TCONS_00053816 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053816
Unique NameTCONS_00053816
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053816 ID=TCONS_00053816|Name=TCONS_00053816|organism=Clytia hemisphaerica|type=transcript|length=3119bp
TAGATAAATATAGAAATTTCCACCGAACTTCAAATCCTGGTAAGATCATC
CATCGTTGGTAGCGAAAGAAAATCTGTGGTTTTATTCTTAAAATAACAAG
TTTGTGGAAAGGATGTGATTCGGATCAAAATAATCTGTCGCAGGTGGTTC
GCAACTTATAATGGACATCAGATTATTAAATCATGTAGttctaaaattaa
attcaaattgaagaagaagaaaaatggtGAAATAGAATTTGTTCCCAACT
GAACTCTTAAGTATATTTTTCAAAGACGGAATATTTAATGATATTAAAAC
CGTAGTGAAAAGAGAATCTTTCACAAACTATTTTTCTCTctgaaaaatct
ttctaaagAAACCTTTACAAACCAAGATATCTCTGAAGAGAAATCTTTGC
TatagaaaacctttaaaactaCACCCCTTGCTTAACAAGATGAACACTTC
GTTCAACGATTTGAAAGAGATATTCTCCACACCACCAACTGAAGCAAGAT
ATAGTTGGATCATACACAGTGGGAACCAAACACTGGAAGCATCAGCAGTC
AGGATGCAGCCACCAACAGCTGATACTGCAGCTAGCAACAGTCAGCAACC
TCCACCACGACCACCTAGAGTAGCTAGGACAAACTCCTTGAATCCGTTTA
CACCACCAGATGAGGTTCAAACCAACTCTGAAACTGCGCAGATGTCCCAA
TCGCAAGAAGTCGCAAATAAACGAATCAAAACTGATGAACCAGAGGAACT
CCTACTTGACATGGTTGATCAACAATGTACAgaccaaaatcaacaaaatg
tcTCTCCTTCACAGAGATCTCCAATCCGCCCAAGCAGTATTTCGCCAcgc
caatttttgagaaatcacgCACGAGGGAGAGATCAAGGAGATTTTACANC
GAACCAGAGGAACTCCTACTTGATATAGATGATCAACAATGTACAgacca
aaatcaacaaaatgtcTCTCCTTCACAGAGATCACCGATCCGCCCAAGCA
GTATTTCGCCACGCCAATTTTTGAGAAACCACGCACGAGGGAGAGATCAA
GGAGATTTTACAGATAGTAAAGAAAATAATATGCAACAACCACAATCATC
AACACCTGATAGTCTAGACGACTATTCTACAACACGTGGTTGCTTGGGTG
ACAAGTTCAATATCCAATCAAAATATATCGCCAAGAGACTGCAGTCAAGG
CAACCGTGTACAAACCAAAATGGTAGCGCAGCATTGACAGGGTACCAACT
AAAAAACATGAGGCTGCAAGAAGAAGTGAATTCAGCAAATAAGAAAATAC
ATCGTTTGAACCATATCAATCAGAACGCAATGCAACGAAAAAGCGAGCTT
CAAAAAGAGGtcttagatgcttataagaaaatatcaGAGCTTGAGGTAAC
AAGACACACTTGGAGTGAGAAACAGAGAGAGTTGGCGTTGGAATTaaaga
catcaaaacaaaggatTGGAGATGCAGAAAGGGAAGCAGCACATGCTATA
GgaTGCCAAAGCAAACTCCAACGTGAGCTTATCGAAACTGAAAGCAAGAA
ACAGAAATATTTCGAAGGTCTTGATCATGCTGAAAGAAGGATTTCCAAAC
TGGAAGAGCTTATGAAAGAACTTGAACTGGAATCAAGACAAGAATCTCTA
ATGAAATCTGACCTGGAAAAGAGGCTGTACGAAAGTGAGGCTAACCTTAA
ATTAGTGTCAAGTGATAATACAAATTTGATCAATAAACTTGGTATCAAAG
AGAAGGAACATTCAATCATTGAAAAACGTCTCGAACGTGAAATTGCCgaa
aaagaacaaattgaaTCCAAAACGAGTGAGCTTGTTAAAGAGAACAACCA
TTTAAATAAAGAGCTCAATCGGTTAGAATCTAAGTATGAAATGGCTGAAC
GAACTATTGGTCAATACTCAACCAAGTTGTCTgctgagaaagaaaaatat
cagtTAGCAAGTACATTGAAAACTGAATCAGAACGCGAGCTCAGAGATAC
GAAACAAACTCTGATGAAGGAACGCGCACAAAAAGAACTCTTGAATACTG
AATGCCAAGTCACTATCGAGAAATATCGTAATCTGAAACGTAACTACGAG
AAAACGTCTAAGCAAAATGAGCTATTACGGCGTGAGAATCGAGATTTAAA
AGATCGTGTTTTGTATTTTGAACTGTATCAAAAAATTAGTGATAAAAAAG
CCAGACCAGAAAATGGAGGGACATCAAGTGATAAAAAACGGACCACCTTT
CTTGATACATTGAACGAACTGAAAGTCTCTAAGGAGAAAGCACAAATCCA
ACGGAGCCGAAACGGATCACGTGACTCTTGGGACATTGAAGATGGTGAAC
AAGGAGCCTGGGACCAATCACAACGCGTTCAAAGGGCTTGGGGCGAGGGT
CATGGACGATCTTCAAAACATGGTTCTAACAATTCTCTTGATCGGTTAAG
TGAAATGAGTGctcaaattgaaaaattacaaaaagaacaaaaagtgttaA
ACCACGTAACTGCAGAAAGTTGTAACGGAAGTAGCAAGGCACCCAGTCGC
ATCAACACAGCTCGCAAAAGTATTTCGCCACGCAGCGAGCATCTCGTATA
TCCAACGCGTAGTCCACCTAAGAGTCCGAATAAACATAGTGCTAGTCTAG
ATGTACCAAACCCTAATGACACTATTATGAGCTTTAATGATGATGAAGAA
GAGGGAGACATTCAAGTTGGCAACTTGGCTACATTCAGTGATCTCCTCAA
TAACAACACCAATAAAGACATTGCTAACGCCCTTTTATAGAACCCTTTTG
TTTAATATAGTATAGCTTTAATTTATGTATCATTTAGGATATTCTTACAA
ATTTTATTGGTGGTTCGAATAAAGTGAATATTCGATCTTCCAACGACACT
GAAAANTTTTATtggtgattcgaataaaaaagtgaatattcGATCTTCCA
ACGACACTGAAAAAATCTCGGAAAAAATCTGATTTTAAGTCTATATCGAA
CTCAACTAATAAATTACAGTCAAGAGAAAATTGGGAACAGAATCTATAAA
TTCTACATTTGGATAttcagattttttgaaacttatTAATGAATAAAGAA
TTTATACTTTATAGTGATT
Run BLAST on NCBI

protein sequence of TCONS_00053816-protein

>TCONS_00053816-protein ID=TCONS_00053816-protein|Name=TCONS_00053816-protein|organism=Clytia hemisphaerica|type=polypeptide|length=671bp
MYRPKSTKCLSFTEISNPPKQYFATPIFEKSRTRERSRRFYXEPEELLLD
IDDQQCTDQNQQNVSPSQRSPIRPSSISPRQFLRNHARGRDQGDFTDSKE
NNMQQPQSSTPDSLDDYSTTRGCLGDKFNIQSKYIAKRLQSRQPCTNQNG
SAALTGYQLKNMRLQEEVNSANKKIHRLNHINQNAMQRKSELQKEVLDAY
KKISELEVTRHTWSEKQRELALELKTSKQRIGDAEREAAHAIGCQSKLQR
ELIETESKKQKYFEGLDHAERRISKLEELMKELELESRQESLMKSDLEKR
LYESEANLKLVSSDNTNLINKLGIKEKEHSIIEKRLEREIAEKEQIESKT
SELVKENNHLNKELNRLESKYEMAERTIGQYSTKLSAEKEKYQLASTLKT
ESERELRDTKQTLMKERAQKELLNTECQVTIEKYRNLKRNYEKTSKQNEL
LRRENRDLKDRVLYFELYQKISDKKARPENGGTSSDKKRTTFLDTLNELK
VSKEKAQIQRSRNGSRDSWDIEDGEQGAWDQSQRVQRAWGEGHGRSSKHG
SNNSLDRLSEMSAQIEKLQKEQKVLNHVTAESCNGSSKAPSRINTARKSI
SPRSEHLVYPTRSPPKSPNKHSASLDVPNPNDTIMSFNDDEEEGDIQVGN
LATFSDLLNNNTNKDIANALL
Run BLAST on NCBI

transcript from alignment at scaffold_234:455974..459569+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053816 ID=TCONS_00053816|Name=TCONS_00053816|organism=Clytia hemisphaerica|type=transcript|length=3596bp|location=Sequence derived from alignment at scaffold_234:455974..459569+ (Clytia hemisphaerica)
TAGATAAATATAGAAATTTCCACCGAACTTCAAATCCTGGTAAGATCATC CATCGTTGGTAGCGAAAGAAAATCTGTGGTTTTATTCTTAAAATAACAAG TTTGTGGAAAGGATGTGATTCGGATCAAAATAATCTGTCGCAGGTGGTTC GCAACTTATAATGGACATCAGATTATTAAATCATGTAGttctaaaattaa attcaaattgaagaagaagaaaaatggtGAAATAGAATTTGTTCCCAACT GAACTCTTAAGTATATTTTTCAAAGACGGAATATTTAATGATATTAAAAC CGTAGTGAAAAGAGAATCTTTCACAAACTATTTTTCTCTctgaaaaatct ttctaaagAAACCTTTACAAACCAAGATATCTCTGAAGAGAAATCTTTGC TatagaaaacctttaaaactaCACCCCTTGCTTAACAAGATGAACACTTC GTTCAACGATTTGAAAGAGATATTCTCCACACCACCAACTGAAGCAAGAT ATAGTTGGATCATACACAGTGGGAACCAAACACTGGAAGCATCAGCAGTC AGGATGCAGCCACCAACAGCTGATACTGCAGCTAGCAACAGTCAGCAACC TCCACCACGACCACCTAGAGTAGCTAGGACAAACTCCTTGAATCCGTTTA CACCACCAGATGAGGTTCAAACCAACTCTGAAACTGCGCAGATGTCCCAA TCGCAAGAAGTCGCAAATAAACGAATCAAAACTGATGAACCAGAGGAACT CCTACTTGACATGGTTGATCAACAATGTACAgaccaaaatcaacaaaatg tcTCTCCTTCACAGAGATCTCCAATCCGCCCAAGCAGTATTTCGCCAcgc caatttttgagaaatcacgCACGAGGGAGAGATCAAGGAGATTTTACANC GAACCAGAGGAACTCCTACTTGATATAGATGATCAACAATGTACAgacca aaatcaacaaaatgtcTCTCCTTCACAGAGATCACCGATCCGCCCAAGCA GTATTTCGCCACGCCAATTTTTGAGAAACCACGCACGAGGGAGAGATCAA GGAGATTTTACAGATAGTAAAGAAAATAATATGCAACAACCACAATCATC AACACCTGATAGTCTAGACGACTATTCTACAACACGTGGTTGCTTGGGTG ACAAGTTCAATATCCAATCAAAATATATCGCCAAGAGACTGCAGTCAAGG CAACCGTGTACAAACCAAAATGGTAGCGCAGCATTGACAGGGTACCAACT AAAAAACATGAGGCTGCAAGAAGAAGTGAATTCAGCAAATAAGAAAATAC ATCGTTTGAACCATATCAATCAGAACGCAATGCAACGAAAAAGCGAGCTT CAAAAAGAGGtcttagatgcttataagaaaatatcaGAGCTTGAGGTAAC AAGACACACTTGGAGTGAGAAACAGAGAGAGTTGGCGTTGGAATTaaaga catcaaaacaaaggatTGGAGATGCAGAAAGGGAAGCAGCACATGCTATA GGTATGAAACAGAATGGGTTCTAATCTAAAGGGAGTTTCTGGTATTGCTT ATTTTTATACACATCTACTAAGTATGAAGGTTTTCAATGCTTAGAACATC ATTTGAACCCTGTCTAATAGGacctttttagtttaaaatgTTTTATCTAA GTAGCAAAATCGGTGTCAGGTATGTGCCAGGCAAAAGGGTCTCGTCTTTG CTACCTCGATAGTCTCTTAactcttgaaattttttcaatcaataaTATGT ATTCAATTTAGAAGGTAGCCGGTAATAGGGTAGTTTGGTCATGAAAATTA ATTCTGTATAAGTAATTAGGACTTTGTTAACATGAATTCAGCTCCCCGGA CACTGCATAATTATCGCAACGGCGATGCATTTCTAAATTTAACAATATAA GGGTTGTTCTAAGTCTCACTAGCCTACAAAGGTCTACAAAGCTTTGAATT GATAAATCCCaatgatttcattttttaggaTGCCAAAGCAAACTCCAACG TGAGCTTATCGAAACTGAAAGCAAGAAACAGAAATATTTCGAAGGTCTTG ATCATGCTGAAAGAAGGATTTCCAAACTGGAAGAGCTTATGAAAGAACTT GAACTGGAATCAAGACAAGAATCTCTAATGAAATCTGACCTGGAAAAGAG GCTGTACGAAAGTGAGGCTAACCTTAAATTAGTGTCAAGTGATAATACAA ATTTGATCAATAAACTTGGTATCAAAGAGAAGGAACATTCAATCATTGAA AAACGTCTCGAACGTGAAATTGCCgaaaaagaacaaattgaaTCCAAAAC GAGTGAGCTTGTTAAAGAGAACAACCATTTAAATAAAGAGCTCAATCGGT TAGAATCTAAGTATGAAATGGCTGAACGAACTATTGGTCAATACTCAACC AAGTTGTCTgctgagaaagaaaaatatcagtTAGCAAGTACATTGAAAAC TGAATCAGAACGCGAGCTCAGAGATACGAAACAAACTCTGATGAAGGAAC GCGCACAAAAAGAACTCTTGAATACTGAATGCCAAGTCACTATCGAGAAA TATCGTAATCTGAAACGTAACTACGAGAAAACGTCTAAGCAAAATGAGCT ATTACGGCGTGAGAATCGAGATTTAAAAGATCGTGTTTTGTATTTTGAAC TGTATCAAAAAATTAGTGATAAAAAAGCCAGACCAGAAAATGGAGGGACA TCAAGTGATAAAAAACGGACCACCTTTCTTGATACATTGAACGAACTGAA AGTCTCTAAGGAGAAAGCACAAATCCAACGGAGCCGAAACGGATCACGTG ACTCTTGGGACATTGAAGATGGTGAACAAGGAGCCTGGGACCAATCACAA CGCGTTCAAAGGGCTTGGGGCGAGGGTCATGGACGATCTTCAAAACATGG TTCTAACAATTCTCTTGATCGGTTAAGTGAAATGAGTGctcaaattgaaa aattacaaaaagaacaaaaagtgttaAACCACGTAACTGCAGAAAGTTGT AACGGAAGTAGCAAGGCACCCAGTCGCATCAACACAGCTCGCAAAAGTAT TTCGCCACGCAGCGAGCATCTCGTATATCCAACGCGTAGTCCACCTAAGA GTCCGAATAAACATAGTGCTAGTCTAGATGTACCAAACCCTAATGACACT ATTATGAGCTTTAATGATGATGAAGAAGAGGGAGACATTCAAGTTGGCAA CTTGGCTACATTCAGTGATCTCCTCAATAACAACACCAATAAAGACATTG CTAACGCCCTTTTATAGAACCCTTTTGTTTAATATAGTATAGCTTTAATT TATGTATCATTTAGGATATTCTTACAAATTTTATTGGTGGTTCGAATAAA GTGAATATTCGATCTTCCAACGACACTGAAAANTTTTATtggtgattcga ataaaaaagtgaatattcGATCTTCCAACGACACTGAAAAAATCTCGGAA AAAATCTGATTTTAAGTCTATATCGAACTCAACTAATAAATTACAGTCAA GAGAAAATTGGGAACAGAATCTATAAATTCTACATTTGGATAttcagatt ttttgaaacttatTAATGAATAAAGAATTTATACTTTATAGTGATT

Coding sequence (CDS) from alignment at scaffold_234:455974..459569+

>TCONS_00053816 ID=TCONS_00053816|Name=TCONS_00053816|organism=Clytia hemisphaerica|type=CDS|length=4032bp|location=Sequence derived from alignment at scaffold_234:455974..459569+ (Clytia hemisphaerica)
ATGTACAgaccaaaatcaacaaaatgtcTCTCCTTCACAGAGATCTCCAA
TCCGCCCAAGCAGTATTTCGCCAcgccaatttttgagaaatcacgCACGA
GGGAGAGATCAAGGAGATTTTACANCGAACCAGAGGAACTCCTACTTGAT
ATAGATGATCAACAATGTACAgaccaaaatcaacaaaatgtcTCTCCTTC
ACAGAGATCACCGATCCGCCCAAGCAGTATTTCGCCACGCCAATTTTTGA
GAAACCACGCACGAGGGAGAGATCAAGGAGATTTTACAGATAGTAAAGAA
AATAATATGCAACAACCACAATCATCAACACCTGATAGTCTAGACGACTA
TTCTACAACACGTGGTTGCTTGGGTGACAAGTTCAATATCCAATCAAAAT
ATATCGCCAAGAGACTGCAGTCAAGGCAACCGTGTACAAACCAAAATGGT
AGCGCAGCATTGACAGGGTACCAACTAAAAAACATGAGGCTGCAAGAAGA
AGTGAATTCAGCAAATAAGAAAATACATCGTTTGAACCATATCAATCAGA
ACGCAATGCAACGAAAAAGCGAGCTTCAAAAAGAGGtcttagatgcttat
aagaaaatatcaGAGCTTGAGGTAACAAGACACACTTGGAGTGAGAAACA
GAGAGAGTTGGCGTTGGAATTaaagacatcaaaacaaaggatTGGAGATG
CAGAAAGGGAAGCAGCACATGCTATAGgaTGCCAAAGCAAACTCCAACGT
GAGCTTATCGAAACTGAAAGCAAGAAACAGAAATATTTCGAAGGTCTTGA
TCATGCTGAAAGAAGGATTTCCAAACTGGAAGAGCTTATGAAAGAACTTG
AACTGGAATCAAGACAAGAATCTCTAATGAAATCTGACCTGGAAAAGAGG
CTGTACGAAAGTGAGGCTAACCTTAAATTAGTGTCAAGTGATAATACAAA
TTTGATCAATAAACTTGGTATCAAAGAGAAGGAACATTCAATCATTGAAA
AACGTCTCGAACGTGAAATTGCCgaaaaagaacaaattgaaTCCAAAACG
AGTGAGCTTGTTAAAGAGAACAACCATTTAAATAAAGAGCTCAATCGGTT
AGAATCTAAGTATGAAATGGCTGAACGAACTATTGGTCAATACTCAACCA
AGTTGTCTgctgagaaagaaaaatatcagtTAGCAAGTACATTGAAAACT
GAATCAGAACGCGAGCTCAGAGATACGAAACAAACTCTGATGAAGGAACG
CGCACAAAAAGAACTCTTGAATACTGAATGCCAAGTCACTATCGAGAAAT
ATCGTAATCTGAAACGTAACTACGAGAAAACGTCTAAGCAAAATGAGCTA
TTACGGCGTGAGAATCGAGATTTAAAAGATCGTGTTTTGTATTTTGAACT
GTATCAAAAAATTAGTGATAAAAAAGCCAGACCAGAAAATGGAGGGACAT
CAAGTGATAAAAAACGGACCACCTTTCTTGATACATTGAACGAACTGAAA
GTCTCTAAGGAGAAAGCACAAATCCAACGGAGCCGAAACGGATCACGTGA
CTCTTGGGACATTGAAGATGGTGAACAAGGAGCCTGGGACCAATCACAAC
GCGTTCAAAGGGCTTGGGGCGAGGGTCATGGACGATCTTCAAAACATGGT
TCTAACAATTCTCTTGATCGGTTAAGTGAAATGAGTGctcaaattgaaaa
attacaaaaagaacaaaaagtgttaAACCACGTAACTGCAGAAAGTTGTA
ACGGAAGTAGCAAGGCACCCAGTCGCATCAACACAGCTCGCAAAAGTATT
TCGCCACGCAGCGAGCATCTCGTATATCCAACGCGTAGTCCACCTAAGAG
TCCGAATAAACATAGTGCTAGTCTAGATGTACCAAACCCTAATGACACTA
TTATGAGCTTTAATGATGATGAAGAAGAGGGAGACATTCAAGTTGGCAAC
TTGGCTACATTCAGTGATCTCCTCAATAACAACACCAATAAAGACATTGC
TAACGCCCTTTTATAGATGTACAgaccaaaatcaacaaaatgtcTCTCCT
TCACAGAGATCTCCAATCCGCCCAAGCAGTATTTCGCCAcgccaattttt
gagaaatcacgCACGAGGGAGAGATCAAGGAGATTTTACANCGAACCAGA
GGAACTCCTACTTGATATAGATGATCAACAATGTACAgaccaaaatcaac
aaaatgtcTCTCCTTCACAGAGATCACCGATCCGCCCAAGCAGTATTTCG
CCACGCCAATTTTTGAGAAACCACGCACGAGGGAGAGATCAAGGAGATTT
TACAGATAGTAAAGAAAATAATATGCAACAACCACAATCATCAACACCTG
ATAGTCTAGACGACTATTCTACAACACGTGGTTGCTTGGGTGACAAGTTC
AATATCCAATCAAAATATATCGCCAAGAGACTGCAGTCAAGGCAACCGTG
TACAAACCAAAATGGTAGCGCAGCATTGACAGGGTACCAACTAAAAAACA
TGAGGCTGCAAGAAGAAGTGAATTCAGCAAATAAGAAAATACATCGTTTG
AACCATATCAATCAGAACGCAATGCAACGAAAAAGCGAGCTTCAAAAAGA
GGtcttagatgcttataagaaaatatcaGAGCTTGAGGTAACAAGACACA
CTTGGAGTGAGAAACAGAGAGAGTTGGCGTTGGAATTaaagacatcaaaa
caaaggatTGGAGATGCAGAAAGGGAAGCAGCACATGCTATAGgaTGCCA
AAGCAAACTCCAACGTGAGCTTATCGAAACTGAAAGCAAGAAACAGAAAT
ATTTCGAAGGTCTTGATCATGCTGAAAGAAGGATTTCCAAACTGGAAGAG
CTTATGAAAGAACTTGAACTGGAATCAAGACAAGAATCTCTAATGAAATC
TGACCTGGAAAAGAGGCTGTACGAAAGTGAGGCTAACCTTAAATTAGTGT
CAAGTGATAATACAAATTTGATCAATAAACTTGGTATCAAAGAGAAGGAA
CATTCAATCATTGAAAAACGTCTCGAACGTGAAATTGCCgaaaaagaaca
aattgaaTCCAAAACGAGTGAGCTTGTTAAAGAGAACAACCATTTAAATA
AAGAGCTCAATCGGTTAGAATCTAAGTATGAAATGGCTGAACGAACTATT
GGTCAATACTCAACCAAGTTGTCTgctgagaaagaaaaatatcagtTAGC
AAGTACATTGAAAACTGAATCAGAACGCGAGCTCAGAGATACGAAACAAA
CTCTGATGAAGGAACGCGCACAAAAAGAACTCTTGAATACTGAATGCCAA
GTCACTATCGAGAAATATCGTAATCTGAAACGTAACTACGAGAAAACGTC
TAAGCAAAATGAGCTATTACGGCGTGAGAATCGAGATTTAAAAGATCGTG
TTTTGTATTTTGAACTGTATCAAAAAATTAGTGATAAAAAAGCCAGACCA
GAAAATGGAGGGACATCAAGTGATAAAAAACGGACCACCTTTCTTGATAC
ATTGAACGAACTGAAAGTCTCTAAGGAGAAAGCACAAATCCAACGGAGCC
GAAACGGATCACGTGACTCTTGGGACATTGAAGATGGTGAACAAGGAGCC
TGGGACCAATCACAACGCGTTCAAAGGGCTTGGGGCGAGGGTCATGGACG
ATCTTCAAAACATGGTTCTAACAATTCTCTTGATCGGTTAAGTGAAATGA
GTGctcaaattgaaaaattacaaaaagaacaaaaagtgttaAACCACGTA
ACTGCAGAAAGTTGTAACGGAAGTAGCAAGGCACCCAGTCGCATCAACAC
AGCTCGCAAAAGTATTTCGCCACGCAGCGAGCATCTCGTATATCCAACGC
GTAGTCCACCTAAGAGTCCGAATAAACATAGTGCTAGTCTAGATGTACCA
AACCCTAATGACACTATTATGAGCTTTAATGATGATGAAGAAGAGGGAGA
CATTCAAGTTGGCAACTTGGCTACATTCAGTGATCTCCTCAATAACAACA
CCAATAAAGACATTGCTAACGCCCTTTTATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033962XLOC_033962Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053816-proteinTCONS_00053816-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053816-exon-scaffold_234-1491911889:455974..457474TCONS_00053816-exon-scaffold_234-1491911889:455974..457474Clytia hemisphaericaexon
TCONS_00053816-exon-scaffold_234-1510915933:455974..457474TCONS_00053816-exon-scaffold_234-1510915933:455974..457474Clytia hemisphaericaexon
TCONS_00053816-exon-scaffold_234-1575043694:455974..457474TCONS_00053816-exon-scaffold_234-1575043694:455974..457474Clytia hemisphaericaexon
TCONS_00053816-exon-scaffold_234-1491911889:457952..459569TCONS_00053816-exon-scaffold_234-1491911889:457952..459569Clytia hemisphaericaexon
TCONS_00053816-exon-scaffold_234-1510915933:457952..459569TCONS_00053816-exon-scaffold_234-1510915933:457952..459569Clytia hemisphaericaexon
TCONS_00053816-exon-scaffold_234-1575043694:457952..459569TCONS_00053816-exon-scaffold_234-1575043694:457952..459569Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:455974..459569 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0487667 0.0356664 0.20706 0.162061 0.0328823 0.038976 1.11288 1.74622 2.08556 1.52707 2.03805 2.07861 7.35422 6.21436 3.96678 5.23763 4.21003 4.58719 2.56608 2.90221 4.89185 5.55409 2.15272 3.25342 5.55001 7.03268 0.752274 0.446026 0.0270636 0.0275735
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053816 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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