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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053754 ID=TCONS_00053754|Name=TCONS_00053754|organism=Clytia hemisphaerica|type=transcript|length=994bp
ATGGGATTCAAAAACCAATGAAACCTGGCGGCTATTCAGATAGTGGTGCC
GATATTGCTTACCAGCTACAGAAGTTTAAAGTACCTATCATCACTGCTAA
CTCTGTCCCTTCAGTGGATCAAGACTTTGATTGGGTGTTTCCGGACAACA
AGGAAGGAATAGCAGAAGCTTTAAAGAAAGGAGCCACTTGTTTTTGGTTG
AATACAGTGCTTTATAAGGGACACCCTGTGGAAAGCTTCTTCGGGAAAGA
TATCGAGTTTGTTGGTCAATCACCGAACAATTTGGACAAATATGATGATA
AGATGTTGACCAGTGGATTGTTGAAAGCAAATGGACTGTCAGTTCAACCT
CAAAGACTTGTTTCAATCCAACAGATGTGTGATTTACCACAAGATTTCCA
TTTCCCATGCATCATTAAACCAGTTCGGGGACGAGGTAGTCAAGGAGTTG
TTGTGGTTCGAAATCAAGAGGAAATGAATGAGCAGTTGAATCGATTGTTT
TCAGCCAAAGAATTCGGCAATGCTTTGTACATTGAAAACTATCTTGAAGG
GCAAGAAATCACTGTTACAGTCATGCCTCCTGGTAGATACTTCATTGGGA
ATAAAACAGTGGAAAAAAGTACACCATGGTCTTTGCCAGCTGTGAAACGA
TTCAACCATGTCAACGGAATCGCACCTTCGAATGGCGATGTTGCTGTCTC
CGAGAACAGCTCCGTCCTCGAAGATCATGAACTAGAATCAAAAGAAATCC
AAATAGTATACGCagaatgtgaaaaagcttttaGTTTGGTAGGCGCCAGG
GCACCCATACGAATCGACAGCAGAGCAGATGAAGAAGGCAAGTATTGGTT
ATTAGACCTCAATATGAAGCCAAACATCACAGGAGCTTGTAGACCTCATC
GACAGAACCAAGATAGTTTGACGGCCATTGCAGCAAGGAAAATCGGATGG
AGTTATGGTGATCTTTTAATGAACATTCACCAACAAAGGTGGAA Run BLAST on NCBI transcript from alignment at scaffold_233:893503..894496 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053754 ID=TCONS_00053754|Name=TCONS_00053754|organism=Clytia hemisphaerica|type=transcript|length=994bp|location=Sequence derived from alignment at scaffold_233:893503..894496 (Clytia hemisphaerica)
TTCCACCTTTGTTGGTGAATGTTCATTAAAAGATCACCATAACTCCATCC
GATTTTCCTTGCTGCAATGGCCGTCAAACTATCTTGGTTCTGTCGATGAG
GTCTACAAGCTCCTGTGATGTTTGGCTTCATATTGAGGTCTAATAACCAA
TACTTGCCTTCTTCATCTGCTCTGCTGTCGATTCGTATGGGTGCCCTGGC
GCCTACCAAACtaaaagctttttcacattctGCGTATACTATTTGGATTT
CTTTTGATTCTAGTTCATGATCTTCGAGGACGGAGCTGTTCTCGGAGACA
GCAACATCGCCATTCGAAGGTGCGATTCCGTTGACATGGTTGAATCGTTT
CACAGCTGGCAAAGACCATGGTGTACTTTTTTCCACTGTTTTATTCCCAA
TGAAGTATCTACCAGGAGGCATGACTGTAACAGTGATTTCTTGCCCTTCA
AGATAGTTTTCAATGTACAAAGCATTGCCGAATTCTTTGGCTGAAAACAA
TCGATTCAACTGCTCATTCATTTCCTCTTGATTTCGAACCACAACAACTC
CTTGACTACCTCGTCCCCGAACTGGTTTAATGATGCATGGGAAATGGAAA
TCTTGTGGTAAATCACACATCTGTTGGATTGAAACAAGTCTTTGAGGTTG
AACTGACAGTCCATTTGCTTTCAACAATCCACTGGTCAACATCTTATCAT
CATATTTGTCCAAATTGTTCGGTGATTGACCAACAAACTCGATATCTTTC
CCGAAGAAGCTTTCCACAGGGTGTCCCTTATAAAGCACTGTATTCAACCA
AAAACAAGTGGCTCCTTTCTTTAAAGCTTCTGCTATTCCTTCCTTGTTGT
CCGGAAACACCCAATCAAAGTCTTGATCCACTGAAGGGACAGAGTTAGCA
GTGATGATAGGTACTTTAAACTTCTGTAGCTGGTAAGCAATATCGGCACC
ACTATCTGAATAGCCGCCAGGTTTCATTGGTTTTTGAATCCCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053754-exon-scaffold_233-1491911889:893503..894496 | TCONS_00053754-exon-scaffold_233-1491911889:893503..894496 | Clytia hemisphaerica | exon |
| TCONS_00053754-exon-scaffold_233-1510915933:893503..894496 | TCONS_00053754-exon-scaffold_233-1510915933:893503..894496 | Clytia hemisphaerica | exon |
| TCONS_00053754-exon-scaffold_233-1575043694:893503..894496 | TCONS_00053754-exon-scaffold_233-1575043694:893503..894496 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:893503..894496 . |
Blast
The following BLAST results are available for this feature:
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