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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053699 ID=TCONS_00053699|Name=TCONS_00053699|organism=Clytia hemisphaerica|type=transcript|length=172bp
GGAGAAgttgatcaaaacAGTTCAACTGAGGTACTAACTTGAAATCGTAG
TTTTTCTTGTACAATGACATTCGATTAATCAGGTTGAGATTGCATATAAT
CTTGGCAGTTTGTTTCGAATAGTACTGAATCAGCATACTCACGTTGGAGA
AGTAGATCAAAACAGTCCAAAG Run BLAST on NCBI transcript from alignment at scaffold_233:1169272..1170224- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053699 ID=TCONS_00053699|Name=TCONS_00053699|organism=Clytia hemisphaerica|type=transcript|length=953bp|location=Sequence derived from alignment at scaffold_233:1169272..1170224- (Clytia hemisphaerica)
GGAGAAGTTGATCAAAACATTCCAACGGAGGGACTAACTTGAAATCGTAA
TTTTTTTCTCTTACAATGATACTTGATTAATCAGGTTGAGATTGTATTTA
ATCTTGGTAGTTTGTTTCGAATAATACTGAATCAGCANACTTGATTAATC
ATGTTGAGATTGCATATAATCTTGGTAGTTTGTTTCGAATAGTACTGAAT
CAGCATACTCACGTTGGAGAAGTTGATCAAAACAGTCGAAAGTAGGGACT
AAATTGGAATTGTAGTGTTTTTCTTGTACAATCATACTCGATTAATCAGG
TTGAGATTGCGTATAATCTTGGTAGTTTGTTTCGAATAGTACTGAATCAG
CGTACTCACGTTGGAGAAGTTGATCAAAACAGTCCAAAGGAGGGAGTAAC
TTGAAATCGTAGTGTTTTTCTTATACAATGATACTTGATTAATCATGTTG
AGATTGCATATAATTTTGGTAGTTTGTTTCGAATAGTACTGAATCAGCAT
ACTCTCTTTGGAGAAGTTGATCAAAACATTCCAACGGAGGGACTAACTTG
AAATCGTAATTTTTTTCTCTTACAATGATACTTGATTAATCAGGTTGAGA
TTGTATTTAATCTTGGTAGTTTGTTTCGAATAATACTGAATCAGCATACT
CTCTTTGGAGAAGTTGATCAAAATAGTCCAAAGGAGGGACTTACTTGAAA
TCGTAAGTTTTTTCTCGGACAATGATATAATTCCTTGTTGGTAGTTTGTT
TCGAATAGTACTGAATCAGCATACTCACGTTGGAGAAGTAGATCAAAACA
GTTCAACTGAGGTACTAACTTGAAATCGTAGTTTTTCTTGTACAATGACA
TTCGATTAATCAGGTTGAGATTGCATATAATCTTGGCAGTTTGTTTCGAA
TAGTACTGAATCAGCATACTCACGTTGGAGAAGTAGATCAAAACAGTCCA
AAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053699-exon-scaffold_233-1575043694:1170207..1170224 | TCONS_00053699-exon-scaffold_233-1575043694:1170207..1170224 | Clytia hemisphaerica | exon |
| TCONS_00053699-exon-scaffold_233-1575043694:1169272..1169425 | TCONS_00053699-exon-scaffold_233-1575043694:1169272..1169425 | Clytia hemisphaerica | exon |
| TCONS_00053699-exon-scaffold_233-1510915933:1170207..1170224 | TCONS_00053699-exon-scaffold_233-1510915933:1170207..1170224 | Clytia hemisphaerica | exon |
| TCONS_00053699-exon-scaffold_233-1510915933:1169272..1169425 | TCONS_00053699-exon-scaffold_233-1510915933:1169272..1169425 | Clytia hemisphaerica | exon |
| TCONS_00053699-exon-scaffold_233-1491911889:1170207..1170224 | TCONS_00053699-exon-scaffold_233-1491911889:1170207..1170224 | Clytia hemisphaerica | exon |
| TCONS_00053699-exon-scaffold_233-1491911889:1169272..1169425 | TCONS_00053699-exon-scaffold_233-1491911889:1169272..1169425 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:1169272..1170224 - |
Blast
The following BLAST results are available for this feature:
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