694:79084..80810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:69458..80810 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
75.1255	75.5167	17.5174	12.9863	203.385	161.686	126.616	152.87	148.205	165.801	216.15	221.229	528.957	531.189	299.026	352.593	163.75	218.382	84.7735	98.7631	325.866	350.56	196.72	186.265	116.656	117.532	114.569	209.312	131.14	145.289
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054169 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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