TCONS_00053801 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053801
Unique NameTCONS_00053801
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3232

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053801 ID=TCONS_00053801|Name=TCONS_00053801|organism=Clytia hemisphaerica|type=transcript|length=3232bp
TGATTATATGCGTTTTACAATTATGAACCAATCGGACTCGTACATCACTT
GGGTGAACAGTCAactgggtaaacgagacaaaagtCGTCACGTGAAAGAT
CTTTCCAAAGATATGAGGGATGGTGTGGTCTTCTTGCAGCTGGTTGAAGT
CATTAGCGATTCAGAGCAACAAATATTGGATCATTCACAACTTTCGATTA
ACGATATGCGATACAACTTGAACAACGTTTTGCAATTCTTATCCAACAAC
AATGTCAGGGTTCACCACATCTTACCAAAAGAAATCATCGAGGGAAATCT
AAAGACCACCATGAGATTGATTCTCGCCCTTGCCGCCCATTTCAAACCAG
ATTCCTTTAACTATAACGCCCTAAACAATAACACGAGTACGCCCTTAAAG
ACCAACACAAGTACGCCCGTCAGTAAAAGCACGAAGAAGAAATCTATGCA
AAGAGCACCATCACTCGTTTCGCTCGCTTCAGAAGCGGCCGCTTCACTAG
CTGAAGCGAGCAAAAATGCGTCGAAAGGCGGGTCGACTTCAAGAAGTAGC
AGAATCAGGAAGCAGCAATTATTCGACAGCGTTCCACCGAAAACAAAACA
TGTATCTCAACGCCACCAGCAATCGTCCAATCAGTATCAAGCTTCCAAAA
GCTTCACAATGCCTTCATCATCTTACCACAATCGGTCAGAATCAACACCC
CCACCCTTTGAACGCCCAAAAACCTTAAGAGGTGAAAGTTGCAGCGCCCA
AACTCGCCCTAAATCATTAAGACTTGAAAACACTCAAATCCCCGACTTAC
CGAAAAATGTCTTTAAACCGATTCGGAATAGTAGAATTTCCGTAACGGAA
TTTCCAACGGATGGATCAGAAATTAAAACGAAAATCTCAACTGAAGCTTC
AtcaacaaacattgaaaatgTAAAAAGGGCTTTATTACTAGAAGATAAAC
TATTACCTTCATCGAAAAGTACAGATGTTGATAGTGTGAGAAGGACTTTA
TTAAAAGAAGATCACACTTGTTTTTCATTGACAAGTCGTGACAATGTAAA
ACGGACATTAATACCAGGCAGTGAATCTGAAGGAAGCGAGGTGCAAGATG
AATTGACCGGTTTACACGATGACCTTCTTGAAGAATTGAGTGATGCAAAA
GATGTCATGCAACAGCTACAAACCGTCTTGATGAACGGACGAACATCGGA
AGAAATGTTGGGATTAGAATCTCCGCGTGATGAAAGTTTCCAAGAACAAT
TGGTTGTGAAAAATATTATGTTAGAACAGATTGAGAATGAATGTGCTGAT
TTAAGgCATCAATTGAACGAATATAAAGAAATCAATATGCGACTGACGAA
TGAAAAGCATGGCGTTGAACTCCGTTTCTCACAACAAGAACAACTCATCT
TATCGCTGAAATCGAAACTTTTAGAACACGAACAACCTAACGTAAAGAAA
CAAAGTGAACAACAATTACAAGCATTGCTAAGCGAGAAAAATAACGAAGT
TCAATTGCTGTATGATGAGTTGAGTAAGCGAGACACAATCattgaaaaac
ataaaaacgaaCTGGACTCGATGAGTAATGATATTGTCAACAAAAAGCGC
TCAGAGgcGAGCTTGTATGCCAAACTCGAATCTAGCGAGTCTATGGTCAG
CTCTTTACAATTGCAGCTTCATGAAGCCACGGAAAACCTTCATCTCCAAG
GCAACAATACCCAACAGCAACGTAGCAACAATTTTCGTGTCCCTCAACAT
GAAACTGACACAAATACCACGAAATTACAAGATGCTAAAATACATCGAAT
TAAACAAAAGATCACAAGAGAGCATCACAATCTATCGACCACGTTGAAGA
AtattaaagggaatttcccaagtAACGATCCAGTTCAACATGCATTCCAA
AGTATCGAACACAGCTTATCATCTTTGATGGATTCTGTCTCCATGTTAGA
TGTCACCAAAACTCAACAAAAAACACAACAAGGACAATATCCCTCAAATA
AACCTCAAACGATAAATTCAAGCTCTCATAAAAAACCACACAAGACTTCT
GACCAGTATCAAAGGTTATCCTTACCTAAGCATCATTCATCACGATCGAC
AAGAACTAAAAGTAGCATTTCATCTGATTCAGGTTATGACCACACAAACA
CAAACAACACACTGGATGCATCTGAGCAAGtcaaaattgtttattttctc
GGCAAATCTGTTACACCCATACTTAAATCAAGTGACATTGGACTTGGTTA
CTTAACGTTACATGATTTCAAAGAGTTGGTTAACAGACCAGGAAAATATC
GATATTTCTTCAAATCGAAAGATAAAGATTTTGGATTTGTCAGAGAAGAG
TTGCTATATGATGAAGACTTGGTCCCTGGCTATGAAAACAAAATTGTCTC
TTGGATTGAGAAGTTATCAGTAGAGGAGGTTTGAGTCTTTCTCCGAAGCT
ATAATTACAATTATTAATTAtaattatttatattttcttacCAAGAGTGT
TTGTTTTAATttatattttggtcaatttaaatttttaacgGATTTTACAA
TTAATGActgataactttatttatttttcttatttttgtaaTGTATATAG
AATAATATTATTAACAATTAATGCAGACTGGTGGCCTTGTTTGCTCGGAG
CTTGTTCGAAGGGTTTAGAGGGGGTAGATAACGACTTTCTGAAATGAATG
TATTTTGGGGCATTTTGGTCCCGATGATATCatcaaaacctaaaaatttG
CGATATCTGCAAGAATTGACCTGATTTGCTCGGTAAAACGAAAGAATCTC
CTAGAACAATGCGAAATTGATGTCAGTTAAGTGAAAATTACCCTTCGATG
ACATCATTATGGATCagtatgacgtcataaaacatatatatagtgaagat
atgtaatatctgtcattttagaaaaagaaaagtattgatatataaataac
tcaaactgataaaaacgaaaaaagttaagggtatttttgttaattgtgtg
catttacgatttttttggtatttattattttttaatcattccgaaacaga
gggtaatttagcaaaaagttaaagggaatttaaatagtggtatgtgaaag
aaaaacctaatccaaatgaagatagaagaaaagtaatagtggagaaacaa
tgaattgcaaaaaacttttttgataaatacacTTCCTTAAgttcaaaata
catacaaaatggggacaaatacaaaagcaaac
Run BLAST on NCBI

transcript from alignment at scaffold_234:187994..201484+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053801 ID=TCONS_00053801|Name=TCONS_00053801|organism=Clytia hemisphaerica|type=transcript|length=13491bp|location=Sequence derived from alignment at scaffold_234:187994..201484+ (Clytia hemisphaerica)
TGATTATATGCGTTTTACAGTAATATCGACTTTCTGTCTTCTCTTTCCTC ATTTTTGACGAAAGTCGGCAGAAAATCgactgtctaaagtcaatgcgata ccttcttttgacgtcaatgcaatgaattgttgtatctttttcaagcaaag atttgaaACTGCCGACTTTCCGTGGATCTTCTCCCGTCTCACACATTGAA AGGAGTTTCCTTTACAACGCCATACTCTCTAGGCTAGACTTTCCATCGCT TAACTTCATGAcagataaaattttttgattggcttaaattTATACACGGT TCTCTATATCTCTTTTTTGTCTCTTTCATTCAGATTATGAACCAATCGGA CTCGTACATCACTTGGGTGAACAGTCAactgggtaaacgagacaaaagtC GTCACGTGAAAGATCTTTCCAAAGATATGAGGGATGGTGTGGTCTTCTTG CAGCTGGTTGAAGTCATTAGTAAGTTTAAAAGTTTATCCAGTCAGCACAC AACCCTATTTCAATGTTCCTGCAAGGTGTTTAGAACGCTTAACTTTAAAG GGGGGGggagtgacgaaattttccccgcCGAAAACCCTTTCTGCTCAACT TCAAGGGAGCTGtgacaaagattttccaaaaagttactAAAATTTCCTGA TTTAAATTTTACCGCCGACAAAAATTTTAACCGACTAAGTTTTCCTGTCA AAGGTATTATCTTGACGTttatattttggaatttttgtgcCAGCCCAGTG CTAAAACTGTCTAATGCCATAAAAGCTAAAATAAACTTACTTCACAGGac tgtaactttttatctaaGAAAAATACGGAAAATCTAAGCACATattaaaa aatttgttcaaaagttCTATAAAATATCATgtcaaaatcttcttttttta ccctacttcatttttcaatttttcaaaagtttttaactttttacatTAGA CACGACACGCTATAGTAAATTTGAAACGTGCTTagggaaaaaaagttaaa ctcgtgtgaaaatatctttccaacggtgtatatcGTTTTAATATATCGGA GCTggaaaagtgttaaaaaatgtttgtctttTGAGACAGAAATAAGGTAT ATAAAAGGCAAAGTTTCAGTCTGGGGATGGTGATTTTACATAACCACTCA CTAATGGTGTCATTGTATTTCACTTTCGTACGTAGGCGATTCAGAGCAAC AAATATTGGATCATTCACAACTTTCGATTAACGATATGCGATACAACTTG AACAACGTTTTGCAATTCTTATCCAACAACAATGTCAGGGTTCACCACAT CTTACCAAAAGGTCAGTATTCCATCCAAAGCAAAATTTGTGATAGACAGT TGTACGAGCTTTGCACTATTTTTAAGGTCAATAGTTGGtcttaacttttt caaagaTCTTATAAGAAAGATGAGAGTCAATAATACCGGGGAATCACCCA TGCCTTCTTAAATACTCAAAAACTTTCCTTAGGTAGTATATAAGATTGCT TTAacagtattcatgatatgcatcactggagagtcttccgagaaagtttt caacccaatacgtcacttaaataATAGAACAAGTGCATACCATGAATAGG TTACGTTACGTTACGTTGCGTTATGAACGCTAAAATATAGACGTGTTGTG TTTTACTGGTATGACATCGGCACGTTAACATTGTTCTTATTTCCCATACA AAGTCTTACATGTCATTTTCAGAAATCATCGAGGGAAATCTAAAGACCAC CATGAGATTGATTCTCGCCCTTGCCGCCCATTTCAAACCAGATTCCTTTA ACTATAACGCCCTAAACAATAACACGAGTACGCCCTTAAAGACCAACACA AGTACGCCCGTCAGTAAAAGCACGAAGAAGAAATCTATGCAAAGAGCACC ATCACTCGTTTCGCTCGCTTCAGAAGCGGCCGCTTCACTAGCTGAAGCGA GCAAAAATGCGTCGAAAGGCGGGTCGACTTCAAGAAGTAGCAGAATCAGG TATGTGATTAAATAAAACGAcctaaaagaattaaaatttgcCTCTTAACC TTTCCAACacgcaacattttttgaaaaatgtgtaaatttccaactttttt ttttaaatctaaaatttcaaattggcataaaagTTCAGTTGTAACTTTAG AGTTAGACAATGATTTCGGTACCGTAAAAACCTTTCTAAAGTCTAGTCTG GGACTCGGTATTTTGGCGAATTGAAAATGTCTATAAACGTCTGCCGGGTC TGAAAGTGTTAACACTTTATTTGACGCCGGATGCAGAAATTTCTTAGTGC TCCTTTTTTTCCCTTCTACCAACCGTGAAGATTTTATGGCGCATTTGTTt cttactttttcaaatttcaatcaaatacCACGTGTGGGCTAACATCAATG AAAGCTCACGCCATAAACTGAtataatgtaaaaattttatgagttggttc aaaaatatttcacagcTGGATATAGACTAGAATATTTTTCCTGCTACAGG CAGAAAGTgcatacttttttttataagaaagtattttttccTTCTGTCAC TAAaagcaatttttggaaaaacttttcAGGGCTTTCCATATTTAGAGCTG AAATTATAAAATACTTTTGGAAAACTTTCAAGGGCTTTTTTTCAATTAAT CCATatatttttagctaaaaatatgaaatatttgtGACCATCGATAGTAG TTATCCACAGATATACTTTTCCAGATATTTGAGGTCTTTCAATTTGACGT AATATACTTAAATTTTcgtataagaacatttttacttTCAAACCAAAAAC ATATTTTACAAACAATAAATTTTCCTTGTAGTTATATCAATATCATATAG CTATAATatcagttttcttaaaaattcaaacATCACTTATATATTCAAAC ACATCATTCAACGACAGGTTTTTCTATCATTCAAAAACCATCTCTCTTCG TCTCCGCATACGGATTAACTGTTAAAATTCCTAAAACTTTCTCACATata tataaaaaacttttttaagactaaatttttattcaaactgTTTTAAAAGC TTCATTGGTGGGATAAGACAGGATAAGAGGGTGCTATATATTGATGGGAC AAATATATGtttcatattttgaaatattttgatgataatTGTTGATTCAT TGATGTATTTTTGTTTGGAAACCTCTTTTCGTTTCGAACATCAAATTCAA AGGTACTACACTAATTCATTGTTTTccaaatgacaaaaaaacaatgCTGA ATTTTAAGACCCTCTTCAGCCAATAAAATAAGCATTAGAACAATGTAAAC TACGAAGTAAAAACACCCCAGTCACAGCCGAAATTTACAAGAAAGTTATT TCAGCGCtatatttttctctattttcccTTTAGGAAGCAGCAATTATTCG ACAGCGTTCCACCGAAAACAAAACATGTATCTCAACGCCACCAGCAATCG TCCAATCAGTATCAAGCTTCCAAAAGCTTCACAATGCCTTCATCATCTTA CCACAATCGGTCAGAATCAACACCCCCACCCTTTGAACGCCCAAAAACCT TAAGAGGTGAAAGTTGCAGCGCCCAAACTCGCCCTAAATCATTAAGACTT GAAAACACTCAAATCCCCGACTTACCGAAAAATGTCTTTAAACCGATTCG GAATAGTAGAATTTCCGTAACGGAATTTCCAACGGATGGATCAGAAATTA AAACGAAAATCTCAACTGAAGCTTCAtcaacaaacattgaaaatgTAAAA AGGGCTTTATTACTAGAAGATAAACTATTACCTTCATCGAAAAGTACAGA TGTTGATAGTGTGAGAAGGACTTTATTAAAAGAAGATCACACTTGTTTTT CATTGACAAGTCGTGACAATGTAAAACGGACATTAATACCAGGCAGTGAA TCTGAAGGAAGCGAGGTGCAAGATGAATTGACCGGTTTACACGATGACCT TCTTGAAGAATTGAGTGATGCAAAAGATGTCATGCAACAGCTACAAACCG TCGTAAGGATCTTCATAGAAAATgttttcccagctggcacacaacgttgt gtgtcagctgggttgtAAACTCTTTCTAAGCCAAACagcacacaatgttg tttcaacgtatAACTAGAATTCAACATGAATGTTATGGCCGTGAGATTGA CGTTACTCAGACTTTTAGTGTCATGTGATAACTCATTTTTCCACCTAATT AGCGATTAGTGATTTGAAGCATTTGGTTTAGAATGGGTCAGGCCGTTTTG AAAGCCTTTAGCAAAAATCATGTCTGAAAATCAGCGATTCAATTCTGGTG ATTCTGTTTAGAATAAAGAATCATATTTTAGATTATCGTGGACCTGGCAC AAAACTTACAGTTCCAAAATATTGAGCTATGTTTATAAACCACTTTTTAA ACCAATTAAAAGATAATGTCTACAGAATAATACAATGCAGACAGGTCCTT TTATATTACTCCATATCATATTTTATGCAGTTGATGAACGGACGAACATC GGAAGAAATGTTGGGATTAGAATCTCCGCGTGATGAAAGTTTCCAAGAAC AATTGGTAAGTTCATTCGTGATGTGCGGTGGCaagttgaaatttgaaaaa gtttcttctGGTGGAACATTAATAAATCCTTTTAATTCAATCAGAAAGAT GCCAATTTTGGTCAATTACTTTTAAAACTTTCGGGTAAAACTTTCTATCG CGGGAAAACGCCttcgttaattttttgaaaatctttgcaaGAGCTTCTAT CGTGGTTCTAATTAAATCGCTACTTCAACGGGCTAGTATGTACACTATTA GTAATTTCTCCGTACAATAGCCTATTCGATTCATACACTGATAATTATTG TCATTCTTTTATATATCTTTTCAGGTTGTGAAAAATATTATGTTAGAACA GATTGAGAATGAATGTGCTGATTTAAGggtaagaaaaatgttcttgTTTT CCCTCTGAGGATACAGTGCTAAACCTGTAAATCAAAATTAACAAATAACC ACGTGACCAACTTTTATTCAGGTACTTTCCATCAAATCCACTGACCCATT CATTCATtcctattctggtctgtaaaataccaactagACAGGGTGGCTGA ACCAAAATTTTACAGATCATTAGGTTCTATTGTATTTTGCACTTGTAATA GAAAGTCACTTTcaacattttggaaaattgttaacTTTGTGACTTCATTT TCAGCATCAATTGAACGAATATAAAGAAATCAATATGCGACTGACGAATG AAAAGGTACCCTTGTTTTCTCATAACATTTCCAGTTTAGGTTATCAATTT CTTGAACTTAAAGGtcttttgttaaaatttgtAAAGAAACTATCTGGAGG GGGTACCTATAGGTAAAGTCCCAATAAGGGGATGTATTGGTTTGTCAGGG TACCAATTTTTTACCTTCACGGAGTCCCAACTTGCAATATCAGGAAAATA TCATCATTTCATATATTCGTATAtttcatagttttgaaataatttcCTAT CCATTCCCTATCCATCTGTGCATGAAGCTTTTGAAGTTCTTCTCGCTTGT TACATTCACTAACCTTGACCCCTACTCTCTTTCTGTTCTCCATAGCATGG CGTTGAACTCCGTTTCTCACAACAAGAACAACTCATCTTATCGCTGAAAT CGAAACTTTTAGAACACGAACAACCTAACGTAAAGAAACAAAGTGAACAA CAATTACAAGCATTGCTAAGCGAGAAAAATAACGAAGTTCAATTGCTGTA TGATGAGTTGAGTAAGCGAGACACAATCattgaaaaacataaaaacgaaC TGGACTCGATGAGTAATGATATTGTCAACAAAAAGCGCTCAGAGGTAGGA ATTCTTGACAGTTCGGCATGTTGCATAGTTCCGCAGCTCTGTGAAGGTGC TCTGTGATTTGAAATTATGAACACCGACCAATTTTCTGTTCGTCACCCTT CGACCCTGTTCTTAGTACAAAAGTAAGCTTTGTTAAATTTTGTAACCAAA AAGCTGCGGAATTCGACAACGTTGAGGAATTTTACAACGCTTAAATTGCA GAATTTCGCAGTGCTGCGAttcaatacacaggttgcaaaattaaagtctg aatacaaatcacgcttttacttgaaattttgatgtgcttgttacatgata tttatttctgattggttcgaatttattgacactaataaagctATCAGCTG TTAGTTGtaaagtaacatgggaataaaatcacgtgaactttttcgagtaa tcacatgttttgactttAGTGATAtcattttgcaacccgtgtattcaaTT TCCCGAACTGTTGAGGAGTGAAAACACGAGAAATGTTGGTTCAATGCAAA ACACTCCATTTGTAATAACAAAAGGAAAACCCGTTTCGTTTTAAGTGAGC GGTAGAACTTAAAACTAAAATAAGATAAGAGACAAATTTGAGAGAAATCT CATCCAACGTTAAAGAATTATCGCCTCATAACATGGGTCCCAGCTAGTGA TTTGCGTGATGACGCGACAATTTTCTGTCCGTTTTCTGTCCAAGTTTATC TGGTATCCTAATAGCGGATTGGTGGCCGCcaacgctaaagctctaaagga gtaGGCCAACTTGCCATCGGAGTAGAATGATAGATCATACTCGAGCTTTG ATGTGCCAAATCCAAAGTCTGGCTCAACTATTCTAGCGCTTAAGCCTGAT AATTTTCAAGCCATCCGCTACAAAATCTGTGACGGCTCGCCAGACGGCGA AATTCCATAATCTAAaacttccagatgttgaaaattctcccgtccttcag agctttagcgtgttggAAGAAATTTCTGCATCAAGTTTCAGTTACGTTCA AGATTGAATCAGCGAGAATTAACTGTtcacatttatttttttttttcaca ggcGAGCTTGTATGCCAAACTCGAATCTAGCGAGTCTATGGTCAGCTCTT TACAATTGCAGCTTCATGAAGCCACGGAAAACCTTCATCTCCAAGGCAAC AATACCCAACAGCAACGTAGCAACAATTTTCGTGTCCCTCAACATGAAAC TGACACAAATACCACGAAATTACAAGATGCTAAAATACATCGAATTAAAC AAAAGGTCAGATCTGtttcaaaattgtttcataTGTACCAACTCCaatac ttgaaattttgaagttaaTCATCGGACGATTGGCGAGAGATACATTCCAA tacacagatttctgtaaagtcCGAAGATCTAGATAAATGGAGTGCTTTGG CTGAGAGTgcgccgtggttaggtaggaaattctacctaggtcacgtgata ttacaatagaattcctgcgcttgaccaatcagaaggatggtgggttttcg aaaacaatagcaacaacaTTTTTGCGATGCtcacttttttgcttggaaaa gcttaaagcACGTCATCTAGCCTACAGAAGTCTGTGGATACAGGAGCAAT TATTTTCGACTGCGTGGAGTGTCAAGATCTGTACGGAGATTATAGATGAC GAAAGTTTAGACTTTTTCTTCGTGTGTTAAGAGTTCGTGTTCAAGTTCGT GGGGAAAAttgtacagtagagtctctttaactcgaacctctataactcga ttgTCCCCTTGACTCGAACAAGTTTATCGCCCCTTtaattaacaatgcct tataaattTTACTCCATAACTCCTGGAATCGAAAAAATTTGTGTTCTCCG TGCAAGCTCGAGTTATAAAGACTGAACTGTACTCTAATGTCATTGTGTGT CAAGTAGAGAATTTGTGGCAAAGATTATATTTTGCATAGTTTTTAAGAAC TCTTATTCAATATTATACAGATCACAAGAGAGCATCACAATCTATCGACC ACGTTGAAGAAtattaaagggaatttcccaagtAACGATCCAGTTCAACA TGCATTCCAAAGTATCGAACACGTGAGTCAATATCACCCATAATGCAACA TCCTTTTGTTGTTAGAAATCCGTAGTGCTTTTTAACTGAGACCAAATCTG CAATACAGATCTATCTAACATATACAACTAATTCTTGaaatgcgtaagtc aagattacgtcatttttcctatcagAAACACCCAAAAACACCGGAATTTG ACTAAAAGTAGCAACACATTGTTTGCTTATAGGTCAAATTCTGGTGTTTT CGGATGCCGGGGGGGGGCAAATAGGTTACGAggatgcgccgctggtcagg gtaccttttttaacctctttAAGGTAGGGtaggtcgcaaaaacaccaaaa tagaaaaatcagtccctcgtaggatGGCttgtttggaaaatttggggaaa aaagtagaaaatttgagaaaattttggaatttcagtcccattcagggtca ctttatTCGCAAATTTccgcaattttttgaaaaaatgagtcccacgtagg gtctatttttcgaacctcagcggagttCCCTTGttggtcggcaagggtag taccacccccccccccccggggttttttaaaaaaaaaaaaaaaatttttt ttttattttgtgtttttaaaaCTATGCATCTTGTTTTATCCTTATtagaa acccggggggggggggggggaccccccccccccccccggggttttttaaa aaaaaaaaaaaaattttttttttattttgtgtttttaaaaCTATGCATCT TGTTTTATCCTTATtagaaacccggggggggggggggggacccccccccc ccccccggggttttttaaaaaaaaaaaaaaaattttttttttattttgtg tttttaaaaCTATGCATCTTGTTTTATCCTTATtagaaacccgggggggg ggggggggaccccccccccccccccccgggtttctgatacgaaaaatgac gtaatcttgacttaagCACATCAAGAATATCATTGAATTTTTTATGATCA ATGTTTgccatattgataaaaaatattttttatctttttactaTTCTATA GCACTGATAATGGAAAGACCGAAaagctttttctaattttaaattgttgt tgttttttattaataTCATTAAAGTCTTTGAAAACCTTTAGAAATTATAG GAAAAGCTGTTTGATAATCTACTCGATTTTTCTGTTGAAAGCTGTTCTTG ATGGTTTATAATTTATcccaacccagctggcacacacaacgttgtttcaa cgtttatctaatgtgcataacgtccatatgacgttagatgaacgttgaaa caacgctgagtgccagctgggaatagatattaatttcattaaattacATA CAAAGTTCTTCTTAATTTAGAGCTTATCATCTTTGATGGATTCTGTCTCC ATGTTAGATGTCACCAAAACTCAACAAAAAACACAACAAGGACAATATCC CTCAAATAAACCTCAAACGATAAATTCAAGCTCTCATAAAAAACCACACA AGGTAAAaattcagatgagatggagtttttataagatactttaatgggtt taataattggtcatttgaagtaataaaaatgacgcgttctttagaaaaag taacaaaattgttttattactggtttaACGactaaccaaatcaaataaga gatTGTAAAAACTTCAGCTTGTCCCTAAAAATCATTATTCGATTTCTTTC AcgctttttatctttttaatcGTTGATGCTCGAGATAATAAAATGGGGCT CGTTCCCAGCAAAAAGATtaaccatttttcttttcgttcaACGGTTTAAC GGCTTTAGTTTAGGGTCAGATTATTGGAGGGATTGACCTTGACGGCCAAT GGGGATGTGCTGACTGGAGTTTGAGAAATTGACCCATATGATTATTGCTA AACTTTGGACCCTTTCAgaacaaaaaatcgaaaattgttCCCTTTTTCCC TGataagtggcaaaaatgacaaACAAACAGTAGACAAAAAACTCGAAAAT GGAacaatttccaccctgaaaatcgtccaaaataaccaaaattcgacCCT ATCAGATAAGATACGCATCTTGAAAATAAGTAAATTTggaaccctgtcag atatcgTTAGAACCTAAAAAAGGGGCCCTGACCAGCGACAcatccccgta cccaattttccTAAGTGACCCTAagtgatggttttggagtgcaatttttt attACCAATGGGGGTAAGTAACATCACAAGGCAATTAAATCTTCGGGTTT TTTCCAACGAGGACGttattttggcctatttttcagTGGGACTGGGGCTC AAACGGGTGGTGGAGGGTGTATCCATTAAGAAAATGAATCTAGTCTTGCT AGTCCTAATATTTATCATATCTCTTTTATAGACTTCTGACCAGTATCAAA GGTTATCCTTACCTAAGCATCATTCATCACGATCGACAAGAACTAAAAGT AGCATTTCATCTGATTCAGGTAATTTTATTGAACAAAACGTTCACAAGAG ATCTGACATTTTTTACACTAGTTCATTTGAGATGCAAATATAATTCAAAC GGGTATACTCGTGAACCTTAAAGTCGTTTATTACCCACTTTATTTCAACA ATCgtaaaaaagttaaagtaaTTATTCTCAGGTGCCTGATAAACAGGGGG TTGGGAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNGGGGGGGGGAGTGGAAGTAGTACCTCTAAATACGA TATCACtcttaatttaaaaacaaaatctttaatgcATAAATTTCTGACTC TTTTGTATAAGGGAGTGTGTGGTGCACGTTTGATTCACTTTTACAGGGTA AAAATTCAGtcgttttagaaaaaaatatatttttttaaaatgacCCAACT TTTCAACCTTTCCTACATCAGGTTATGACCACACAAACACAAACAACACA CTGGATGCATCTGAGCAAGtcaaaattgtttattttctcGGCAAATCTGT TACACCCATACTTAAATCAAGTGACATTGGGTAAGTTGAGCTTTCAGTAT GAACTGATCACTTGGTCGGTAAAGTATAGTTGTGcactaaaggccggtct ccactttcgcgtgaaatgagcgaaaactttttagcGTTTTTGTAATGTCa ctggtcggttgaaaaatgaagcaattccattggtcaaaattgacgtaacg attgaaaaaagttgaactttcttcaactttttttatgcACTGTAAGAGTG GAAattcaagcaattttttttgctctcaaagagttgaaatttgacaaaaa tgcgtaagggtgtgattctaaaagccaatttttcgCCGCCAATTCCCTCA GTTgataaacccactgcccccggACGGTTGTCTATCACACTAAAGGCTAT GGTTGGTCATTATAGTGTTtttagaaatatgaaaaattttgaatttatct tTTTGAAAGCTTGAAATTTTGGCAAGAGATATCCTTGGGATACTTTGGCG gagattaaatttggcgaattttgcgaattttgccaaaattcgccaaatta aatcctcgccaaaatttccaaattcggcaattcgccaaattaaatccccg ccaaaaattgatttttggccgaacgccAAATTAagtccacgccaaaattt atccacttacaCAAAATATCATAAAGTTTCACCCCAAATATTTCTTTCCT ACCGTTAAATGATATCTTCTCTTTCATTACAGACTTGGTTACTTAACGTT ACATGATTTCAAAGAGTTGGTTAACAGACCAGGAAAATATCGATATTTCT TCAAATCGAAAGATAAAGATTTTGGATTTGTCAGAGAAGAGGTAAATTAT TtcacgttttgtataagattccacATCCTACACTAAGATTTCTCTgtcat tttctttcgaaaaagttAGTTGAAAAATGAGATCTGGAAAGTTGGGCAGT TTCGTGAGATTTTCCGTAACTTTAGAAAAACACTTTTCCACTCAAATTTT GGTTATTCTGGGAAAAATAACGGACAATCTGGGAAAagtaaaatcataaa aaaagagaatCTTAGTGCGGGGAGTGAAGTCTTGTCTGCTTGATTGCTGT GACTTTAATAGTCGGGACCACTACATGGAAAAGGCAACTATtaccttaac gggaaatatttcccgaacagTAAGGTGGCGAAAACTTCCCAACTGTTTAA GCCTAAAACTATAAATTGCCGCTAACTACTCTAACTAACTCTTCTCCTTT ACTCTCTAGTTGCTATATGATGAAGACTTGGTCCCTGGCTATGAAAACAA AATTGTCTCTTGGATTGAGAAGTTATCAGTAGAGGAGGTTTGAGTCTTTC TCCGAAGCTATAATTACAATTATTAATTAtaattatttatattttcttac CAAGAGTGTTTGTTTTAATttatattttggtcaatttaaatttttaacgG ATTTTACAATTAATGActgataactttatttatttttcttatttttgtaa TGTATATAGAATAATATTATTAACAATTAATGCAGACTGGTGGCCTTGTT TGCTCGGAGCTTGTTCGAAGGGTTTAGAGGGGGTAGATAACGACTTTCTG AAATGAATGTATTTTGGGGCATTTTGGTCCCGATGATATCatcaaaacct aaaaatttGCGATATCTGCAAGAATTGACCTGATTTGCTCGGTAAAACGA AAGAATCTCCTAGAACAATGCGAAATTGATGTCAGTTAAGTGAAAATTAC CCTTCGATGACATCATTATGGATCagtatgacgtcataaaacatatatat agtgaagatatgtaatatctgtcattttagaaaaagaaaagtattgatat ataaataactcaaactgataaaaacgaaaaaagttaagggtatttttgtt aattgtgtgcatttacgatttttttggtatttattattttttaatcattc cgaaacagagggtaatttagcaaaaagttaaagggaatttaaatagtggt atgtgaaagaaaaacctaatccaaatgaagatagaagaaaagtaatagtg gagaaacaatgaattgcaaaaaacttttttgataaatacacTTCCTTAAg ttcaaaatacatacaaaatggggacaaatacaaaagcaaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033951XLOC_033951Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053801-exon-scaffold_234-1491911889:187994..188012TCONS_00053801-exon-scaffold_234-1491911889:187994..188012Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:187994..188012TCONS_00053801-exon-scaffold_234-1510915933:187994..188012Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:187994..188012TCONS_00053801-exon-scaffold_234-1575043694:187994..188012Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:188327..188462TCONS_00053801-exon-scaffold_234-1491911889:188327..188462Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:188327..188462TCONS_00053801-exon-scaffold_234-1510915933:188327..188462Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:188327..188462TCONS_00053801-exon-scaffold_234-1575043694:188327..188462Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:189179..189304TCONS_00053801-exon-scaffold_234-1491911889:189179..189304Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:189179..189304TCONS_00053801-exon-scaffold_234-1510915933:189179..189304Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:189179..189304TCONS_00053801-exon-scaffold_234-1575043694:189179..189304Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:189716..189992TCONS_00053801-exon-scaffold_234-1491911889:189716..189992Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:189716..189992TCONS_00053801-exon-scaffold_234-1510915933:189716..189992Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:189716..189992TCONS_00053801-exon-scaffold_234-1575043694:189716..189992Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:191377..191995TCONS_00053801-exon-scaffold_234-1491911889:191377..191995Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:191377..191995TCONS_00053801-exon-scaffold_234-1510915933:191377..191995Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:191377..191995TCONS_00053801-exon-scaffold_234-1575043694:191377..191995Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:192474..192548TCONS_00053801-exon-scaffold_234-1491911889:192474..192548Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:192474..192548TCONS_00053801-exon-scaffold_234-1510915933:192474..192548Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:192474..192548TCONS_00053801-exon-scaffold_234-1575043694:192474..192548Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:192868..192921TCONS_00053801-exon-scaffold_234-1491911889:192868..192921Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:192868..192921TCONS_00053801-exon-scaffold_234-1510915933:192868..192921Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:192868..192921TCONS_00053801-exon-scaffold_234-1575043694:192868..192921Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:193198..193248TCONS_00053801-exon-scaffold_234-1491911889:193198..193248Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:193198..193248TCONS_00053801-exon-scaffold_234-1510915933:193198..193248Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:193198..193248TCONS_00053801-exon-scaffold_234-1575043694:193198..193248Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:193589..193837TCONS_00053801-exon-scaffold_234-1491911889:193589..193837Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:193589..193837TCONS_00053801-exon-scaffold_234-1510915933:193589..193837Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:193589..193837TCONS_00053801-exon-scaffold_234-1575043694:193589..193837Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:194895..195098TCONS_00053801-exon-scaffold_234-1491911889:194895..195098Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:194895..195098TCONS_00053801-exon-scaffold_234-1510915933:194895..195098Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:194895..195098TCONS_00053801-exon-scaffold_234-1575043694:194895..195098Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:195814..195915TCONS_00053801-exon-scaffold_234-1491911889:195814..195915Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:195814..195915TCONS_00053801-exon-scaffold_234-1510915933:195814..195915Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:195814..195915TCONS_00053801-exon-scaffold_234-1575043694:195814..195915Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:197264..197395TCONS_00053801-exon-scaffold_234-1491911889:197264..197395Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:197264..197395TCONS_00053801-exon-scaffold_234-1510915933:197264..197395Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:197264..197395TCONS_00053801-exon-scaffold_234-1575043694:197264..197395Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:198275..198362TCONS_00053801-exon-scaffold_234-1491911889:198275..198362Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:198275..198362TCONS_00053801-exon-scaffold_234-1510915933:198275..198362Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:198275..198362TCONS_00053801-exon-scaffold_234-1575043694:198275..198362Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:199265..199373TCONS_00053801-exon-scaffold_234-1491911889:199265..199373Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:199265..199373TCONS_00053801-exon-scaffold_234-1510915933:199265..199373Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:199265..199373TCONS_00053801-exon-scaffold_234-1575043694:199265..199373Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:200076..200184TCONS_00053801-exon-scaffold_234-1491911889:200076..200184Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:200076..200184TCONS_00053801-exon-scaffold_234-1510915933:200076..200184Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:200076..200184TCONS_00053801-exon-scaffold_234-1575043694:200076..200184Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1491911889:200603..201484TCONS_00053801-exon-scaffold_234-1491911889:200603..201484Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1510915933:200603..201484TCONS_00053801-exon-scaffold_234-1510915933:200603..201484Clytia hemisphaericaexon
TCONS_00053801-exon-scaffold_234-1575043694:200603..201484TCONS_00053801-exon-scaffold_234-1575043694:200603..201484Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:187994..201484 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 1.08385e-07 0 0 0 0 6.87891e-08 1.38148e-09 0 0 0 5.08723e-08 6.82126e-10 0 4.86826e-08 0 2.58948e-10 1.18998 0.00114023 0.00018044 1.66514e-07 1.78998 0.000229081 2.7365 0.101924 0 0.0264613 1.66405e-08 0
Blast
BLAST of TCONS_00053801 vs. Swiss-Prot (Human)
Match: DIXC1 (Dixin OS=Homo sapiens GN=DIXDC1 PE=1 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 4.851e-23
Identity = 49/123 (39.84%), Postives = 79/123 (64.23%), Query Frame = 2
Query:   29 QSDSYITWVNSQLGKRDKSRHVKDLSKDMRDGVVFLQLVEVISDSEQQILDHSQLSINDMRYNLNNVLQFLSNNNVRVHHILPKEIIEGNLKTTMRLILALAAHFKPDSFNYNALNNNTSTPL 397
            Q  +Y+ WVN+QL KR   + V+DL +D+RDGV+   L+E+++  +   +  S  +  +M+ N+  VLQF+++  +R+H    K+I++GNLK+ MRL+LALAAHFKP S        ++  PL
Sbjct:   22 QLQAYVAWVNAQLKKRPAVKPVQDLRQDLRDGVILAYLIEIVAGEKLSGVQLSPGNQQEMKNNVEKVLQFVASKKIRMHQTSAKDIVDGNLKSIMRLVLALAAHFKPGSSRTVNQGRDSRAPL 144          

HSP 2 Score: 85.8853 bits (211), Expect = 6.017e-17
Identity = 37/91 (40.66%), Postives = 63/91 (69.23%), Query Frame = 2
Query: 2141 HTNTNNTLDASEQVKIVYFLGKSVTPILKSSDIGLGYLTLHDFKELVNRPGKYRYFFKSKDKDFGFVREELLYDEDLVPGYENKIVSWIEK 2413
            H+ ++ T+ +S   K++YF  +S+TP + +    L  +TL DFK  ++R G +RY FK+ D +FG V+EE+ +D+D +PG+E KIV+W+E+
Sbjct:  589 HSQSSPTV-SSTCTKVLYFTDRSLTPFMVNIPKRLEEVTLKDFKAAIDREGNHRYHFKALDPEFGTVKEEIFHDDDAIPGWEGKIVAWVEE 678          
The following BLAST results are available for this feature:
BLAST of TCONS_00053801 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DIXC14.851e-2339.84Dixin OS=Homo sapiens GN=DIXDC1 PE=1 SV=2[more]
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