TCONS_00054108 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054108
Unique NameTCONS_00054108
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1465

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054108 ID=TCONS_00054108|Name=TCONS_00054108|organism=Clytia hemisphaerica|type=transcript|length=1465bp
CTGGAAAGTACTCAATACAATACAATCGAAGGTTTTCAATATGATCAAAA
GTAatcgaaatgattgaacaaattgAAAATGGTTGAAGAAAGAGTCaaGT
TATAATATCAACAAGTAAAATGATGGACGCAGATGAAAGTTGCACCCAAT
TTTCCAACGACACGATTGAACAGATAAGACAACTTCAAAGCAAGTTTGCC
ACAGATCGTGACTGGGACCAATTTCATACTCCAAGAAATCTTCTACTTGC
AATGGTTGGGGAAGTTGGCGAGCTTAGTGAAATCTTCTTGTGGAAGGAGG
ATTTACAGCATGGCTTAAAAGGTTGGTGTGAGAGTGAGGTACAACATTTG
GGTGAAGAATTGAGTGATGTTTTGTTGTATCTCATCAGGTTATCTGAAAA
ATGTCATTGTGATCTGTCAAATGCTGTCAAACAACTCCTTAACAACAAAT
ACCAAATAGCCGTAGAAACTGACGAGGTTGTTACAGCTGATGAGAAACCA
GCCCAAAACAAATTTGCTTTCAGTcatttatcatttgaaaatatTCGTCA
CCATTTATCAGTACTAGACCGAGATATCGAGaaggaatttcaaaaacatt
cacaaaaatCCATTACACTCGCCTTGGTACGTGATGTTGGGAAAGTAGCA
GAATCTTTCCAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCAgGATGGTC
AACCAACGAGTTATCAAAACTAACCAACCGTCTAGCTGTAGTTTTGGTTG
ACCTAGTATTTCTATCTCTAAGATGTGAAATCGACCTTCCGAACGTTGTT
AAGAAGAAGATTATCAAAAATGGCTTGAAATATCCGGTGGGGCTTTCGAA
CGGATCCTCAAAGAAATATACGGAACTGAATGGAAAACTGGTTGCAAATG
GAGTTTGAAGAAATGGAAATTTGTTGAAGAAAGTGCAGACCGTCACATTA
ACTTGTGCGCTGCACAGGTTCATTTGGCCCTGTTTAGAAGGCTTCGACGC
AAACCATTGATTTcttaatttcatgaaatttaacGTTGCAGTACATTGGA
GATTTCTATTCAAAACTCAGGCTTGTTTCTTGACACAACAGTTAGTGGAC
TGACCTATATCGACGTACTAACGTTACTCCATGTTGTATTCGAGCCAGCA
ATACATTTCGTTGATGGATTTGTAAATAAACTGTTCATATGGTGGTATGT
TGATGTGACAATATTATTATTGTTGTAGAATCGTTAAGTATCAGCATTTT
ATTAGCCTTGTCATTGTAGGCATGGACGTCTGTATCTTTAGAAGTTTGAC
GTTCTAGTGAATTTCACTGATGTTGCTGGAAAGATAATAGTTTTCTTTGG
ACACCTCTCCAACATTAATATAAATGTTAAACGTCAGGGAATGAAGAGGT
TGACATTTTACATTAGCATATTCTTAAAACAAAGATACATGTAATCTTAA
CTGATTGCAAGACTA
Run BLAST on NCBI

protein sequence of TCONS_00054108-protein

>TCONS_00054108-protein ID=TCONS_00054108-protein|Name=TCONS_00054108-protein|organism=Clytia hemisphaerica|type=polypeptide|length=262bp
MMDADESCTQFSNDTIEQIRQLQSKFATDRDWDQFHTPRNLLLAMVGEVG
ELSEIFLWKEDLQHGLKGWCESEVQHLGEELSDVLLYLIRLSEKCHCDLS
NAVKQLLNNKYQIAVETDEVVTADEKPAQNKFAFSHLSFENIRHHLSVLD
RDIEKEFQKHSQKSITLALVRDVGKVAESFQWKGEVEVNLPGWSTNELSK
LTNRLAVVLVDLVFLSLRCEIDLPNVVKKKIIKNGLKYPVGLSNGSSKKY
TELNGKLVANGV
Run BLAST on NCBI

transcript from alignment at scaffold_24:162657..171740-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054108 ID=TCONS_00054108|Name=TCONS_00054108|organism=Clytia hemisphaerica|type=transcript|length=9084bp|location=Sequence derived from alignment at scaffold_24:162657..171740- (Clytia hemisphaerica)
CTGGAAAGTACTCAATACAATACAATCGAAGGTTTTCAATATGATCAAAA
GTAATCGAAATGATTGAACAAATTGAAAATGGTTGAAGAAAGAGTCAAGT
GAGTATTCGATCACCGATAAAATCGATAGGTGGTCACTGACCACCTTCAA
TTATTATCGATCATTATTGATTCGTTCGATCACTAAGTGGATTAAATTTT
GCTTGGATTAATTTTTGCAAATTTAGCAAACTTTGGCTGTTTTTATGAAA
ATTAGTCCTTGTGAAATATTTTAAAATCACAGTATTGGCCAAAGGCCTAG
GAAAATAAAACAAATATCAGGCAAAAAAGAGGTAAATGGTTCATTATTGT
TTTGTTTTTTTTAATTACAATCATTTAATAAAGGTTATAATATCAACAAG
TAAAATGATGGACGCAGATGAAAGTTGCACCCAATTTTCCAACGACACGA
TTGAACAGATGTGAGATCCCTTTTCTTTCATCAGAACCATGACATAAACA
TTTTCAAATTGCAATCTTAAGTAAGTTTGATTACAATGGCTAAAACATCC
TCAAATGACATCCAAATAAAACAGTAACACAAATTTTTAAAACTCCATCA
TCTGTAAGAATACTCTTGACTTTTAAAGGAATTAATTCATGATTCACTTC
TTTCTAAATATTGTAGAAGACAACTTCAAAGCAAGTTTGCCACAGATCGT
GACTGGGACCAATTTCATACTCCAAGAAATCTTCTACTTGCAATGGTACA
TTCTTATTTTCCCTAGGGGAACTTCATTAAATTTTTATATTGATGTGTTT
AAAGTTTTTCCATCTCTGATGAATTTCCATCGCAAATAAGTGTAGTGTCT
TTCTATTTCAAAACCTAGTAAAAGTCAGCTAAATATAAAGAATGATCCAA
TTTATGTTCGACATAGAATGCTTTCCTTTAACTGCAATATTTAAAAATAA
CTTATCAGAAATTTTTATACTGGAATCAATCAATAGATTCAATTAGATTG
GTAGTATGAAGGTTTCGATCACAAACTTGCACCGCAATGGATTGTGTTCG
AATCCCAAGCACTTCCAGTCAGGATGTTAGGGAAACATGGTGATAGAGCC
TCTCCCTTCACTCATAGATTTTGTTTATTTGATTGTTGAAATTATACTTA
TTTGAAGATAAATAACAATCAGAGTTTGAGAGCTATCATAATCTTCTATG
AATTTAGGTTGGGGAAGTTGGCGAGCTTAGTGAAATCTTGTGAGTCTTTT
TGTGTTATCTTCAGGACTGCAGATCCTACAGATCCCTAAACATACATTTT
ACTACTGATTTTTGGACCTACCCGGAGGTCCTTTAATTTGACCGTTGTCC
GTTCGTCTGTTACAAGCTTTTCTCGGGATTGGCTCATTAGTTTTTTTTAA
TTTTTTGCACAATGATACAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
CACAATGATAAAAGAAAATAAATCAGACGTTTTTGCATTGTTCTAAAACT
TATTGTGTTTGCTCAATACCAATAGTAAAATATGTAGAATACCTACTTTT
ATCTCATATTGATCAAGGTAGGTCCATTCAGCATGTTGCTTGTTACTCTA
AAAGCGAACCCTGAAATTGCGATCCCTCTGCTGTTAAAGGTCATAAGGGC
TCTGAAGAATTCTCCATTTTTTGGTAAGGATGAACTTTGTTCACACAAAA
AAGCAGATTTCATGGACAAACAGGGACAAGACTTTCGTAAAAAAAATTTC
CAATGAATAGTTTTTCCTCAATCTTCAAGGGCCTCTGGGTTACAATGCCC
TAAAAGATTATGTACACTTGTTATTAGCATTATTTAAAACCTACTAAATG
ATCTTTTGTCCTCTTTTTCTAGCTTGTGGAAGGAGGATTTACAGCATGGC
TTAAAAGGTATTATATACATCAGGAATAATGATGCCATATATTTATTTAA
GATTTTTCATTTGGTACATTTTTTTGAATTTAAAACTTCCTTGTTCCTTT
GGCTCAATTGAAGTCAGTTGAAAAATCTTCGTATTACGTAATAAAGTTTT
CTCCTGTGCTTTGAAGTTAAAATTTACTTTAACCTTTAATTTGTGATATT
CATGACGTAATGTTTTAAAAATACAGGGGTACACAAGACTGGGTGTTTAC
AACTAATTTTGAATTGAAAACAAAACGCCTACACTATTTTGGACGCTTCT
GTATAAAACATTACGTCATGAATAAGAAGAATTGGTTTTATTCATAGGTT
GGTGTGAGAGTGAGGTACAACATTTGGGTGAAGAATTGAGTGATGTTTTG
TTGTATCTCATCAGGTTATCTGAAAAATGTCATTGTGATCTGTCAAATGC
TGTCAAACAACTCCTTAACAACAAATACCAAATGTGTGTAAGCATTGATT
CAAGATGAAAGTAAAATTTCGTTTGATTTTCGATTTCTTGGTAAAACGCA
ATACACGCTTTTTTTATAAGAATGGTGTAAATCATGGATTATATTCTTAA
CTTTTTTGGGAAGATTATCCCAAAATATCCTTACAGCACTCTTAGGTTAG
GATCCTAATTCTGACTAGATTTCACATTTAGTACATACATCTCAAGCATA
AAATGGCATTTTTGTAAAAGGAGTGCCTCACTATGGGGTAATTAACAATT
TNCGTCTCAAGCATAAAATGGCATTTTTGTAAAAGGAGTGCCTCACTTGG
GGGTAATTAACAATTCATAATTAAAAATGGCTTTCTAAGCTTGAGTAGCA
AAATTCCATGATGGTGATATTCTTGACATATTCTTAATTTGTTGGCCATT
TTCATCATGGACATTCTTATAAAGTATATTCTTACAAAAAAAGCGTGTGT
TCGGATTCATTATCAAGAAACTTTACTTTACTGGCTTTCTGCTGAGTTGC
TTCTAAAAGAAAATATTGAAAAAGTTTTATTTTTACATAAGTGTTTCTGT
TTCATATCAGGCCCATATTTCATATCAGGATAGTGTCTGCCTATTGTTCT
ATCTGCTGAATAAACAAAAAAATGTTTTTCTTTTTCTCTTTCTGACCTTG
CTCCACATCTGTGTCAATCCAATGTGAAATGCTTGTAAATTAAAATAGAT
GAGTAAGCAACCGGTATGACTGTTAATTAAAAACAAAACCTTTAATAGTC
ATGAGGCTAACAGTCAATTCTCAAACGACATGTTGATGTAGGGACAAACC
GAAACTTTTTTAGCCCGTTATCCTCTGTATTTCATTGTGTGTTATTACAT
AATCAAGAAACCGAAAGGATTTTGAAAGTATGCTTGGTTTGTAACAGGGT
TTAAACACCCTCTTTTCCCTGACCCACTGGAAAAATTGATCAAAATATCG
TCCCCATTGGAAAATCATACTCCGATTTTTGTCTCGCTGCAAAAAAGATC
AAATAAATAAATCCCCACTGCTAAATATTATGCTCTTTTTTCCATCCCCG
CTGAGTTTTCTGACTTGAAAACAATGGAATTCAATCTCTGGCAATAAAAA
ACACGGGAAGATAAATCATCATTTAGTTTCATTCCGTTCTTTTTTACCTC
GACTGACTGAGAAGGGTCTGTGAGCAGGGGGCATCCTTAACAATACAATG
TAATTCACAGTCAGTTCTTTCTTTAGAGCCGTAGAAACTGACGAGGTTGT
TACAGCTGATGAGAAACCAGCCCAAAACAAATTTGCTTTCAGTCATTTAT
CATTTGAAAATATGTAAGTATCTTTCAGAAAAATTTCGGCTTTTCTTATT
CCTAGAAGAAATATCTAGCATCTGTACCAACAAACTCTACATCGCTATAA
AGACTACGCTGGTTAAATCTAAGAAGAATAACTTTGTTATGTTTCTTACA
TTTTAGTCGTCACCATTTATCAGTACTAGACCGAGATATCGAGAAGGAAT
TTCAAAAACATTCACAAAAATCCATTACACTCGCCTTGGTAATTTGACAT
TTTTCTTGATGCTACAAAGATTATAAACTTATTCCTCATGAAATTAAATT
CTGTAGTCAACTAGAGACAAAACTTGCACAACCTTTTGAATCCAGCAACA
CCCAAAAAATGGTTTTTTTTCTCGCTAATTCAATTTGTTTAGATTTCTCA
CTAAAAAAAAGTTTTCGGGCGTTTCTGTATATAAAAGATTGTTCCGATTA
AGCTAGGACATTGCTACAACCATAATATTTGCCACAAAAGGGGAAAAATT
CCCTCAAAATTTAAAAGCCCAAGTGATTTTCGAGTGCCTTAAAGTCATGG
GCCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGCATA
TGGCCCCTCACTTTTTTGCAGATCATGTCATATTGAAACTTATGTACATT
AGAACAACTTTTAACAGACCAAATCAAACCATAAAACTATTATTATTCCC
CATTAGATAACGTTTTGTTGTGTTTTGAGGGTGGGCAATATTTCTTTCCA
AAATATTGGCCCCTCCACTCAAAATCGCTCGCCCATGAAGAAATATTATT
TATATTGTTTATTAATGATTAATAAAAAATTTGATTATCAGGTACGTGAT
GTTGGGAAAGTAGCAGAATCTTTGTAAGTATTTATTTCCCAGTGAACTTG
AGTACAGCATAGTAATAGTATAAGAAAGCCGCGGCTGGAATGGTGACGCT
ATTGTTTTTGTCGTAAACAGATGTTCTATCTGTGTCTCCGTGGTTTAAAC
GAAACTCGAAGGTAAGTCGAAGGTAACAAAATCCTTAACCTTAAAAGTAT
TCATAATATTCAATTGAAGAACAATTACTTTTCAAGTCTCAATTTTTTCT
AACTATCCTCTCTTATTACCTTATTTGAAGTATATTTTTATAAATTCCAA
ATAAATTTTTATAAATTTAGGACCAAATAACACACATTTTATTAAAAGAA
CTAATTTTCAAATGTTAAACTTTGAATGTTTGCTGTCACCTCAATACTGT
TGTTTTTTGAATGGAATTTTCACAGAATGCAACTTGAATATTTATTTACT
AATACAAGTAATGATTTTTCAGAAGAATCAGGAAGGCATTTCGAGGCACT
CAATTTTCTTCAAGTTCTTAAAGCACTGACATTCTGACGTTCTAGTACTT
TTAAACCAAGAGTCTTTTCTTTTACTTTGATGTTATGAATGCATGAATTA
TCAAGAGATTTGCGTTTATGAGCAAAATTACGTCTAACGAGGGAGTTTGT
TAAAAAGTCAAATTAAATTGACAATGGAAATTGTCACTGAACCATAAAAA
AATTCGTTCTTACGACATAGATAGAACAACAGAAATTCAGATGTACTCAT
TCCAGCCGCGGCTTTCTTATACTATGAGTACAGCGATAAGGATTTCTCTT
TCTTAGTGTTTAATGGTTTAAAAACATAAGCTAAATTAACACGAAGTATA
AAAACTCAAACTCTCGGGTTTGTTCACTCGGGTACCTTAAAATGGATTCT
GAAAGAATTTTAAAAAGAGAGGGCTCCTTCATAAGTGTCTGGAGATTTAG
AATGTATACACTATACTTTAACCGGATAAATTTTCGCGGGGATTAAATTT
CGCGGATGACTCTATCGTGAGATAATATTTTCACGACTTTGTGCAATTTT
TGCTATTTTACCACTGACCTTTATATATCCCTGGACCAAGTTTCTCAATC
CTAGCAAAGCAAAATCTTTGATCGAAGTTTTTTGAAAAGTGGTACCCTAA
TGTCCTACTGGCGGCACTACTCGATAGCGGTGTATATACATCGAGAGCGC
TAGGTCTACTGTCCTTCAAATATTTTTGTTGATGCTCGGGTGCCAATTCC
AAAAAAAACTCCAATCAAAGATATATGGCGGATATAGCTTGGTCCAGGGA
TATAAAGGTCAGTGTATTTTACTGCCAAACTGTGCATGTTGCTTGTGAAA
TACCCATTATTAGCGTTTTTTGATGGCGGTAAACATGTTAAAAGTGGCCT
TTTGACATTTTTTGAAATTTAATTCAAAAATAATTCGCGGATAAGACTTT
TTCAAATTTTGATTGGGAGTTATTTTCGCGGATGACACCGAACAGGGAGT
TTAAGAGGCACCTAAATGTGGGTGTAAAAATCGAAATTTTATATTTAACT
TTTTTTGCAGCCAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCAGGTATT
TGTTTTGTTTGTACATTCTTAAGTGTTTTGAAGAAGGGNNTGCTGATTTA
CCGTCGTCCTCAGCTGGTCAGGATCTAATCAAATTAGAACCTTACCGTCT
CCGTCGCTGAAAAACACACATACATAAACTCGCTAATGAGTCATGAGTAC
GGTGGCATCTTTTCCAGACACATTAAATGTAGTTTGTNGAAGAAGGGTTA
TTGAGTCATGAGTACGGTGGCATCTTTTCCAGACACATTGGAAATGTAGT
TTGGACATCGACCGAAATGTAGGTGAGTTTGTATCTTATACCGTATTACT
TTAAATAAACGCCCCTCGAATAAACGCCCCTCTTTATAGGAAAAATTAAA
CGCCACCTTCAAATAAAACCCCCTTCGAATAAACACCACCCCTCTAGGAG
GGGCGTTTATTTGAATCAAATAGCAGTAAGGGAGAATCTTATTAAGGAAA
ACTTAAAAACGTGTTTATGATTTTATTCTTTCAGTATTTAAACTGATTTT
GACCCATTTTTACATCTCAAAAATGACATATTTGGGCTGATGAAAACGAA
ACGGCAGTCAAGGTTCCCTTTCACTTTATATAAATGACCTTGGTTAAAGA
TCATTTTATAAACGCCTCCTTCTTTTAAACGCCCCTCCCAGAATCCAAAA
GTAATACAGTATACGAATGGTGCCAAAAAAACACGCTTTCACGCTTTTCT
TTTAATTTCTAGGATGGTCAACCAACGAGTTATCAAAACTAACCAACCGT
CTAGCTGTAGTTTTGGTTGACCTAGTATTTCTATCTCTAAGATGTGAAAT
CGACCTTCCGAACGTTGTTAAGAAGAAGATTATCAAAAATGGCTTGAAAT
ATCCGGTGGGGCTTTCGAACGGATCCTCAAAGAAATATACGGAACTGAAT
GGAAAACTGGTTGCAAATGGAGTTTGAAGAAATGGAAATTTGTTGAAGAA
AGTGCAGACCGTCACATTAACTTGTGCGCTGCACAGGTTCATTTGGCCCT
GTTTAGAAGGCTTCGACGCAAACCATTGATTTCTTAATTTCATGAAATTT
AACGTTGCAGTACATTGGAGATTTCTATTCAAAACTCAGGCTTGTTTCTT
GACACAACAGTTAGTGGACTGACCTATATCGACGTACTAACGTTACTCCA
TGTTGTATTCGAGCCAGCAATACATTTCGTTGATGGATTTGTAAATAAAC
TGTTCATATGGTGGTATGTTGATGTGACAATATTATTATTGTTGTAGAAT
CGTTAAGTATCAGCATTTTATTAGCCTTGTCATTGTAGGCATGGACGTCT
GTATCTTTAGAAGTTTGACGTTCTAGTGAATTTCACTGATGTTGCTGGAA
AGATAATAGTTTTCTTTGGACACCTCTCCAACATTAATATAAATGTTAAA
CGTCAGGGAATGAAGAGGTTGACATTTTACATTAGCATATTCTTAAAACA
AAGATACATGTAATCTTAACTGATTGCAAGACTA

Coding sequence (CDS) from alignment at scaffold_24:162657..171740-

>TCONS_00054108 ID=TCONS_00054108|Name=TCONS_00054108|organism=Clytia hemisphaerica|type=CDS|length=7890bp|location=Sequence derived from alignment at scaffold_24:162657..171740- (Clytia hemisphaerica)
GATGGTCAACCAACGAGTTATCAAAACTAACCAACCGTCTAGCTGTAGTT
TTGGTTGACCTAGTATTTCTATCTCTAAGATGTGAAATCGACCTTCCGAA
CGTTGTTAAGAAGAAGATTATCAAAAATGGCTTGAAATATCCGGTGGGGC
TTTCGAACGGATCCTCAAAGAAATATACGGAACTGAATGGAAAACTGGTT
GCAAATGGAGTTTGACCAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCAG
GTACGTGATGTTGGGAAAGTAGCAGAATCTTTTCGTCACCATTTATCAGT
ACTAGACCGAGATATCGAGAAGGAATTTCAAAAACATTCACAAAAATCCA
TTACACTCGCCTTGAGCCGTAGAAACTGACGAGGTTGTTACAGCTGATGA
GAAACCAGCCCAAAACAAATTTGCTTTCAGTCATTTATCATTTGAAAATA
TGTTGGTGTGAGAGTGAGGTACAACATTTGGGTGAAGAATTGAGTGATGT
TTTGTTGTATCTCATCAGGTTATCTGAAAAATGTCATTGTGATCTGTCAA
ATGCTGTCAAACAACTCCTTAACAACAAATACCAAATCTTGTGGAAGGAG
GATTTACAGCATGGCTTAAAAGGTTGGGGAAGTTGGCGAGCTTAGTGAAA
TCTTAAGACAACTTCAAAGCAAGTTTGCCACAGATCGTGACTGGGACCAA
TTTCATACTCCAAGAAATCTTCTACTTGCAATGATGATGGACGCAGATGA
AAGTTGCACCCAATTTTCCAACGACACGATTGAACAGATGATGGTCAACC
AACGAGTTATCAAAACTAACCAACCGTCTAGCTGTAGTTTTGGTTGACCT
AGTATTTCTATCTCTAAGATGTGAAATCGACCTTCCGAACGTTGTTAAGA
AGAAGATTATCAAAAATGGCTTGAAATATCCGGTGGGGCTTTCGAACGGA
TCCTCAAAGAAATATACGGAACTGAATGGAAAACTGGTTGCAAATGGAGT
TTGACCAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCAGGTACGTGATGT
TGGGAAAGTAGCAGAATCTTTTCGTCACCATTTATCAGTACTAGACCGAG
ATATCGAGAAGGAATTTCAAAAACATTCACAAAAATCCATTACACTCGCC
TTGAGCCGTAGAAACTGACGAGGTTGTTACAGCTGATGAGAAACCAGCCC
AAAACAAATTTGCTTTCAGTCATTTATCATTTGAAAATATGTTGGTGTGA
GAGTGAGGTACAACATTTGGGTGAAGAATTGAGTGATGTTTTGTTGTATC
TCATCAGGTTATCTGAAAAATGTCATTGTGATCTGTCAAATGCTGTCAAA
CAACTCCTTAACAACAAATACCAAATCTTGTGGAAGGAGGATTTACAGCA
TGGCTTAAAAGGTTGGGGAAGTTGGCGAGCTTAGTGAAATCTTAAGACAA
CTTCAAAGCAAGTTTGCCACAGATCGTGACTGGGACCAATTTCATACTCC
AAGAAATCTTCTACTTGCAATGATGATGGACGCAGATGAAAGTTGCACCC
AATTTTCCAACGACACGATTGAACAGATGATGGTCAACCAACGAGTTATC
AAAACTAACCAACCGTCTAGCTGTAGTTTTGGTTGACCTAGTATTTCTAT
CTCTAAGATGTGAAATCGACCTTCCGAACGTTGTTAAGAAGAAGATTATC
AAAAATGGCTTGAAATATCCGGTGGGGCTTTCGAACGGATCCTCAAAGAA
ATATACGGAACTGAATGGAAAACTGGTTGCAAATGGAGTTTGACCAGTGG
AAAGGAGAAGTTGAAGTTAACCTCCCAGGTACGTGATGTTGGGAAAGTAG
CAGAATCTTTTCGTCACCATTTATCAGTACTAGACCGAGATATCGAGAAG
GAATTTCAAAAACATTCACAAAAATCCATTACACTCGCCTTGAGCCGTAG
AAACTGACGAGGTTGTTACAGCTGATGAGAAACCAGCCCAAAACAAATTT
GCTTTCAGTCATTTATCATTTGAAAATATGTTGGTGTGAGAGTGAGGTAC
AACATTTGGGTGAAGAATTGAGTGATGTTTTGTTGTATCTCATCAGGTTA
TCTGAAAAATGTCATTGTGATCTGTCAAATGCTGTCAAACAACTCCTTAA
CAACAAATACCAAATCTTGTGGAAGGAGGATTTACAGCATGGCTTAAAAG
GTTGGGGAAGTTGGCGAGCTTAGTGAAATCTTAAGACAACTTCAAAGCAA
GTTTGCCACAGATCGTGACTGGGACCAATTTCATACTCCAAGAAATCTTC
TACTTGCAATGATGATGGACGCAGATGAAAGTTGCACCCAATTTTCCAAC
GACACGATTGAACAGATGATGGTCAACCAACGAGTTATCAAAACTAACCA
ACCGTCTAGCTGTAGTTTTGGTTGACCTAGTATTTCTATCTCTAAGATGT
GAAATCGACCTTCCGAACGTTGTTAAGAAGAAGATTATCAAAAATGGCTT
GAAATATCCGGTGGGGCTTTCGAACGGATCCTCAAAGAAATATACGGAAC
TGAATGGAAAACTGGTTGCAAATGGAGTTTGACCAGTGGAAAGGAGAAGT
TGAAGTTAACCTCCCAGGTACGTGATGTTGGGAAAGTAGCAGAATCTTTT
CGTCACCATTTATCAGTACTAGACCGAGATATCGAGAAGGAATTTCAAAA
ACATTCACAAAAATCCATTACACTCGCCTTGAGCCGTAGAAACTGACGAG
GTTGTTACAGCTGATGAGAAACCAGCCCAAAACAAATTTGCTTTCAGTCA
TTTATCATTTGAAAATATGTTGGTGTGAGAGTGAGGTACAACATTTGGGT
GAAGAATTGAGTGATGTTTTGTTGTATCTCATCAGGTTATCTGAAAAATG
TCATTGTGATCTGTCAAATGCTGTCAAACAACTCCTTAACAACAAATACC
AAATCTTGTGGAAGGAGGATTTACAGCATGGCTTAAAAGGTTGGGGAAGT
TGGCGAGCTTAGTGAAATCTTAAGACAACTTCAAAGCAAGTTTGCCACAG
ATCGTGACTGGGACCAATTTCATACTCCAAGAAATCTTCTACTTGCAATG
ATGATGGACGCAGATGAAAGTTGCACCCAATTTTCCAACGACACGATTGA
ACAGATGATGGTCAACCAACGAGTTATCAAAACTAACCAACCGTCTAGCT
GTAGTTTTGGTTGACCTAGTATTTCTATCTCTAAGATGTGAAATCGACCT
TCCGAACGTTGTTAAGAAGAAGATTATCAAAAATGGCTTGAAATATCCGG
TGGGGCTTTCGAACGGATCCTCAAAGAAATATACGGAACTGAATGGAAAA
CTGGTTGCAAATGGAGTTTGACCAGTGGAAAGGAGAAGTTGAAGTTAACC
TCCCAGGTACGTGATGTTGGGAAAGTAGCAGAATCTTTTCGTCACCATTT
ATCAGTACTAGACCGAGATATCGAGAAGGAATTTCAAAAACATTCACAAA
AATCCATTACACTCGCCTTGAGCCGTAGAAACTGACGAGGTTGTTACAGC
TGATGAGAAACCAGCCCAAAACAAATTTGCTTTCAGTCATTTATCATTTG
AAAATATGTTGGTGTGAGAGTGAGGTACAACATTTGGGTGAAGAATTGAG
TGATGTTTTGTTGTATCTCATCAGGTTATCTGAAAAATGTCATTGTGATC
TGTCAAATGCTGTCAAACAACTCCTTAACAACAAATACCAAATCTTGTGG
AAGGAGGATTTACAGCATGGCTTAAAAGGTTGGGGAAGTTGGCGAGCTTA
GTGAAATCTTAAGACAACTTCAAAGCAAGTTTGCCACAGATCGTGACTGG
GACCAATTTCATACTCCAAGAAATCTTCTACTTGCAATGATGATGGACGC
AGATGAAAGTTGCACCCAATTTTCCAACGACACGATTGAACAGATGATGG
TCAACCAACGAGTTATCAAAACTAACCAACCGTCTAGCTGTAGTTTTGGT
TGACCTAGTATTTCTATCTCTAAGATGTGAAATCGACCTTCCGAACGTTG
TTAAGAAGAAGATTATCAAAAATGGCTTGAAATATCCGGTGGGGCTTTCG
AACGGATCCTCAAAGAAATATACGGAACTGAATGGAAAACTGGTTGCAAA
TGGAGTTTGACCAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCAGGTACG
TGATGTTGGGAAAGTAGCAGAATCTTTTCGTCACCATTTATCAGTACTAG
ACCGAGATATCGAGAAGGAATTTCAAAAACATTCACAAAAATCCATTACA
CTCGCCTTGAGCCGTAGAAACTGACGAGGTTGTTACAGCTGATGAGAAAC
CAGCCCAAAACAAATTTGCTTTCAGTCATTTATCATTTGAAAATATGTTG
GTGTGAGAGTGAGGTACAACATTTGGGTGAAGAATTGAGTGATGTTTTGT
TGTATCTCATCAGGTTATCTGAAAAATGTCATTGTGATCTGTCAAATGCT
GTCAAACAACTCCTTAACAACAAATACCAAATCTTGTGGAAGGAGGATTT
ACAGCATGGCTTAAAAGGTTGGGGAAGTTGGCGAGCTTAGTGAAATCTTA
AGACAACTTCAAAGCAAGTTTGCCACAGATCGTGACTGGGACCAATTTCA
TACTCCAAGAAATCTTCTACTTGCAATGATGATGGACGCAGATGAAAGTT
GCACCCAATTTTCCAACGACACGATTGAACAGATGATGGTCAACCAACGA
GTTATCAAAACTAACCAACCGTCTAGCTGTAGTTTTGGTTGACCTAGTAT
TTCTATCTCTAAGATGTGAAATCGACCTTCCGAACGTTGTTAAGAAGAAG
ATTATCAAAAATGGCTTGAAATATCCGGTGGGGCTTTCGAACGGATCCTC
AAAGAAATATACGGAACTGAATGGAAAACTGGTTGCAAATGGAGTTTGAC
CAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCAGGTACGTGATGTTGGGA
AAGTAGCAGAATCTTTTCGTCACCATTTATCAGTACTAGACCGAGATATC
GAGAAGGAATTTCAAAAACATTCACAAAAATCCATTACACTCGCCTTGAG
CCGTAGAAACTGACGAGGTTGTTACAGCTGATGAGAAACCAGCCCAAAAC
AAATTTGCTTTCAGTCATTTATCATTTGAAAATATGTTGGTGTGAGAGTG
AGGTACAACATTTGGGTGAAGAATTGAGTGATGTTTTGTTGTATCTCATC
AGGTTATCTGAAAAATGTCATTGTGATCTGTCAAATGCTGTCAAACAACT
CCTTAACAACAAATACCAAATCTTGTGGAAGGAGGATTTACAGCATGGCT
TAAAAGGTTGGGGAAGTTGGCGAGCTTAGTGAAATCTTAAGACAACTTCA
AAGCAAGTTTGCCACAGATCGTGACTGGGACCAATTTCATACTCCAAGAA
ATCTTCTACTTGCAATGATGATGGACGCAGATGAAAGTTGCACCCAATTT
TCCAACGACACGATTGAACAGATGATGGTCAACCAACGAGTTATCAAAAC
TAACCAACCGTCTAGCTGTAGTTTTGGTTGACCTAGTATTTCTATCTCTA
AGATGTGAAATCGACCTTCCGAACGTTGTTAAGAAGAAGATTATCAAAAA
TGGCTTGAAATATCCGGTGGGGCTTTCGAACGGATCCTCAAAGAAATATA
CGGAACTGAATGGAAAACTGGTTGCAAATGGAGTTTGACCAGTGGAAAGG
AGAAGTTGAAGTTAACCTCCCAGGTACGTGATGTTGGGAAAGTAGCAGAA
TCTTTTCGTCACCATTTATCAGTACTAGACCGAGATATCGAGAAGGAATT
TCAAAAACATTCACAAAAATCCATTACACTCGCCTTGAGCCGTAGAAACT
GACGAGGTTGTTACAGCTGATGAGAAACCAGCCCAAAACAAATTTGCTTT
CAGTCATTTATCATTTGAAAATATGTTGGTGTGAGAGTGAGGTACAACAT
TTGGGTGAAGAATTGAGTGATGTTTTGTTGTATCTCATCAGGTTATCTGA
AAAATGTCATTGTGATCTGTCAAATGCTGTCAAACAACTCCTTAACAACA
AATACCAAATCTTGTGGAAGGAGGATTTACAGCATGGCTTAAAAGGTTGG
GGAAGTTGGCGAGCTTAGTGAAATCTTAAGACAACTTCAAAGCAAGTTTG
CCACAGATCGTGACTGGGACCAATTTCATACTCCAAGAAATCTTCTACTT
GCAATGATGATGGACGCAGATGAAAGTTGCACCCAATTTTCCAACGACAC
GATTGAACAGATGATGGTCAACCAACGAGTTATCAAAACTAACCAACCGT
CTAGCTGTAGTTTTGGTTGACCTAGTATTTCTATCTCTAAGATGTGAAAT
CGACCTTCCGAACGTTGTTAAGAAGAAGATTATCAAAAATGGCTTGAAAT
ATCCGGTGGGGCTTTCGAACGGATCCTCAAAGAAATATACGGAACTGAAT
GGAAAACTGGTTGCAAATGGAGTTTGACCAGTGGAAAGGAGAAGTTGAAG
TTAACCTCCCAGGTACGTGATGTTGGGAAAGTAGCAGAATCTTTTCGTCA
CCATTTATCAGTACTAGACCGAGATATCGAGAAGGAATTTCAAAAACATT
CACAAAAATCCATTACACTCGCCTTGAGCCGTAGAAACTGACGAGGTTGT
TACAGCTGATGAGAAACCAGCCCAAAACAAATTTGCTTTCAGTCATTTAT
CATTTGAAAATATGTTGGTGTGAGAGTGAGGTACAACATTTGGGTGAAGA
ATTGAGTGATGTTTTGTTGTATCTCATCAGGTTATCTGAAAAATGTCATT
GTGATCTGTCAAATGCTGTCAAACAACTCCTTAACAACAAATACCAAATC
TTGTGGAAGGAGGATTTACAGCATGGCTTAAAAGGTTGGGGAAGTTGGCG
AGCTTAGTGAAATCTTAAGACAACTTCAAAGCAAGTTTGCCACAGATCGT
GACTGGGACCAATTTCATACTCCAAGAAATCTTCTACTTGCAATGATGAT
GGACGCAGATGAAAGTTGCACCCAATTTTCCAACGACACGATTGAACAGA
TGATGGTCAACCAACGAGTTATCAAAACTAACCAACCGTCTAGCTGTAGT
TTTGGTTGACCTAGTATTTCTATCTCTAAGATGTGAAATCGACCTTCCGA
ACGTTGTTAAGAAGAAGATTATCAAAAATGGCTTGAAATATCCGGTGGGG
CTTTCGAACGGATCCTCAAAGAAATATACGGAACTGAATGGAAAACTGGT
TGCAAATGGAGTTTGACCAGTGGAAAGGAGAAGTTGAAGTTAACCTCCCA
GGTACGTGATGTTGGGAAAGTAGCAGAATCTTTTCGTCACCATTTATCAG
TACTAGACCGAGATATCGAGAAGGAATTTCAAAAACATTCACAAAAATCC
ATTACACTCGCCTTGAGCCGTAGAAACTGACGAGGTTGTTACAGCTGATG
AGAAACCAGCCCAAAACAAATTTGCTTTCAGTCATTTATCATTTGAAAAT
ATGTTGGTGTGAGAGTGAGGTACAACATTTGGGTGAAGAATTGAGTGATG
TTTTGTTGTATCTCATCAGGTTATCTGAAAAATGTCATTGTGATCTGTCA
AATGCTGTCAAACAACTCCTTAACAACAAATACCAAATCTTGTGGAAGGA
GGATTTACAGCATGGCTTAAAAGGTTGGGGAAGTTGGCGAGCTTAGTGAA
ATCTTAAGACAACTTCAAAGCAAGTTTGCCACAGATCGTGACTGGGACCA
ATTTCATACTCCAAGAAATCTTCTACTTGCAATGATGATGGACGCAGATG
AAAGTTGCACCCAATTTTCCAACGACACGATTGAACAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034147XLOC_034147Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054108-proteinTCONS_00054108-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054108-exon-scaffold_24-1575043694:171643..171740TCONS_00054108-exon-scaffold_24-1575043694:171643..171740Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:171281..171357TCONS_00054108-exon-scaffold_24-1575043694:171281..171357Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:170996..171074TCONS_00054108-exon-scaffold_24-1575043694:170996..171074Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:170502..170533TCONS_00054108-exon-scaffold_24-1575043694:170502..170533Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:168384..168418TCONS_00054108-exon-scaffold_24-1575043694:168384..168418Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:167908..168043TCONS_00054108-exon-scaffold_24-1575043694:167908..168043Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:166578..166664TCONS_00054108-exon-scaffold_24-1575043694:166578..166664Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:166353..166434TCONS_00054108-exon-scaffold_24-1575043694:166353..166434Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:165718..165749TCONS_00054108-exon-scaffold_24-1575043694:165718..165749Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:164146..164180TCONS_00054108-exon-scaffold_24-1575043694:164146..164180Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1575043694:162657..163428TCONS_00054108-exon-scaffold_24-1575043694:162657..163428Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:171643..171740TCONS_00054108-exon-scaffold_24-1510915933:171643..171740Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:171281..171357TCONS_00054108-exon-scaffold_24-1510915933:171281..171357Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:170996..171074TCONS_00054108-exon-scaffold_24-1510915933:170996..171074Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:170502..170533TCONS_00054108-exon-scaffold_24-1510915933:170502..170533Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:168384..168418TCONS_00054108-exon-scaffold_24-1510915933:168384..168418Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:167908..168043TCONS_00054108-exon-scaffold_24-1510915933:167908..168043Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:166578..166664TCONS_00054108-exon-scaffold_24-1510915933:166578..166664Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:166353..166434TCONS_00054108-exon-scaffold_24-1510915933:166353..166434Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:165718..165749TCONS_00054108-exon-scaffold_24-1510915933:165718..165749Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:164146..164180TCONS_00054108-exon-scaffold_24-1510915933:164146..164180Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1510915933:162657..163428TCONS_00054108-exon-scaffold_24-1510915933:162657..163428Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:171643..171740TCONS_00054108-exon-scaffold_24-1491911889:171643..171740Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:171281..171357TCONS_00054108-exon-scaffold_24-1491911889:171281..171357Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:170996..171074TCONS_00054108-exon-scaffold_24-1491911889:170996..171074Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:170502..170533TCONS_00054108-exon-scaffold_24-1491911889:170502..170533Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:168384..168418TCONS_00054108-exon-scaffold_24-1491911889:168384..168418Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:167908..168043TCONS_00054108-exon-scaffold_24-1491911889:167908..168043Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:166578..166664TCONS_00054108-exon-scaffold_24-1491911889:166578..166664Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:166353..166434TCONS_00054108-exon-scaffold_24-1491911889:166353..166434Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:165718..165749TCONS_00054108-exon-scaffold_24-1491911889:165718..165749Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:164146..164180TCONS_00054108-exon-scaffold_24-1491911889:164146..164180Clytia hemisphaericaexon
TCONS_00054108-exon-scaffold_24-1491911889:162657..163428TCONS_00054108-exon-scaffold_24-1491911889:162657..163428Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:162657..171740 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
12.4838	12.2592	9.05098	7.72854	4.99007	3.91312	7.08152	8.02355	5.48475	4.98275	4.42908	4.47845	5.26006	5.36238	7.3041	8.8976	9.7374	9.14538	4.05138	3.11066	6.88223	6.02643	10.3996	10.4694	4.45809	5.27792	3.56332	3.92657	7.01554	8.65635
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004518MazG_cat
IPR025984DCTPP
IPR009039EAR
Vocabulary: Molecular Function
TermDefinition
GO:0047429nucleoside-triphosphate diphosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0009143nucleoside triphosphate catabolic process
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009143 nucleoside triphosphate catabolic process
molecular_function GO:0047429 nucleoside-triphosphate diphosphatase activity
Blast
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BLAST of TCONS_00054108 vs. Swiss-Prot (Human)
Match: DCTP1 (dCTP pyrophosphatase 1 OS=Homo sapiens GN=DCTPP1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.248e-29
Identity = 52/89 (58.43%), Postives = 67/89 (75.28%), Query Frame = 3 
Query:  162 TIEQIRQLQSKFATDRDWDQFHTPRNLLLAMVGEVGELSEIFLWKEDLQHGLKGWCESEVQHLGEELSDVLLYLIRLSEKCHCDLSNAV 428
            T+E IR+L ++FA +RDW+QFH PRNLLLA+VGEVGEL+E+F WK D + G +GW   E   L EELSDVL+YL+ L+ +C  DL  AV
Sbjct:   30 TLEDIRRLHAEFAAERDWEQFHQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRERAALQEELSDVLIYLVALAARCRVDLPLAV 118

HSP 2 Score: 91.6633 bits (226), Expect = 2.761e-21
Identity = 55/129 (42.64%), Postives = 76/129 (58.91%), Query Frame = 3 
Query:  501 AQNKFAFS-HLSFENIR--HHLSVLDRDIEKEFQKHSQKSITLALVRDVGKVAESFQWKGEVEVNLPGWSTNELSKLTNRLAVVLVDLVFLSLRCEIDLPNVVKKKIIKNGLKYPVGLSNGSSKKYTEL 878
            A  +F+FS   + E+IR  H     +RD E   Q H  +++ LALV +VG++AE FQWK + E    GWS  E + L   L+ VL+ LV L+ RC +DLP  V  K+  N  +YP  L+  SS+KYTEL
Sbjct:   19 APGRFSFSPEPTLEDIRRLHAEFAAERDWE---QFHQPRNLLLALVGEVGELAELFQWKTDGEPGPQGWSPRERAALQEELSDVLIYLVALAARCRVDLPLAVLSKMDINRRRYPAHLARSSSRKYTEL 144
The following BLAST results are available for this feature:
BLAST of TCONS_00054108 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DCTP11.248e-2958.43dCTP pyrophosphatase 1 OS=Homo sapiens GN=DCTPP1 P... [more]
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