TCONS_00053952 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053952
Unique NameTCONS_00053952
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length974

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053952 ID=TCONS_00053952|Name=TCONS_00053952|organism=Clytia hemisphaerica|type=transcript|length=974bp
ACAACGACATCATCACCGACGTCAAAACCTTCGACAACCCAACATCCTTC
GACAATACCTCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTGATGT
CAATCTATTCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGCAGGG
TATTGTGTCAGGTTAATATCAAAGGATCCTGTTTGTTACCAAGCGAAGGA
TGACAAACCTGGTGGATTTGAAGTACCATACAGTGGAGAGATCGTTATGG
TGATCCTCAAACATTTTTCTGGATCCATTTCATGTTACCCTGGTTATAAA
AGTTATTGGTTTTGCAAGAAACTTGGTACGGGAGCACACATGAGCCTTTT
GCTAACTAATAAAGCAGATCAGAAACTCGATTTCGACTCCGTGTTTATTC
GCGATATAAATCCAGAAATATTTGCATTCAAAAACGAATTGGGTTATGAA
GTCACAGAAGGTGATGAATTACGAATCTGGTTTTATGAAGATCGAGAAAA
TCATTTGGAAGATGATAACAGTGGAGAGCATTGTGTTTATGTTCATGTCG
TATATAAACGTGATACGATGACGGGTACAAGTGTGCTTACAAATGTGGTT
ACAAATTTGGTTACATAAATGAAATGGTTTTTAACGAGGGATAaattact
tgaaaaaaggtgtacgatactttttgacttttcgaattttcatttgactt
tttgacttttttttgactttttgtccaaaaacgccaaccgacaataaatt
ttgctccacccatcctCCCATTCAAGAACACTTTTAGATATTTTCtagac
tttttttttacttttatttgactttttgacttttttctaagaatttttca
ctttttctttgactttttgagtttttctttgactttttgtagaggtgtac
GATAGTTTTTGAGTGGTTTACCCGTCGGTTTTTAGTTATAATTAAAGTTC
AGGTACCACGACATCAACAAGTAT
Run BLAST on NCBI

protein sequence of TCONS_00053952-protein

>TCONS_00053952-protein ID=TCONS_00053952-protein|Name=TCONS_00053952-protein|organism=Clytia hemisphaerica|type=polypeptide|length=205bp
TTTSSPTSKPSTTQHPSTIPPPSELVNLLTRLMSIYSFDPINDDLFCDAG
YCVRLISKDPVCYQAKDDKPGGFEVPYSGEIVMVILKHFSGSISCYPGYK
SYWFCKKLGTGAHMSLLLTNKADQKLDFDSVFIRDINPEIFAFKNELGYE
VTEGDELRIWFYEDRENHLEDDNSGEHCVYVHVVYKRDTMTGTSVLTNVV
TNLVT
Run BLAST on NCBI

transcript from alignment at scaffold_237:118155..126033-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053952 ID=TCONS_00053952|Name=TCONS_00053952|organism=Clytia hemisphaerica|type=transcript|length=7879bp|location=Sequence derived from alignment at scaffold_237:118155..126033- (Clytia hemisphaerica)
ACAACGACATCATCACCGACATCGTCACCGACAACGACATCGTCACCGAC
AACGACATCAACGTCAAAACCTTCGACAACCCAACATCCTTCGACAATAC
ATCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTGATGTCAATCTAT
TCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGCAGGTGGGTTTAA
CTTTTTGGGTACACGTTTTCTTTCATAAGAGCAAACTATATAAGAACATA
AGGCTTCGATGGCCAAAATCTTAAAAACCTGTTAAGAACATTTGAAGGCT
TCGCGGACTCTAAAACACCCGATTTCTTAAAAACTGGACAAAAATACTCA
AAAATTGGCACAAATAAAAGAACATTTTAATTTTGGGTGGGGGGGGGTCA
ATGTAAAGTNTACCACGAAAGTCGCAGAAACAACTTCACCAGCTACAACA
TCAACGACACCCAAAACGTCTTCAACAACACCAAAAACGTCTTCAGCAAC
ACCTAACAAGATTTCAGAACAAGCTACAACAGCAAAATCGACCACGACGT
CCACAACAACAACCCATACACCGCCCCAAACGTCTTCGAATCCACCCACA
ACGTTTACAACAACTACCACTCAAACGACTTCGACAAGCTCGCAAATTAC
AACAACTGTTCCCGATACTACGAAAGCAATACCAACTGCAGAAGCAACAA
CAAAAGCGAAAACTATCCAACAGCAAACGACAACATCTCGGACAACAATC
CCACAGTCAACAACAGCATCTTCGACAACCATCAAACAACCAAAGACAAC
ATCTCTGACAACGACATCCTCGCCGACATCGTCACCAACAACGACATCAT
CACCGACAACGACATCGTTACCGACANTACGTCATCACCGACAACGAAAT
CATTACCGACAACGACATCACCACCGACAACGACATCATCACCGACAACG
ACATCATCACCGACAACGACATCATCACCAACAACGACATCATCACCGAC
AACGACATCATCACCGACATCGACATCATCACCGACAACGACATCATCAC
CGACAACGACATCAACGTCAAAACCTTCGACAACCCAACATCCTTCGACA
ATACCTCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTGATGTCAAT
CTATTCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGCAGGTGGGT
TTAACTTTTTGGGTACACGTTTTCTTTTATAAGAGCAAACTATATAAGAA
CATAAGGCTTCGATGGCCAAAATCTTAAAAACCTGTTAAGAACATTTGAA
GGCTTCGCGGACTCTAAAACACCCGATTTCTTAAAAACTGGACAAAAATA
CTCAAAAATTGGCACAAATAAAAGAACATTTTAATTTTGGGTGGGGGGGG
GTCAATGTAAAGTGATTCTGGGGTGATTTTCCCAAAAACCCAAAAAAGGT
TTTGGCACTTTTTGGCACTTTTTCAGGAAAATTTCATAAAATGGTATTGG
GTGAGGGTGAGTGAACCCTCCCCTATCAATTAAGCACAAGAGTACTAGGT
TTCTGAGGTTACTCTTAGGTGTCAAATAAACGGGGGAGTTCGAATAAATG
GGGGGGGGGGGTGGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGG
GGGGTTGGAAAAAAATCGAAAAATTAACAAGCGAGGGGGCCCGTTTATTT
GGCACCTAAGAGTAAAGCCTTTAAACCTTAGAGTAGTTTCTCCTCAAATT
ATTCTCGCAACTTTGCTTGTTTTAAGTTCTTTAAAATAATGATCCTTTGA
GGACATAGATTTTCTCTTTCGTGATACACACGCTTTTTTAAGAATAGTGT
ACTTTGGATGAGGATCAAATTATATTATTAAGAAATTGCCAAAATTGAGG
GTGAAATATTCTTCACGTATTCTTACTTTTTTAGACTTGACTTTTATACA
AATATGAGAAATGATCAATTTGAGACTTTTTTTGAGTACACATTAAAATC
ATATTTCTGCCTCGAACTTTCAATTTAAGTCTAACAAAAGAAGCTAACGA
AATACAAAATTGACACGGATATGTGAAGCAAGATTGGTCAGAAAGAAGAA
AAGAAAAACATTTCTTGCTTATATCAGCATAATATAACAATAGCAAGACA
CTGTCCTGATATGAAATATGTGTCTGATATGAAACGGAAATAATTATGTA
AAAAAAACCTTTATTAAAGTTATGTGTTTTAACTCGATGTGCTCATTTAT
TCTTCTAGGGTATTGTGTCAGGTTAATATCAAAGGATCCTGTTTGTTACC
AAGCGAAGGATGACAAACCTGGTGGATTTGAAGTACCATACAGTGGAGAG
ATCGTTATGGTGATCCTCAAACATTTTTCTGGATCCATTTCATGTTACCC
TGGTACAAATTATTTCATTACTTAGGGACCACCAAAGACTAGGTTGCTCA
TTTCCTACTGCCTCGTTTGCTATGGNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATTGGTAATAGCTCCTG
AAATAATAGAGCTTTTGTCATGAAATTTTCTGTAAATTCCTAACTTTTAT
TTAGCTTCAAAATAAATAAAAAATTGACACCTAAAAATTTTCACACCTTG
AACATGATGACATTTCTGATAGTAAGGTGTCACAAAAATTGACACTTTTC
CAATACAAATTTATTTTCTATGTCAAATTCATCGTTCAAACCGTAATTTA
TTAAATATTTAGGATAAAATAAGCATTTTAAACCTTTGTTAGAATACAAA
AGCTATTTTTGTGAACAAAGGAAATTTTCGGATTTTGCTCACTTTGGGCA
TGATGAGTGACGCCATCAAAAAAATGTTTGTCAAAAGTTACCTTATGTGA
CAAGAATCTTGTGTGTCAAATTTCATCCAAAACGACCCACTAGATCAAAA
GTTAAGGGGTGGTACAGGAAAAGTTTTTTAGTTTTGAACCACCCCTAAAA
GCCTAGTATGAATAGGGTTAAAGTAAAATTATTTCTCTCATTTAAAAATC
ACATAAATAAGGTTGTCCGTAGGAGTAAAAAAAACAGCAAAAAATGGAGT
TTTTCGACCACTATTTATCTTCAATTTCTAAAAATTCTTTGAGTTATTTT
TCCCAAAGCTTAAAGTACTCTGAATTATCTTTTAAACGTCATATGATTTG
CTAGATTTGGAGGATTAATCGGAAAATAAAAAGCAAAACAAACACTGGGC
GAAATAAGAGATTTCCAATCCTGGAAATATCTTGAAAATATGATATTTCC
ATTCACTTTTGTAAATATGGAAATATGACTTTTCTATATTTCCAAAGTTG
GAAATATTTTGAAAATATGATATTTCAATGAATTTCAGAATTGGGAACAT
CATGAAATATGATATTTCCACAGCTTTCCAAGATATTTCCAGGATTGGAA
ATCTCTTATTTCAACCAGTGAAAGATTAGTACACATTTGAGGCGAATGAA
CTATGAATCTAAATTTAAATGAAATAGTTTTAACGGCCATCAAATNGGTA
CTATGGTTGCAAGCTGACGAGGGGTGCCGCCCATCTTTCGACCCTCGGAC
CCTTACCGAGAGGAGAAAACAAAGGAAAGTTTTGTGAATTTTACGACCCT
TACCGGGACAAATTTGACGAATTTTGACCAAATTTCGATCTTTCAGGGGG
TAAAAAGTTGAAATTCTCCTATTTCTCCTACCCTTAGTGGGACTGAAATT
TGATTTTCTGATTTTTCCGACCCTTAGCGGGACTTTGGAAATCCAAAAAA
GGTACCCTTAAGGGCGGCACATACCGTACCCTCCATTTGTCTAAGTTGTC
TAAGTAGCCCGCCCCCGCGGGCGAGAAAAAAAATTAGCGAAAACCTTTTT
CTATAAATCTGAAAAATTCTGATTCGCGAAACAGAAGAATTATATCAAAT
TAATATTAAATACTTAATGGGGATGGATATCAAATATTAAGATCAGATTT
AAGGTAAATTTGTCCTTTTTAGGCCAATATTTGTTTAAAATTCTATTTTT
CGAAATCTAAAAATCCCGACAGTTTATGCTCGTGAGAGTAAATGTCTTCA
ATTTAGCAAGTTTTTCGAACGACATAAAATATATACGCCTAAACTAATAT
AGTTGACTCTATCTAATTCGATCTTCATGGGGCCAAAAACTTTCCTTCGA
ATTAGAGAAAAATTCAAATTACAGAGAGTAAATTTAACCACTTTCCACCT
GAGGGAACCAATATTTTAGTTCAAATTACAGAAAGATTGCAACCTTTTTC
TACCATTTCTAGGTTATAAAAGTTATTGGTTTTGCAAGAAACTTGGTACG
GGAGCACACATGAGCCTTTTGCTAACTAATAAAGCAGATCAGAAACTCGA
TTTCGACTCCGTGTTTATTCGTAAGTTTTAGCAAATTATTTTCTTACTGA
TTATAATCCCTGGGTCATTAGATTAAATTCGTCTATACTTCGCAGGCAGT
AATATAGGCGCTTTAAAATAATATGAGAGTTTGTGTTGAACTACAATCAT
GGTCGAAACAATTTCAGAATTTAGTGTTTTTCAGAATTTAAAGTTCGGGC
GACAATTGTTGTTTTAGCACTTCCACTTTCTTTCATCGAATATTCCGATT
TTGGAGGGGTTCGGTGGCTTCTAGGCTATATATTCCAAGCCTTATTGGAG
CTAATTTGAGCTTTTAAATCCTGAGATCCTAAGGTCTTAAGTCTTAAAAC
TTAGAGTTAAAACTCTACTTTCCAACTGTAGTTTAACCCGCTTAAAAATC
TTTTGTGGTGTTATTTGAAATTTCGCCGGGAAATCTCCTTTGTCTCAAAT
GTTTTGTCCATGATTGTATGGTTTTTAGTTTTCGCAGCATACCCTACTTA
GGCCCGTCTAAGGCAGAACAAAGGGAGGATGGTGGGTTGGGAAAATCTTC
AAATTTTAATAAATTGTGGGTCCTAATTGTTCCTCTAAATACCTCCAAAA
TAAGGTAATTATAGACTAAAACTTGGCTATTTAGCGCAAAAGAAGACAGC
TGAAAATATTTTCAAACATTAATTGCCGGGGGTCCTAATCATAGATTTAT
AAAGCCCCGAAGGGCTAGATGTCGTGCTTTCGCTTAAAAGTGTGCCAAGG
TTAAGTAGAAAATCCTACCTAGGTCACGTGACATTACAATAGACTTTCAG
CGCTTGACCAATAAGAAGCTTCGCGGGTTTTCGAAAGCAATAGCAGCAAT
CTTTTTTGAGATTTACTTTTTTCTTCAAAGTAGTATAAAATTGTCTCTGT
AATTCGAAAAAAATCCCTGGTCCCTTGAAGATCGAATTAGAGAGAGAAAG
TCAACTCTAGTTGTTTTTTTCTTAATGATTTTGTAAAAGCTCGTTACAGT
TGAAGCACTATTTCAAACACTTGCAAACTTGATATTTTAGGCGATATAAA
TCCAGAAATATTTGCATTCAAAAACGAATTGGGTTATGAAGTCACAGAAG
GTGATGAATTACGAATCTGGTTTTATGAAGATCGAGAAAATCATTTGGAA
GATGATAACAGTGGAGAGCATTGTGTNAGATCATCTAAAATTAACAATTT
TCTTTTGAAATTTTAGGAGCTTTCCTCCTGATATTTTGAGGGAGACATTT
CAGATCTTCGCAATTTTGGAGCCTGTAATAGAGACTGATTTGCTTTTTTA
TAGATTTTGCACCCCCTTTGTGAGGCTTGTGAGGGTTTTGATGAATTCTC
CCGTGCAAAATGATTTCATAGTTATCACACATTATTGTTTTCAGTTTTTA
GATGACATAACTATCAAGAAAGAAAGAAACAACAATCTTTCATTTTTGTA
CAACTCTAAGTTCATGTCTTTAGATAATGATCAGCTACTGAATAGCTTTT
ATCAAAATGAAATACAGTAAACTCTCTCTAATTCGAACCTCTATTATTCA
AATCTTTCTATAATTCGAACTAAAATTTTAGTCTCAACTTCAAAGTAGTA
TAAAATGGTCTCTGTAATTCGAAGAAAATCCCTGGTCCCTTGAAGATCGA
ATTAGAGAGAGAAAGTCAACTCTAGTTGTTTTTTTCTTAATGATTTTGTA
AAAGCTCGTTACAGTTGAAGCACTATTTCAAACACTTGCAAACTTGATAT
TTTAGGCGATATAAATCCAGAAATATTTGCATTCAAAAACGAATTGGGTT
ATGAAGTCACAGAAGGTGATGAATTACGAATCTGGTTTTATGAAGATCGA
GAAAATCATTTGGAAGATGATAACAGTGGAGAGCATTGTGTTTATGTTCA
TGTCGTATATAAACGTGATACGATGACGGGTACAAGTGTGCTTACAAATG
TGGTTACAAATTTGGTTACATAAATGAAATGGTTTTTAACGAGGGATAAA
TTACTTGAAAAAAGGTGTACGATACTTTTTGACTTTTCGAATTTTCATTT
GACTTTTTGACTTTTTTTTGACTTTTTGTCCAAAAACGCCAACCGACAAT
AAATTTTGCTCCACCCATCCTCCCATTCAAGAACACTTTTAGATATTTTC
TAGACTTTTTTTTTACTTTTATTTGACTTTTTGACTTTTTTCTAAGAATT
TTTCACTTTTTCTTTGACTTTTTGAGTTTTTCTTTGACTTTTTGTAGAGG
TGTACGATAGTTTTTGAGTGGTTTACCCGTCGGTTTTTAGTTATAATTAA
AGTTCAGGTACCACGACATCAACAAGTAT

Coding sequence (CDS) from alignment at scaffold_237:118155..126033-

>TCONS_00053952 ID=TCONS_00053952|Name=TCONS_00053952|organism=Clytia hemisphaerica|type=CDS|length=3090bp|location=Sequence derived from alignment at scaffold_237:118155..126033- (Clytia hemisphaerica)
GCGATATAAATCCAGAAATATTTGCATTCAAAAACGAATTGGGTTATGAA
GTCACAGAAGGTGATGAATTACGAATCTGGTTTTATGAAGATCGAGAAAA
TCATTTGGAAGATGATAACAGTGGAGAGCATTGTGTTTATGTTCATGTCG
TATATAAACGTGATACGATGACGGGTACAAGTGTGCTTACAAATGTGGTT
ACAAATTTGGTTACATAAGTTATAAAAGTTATTGGTTTTGCAAGAAACTT
GGTACGGGAGCACACATGAGCCTTTTGCTAACTAATAAAGCAGATCAGAA
ACTCGATTTCGACTCCGTGTTTATTCGGTATTGTGTCAGGTTAATATCAA
AGGATCCTGTTTGTTACCAAGCGAAGGATGACAAACCTGGTGGATTTGAA
GTACCATACAGTGGAGAGATCGTTATGGTGATCCTCAAACATTTTTCTGG
ATCCATTTCATGTTACCCTGGTCAAAACCTTCGACAACCCAACATCCTTC
GACAATACCTCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTGATGT
CAATCTATTCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGCAGAC
AACGACATCATCACCGACGCGATATAAATCCAGAAATATTTGCATTCAAA
AACGAATTGGGTTATGAAGTCACAGAAGGTGATGAATTACGAATCTGGTT
TTATGAAGATCGAGAAAATCATTTGGAAGATGATAACAGTGGAGAGCATT
GTGTTTATGTTCATGTCGTATATAAACGTGATACGATGACGGGTACAAGT
GTGCTTACAAATGTGGTTACAAATTTGGTTACATAAGTTATAAAAGTTAT
TGGTTTTGCAAGAAACTTGGTACGGGAGCACACATGAGCCTTTTGCTAAC
TAATAAAGCAGATCAGAAACTCGATTTCGACTCCGTGTTTATTCGGTATT
GTGTCAGGTTAATATCAAAGGATCCTGTTTGTTACCAAGCGAAGGATGAC
AAACCTGGTGGATTTGAAGTACCATACAGTGGAGAGATCGTTATGGTGAT
CCTCAAACATTTTTCTGGATCCATTTCATGTTACCCTGGTCAAAACCTTC
GACAACCCAACATCCTTCGACAATACCTCCGCCATCAGAACTGGTCAACC
TTTTAACGAGATTGATGTCAATCTATTCCTTTGATCCAATAAATGATGAT
CTTTTTTGTGACGCAGACAACGACATCATCACCGACGCGATATAAATCCA
GAAATATTTGCATTCAAAAACGAATTGGGTTATGAAGTCACAGAAGGTGA
TGAATTACGAATCTGGTTTTATGAAGATCGAGAAAATCATTTGGAAGATG
ATAACAGTGGAGAGCATTGTGTTTATGTTCATGTCGTATATAAACGTGAT
ACGATGACGGGTACAAGTGTGCTTACAAATGTGGTTACAAATTTGGTTAC
ATAAGTTATAAAAGTTATTGGTTTTGCAAGAAACTTGGTACGGGAGCACA
CATGAGCCTTTTGCTAACTAATAAAGCAGATCAGAAACTCGATTTCGACT
CCGTGTTTATTCGGTATTGTGTCAGGTTAATATCAAAGGATCCTGTTTGT
TACCAAGCGAAGGATGACAAACCTGGTGGATTTGAAGTACCATACAGTGG
AGAGATCGTTATGGTGATCCTCAAACATTTTTCTGGATCCATTTCATGTT
ACCCTGGTCAAAACCTTCGACAACCCAACATCCTTCGACAATACCTCCGC
CATCAGAACTGGTCAACCTTTTAACGAGATTGATGTCAATCTATTCCTTT
GATCCAATAAATGATGATCTTTTTTGTGACGCAGACAACGACATCATCAC
CGACGCGATATAAATCCAGAAATATTTGCATTCAAAAACGAATTGGGTTA
TGAAGTCACAGAAGGTGATGAATTACGAATCTGGTTTTATGAAGATCGAG
AAAATCATTTGGAAGATGATAACAGTGGAGAGCATTGTGTTTATGTTCAT
GTCGTATATAAACGTGATACGATGACGGGTACAAGTGTGCTTACAAATGT
GGTTACAAATTTGGTTACATAAGTTATAAAAGTTATTGGTTTTGCAAGAA
ACTTGGTACGGGAGCACACATGAGCCTTTTGCTAACTAATAAAGCAGATC
AGAAACTCGATTTCGACTCCGTGTTTATTCGGTATTGTGTCAGGTTAATA
TCAAAGGATCCTGTTTGTTACCAAGCGAAGGATGACAAACCTGGTGGATT
TGAAGTACCATACAGTGGAGAGATCGTTATGGTGATCCTCAAACATTTTT
CTGGATCCATTTCATGTTACCCTGGTCAAAACCTTCGACAACCCAACATC
CTTCGACAATACCTCCGCCATCAGAACTGGTCAACCTTTTAACGAGATTG
ATGTCAATCTATTCCTTTGATCCAATAAATGATGATCTTTTTTGTGACGC
AGACAACGACATCATCACCGACGCGATATAAATCCAGAAATATTTGCATT
CAAAAACGAATTGGGTTATGAAGTCACAGAAGGTGATGAATTACGAATCT
GGTTTTATGAAGATCGAGAAAATCATTTGGAAGATGATAACAGTGGAGAG
CATTGTGTTTATGTTCATGTCGTATATAAACGTGATACGATGACGGGTAC
AAGTGTGCTTACAAATGTGGTTACAAATTTGGTTACATAAGTTATAAAAG
TTATTGGTTTTGCAAGAAACTTGGTACGGGAGCACACATGAGCCTTTTGC
TAACTAATAAAGCAGATCAGAAACTCGATTTCGACTCCGTGTTTATTCGG
TATTGTGTCAGGTTAATATCAAAGGATCCTGTTTGTTACCAAGCGAAGGA
TGACAAACCTGGTGGATTTGAAGTACCATACAGTGGAGAGATCGTTATGG
TGATCCTCAAACATTTTTCTGGATCCATTTCATGTTACCCTGGTCAAAAC
CTTCGACAACCCAACATCCTTCGACAATACCTCCGCCATCAGAACTGGTC
AACCTTTTAACGAGATTGATGTCAATCTATTCCTTTGATCCAATAAATGA
TGATCTTTTTTGTGACGCAGACAACGACATCATCACCGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034059XLOC_034059Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053952-proteinTCONS_00053952-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053952-exon-scaffold_237-1575043694:126014..126033TCONS_00053952-exon-scaffold_237-1575043694:126014..126033Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1575043694:124840..124967TCONS_00053952-exon-scaffold_237-1575043694:124840..124967Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1575043694:122632..122775TCONS_00053952-exon-scaffold_237-1575043694:122632..122775Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1575043694:120464..120571TCONS_00053952-exon-scaffold_237-1575043694:120464..120571Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1575043694:118155..118728TCONS_00053952-exon-scaffold_237-1575043694:118155..118728Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1510915933:126014..126033TCONS_00053952-exon-scaffold_237-1510915933:126014..126033Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1510915933:124840..124967TCONS_00053952-exon-scaffold_237-1510915933:124840..124967Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1510915933:122632..122775TCONS_00053952-exon-scaffold_237-1510915933:122632..122775Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1510915933:120464..120571TCONS_00053952-exon-scaffold_237-1510915933:120464..120571Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1510915933:118155..118728TCONS_00053952-exon-scaffold_237-1510915933:118155..118728Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1491911889:126014..126033TCONS_00053952-exon-scaffold_237-1491911889:126014..126033Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1491911889:124840..124967TCONS_00053952-exon-scaffold_237-1491911889:124840..124967Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1491911889:122632..122775TCONS_00053952-exon-scaffold_237-1491911889:122632..122775Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1491911889:120464..120571TCONS_00053952-exon-scaffold_237-1491911889:120464..120571Clytia hemisphaericaexon
TCONS_00053952-exon-scaffold_237-1491911889:118155..118728TCONS_00053952-exon-scaffold_237-1491911889:118155..118728Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:118155..126033 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.00038832	0	2.58898e-05	0	0.292698	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053952 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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