TCONS_00053917 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053917
Unique NameTCONS_00053917
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length698

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053917 ID=TCONS_00053917|Name=TCONS_00053917|organism=Clytia hemisphaerica|type=transcript|length=698bp
CCAATCCAGaccacagacagacagacattcaaCCTACCAACGAAAACATA
TATATAAAAGGATATAAAAGGATAAAAGTCTCATCTGCTACAGTGAAATG
GCTGCTCCTGGATATAtctcaaaaagtgttttttcaccaaatttgcCATT
GAGATTTTCTGCCAACTTAAGTTTTCTGTTCAGTCAAATTGAAGATCCTG
GGCAAAGATACAATCTTGCAAAGCAAGCAGGATTCACTTCTGTTGAATGG
GGAAATGACATTTACCAATATCCAATTCACGATTTGGTTGAAATCAATAA
AGATAATCATTTTGAGCATGTTCTCATCAATATGTTTACAGGAAAAACCA
AGGGCCTTGCATGCGTACCTGGAAGGTCAGAAGAATTCAAACAATGTCTT
GAATTATCAATAGAATATTGTAAAAATCTAAAGTGTAAAAGatTACACAT
ATTGGCTGGCCAATACTCTGAAGATACTGATATAACtcaagaaacaaaga
aaacttACCACGATACCTTCATTAATAATGTGACCTTTGCATCAGAACGG
CTTGCCTTGctgTGGATATTATCAAAGAGTTAAAATGCCAAAATGTCAAA
TTGCAGCTCGACCTCTTTCATCAACAAAGAACACGAGGAAGTTTGACAGA
AACAATTACAAAATACTTGGATCATATTGGACACATTCAAATCAGTCA
Run BLAST on NCBI

transcript from alignment at scaffold_237:415..20100+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053917 ID=TCONS_00053917|Name=TCONS_00053917|organism=Clytia hemisphaerica|type=transcript|length=19686bp|location=Sequence derived from alignment at scaffold_237:415..20100+ (Clytia hemisphaerica)
CCAATCCAGaccacagacagacagacattcaaCCTACCAACGAAAACATA
TATATAAAAGGATATAAAAGGATAAAAGGTATTATCAAcggatttttaat
ttctttctttagtTTTGTCTTTTTATATCTTTCAATCAATAATTTCATTC
TCAGTTTTTGCTGTGTCTTAAGGCGCTGTGCTGTACCCTACGCAAATGCA
CGTGTGGTATGTGATAAATTtataggttggtttggaaatcgttttatttt
gaaatgtaatcttcactttagatgaatacttttatttattggGATTcctg
aaaggttcaaggtttgtttactttttatttcaaattatttcattgattta
ttaaGCTGCAATGGgctatttcatttttaaaccagacccccgcgctcgat
aggatcgatcatcggaacggctcgatgacggatcgatatgtgtttcgata
agtaatccatcgatccggataggagatcgatagaggatcgatactcaaga
tttttttaagcttatgattagttatcgatctatcatcgatctattatcga
tctatcatcgatcttttatcgatcttatcgaccctatcgactctttctaa
aaatcgagctctaatattaatcgatctttctcgctatcgattacctatcg
acacatatcgattacctatcgacacctatcgattacctatcgacacctct
atcgatccaatcaaaatatcgaccgtttttttatattgattaatCGATCC
ATATCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNactcgattaacgatcgatgacgaat
cgattaacgatcggtgacgaatcgattaacgatcgatgacgaatcgatta
acgatcgatgacgaatcgattaaccatcgatgacgaatcgatgacgaatc
gattaacgatcgatggcgaatcgatatactcgattgaaatactagctcga
taatggatcaacgaaggatcgatactcaagactttttatggctgaatctt
ccatcgatctcctatccggatcgataagtaatccatcgatcacatatcga
tccgtcatcgagccgttccgatgatcgatcctatcgagcgcgggggtctg
gtttaaatcatacaggggtattgacgaacttttccagggggggctgagcc
ttgattttccaaggggcttttggtaattttcagattttccaagggggtta
ttaaaggtttccagggggttctctcCTCCTAAACTGGCATCGATAGTCAC
TTTCCAGgccttttttcacaaaatttcactttccaagGGTGTCGTTGACt
cctaatttccaggggatagtttgaaaaaagtgaaaaaagttcgtcaatac
ccctgtacaattttttttggaatagcccaatagcTGACAAAGATTTTTGA
CAGTTATCAgtgtgggcttggccgccattttgaatttcgatttttttctc
ctgtactcggcaatttagaggttgttcgtaatacgcaaTTTGGCTTACAC
GTAACACTTGTGGGTATCACGAAACGCCCGTTAGAAAAGTGCTCACCGGA
CAGTCTGGTGTACTTCAGTGCGCACTTTTAAATATTACTTAAAAAATTAC
CGGACACAGGAAAAACAACACCAGAATGTCCAGTGAATCGGCAGGGTcgt
gcatcagtggaggcaaacatgcatggccctcaaatgaatgacctgtctgg
tcattaaaatacaacttcacagctccactcgcagctctactctaccattt
ttgttttgatttaactttgtattttaatgaccagacaggtctttcatttg
agggctatgtatgttagcctccactgatgcaatttacctgatctcacggt
agTACACCGTGAAGactgaagtcgggtaacttgcatcagtggaggcaaac
atgcatagccatcaaatgactgaccaatcaaagcaacaaaatttcaaaac
aaatgaactacgcagctccgctcgcagctctactctatcatttttgtttt
tatttaagtttgtatttttACCAAActagacaggtcattcatttgagggc
tatgcatgtttgcctccactgatgcaagttacccgacttcatggtataca
tgttttttttataagcataacgtttataagcataccaagacctgaatttg
tctaaaaaataaacatattacaagcatattaATTAAGTGAGCTTGCTTTT
GAGGTATGtaagtgaaaattttaatttaaaaaaatacaagcTAAACGCGG
CAATCGTTCACAACTCTCCTGAACAATCTTTGTATCATTACTTATTTCCC
TATCCTCATGTATActttaattgtaaaaattttagcgagactaattttag
cgtatattagcgagtcaggaaaatcttgagtttttattggatttatttta
gcgaatcacgatttcaaaaaatttcgcgtggataaattttagcgaatatt
tGTATTaaattattgactgaattcgttttctatcatttctttgcactgaa
acccttcttattgataaaaatttatcaagtcaatataaccagaaattttg
cGCGGATaaaatttagcgatctgtcgattcggcgtgttttagcaagattt
attttggtgaaaatagggtaaactcgctaaaacgctaaaattagtctcgc
taaaatttctaccatTAAAGTAGCAAcgacagattttggaaaaattggag
acTCAAATCTTtcggaaaaataagcatatgataaacatacttcgagcctg
agtctaaaatatctctaagcataactgagcttgttttccaaaaaacatat
gcttataaaaaaacaacatgtagTAGTGgtgtcattgaccttggttgctg
cacaggtgACTGAGGTTCAATttccactcgcagcggttcactttgcccgg
gtcaacccatgccatgtgaggggaattggatagtcagtccaaggtgctga
cggggcgctcattgaaagcgtatatagttgcgaaaataggcctcacaaag
cctcctgcaactcaaccaaatagaaatagaaataagtgaacaaaaaagta
aaatcaacacagTTTGTTACGATATTTCGTTCTATTTTCAGAACTTTATC
AGGTATGATACTGCACAAGCGTTAACACATTTTTAAATGCTACAAAATCA
GTGATGCGTAAATCAAaagcaagaaataaaaaaatctacagtatgtggcc
cccaaaacggcgataaAATTTGAANtcgagaaataaaaaaatctaatgaa
caaaggaaaaaattctATAGGgaatgaaacaaagaaaatgttaaaaagat
ttaataaaAATAGGTGTGTAGCGATAATATTTACAACGTTAAAACAGTAc
aataaaattgatgaaaaaaaaaaacccgtggggaATAATcgtcaaaaaca
ataaaactgaaaatcaaacgAAAAAGGTTTCAAATTAGCACAGTAAACGC
AGTGGAAATTAAAACGGAAAATTAAATGCTCATGTCCCCAAGTCAATTAC
CTGGAAGCgaaataaatatttcataatttgttTTATCACACGAGCCTTTC
ACTAGTTAGATCTCGATAAAGCGAACAgggaatataattttgtttgaatt
aaaCATCCCTTTATCacagaaacaaagaaaaatttacttGAATTTCAAAC
TACCatcatccactaaatatttgagacaaaggagATTTCCCGGCGAAATT
TCAAataacaccacaaatgatttttaagcgggttaaactacagttggaaa
gtagagttttaactctgagttaggacttaggaccttaggatctcaggatt
taaaagctcaaatttgctcaaatgaggcatggaatatagcctagaagcca
tcaaacccctctaaaatcaaagtgttcaatggaagaaagtcgaagtgcta
aaatagcaattcttgcccgaactttaaattctgaaaaacgttaaaataca
ctaaaatctcaatatatttcgagggtGACTGTAGcgacaatagaatttca
aaccTCACTTGTCTAAAGCAGGAAGTTCTCTTTTGGACTCATCGCNTATG
TTAGTGTCATCCCCCTCCCACCCCGGGCTGAAAAATTCTACcagatctgt
gagaaggggtgttacATTTGCTTGATTCCAAATTCTTTTTAGGTGTGATC
AAAGTTTCAGCCTGATTTGTAATTGGATGAAAATTTGCGTGactcatttt
atgttttttatatttaaaaaataNCTGTAGcgacaatagaatttcaaacc
TCACTTGTCTACAGCAGGAAGTTCTCTTTTGGACTCATCGCGTCCAGCAC
ATCAATTTATCCCTACTGATAGTCAATTTTCGACTTGTCACTGAAACAGG
AGTGTGCTGTATGTAATTCGTAATTAAAGGaagttttgaattgaaaaggg
TTAAAGTATCTAGCGGTGAATCAAATCCCAACCATTCTTTGCATAACTCT
GAATTATAATACACTCAAAAAATGTAATCTTAATTCTTATTACTTGGACA
aatgtttcttgatttttgttaCTGTATGATGGCAATTCGTTACGAAAAAA
AATGCCCTCGGAAGTTAGAAGTGATTAGGGCTTCTGTTTTTTACCTacat
tacacccccttctcaccaaNATTTAATCTCTTTTTTCAGCATGATATTAC
aatatttagatttaaaaaaattgagacaGTGCTTGTAAGTACAAATTact
ggtttgagaaaaaaaaaaaattggtggtTAGAAGTTTTATATCATGTAAA
GTTATCAAGGTAAAGTACTAACATTGTAGGATTCATTATCTCCCAGTTTG
AATATTTCGATNTTAATTTTTGTCtccgttgaaaataatcaaataaaaaa
atccttgCTTAAActtttgtgctatttttctctatccccactgaattttc
tgacaaatatatattttctgggAATGTTAAAAATGTCTGTAAGggcaaaa
tattcattcaaaatcATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGAGCCGATCTATCAATTTGTACGTATTTTTCCCTCCGACATTA
AGTGTCGTAACAAACTATACACTCTTATCTTTTTCCTTAGAAAGACAAAT
CATTGAAGCACCAAGGCAAGAAGCATAGTCATGAGTCAAACGTTCTCGTT
TGAAGATAGAGTAAAGAGtataaagagaatttttttaaagacaatcTGAA
GATACGTTTCAGCAAGATGAGATACGAGCACTGCAAAAAATTTGTCTCGC
AAATGAACTTAATACAGACTTGAGCAGTATTTCGGCTGTTATTTTCTTAG
TATGATTGAACCCCCGGTGGGGGGATGTACTTCGGCAAAAATATGGGCGC
TGGGTATGACGCGTGCCTTAAGGGCTGGGtcaccctcccaaagtctctct
aaggtttACCAAGATCACGGCTTTGGGGGATCTCTTTTTTGTGACACTGT
AATGTCTTCTTTCGAGAGTAGAAAATGTTGCAAGTGCTTGTCAATAAatt
aatttcgcaaattttcaaggaagaaagaaaagaaacctAATAAGTTTACC
TAATTTAGTTAGGTATAAAGAGAAggagattttttggcctttgaTTTTAA
TGGTCGAGCAacttcgaaacttataaaattagttttgttgatatttttac
cTAGCTGTTTCCTTTTACCCCTCTGATTAATAAATATGTATTTTAAACGT
TCTCTTTAATAAAACCCTCTTTATTCCAGTTTATATTTGGGCTGAAACTT
TGAAGAAACTAGTGTAAGTCGGGTGTAAGTTAAGTTAATTATATACAtaa
aaggctttaaaaaaaactgaaaaaagaaagttttaaaaaatttgcaagCG
ATACATACATCTCTTGATTGACTCCCTCCCTCACGTATGCTTTTTGAAGA
ACCCTTTTTATTACGTATCGAAGTAATTAATTAGGAGATTCCAACCTGTT
CTTACTTCTACCGACAAAGCTTTCCgcgatatttttatccccaaccAAAA
CTTGCATTTCATTCCATTGTTAACCTCCCACGCCCTTTTTGCACTCTTAC
AGTatataatttcatcaaaatgggGTGAAATGAGTGGTTCTCCCTCTGGG
TAGAAACACTTATTTCCAAAACtactaaagtaaaaatttttgaatgttct
aaGGTGAGCCACTTTTTCCCGTCGAAGCTTTGGCCTAGGCTTCTATTATT
CTCAAACGAAAAAAGCTTCTTacaggaagtatatctatagggTCTATGAA
TCAGCTATTGTTTTTCCTCCAGTAGAGTAAGGGACTTGCGAAAAGGTACT
ATGtagaatttttcttatttaataCTAACTGTTATTTATTTGCAAACTTT
CTGTTTTATaagcttttttgtttgttttaagaCAACCAaatactacttta
ggcgtacagacTCGCAGACTTTCACgggtagaaactttcgcgattttcac
gAATTCTATTTTANAGGGACTTGCGAAAAGGTACTATGtagaatttttct
tatttaatactaaagtctgtctcgaaataatttgcagctggagaaaaaaa
tggctgtaacttttgatagaattccaatcaagttgcgattttgtgctcgt
taaaaagNtgtctttgaaaattcttgacaaaataaaaaaatctgtaaaac
gtctaacttaaaataaaatttaagatttatggcactttttagcctgttaa
AGTCTCATAAGTCAAAAGACATAAGTTTCAATCCAGTTCTAGAAGTATAC
GCTCGCAAAAGTAAATGTTGTAAATTTTCGTGATTCTTCGATCTCGCGAA
ACTTTGCACGCCTCAACAAGTACGCAAGCACTCAACAAGTACGCAAGTAC
TCAATTTCAATCCTTCATTTTCGACAATAAAACTGGAAATCAGAGAAAGA
TAGTGAAGCACGTTTCTAAGAGCGTGGGAAATTTATATCACGTAATAAAC
Attggaatgtcttctttttcttttaaatgttgcaaaaaaggagaaaaaaa
tgttgcaaaaaaggagaaaaaaatgttgctcAGTGGCGGCTTATTTGATC
TTCATAAATGACACTGCattatcttctttttctttgcaaaGAGCAGAACT
GGGGATGAGCGCAATGAAATACGCTAGAAAGTAAATTTCAATAAATGATG
AGTTTGACATGGGCAAATGtatcaaattcaaataaaaaatgataatcaaG
CATCATCTGATTATGATCATTTCTCCCCAACATGTTGCTAAATAGAGAAA
CCTTCGATTTGTAACATTTCAATCTCCAAGagaaaaggagtgagcctatA
AAAGtcattttccactaaataaagACAAAGTACTGAGACATGTAAAAAAG
GAaacatttctttctttaaaactttatttataAGTAGATACCAGTATTGG
ACTCGCCCATGGTGATGACGATCTTTAATATGTTCGAGACGGGAGTTATT
AAAGTCAGTGCTTATTtaggaaaatcaaatttaagaaaTCTTTGGGCCTT
TTTATCGATTATCTTTCCAAGATTCGAACTCGTATGTCGTATActccatt
ttgtttttgagatACTGCCCATAATGGTTAAGCTTAAATACTGCTGTGGT
GAAGTGTCTATCTTGATTTGAAAATTATCACTCGATTTGTCTTAAGGTAA
TTTTGAACAATATCTTTGACCTGCCGTAAGTAATTAACGATTTAGACCTT
TACAAAtgtaaaaaacaaattcaattgCCTATTctatagtatagtatagt
aaGTATAGATtaataaaatatcgaaatatgcGTAGTGGGAACTGATAATT
TATACAATCTTTCAGTACTTACTTTAAAATCTATACTTTCGATAGACCTA
ACAAGTTCTTTTTGATACCAAAAATTTGTACTCGTAATGACTGCCTCGAA
TTTATAaagttcttttatttatttcataaatcttcactgaaaaagaaagc
aaataCATATTATAAAAAGCCTCTTCTGATCAGAATGGTATTGGGAGAGG
TATACTCGCTTCCCTTTTTACACCTTCCAACCAAGGGCCAGATCTAAAGT
AAAGAGTTGTTAAATTTAAAGACTTATGGATTGAACTGAGATTGAACTAT
ACAAGTAAACTTTAGTAAGTAATAATGTTGGAAAGCATCCACCGAGAGGG
CCCTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
CAGTATTTGATGTCTCACGTCTTGGTTTGGCTAAGTCGTTACTTTGTATG
GCATTTTTGCATAAAGTTTCCACatgataattattttcattactgGATTT
TAAATTCAATGACATTTTCGAATTTACTTTGTAAACATAACGAACACTTT
AATAACATAGTCTACCTTTTTCTGACATTCTTCACGaacagattttattt
tatttgcgtGACCCTATTCGAAAAATGCACACATTCGTCATAACGCTTAG
ACATTCGTTTTATTAAGAGGCAAAGCGTTCGTCATGAACGCTTAAACTTT
CGTTTAAAAGCAAAGCGTTCGTCACGAACGCTTAAACTTTCGTTTAAAAG
CAAAGCGTTCGTCGTGAACGCTTAGACATTCGTCGTGAACGCTTAGACAT
TCGTCGTGAACGCTTAGGTATTCGTTATAAATCATAAAGCATTCGTGACA
AACGCCTCCCTGTTAAAGCGTTCGTCACAAATGAGTCGAAATCTAGAAAG
CGTTTTTGACGAACGCTTTAAAAGAAAGTCGCTCGAAAAGCATTCGTGAC
GAACGGATAGACCGTTCGTGACGAATGACTGACCATTCGTGTGTCCACGA
CGAATGCTTTTCGTTCCAGTAGTGGTTTATTCAGgacaaaaagcaaaaca
aaaagaaattacgGAACAAAACATGGGAACACCTGATACTAGTAGAGCAC
ACAACTGTGCTGTAGGCATGCCCGTAGGTCATACCAAGCAGTCCAAAGAA
GGGCGTTCTCCCAAAAACGACCGGTCATAACCAAATGAACGCAGTATTAG
CTCAATACTAGCATCAGTTATCCCCAGAAAACTAAGGAGTTCAAAAAATG
GCCTAACCCGGAACAACAACTTCACGAGCGTTCAACCTGTGAGGAAGGAA
CGTATTAAGTTTATATTGCCAAAAACATACCATATAGAAATATATGGTGT
GCTGAAGcgccaataaatactatctttgttgaaaacatactatcttttta
aaacctactatctttttgaaacaatactatctttttttaaacataccgtc
aactgctctaacttgggactatctgacaaaacatgggacagcaattcggc
caccatttaccaaacttccaaagtcatttgatttgagttaatgaacgggg
tattaaaaaatacacgatttctatTTTacactgagtaggcttttaaatcg
aaatatgaaaaaactcCGTAGTGGAACATATGCAAGTGTCTGGAATGAAG
AAGAATAAATTAGTAGCAAaatgatggagcgtttgaccTCACTCACGCGA
CAAGTTGcacacttgttatttgttaatcccatcgggtgataggcggttag
gcggcggtCGTTATCTAATTCTCTGATTAGCgtttaggctgcacgcatcc
cctctgatatgatttgatataggggatgcgtatcgtctaaGATATTCCTG
TCCCagcttacccccgtcttttcttttctctttNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNcgtcttttcttttctcttttttgattA
TGTGTCACAGCTGTACAACGacttctctttttctttgtttaatgaatgaa
aatttataattatgaAAGCAATAagacaatgacgtcatttttctctttct
gtgATTGGGTGTAgcaaaattatgtaaatttataCAACTTtcggttaccc
caaatttgaggtaactctcggacgagaatttcatacacgatacgcatccc
ctataacaaaataaattctggggatgcgtgcagcctaattAGCGTTTGGT
CATtgttaataaaaacaaagagttaaaaagcgctatcagtaaaagttatc
gtgacatgttatgacagaaagtatgattgataaacttggtggagttatca
aaacaaatttgttgtcaaagagatttgagagtaagtgaaaatacaggcca
gaatatcaacagtcccatttTTTGACCAATTGTCCCAATTTAGAGCAGTT
AACGGTATTATTActatactatcttttttttaaacatactatctttttaa
aacaatactatcttttttaaaaacatactatatcttcgtttaaaaacata
ctatttcgtttaaaaagaaactatcatatTTAAACCAAAACTATCTAAGT
ATCTAATCCAATcttagggagaccaggctgtaaaccagaacataaaatat
caaaaactaaactgtgaaatagtttacagcctggatatccaggctactat
CTAAGTTTAACCGATACTTGGatccaaaatcgaaatcgaaacttAACTTC
TAAGGCCGAGTTACGGTTGTCGAGTTATAGATCAACTAATTTGACTGATA
ATAAAAAATTCTGAGctaaaaatttttcttgtctTGCTTATCTGATTTCC
AGCAACTTGTTTCTCGTCAATGATTTTGATTGGCCTTCCCCTCCTCGTTG
ACAAAATAGCGACAAAATAACATTCAATAAATGTTCTTTTCTGTACTGTA
CAGTAGTCCACTGATATACTTATACATAAGTTACATGCTTATCAAATCCA
ATCTTAGCAGCTAGTAAATAAGGAAGGAACTTTTGAGGcagaaattttct
aaaaaaataaggaactccagtcTAGGAGCCAAGTTAAGTTAAGGttcctt
tataaaaaaaacaagtatcTCTAAGCCTTGTTGAAAATATTATGATATAT
GATTCATATTTTCTTCTTTACAGTCTCATCTGCTACAGTGAAATGGCTGC
TCCTGGATATAtctcaaaaagtgttttttcaccaaatttgcCATTGAGAT
TTTCTGCCAACTTAAGTTTTCTGTTCAGTCAAATTGAAGATCCTGGGCAA
AGATACAATCTTGCAAAGCAAGCAGGTAATAATTGTAAAATGTAACAAAC
TTATAAATAGCTTATatgatttcaaaaagaattgtcatgattatttgaaa
attattcaaaCNTTCAAAAAGATTTGTCATgattatttgaaaattattca
aaCTTCTTTATTTAGGGTATATActtttgctatattttcttttttttaaa
tctttttacaGGATTCACTTCTGTTGAATGGGGAAATGACATTTACCAAT
ATCCAATTCACGATTTGGTTGAAATCAATAAAGATAATCATTTTGAGCAT
GTTCTCATCAATATGTTTACAGGTTTGATGTCATTATTGAAATAATCCTG
ATAACTTTACAACTTTCACATAACTGAAATGTTCAAATAACCTGGAAAAC
CTtaagtttattaatttttgttgtGTACTTATTTAGCCGTTGGCCAAAAT
GCAATCTTTGGGGAAAATTCAATTTGGTGAGTGGGGAGATTTTAGGCATT
TGTAAATCAAAGATTACTTGgtattttaatagtttttacttaaaaatgct
gattttagATAGAATTTCTATTCTAAAAAGGTTTTGTTTAATTTGTCACC
AAAAAATGCCAAACCTACTAACACTAAAGGTTTTAGTTTTTCTTATTGTC
CAGGTATTAATCTTCCAAAGAGTTTTCTTTTACATGAATATGGTTGTTCC
TATTATTGTACAAGAATTGTTACATAAAGATATGATGGTAATATCAGGTA
TATATAATGCTGATAAAGGAAACTTGAACATGATATATAGCAATAACATT
TTCATTATCTTTTCAGGAAAAACCAAGGGCCTTGCATGCGTACCTGGAAG
GTCAGAAGAATTCAAACAATGTCTTGAATTATCAATAGAATATTGTAAAA
ATCTAAAGTGTAAAAGGTATAATTGAATCTTGTGAGATGAATTCCTTGGG
ACATAATAATTTAAAAGCTCTCTCTGCTTTGATGATGAGAATACCATGGT
GTAGGCTCATGCGATTTCCTCAAGTGTAGGCTTCATTAACTATATAAAGT
TGTAATTAGGTTGTCTTGTATTAGCCTAGTAGCTATTTGTTTTTATGTCA
ACAATtaatgaataaacaaaaaacttttttttcttagatTACACATATTG
GCTGGCCAATACTCTGAAGATACTGATATAACtcaagaaacaaagaaaac
ttACCACGATACCTTCATTAATAATGTGACCTTTGCATCAGAACGGCTTG
CCTTGGTAAATACTTTAGCTTTGGTTTCGGAAATTTTCAGACCACCACTA
GTCCATTCGCGTCGCTTTATGTTTTTCGTTTATAGAAAACTCAAATGATT
AAAGGCTAATTTCTTTTTAAGATGTTTGATGTCAAATACATTTACCTTTA
AagggcttttccaaaaaaaaattttgatcttATACTTTCCTGTCAGTCCT
GGGGAAGGTACTAGGATTGCAAGTTGACAGGGGTTGCTGCCTGAAACTTT
TGGGTcttgttttggtttgattttcagatttttacaactcttagtgggac
tttggaagaccaaaaaaggtaccctaaagGGTGACACATAcctgtaccct
ccatttgcccaAGTAGCCTCCCTCCACTAAGTGTCAGTCAAAGTCAAACT
TAAACATTCAttgcaaaataaaaattgattttgtttatAATCAATAATAA
GGTATGAAAATGATATTCAACCTGTAAAAAGATTTGGTCAGACCAAAGAA
GCaacaaattactgaattttcaTGTTTCAGGAAAATATGACCATTCTTTT
AGAACCAATATCAACCATTGATCGATATTTCATGGAAAGCGCTGATCAAG
GTTAGTCAGGTCTTCAGGTCTTTGCTGTAAAATGGACATGCTTCAGATCA
TTGTACACAATTTTAGACGAACAAtgaatgaggctcaaaatcactaaaaa
ataagaacaatttgagaacAATGCTGAACCTGGAATTACttaatttcaat
caatttagggaTCAAAGTAGTAATAATTGGGTATAACGTCCTGAAAACCT
CAATTTCACCCTATACATAAGAACAGGATAGAagcaatttgaggctcaaa
gtgtcaaaaaaagaacaactaagTCTCGTCAAAATTCtactagttcttat
aaagaagtGTTCTTCTAAGACAAGTTAAACAATCAATACATTACTCAGAG
TTTCGTGCTCCAAGCAATCACTGGTATTGAGCACTTTCTTGTAAATATGT
TCACCAAACAATCGATATTGTTAATGCTATAcattcattttgttttatta
gcataacgtttataagcatacttaggctcaatTTCGGTAGAAAgtaagca
taatgctaagcatacctctaagctgaaatgaaaaaaaatcgtcCAGCTTT
TCTCAAATGCTGACGtttttagggttacttttaaagctgtttcagctttc
ttagaccaaagattttcgccTACGGcgccaaattacaaaaaaaattacgt
tCTTAGAGCAGAATCAATGTTCTGactaaaaaattcgaaattttcatgga
cccaaagaaaattgacaaatcaaagtctaagcatataaataagcataaac
taaggctgaaaatgagattttgctaagcatattgagCTATCACCCGaatt
ttcccgtatgcttataaaaccaAATGAGCGTACTCATTTAAAATGTCTTT
TACACGAAAATTGCATTGAAAGAATGACTAAAACGATGTGATCATTTTTG
GTTTTCAAGGAATTGATTTGATGTCTTTCTAACGGATAGTGGTTTGTTAC
TCAAACAATAACTATAACTTTCACTCTTAACCCTCCTGTAGGGAAGTTTG
AAGGCTGATTCCAATTTAATGTAGATgttaattcaaaaaaaaaattattt
ttttggacctaccccggtggaggtcctataaattaacctccgttcgtccg
tttgttcgttcgtttgttcgttcgttaccaacttttctcgagattggctc
attagttttttctgattttttgcacaaagatatgtagctataaaccctcg
aatgtgacggagcccgattttcgaaaaaaaaattttttgggcaaatttgg
accaaaaaacggctcaaaaatgggttttttggactttgtgaaaaattgga
tcattaattttttcagattttttgcatgaaagtagagtaccatcataggt
aaaagatggctcaagcagattttcgtaaaaaaaaatttgttggctcaaaa
aacgcatgtttatctataagaatcactattaataagcatacataaaaatg
ttcttagtcaaattactcaattttttttatgaggtaGATGTtctttttgc
tcatgagggcttacttttgaagaatatgtgtgtttagaaataaaattttg
gttgcCTAGCgtgattttatagaaaaactggccaaattccgatatttttt
tataagcacattatcaattacttaggtattagcttttctcgagattggct
ctttcattgtttatgattttttgcacaaagatgcataactataaaccctc
gaatttGACGGAGCcctaatttcgaaaaaaaatgtttttgagcaaatttg
ggctaaaaaacggctaaaaacaggttttttggacttggttaaaaattgca
tcattaattttttctgattttttgtatgaaagtagggtaccatcataggt
aaaagatggccaagcagatttttgcaaaaaaagtttgttggctcaaaaaa
cgcatgtttatctataagaatcactattaataagcatacatcaatgttct
tagtcaaattactcaattttttttatgagatagatgttccttttgctcat
gagggcttacttttaaggaatatgtgtgtttagacataaaattttggttg
cttggtgtgattttatagaaaaactggccaaattcgatatttttttaaag
cacattatcaataacttaggtattagcttttctcgagattggctgtttta
ttctttatgattttttgcacaaagatgcataactataaaccctcgaatgt
gacggagctcgatttttgagaaaaaatatttttggggtagattttagcta
aaaaacggccaaaaaaagagttttttggactttgtgaaatattggatcat
tgattttttgcatgaaattaggtaaaagatggctcaagcagatttttgta
aaaaaaagaatttttcagctcaaaacacgcatctttatctataagaacca
ctattaataagcatgaATTAATGCTCTTAGCCAAATTGGTAaattttttg
gagatgttttgatatttttttgctcacgaagtcttgaatatgaaagaata
tttcaagagcatgaaattttagtttctaaatgttttttttataagaaaca
aatgactaattttaatacATCGTcaatatttgtgttctgaatgattgttt
aatggtcacgctcacgtagatatcagtTATATaggtgttaaatgcataac
caggtaggtccataaaagtatcacttgttatttttattattttatttttg
ttgtgcTTAAGATTTCACTCATGCTAGGTGCAGCTTGTGCCTCCTATTAT
TCTTTAATTTCTAATCtcttgctttttctttttttagctgTGGATATTAT
CAAAGAGTTAAAATGCCAAAATGTCAAATTGCAGCTCGTAAGTTAGTTAT
CTACAATAGTTTGGTTTGATTcctatttattttgttatatagGGCGAGac
taatttaatttgttgttctacgggcccgaccgaccttATTTcagctaaaa
tcaaaaaaagaataatattgaatttccactaaaatatatttcacacacta
gttatttgtaagaattaaatttgaataaagctgaaaatcaattcaataaa
ttgaaaatttagaaaatcaagcaagcattccatacactaaaattttatta
tgataaaaTTCTTCATCGAAGAttaaaaaagtgaacttttgatccagata
ttttttggaaaatattttcagtaccttaccaaccctgataaatgaaaaat
ttattcttattttaccgaccgaccgacccatatttttctaacaatctgcc
cgtagaacaacaaattaaattggtctcgcctagtTGGGGGAGAGGAAAAA
ATCACCCTTGCCCTGGATGTAGCATAGCAACAAAGGTTATATCACAAACT
TTGTAACATTCTTATGTCTTGTTGGATAGCCAATGAGTCCTCATTCGAGT
TGACTTCTCTGAAAATCTTCGTGTCGTCAGCAGTCTTAAATTCCTCTTTT
TTCTCTGTCAGCCATTTTGAATACCTACAAGTTAGTATTGTCAAAATAAC
ACCTTAAGTTAATATGATTGGTCCACTAATCTTAGCTAATGGGTGAATGA
ATTACcttaaagagatttttttttgggTCGCGAAAATTAACCCAATTATG
AAATATGAATCAGacttgtttttaaaacattttccagGACCTCTTTCATC
AACAAAGAACACGAGGAAGTTTGACAGAAACAATTACAAAATACTTGGAT
CATATTGGTAGGAATTGTTCGTCATTGGAAGAATTGCCTTATGGGACATT
GTCATTTAAATGgtacaaaaaatagctgtttttgCACCATCTTTACACCC
CTGActagttttgaaaattaaagacTCGTAAATGTCTACTAGGCCCTACA
CTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTATGGGTAGTCAAAAAACATTCTCAAATTTAAGTTCTCAT
GTCATCTCATCTGGCAAATTTAatatattttgatgattcttccattttga
ttttgattaacTTGTACCCTAAAGTTTGCTTACACAgcacttttaaataa
aaataacaattttaccGCATTTcgagaaattctattgtttggTAGCATAA
GATACATTTTCATcacaaaaaactttaaaaaggcaaagacaaaaaaatac
aTCTTCTCAAACCATTTTTACAAGTAAATTTaaacgttttgtttttaaat
aagagcgatatcgtttgcttactcatcaattttaattcacaagctttttc
acattggatgacacgtatgtggagcaaaattggccagaaagaggaaaaga
aaaacataatttgcttatatcagcataatataacaataggcagacactgt
cctgatatgaaatatgtatctgatataaaacgggaacacttatgtaaaaa
taaaacctttaaaaaggcAAGGACAAAAAAATACATCTTCTCAAACTATT
TTTACAAGTAAATTTAACCAAAATTTATATCAAATAAAACTTCactcgtt
ttttgtttttattatatgcAAGTGTTTACTCTATATCAGGCTCGccttat
gcttagcattctattattcttaaacaatagagccattgctAAGGTACCCA
AAACTGAGTTTgtatatatgcttataaacgttatgcttatatagaagaaa
aaaaaaaattttcatcaaatttagtCAAATTTCATATCATATAAAATCTC
GTTTTTGTCACCATAAGTTAAGAgtaatttttaccaaaaaaaaaaaatct
ccttTGATGATTTTCAGGACACATTCAAATCAGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034043XLOC_034043Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053917-exon-scaffold_237-1491911889:415..492TCONS_00053917-exon-scaffold_237-1491911889:415..492Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:415..492TCONS_00053917-exon-scaffold_237-1510915933:415..492Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:415..492TCONS_00053917-exon-scaffold_237-1575043694:415..492Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:12338..12489TCONS_00053917-exon-scaffold_237-1491911889:12338..12489Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:12338..12489TCONS_00053917-exon-scaffold_237-1510915933:12338..12489Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:12338..12489TCONS_00053917-exon-scaffold_237-1575043694:12338..12489Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:12676..12786TCONS_00053917-exon-scaffold_237-1491911889:12676..12786Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:12676..12786TCONS_00053917-exon-scaffold_237-1510915933:12676..12786Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:12676..12786TCONS_00053917-exon-scaffold_237-1575043694:12676..12786Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:13281..13380TCONS_00053917-exon-scaffold_237-1491911889:13281..13380Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:13281..13380TCONS_00053917-exon-scaffold_237-1510915933:13281..13380Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:13281..13380TCONS_00053917-exon-scaffold_237-1575043694:13281..13380Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:13602..13719TCONS_00053917-exon-scaffold_237-1491911889:13602..13719Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:13602..13719TCONS_00053917-exon-scaffold_237-1510915933:13602..13719Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:13602..13719TCONS_00053917-exon-scaffold_237-1575043694:13602..13719Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:17102..17151TCONS_00053917-exon-scaffold_237-1491911889:17102..17151Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:17102..17151TCONS_00053917-exon-scaffold_237-1510915933:17102..17151Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:17102..17151TCONS_00053917-exon-scaffold_237-1575043694:17102..17151Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:17952..18021TCONS_00053917-exon-scaffold_237-1491911889:17952..18021Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:17952..18021TCONS_00053917-exon-scaffold_237-1510915933:17952..18021Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:17952..18021TCONS_00053917-exon-scaffold_237-1575043694:17952..18021Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1491911889:20082..20100TCONS_00053917-exon-scaffold_237-1491911889:20082..20100Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1510915933:20082..20100TCONS_00053917-exon-scaffold_237-1510915933:20082..20100Clytia hemisphaericaexon
TCONS_00053917-exon-scaffold_237-1575043694:20082..20100TCONS_00053917-exon-scaffold_237-1575043694:20082..20100Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:415..20100 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.78998e-09	0	0.163753	0.384058	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00053917 vs. Swiss-Prot (Human)
Match: HYI (Putative hydroxypyruvate isomerase OS=Homo sapiens GN=HYI PE=1 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.726e-21
Identity = 47/141 (33.33%), Postives = 67/141 (47.52%), Query Frame = 2 
Query:  146 PLRFSANLSFLFSQIEDPGQRYNLAKQAGFTSVEWGNDIYQYPIHDLVEINKDNHFEHVLINMFTGKTK----GLACVPGRSEEFKQCLELSIEYCKNLKCKRLHILAGQYSEDTDITQETKKTYHDTFINNVTFASERLA 556
            PLRFSANLS+LF ++     R   A  +GF +VE      + P        +      VLIN   G  +    GL  VPGR   F++ LE ++ Y K L C R+H++AG+  +  D     K      F+ N+  A+  LA
Sbjct:    3 PLRFSANLSWLFPELSGLPARVRAAGSSGFEAVEVAWPYAETPEALARAAREAG-LRLVLINTPPGDQEKGEMGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRI-AVKAEMEAVFLENLRHAAGVLA 141

HSP 2 Score: 42.743 bits (99), Expect = 1.726e-21
Identity = 17/46 (36.96%), Postives = 32/46 (69.57%), Query Frame = 1 
Query:  559 AVDIIKELKCQNVKLQLDLFHQQRTRGSLTETITKYLDHIGHIQIS 696
            A  I++++   N++LQ+D+FH Q   G+LT  I ++L  +GH+Q++
Sbjct:  169 AAAILQKVGRPNLQLQMDIFHWQIMDGNLTGNIREFLPIVGHVQVA 214
The following BLAST results are available for this feature:
BLAST of TCONS_00053917 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HYI1.726e-2133.33Putative hydroxypyruvate isomerase OS=Homo sapiens... [more]
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