TCONS_00053518 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053518
Unique NameTCONS_00053518
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length198

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053518 ID=TCONS_00053518|Name=TCONS_00053518|organism=Clytia hemisphaerica|type=transcript|length=198bp
NNTTGTGGAAGCGTACTAGATGTCGCTTTGACAGAGTCAGATAAACGTGT
ATATGGACTGTTTGAAGGGGGTTGAATATTGTAATTCTCCATAACGGAAG
CACAGAAATTGTGACTGGTTACATCACTTTTCAGTCCACTATAATCAAGA
CGTATCAGGCGATCTCGTAGAGAAGATTTCTTTTTGAGGCGTGAAATC
Run BLAST on NCBI

transcript from alignment at scaffold_232:128557..128754

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053518 ID=TCONS_00053518|Name=TCONS_00053518|organism=Clytia hemisphaerica|type=transcript|length=198bp|location=Sequence derived from alignment at scaffold_232:128557..128754 (Clytia hemisphaerica)
GATTTCACGCCTCAAAAAGAAATCTTCTCTACGAGATCGCCTGATACGTC
TTGATTATAGTGGACTGAAAAGTGATGTAACCAGTCACAATTTCTGTGCT
TCCGTTATGGAGAATTACAATATTCAACCCCCTTCAAACAGTCCATATAC
ACGTTTATCTGACTCTGTCAAAGCGACATCTAGTACGCTTCCACAANN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033786XLOC_033786Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053518-exon-scaffold_232-1491911889:128557..128754TCONS_00053518-exon-scaffold_232-1491911889:128557..128754Clytia hemisphaericaexon
TCONS_00053518-exon-scaffold_232-1510915933:128557..128754TCONS_00053518-exon-scaffold_232-1510915933:128557..128754Clytia hemisphaericaexon
TCONS_00053518-exon-scaffold_232-1575043694:128557..128754TCONS_00053518-exon-scaffold_232-1575043694:128557..128754Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_232supercontigscaffold_232:128557..128754 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053518 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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