TCONS_00053438 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053438
Unique NameTCONS_00053438
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1961

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053438 ID=TCONS_00053438|Name=TCONS_00053438|organism=Clytia hemisphaerica|type=transcript|length=1961bp
CTCGTTCAGCTTTTCATAGCTTTTCTTCCTTACTTTGGGCTACTACATTC
TCAATCTCCATTCCCTCTATCTTTATAACTTGGTCGACcatagacaggag
acccgtccaaAATATGATCTGATGTAGTTCGGGTTTGACCTATCAGTTAG
CTTTTGACATAAAAGATTGACAGAATTGCAGCTctcaattaacaaaaaca
actgTGTTTTTCCTTAAGTGTCACcagtaaaagaaaaacaaaatttgatt
gccTTTGCTTTCTCAGCTGTCACTTTAAAGATGATGATAAAGCTCACAAC
ATTAGTTTTATTCGCCGTATGGACTTCCTAGTATCTTTGCGACGTCACCA
ACTTGTGACGCAACAAATTTCgagaaattgacgtcaaataaaatttgcaa
aagaaatggAAAGCTCATTTGATTTTGTGAAAAGATGTCTTCGGTTTCAG
CAGAGATCGATTATTTTGAGAATCAAGAAACGAAAATGTCATTAGATAGT
AATAGTGAAATAATGTCTGATGAAATTCAGTTTAAAGGGAACCTCACTGT
TGAGCAACGCCTTAAAATTTGTGAAGAAACATTTGTCGAAAAACAAATAG
AATTCGAACACCAATATCGTTTGCTGGCAAAAGATTACGAGCACAGCATC
AATTACGCGCAAGAAGTGCAGCAAGAGTTGATCAAGACTCGAAACCAACG
CTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGCCAAAACGAGAGAGCAG
CTACAAGACGcttgtttaaaataaaaaaccagAAAATTTCGGAATTACAC
GATCAAGTCCGTAATTTACACGAAGAAGTGGCAGCTTGGATGACGTTGGC
GAAATATTGTCAATGTGAAGCAAGCGTCAACTTCGCAGGAGATTCGCAAT
CTCCTTTGCTACAAAAAACCAATTCTCTAAAAGAAGCACGTGctgcaaaa
agtttaaagagaATCAATAGCCAACGATTGGCTGAAACGCAGTCACGTGA
TGCTGCACGCAATAAACGATTGGTCGAGCCAAGATCATCAAACAAACGGC
TCATCCCAAAAGAAGCATTGGAACCGATTCAATCAAAAGAATTACCTTTC
CGATCCGCCAATCCTAAATTTCGCGTCAAAGTTTACAAAGAATTGTCAGT
TGATGAAACAGTACTGACCAAGCAATTCCCCATTTTACCGAAAATCGAAA
GAGGAAACAGTTCTTCCGAAGATTTTGAAGCAGATTCGTTGGACGTGAGA
GATGATATAGAGCTGACATACAGAAAGACACCATATTTGGTTGGAAGTCA
ACAACGAAGTGGTCAGTCTCACGACTGTGATGAAAGTATTGAAGATGATT
CGTTGTTGAGACCATCTCCGTcggtttcactttcgttttcaacaaCTAGC
ACTCCTCCACCAGATTTCAACAATTTGAAAGTCTTACCTCCAATCAAAGG
AAATGAGAACCAGCATTCAACTCCTTCACCACGACCACCATCAGTGAAAA
GGTCATACACTGTCTTGTCACCTATCACCAACAAGTTGgcgtcaaaatca
aaaacaccATCATACCACAAACCCCTTACTATCAGACAACCATCAAAATC
ACCATCATCACCAATCATTGCACGATTACCAGCACCGCCTACTTCTCCAC
GAAAAGATTTCACACCTTTGAGATTGCCAGTCATCTCACCGCAATCAACA
GCTCAACTGAAACAAGAAGAGAGTGACGTACATGGTAGACCAATCGCGTT
CACATGTCCTCTCCTTTCACCGTCCAATGAATTCAAACCAAAACCGCCGA
CTACAAAACCACAACGGCCCCATTTGAACCATCGACACCAGCGCCGTGTT
GGAGCCAAGCCCGGAATGCCCAATAAAAGCGTAAGCTTTATCATCAAACA
TTAAAGACGCTTCAAAAAACCAAAATCTCATattcataaaaatgttttcc
aaataTATCAC
Run BLAST on NCBI

protein sequence of TCONS_00053438-protein

>TCONS_00053438-protein ID=TCONS_00053438-protein|Name=TCONS_00053438-protein|organism=Clytia hemisphaerica|type=polypeptide|length=489bp
MSSVSAEIDYFENQETKMSLDSNSEIMSDEIQFKGNLTVEQRLKICEETF
VEKQIEFEHQYRLLAKDYEHSINYAQEVQQELIKTRNQRCEEFEKLKETS
QNERAATRRLFKIKNQKISELHDQVRNLHEEVAAWMTLAKYCQCEASVNF
AGDSQSPLLQKTNSLKEARAAKSLKRINSQRLAETQSRDAARNKRLVEPR
SSNKRLIPKEALEPIQSKELPFRSANPKFRVKVYKELSVDETVLTKQFPI
LPKIERGNSSSEDFEADSLDVRDDIELTYRKTPYLVGSQQRSGQSHDCDE
SIEDDSLLRPSPSVSLSFSTTSTPPPDFNNLKVLPPIKGNENQHSTPSPR
PPSVKRSYTVLSPITNKLASKSKTPSYHKPLTIRQPSKSPSSPIIARLPA
PPTSPRKDFTPLRLPVISPQSTAQLKQEESDVHGRPIAFTCPLLSPSNEF
KPKPPTTKPQRPHLNHRHQRRVGAKPGMPNKSVSFIIKH
Run BLAST on NCBI

transcript from alignment at scaffold_231:231044..234774+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053438 ID=TCONS_00053438|Name=TCONS_00053438|organism=Clytia hemisphaerica|type=transcript|length=3731bp|location=Sequence derived from alignment at scaffold_231:231044..234774+ (Clytia hemisphaerica)
CTCGTTCAGCTTTTCATAGCTTTTCTTCCTTACTTTGGGCTACTACATTC
TCAATCTCCATTCCCTCTATCTTTATAACTTGGTCGACcatagacaggag
acccgtccaaAATATGATCTGATGTAGTTCGGGTTTGACCTATCAGTTAG
CTTTTGACATAAAAGATTGACAGAATTGCAGCTctcaattaacaaaaaca
actgTGTTTTTCCTTAAGTGTCACcagtaaaagaaaaacaaaatttgatt
gccTTTGCTTTCTCAGCTGTCACTTTAAAGATGATGATAAAGCTCACAAC
ATTAGTTTTATTCGCCGTATGGACTTCCTAGTATCTTTGCGACGTCACCA
ACTTGTGACGCAACAAATTTCgagaaattgacgtcaaataaaatttgcaa
aagaaatggAAAGCTCATTTGATTTTGTGAAAAGATGTCTTCGGTTTCAG
CAGAGATCGATTATTTTGAGAATCAAGAAACGAAAATGTCATTAGATAGT
AATAGTGAAATAATGTCTGATGAAATTCAGTTTAAAGGGAACCTCACTGT
TGAGCAACGCCTTAAAATTTGTGAAGAAACATTTGTCGAAAAACAAATAG
AATTCGAACACCAATATCGTTTGCTGGCAAAAGATTACGAGCACAGCATC
AATTACGCGCAAGAAGTGCAGCAAGAGTTGATCAAGACTCGAAACCAACG
CTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGCCAAAACGAGAGAGCAG
CTACAAGACGcttgtttaaaataaaaaaccagAAAATTTCGGAATTACAC
GATCAAGTCCGTAATTTACACGAAGAAGTGGCAGCTTGGATGACGTTGGC
GAAATATTGTCAATGTGAAGCAAGCGTCAACTTCGCAGGAGATTCGCAAT
CTCCTTTGCTACAAAAAACCAATTCTCTAAAAGAAGCACGTGctgcaaaa
agtttaaagagaATCAATAGCCAACGATTGGCTGAAACGCAGTCACGTGA
TGCTGCACGCAATAAACGATTGGTCGAGCCAAGATCATCAAACAAACGGC
TCATCCCAAAAGAAGCATTGGAACCGATTCAATCAAAAGAATTACCTTTC
CGATCCGCCAATCCTAAATTGTGAGAATCTAAAATCTTACTTTTTTCTGT
TTCAGTATCGTGAGTGTAGAGATGGAAATGTCATTTGATTTTAGAAAGTT
TGATTTAAGTTTAGGTGTTTAGATATGAAATCTTGAATTTAGAATTTGta
aatgaaatattttggttttacttTTCAGTCGCGTCAAAGTTTACAAAGAA
TTGTCAGTTGATGAAACAGTACTGACCAAGCAATTCCCCATTTTGTAAGT
TGATAGAAACTTTGTTGTTTAGTTGTGAATCAGAGAAATTAGTTTTTACT
GTAAAGGACAAACATGAGAGTAGTCAAAAAGCAGAGATTGACATTTTAGT
TACTAGCCTTTGAAAAGTTAGTAGAGATAAAAAGAATAAGTTATATTATG
GAATTTTTCTACCTCGTTCTAGACCGAAAATCGAAAGAGGAAACAGTTCT
TCCGAAGATTTTGAAGCAGATTCGTTGGACGTGAGAGATGATATgtaaga
aattttcatttaaacGCCACAATCTAGTACTGATTAGTCACCGAGGACGA
ATCAACGAAGTGGTTAAGATCAGTTCGATGATGCATTCTGGGTTCATTAC
CGCTCCGGTAGCTTCGGTGTTTTCTTTCTAGCCTTTTCCAACGTGGTTCA
TCTAGGTTGGTTTGCATTaagtgtttgaaaaaatttcgttAATTTTCCAC
TGTTAAAGGGATGCAGTTTGATATAGGTAAGGTAAGTAGACTATGCAGTC
TCATCAGATCTGGTTACATGGGAACATCTGGTCTGTCATGAATTTGGTCT
GGTACTGAACTtatattattgttttgttttaactCTCAGAGAGCTGACAT
ACAGAAAGACACCATATTTGGTTGGAAGTCAACAACGAAGTGGTCAGTCT
CACGACTGTGATGAAAGTATTGAAGATGATTCGTTGTTGAGACCATCTCC
GTcggtttcactttcgttttcaacaaCTAGCACTCCTCCACCAGATTTCA
ACAATTTGAAAGTCTTGTAAGTTTTTTATTGACGCGACTAGTTGCCAAAT
TTTTCTGGCCTTGATTCAAATATATGCATTCGTTTGATAGATTATTTTGC
AGATTAAGTAAAAGTAGGGGTAAATGGTGTTCAAAACAAGTTGCTGTTTT
AGAGGAGAGAAAGACCGTGTGTCAATTTGTTTTGCTCGCCAAGGGTTGta
aaaatcatgtgtttgattgtCGAACCCTCACTTAGCCTCACTTAATCAAA
ATTGTCCATTGTTTCCCAGACCTCCAATCAAAGGAAATGAGAACCAGCAT
TCAACTCCTTCACCACGACCACCATCAGTGAAAAGGTAAGACCCTCGATA
AAATGTATGCATTTTTGTGTGGAAAAATGGGATAATGTTGTGTACTTTCT
CAAAATGATGGTGATTAAACAATAATGAGATCAACCATTTTTAGGTCATA
CACTGTCTTGTCACCTATCACCAACAAGTTGgcgtcaaaatcaaaaacac
cATCATACCACAAGTAAGTTCCCTTTTAGTGAATCTAATCCGTATATGTT
TCATACCATGACTCAAACATACGATGTAGAGAGTAGGTATTCTTTATAAT
GTTTCccagataaaaaaaaacactagtAAAAATATAGTCAATAAATATAT
ATGGAACAGGTTGTTTGTGCAGAGTAATTGTTTTAACGAGATTTACTCAA
TCTAAGAATGATTGATTTTTCAGACCCCTTACTATCAGACAACCATCAAA
ATCACCATCATCACCAATCATTGCACGATTACCAGCACCGCCTACTTCTC
CACGAAAAGATTTCACACCTTTGAGATTGCCAGTCATCTCACCGCAATCA
ACAGCTCAACTGAAACAGTTAGTAAATATGACGCATCCTTTAGCCTTGGC
ACTTATGATTTACACCTTCGTAGTTAGGAAATACAAACTTTATTTGTATA
ATTGAGATACGGAGTCTCGATATGTCATTTTTCTAACGGTAGCTCCGAAA
AAAATCTgttgctaaaatagaaaaacggTGGTTCGTCGCCAGCTTGTGCT
CCCGTTAGAAAATATGACATCTTAcgcatacacgcttttttaggttagga
tcctaattcatactagatttaacagttagtacatacgtctcaagcataaa
atggcatttttgtgaaaggatgCCTTACTTGAGGGTAATTGAcagtttat
aattgaaaatgctctaaaaatggcattcttagcttgagtagcaaaattcc
atgatggtgatattcttagcattattcttaattttttggccattttcatc
atggacattcttataaagtgtattcttataaaaaaaagcgtgtatcaagA
ATGGACTTCACTAATTTATCATTCTTGATTATAGAGAAGAGAGTGACGTA
CATGGTAGACCAATCGCGTTCACATGTCCTCTCCTTTCACCGTCCAATGA
ATTCAAACCAAAACCGCCGACTACAAAACCACAACGGCCCCATTTGAACC
ATCGACACCAGCGCCGTGTTGGAGCCAAGCCCGGAATGCCCAATAAAAGC
GTAAGCTTTATCATCAAACATTAAAGACGCTTCAAAAAACCAAAATCTCA
TattcataaaaatgttttccaaataTATCAC

Coding sequence (CDS) from alignment at scaffold_231:231044..234774+

>TCONS_00053438 ID=TCONS_00053438|Name=TCONS_00053438|organism=Clytia hemisphaerica|type=CDS|length=11760bp|location=Sequence derived from alignment at scaffold_231:231044..234774+ (Clytia hemisphaerica)
ATGTCTTCGGTTTCAGCAGAGATCGATTATTTTGAGAATCAAGAAACGAA
AATGTCATTAGATAGTAATAGTGAAATAATGTCTGATGAAATTCAGTTTA
AAGGGAACCTCACTGTTGAGCAACGCCTTAAAATTTGTGAAGAAACATTT
GTCGAAAAACAAATAGAATTCGAACACCAATATCGTTTGCTGGCAAAAGA
TTACGAGCACAGCATCAATTACGCGCAAGAAGTGCAGCAAGAGTTGATCA
AGACTCGAAACCAACGCTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGC
CAAAACGAGAGAGCAGCTACAAGACGcttgtttaaaataaaaaaccagAA
AATTTCGGAATTACACGATCAAGTCCGTAATTTACACGAAGAAGTGGCAG
CTTGGATGACGTTGGCGAAATATTGTCAATGTGAAGCAAGCGTCAACTTC
GCAGGAGATTCGCAATCTCCTTTGCTACAAAAAACCAATTCTCTAAAAGA
AGCACGTGctgcaaaaagtttaaagagaATCAATAGCCAACGATTGGCTG
AAACGCAGTCACGTGATGCTGCACGCAATAAACGATTGGTCGAGCCAAGA
TCATCAAACAAACGGCTCATCCCAAAAGAAGCATTGGAACCGATTCAATC
AAAAGAATTACCTTTCCGATCCGCCAATCCTAAATTTCGCGTCAAAGTTT
ACAAAGAATTGTCAGTTGATGAAACAGTACTGACCAAGCAATTCCCCATT
TTACCGAAAATCGAAAGAGGAAACAGTTCTTCCGAAGATTTTGAAGCAGA
TTCGTTGGACGTGAGAGATGATATAGAGCTGACATACAGAAAGACACCAT
ATTTGGTTGGAAGTCAACAACGAAGTGGTCAGTCTCACGACTGTGATGAA
AGTATTGAAGATGATTCGTTGTTGAGACCATCTCCGTcggtttcactttc
gttttcaacaaCTAGCACTCCTCCACCAGATTTCAACAATTTGAAAGTCT
TACCTCCAATCAAAGGAAATGAGAACCAGCATTCAACTCCTTCACCACGA
CCACCATCAGTGAAAAGGTCATACACTGTCTTGTCACCTATCACCAACAA
GTTGgcgtcaaaatcaaaaacaccATCATACCACAAACCCCTTACTATCA
GACAACCATCAAAATCACCATCATCACCAATCATTGCACGATTACCAGCA
CCGCCTACTTCTCCACGAAAAGATTTCACACCTTTGAGATTGCCAGTCAT
CTCACCGCAATCAACAGCTCAACTGAAACAAGAAGAGAGTGACGTACATG
GTAGACCAATCGCGTTCACATGTCCTCTCCTTTCACCGTCCAATGAATTC
AAACCAAAACCGCCGACTACAAAACCACAACGGCCCCATTTGAACCATCG
ACACCAGCGCCGTGTTGGAGCCAAGCCCGGAATGCCCAATAAAAGCGTAA
GCTTTATCATCAAACATTAAATGTCTTCGGTTTCAGCAGAGATCGATTAT
TTTGAGAATCAAGAAACGAAAATGTCATTAGATAGTAATAGTGAAATAAT
GTCTGATGAAATTCAGTTTAAAGGGAACCTCACTGTTGAGCAACGCCTTA
AAATTTGTGAAGAAACATTTGTCGAAAAACAAATAGAATTCGAACACCAA
TATCGTTTGCTGGCAAAAGATTACGAGCACAGCATCAATTACGCGCAAGA
AGTGCAGCAAGAGTTGATCAAGACTCGAAACCAACGCTGCGAGGAGTTCG
AAAAACTCAAAGAAACAAGCCAAAACGAGAGAGCAGCTACAAGACGcttg
tttaaaataaaaaaccagAAAATTTCGGAATTACACGATCAAGTCCGTAA
TTTACACGAAGAAGTGGCAGCTTGGATGACGTTGGCGAAATATTGTCAAT
GTGAAGCAAGCGTCAACTTCGCAGGAGATTCGCAATCTCCTTTGCTACAA
AAAACCAATTCTCTAAAAGAAGCACGTGctgcaaaaagtttaaagagaAT
CAATAGCCAACGATTGGCTGAAACGCAGTCACGTGATGCTGCACGCAATA
AACGATTGGTCGAGCCAAGATCATCAAACAAACGGCTCATCCCAAAAGAA
GCATTGGAACCGATTCAATCAAAAGAATTACCTTTCCGATCCGCCAATCC
TAAATTTCGCGTCAAAGTTTACAAAGAATTGTCAGTTGATGAAACAGTAC
TGACCAAGCAATTCCCCATTTTACCGAAAATCGAAAGAGGAAACAGTTCT
TCCGAAGATTTTGAAGCAGATTCGTTGGACGTGAGAGATGATATAGAGCT
GACATACAGAAAGACACCATATTTGGTTGGAAGTCAACAACGAAGTGGTC
AGTCTCACGACTGTGATGAAAGTATTGAAGATGATTCGTTGTTGAGACCA
TCTCCGTcggtttcactttcgttttcaacaaCTAGCACTCCTCCACCAGA
TTTCAACAATTTGAAAGTCTTACCTCCAATCAAAGGAAATGAGAACCAGC
ATTCAACTCCTTCACCACGACCACCATCAGTGAAAAGGTCATACACTGTC
TTGTCACCTATCACCAACAAGTTGgcgtcaaaatcaaaaacaccATCATA
CCACAAACCCCTTACTATCAGACAACCATCAAAATCACCATCATCACCAA
TCATTGCACGATTACCAGCACCGCCTACTTCTCCACGAAAAGATTTCACA
CCTTTGAGATTGCCAGTCATCTCACCGCAATCAACAGCTCAACTGAAACA
AGAAGAGAGTGACGTACATGGTAGACCAATCGCGTTCACATGTCCTCTCC
TTTCACCGTCCAATGAATTCAAACCAAAACCGCCGACTACAAAACCACAA
CGGCCCCATTTGAACCATCGACACCAGCGCCGTGTTGGAGCCAAGCCCGG
AATGCCCAATAAAAGCGTAAGCTTTATCATCAAACATTAAATGTCTTCGG
TTTCAGCAGAGATCGATTATTTTGAGAATCAAGAAACGAAAATGTCATTA
GATAGTAATAGTGAAATAATGTCTGATGAAATTCAGTTTAAAGGGAACCT
CACTGTTGAGCAACGCCTTAAAATTTGTGAAGAAACATTTGTCGAAAAAC
AAATAGAATTCGAACACCAATATCGTTTGCTGGCAAAAGATTACGAGCAC
AGCATCAATTACGCGCAAGAAGTGCAGCAAGAGTTGATCAAGACTCGAAA
CCAACGCTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGCCAAAACGAGA
GAGCAGCTACAAGACGcttgtttaaaataaaaaaccagAAAATTTCGGAA
TTACACGATCAAGTCCGTAATTTACACGAAGAAGTGGCAGCTTGGATGAC
GTTGGCGAAATATTGTCAATGTGAAGCAAGCGTCAACTTCGCAGGAGATT
CGCAATCTCCTTTGCTACAAAAAACCAATTCTCTAAAAGAAGCACGTGct
gcaaaaagtttaaagagaATCAATAGCCAACGATTGGCTGAAACGCAGTC
ACGTGATGCTGCACGCAATAAACGATTGGTCGAGCCAAGATCATCAAACA
AACGGCTCATCCCAAAAGAAGCATTGGAACCGATTCAATCAAAAGAATTA
CCTTTCCGATCCGCCAATCCTAAATTTCGCGTCAAAGTTTACAAAGAATT
GTCAGTTGATGAAACAGTACTGACCAAGCAATTCCCCATTTTACCGAAAA
TCGAAAGAGGAAACAGTTCTTCCGAAGATTTTGAAGCAGATTCGTTGGAC
GTGAGAGATGATATAGAGCTGACATACAGAAAGACACCATATTTGGTTGG
AAGTCAACAACGAAGTGGTCAGTCTCACGACTGTGATGAAAGTATTGAAG
ATGATTCGTTGTTGAGACCATCTCCGTcggtttcactttcgttttcaaca
aCTAGCACTCCTCCACCAGATTTCAACAATTTGAAAGTCTTACCTCCAAT
CAAAGGAAATGAGAACCAGCATTCAACTCCTTCACCACGACCACCATCAG
TGAAAAGGTCATACACTGTCTTGTCACCTATCACCAACAAGTTGgcgtca
aaatcaaaaacaccATCATACCACAAACCCCTTACTATCAGACAACCATC
AAAATCACCATCATCACCAATCATTGCACGATTACCAGCACCGCCTACTT
CTCCACGAAAAGATTTCACACCTTTGAGATTGCCAGTCATCTCACCGCAA
TCAACAGCTCAACTGAAACAAGAAGAGAGTGACGTACATGGTAGACCAAT
CGCGTTCACATGTCCTCTCCTTTCACCGTCCAATGAATTCAAACCAAAAC
CGCCGACTACAAAACCACAACGGCCCCATTTGAACCATCGACACCAGCGC
CGTGTTGGAGCCAAGCCCGGAATGCCCAATAAAAGCGTAAGCTTTATCAT
CAAACATTAAATGTCTTCGGTTTCAGCAGAGATCGATTATTTTGAGAATC
AAGAAACGAAAATGTCATTAGATAGTAATAGTGAAATAATGTCTGATGAA
ATTCAGTTTAAAGGGAACCTCACTGTTGAGCAACGCCTTAAAATTTGTGA
AGAAACATTTGTCGAAAAACAAATAGAATTCGAACACCAATATCGTTTGC
TGGCAAAAGATTACGAGCACAGCATCAATTACGCGCAAGAAGTGCAGCAA
GAGTTGATCAAGACTCGAAACCAACGCTGCGAGGAGTTCGAAAAACTCAA
AGAAACAAGCCAAAACGAGAGAGCAGCTACAAGACGcttgtttaaaataa
aaaaccagAAAATTTCGGAATTACACGATCAAGTCCGTAATTTACACGAA
GAAGTGGCAGCTTGGATGACGTTGGCGAAATATTGTCAATGTGAAGCAAG
CGTCAACTTCGCAGGAGATTCGCAATCTCCTTTGCTACAAAAAACCAATT
CTCTAAAAGAAGCACGTGctgcaaaaagtttaaagagaATCAATAGCCAA
CGATTGGCTGAAACGCAGTCACGTGATGCTGCACGCAATAAACGATTGGT
CGAGCCAAGATCATCAAACAAACGGCTCATCCCAAAAGAAGCATTGGAAC
CGATTCAATCAAAAGAATTACCTTTCCGATCCGCCAATCCTAAATTTCGC
GTCAAAGTTTACAAAGAATTGTCAGTTGATGAAACAGTACTGACCAAGCA
ATTCCCCATTTTACCGAAAATCGAAAGAGGAAACAGTTCTTCCGAAGATT
TTGAAGCAGATTCGTTGGACGTGAGAGATGATATAGAGCTGACATACAGA
AAGACACCATATTTGGTTGGAAGTCAACAACGAAGTGGTCAGTCTCACGA
CTGTGATGAAAGTATTGAAGATGATTCGTTGTTGAGACCATCTCCGTcgg
tttcactttcgttttcaacaaCTAGCACTCCTCCACCAGATTTCAACAAT
TTGAAAGTCTTACCTCCAATCAAAGGAAATGAGAACCAGCATTCAACTCC
TTCACCACGACCACCATCAGTGAAAAGGTCATACACTGTCTTGTCACCTA
TCACCAACAAGTTGgcgtcaaaatcaaaaacaccATCATACCACAAACCC
CTTACTATCAGACAACCATCAAAATCACCATCATCACCAATCATTGCACG
ATTACCAGCACCGCCTACTTCTCCACGAAAAGATTTCACACCTTTGAGAT
TGCCAGTCATCTCACCGCAATCAACAGCTCAACTGAAACAAGAAGAGAGT
GACGTACATGGTAGACCAATCGCGTTCACATGTCCTCTCCTTTCACCGTC
CAATGAATTCAAACCAAAACCGCCGACTACAAAACCACAACGGCCCCATT
TGAACCATCGACACCAGCGCCGTGTTGGAGCCAAGCCCGGAATGCCCAAT
AAAAGCGTAAGCTTTATCATCAAACATTAAATGTCTTCGGTTTCAGCAGA
GATCGATTATTTTGAGAATCAAGAAACGAAAATGTCATTAGATAGTAATA
GTGAAATAATGTCTGATGAAATTCAGTTTAAAGGGAACCTCACTGTTGAG
CAACGCCTTAAAATTTGTGAAGAAACATTTGTCGAAAAACAAATAGAATT
CGAACACCAATATCGTTTGCTGGCAAAAGATTACGAGCACAGCATCAATT
ACGCGCAAGAAGTGCAGCAAGAGTTGATCAAGACTCGAAACCAACGCTGC
GAGGAGTTCGAAAAACTCAAAGAAACAAGCCAAAACGAGAGAGCAGCTAC
AAGACGcttgtttaaaataaaaaaccagAAAATTTCGGAATTACACGATC
AAGTCCGTAATTTACACGAAGAAGTGGCAGCTTGGATGACGTTGGCGAAA
TATTGTCAATGTGAAGCAAGCGTCAACTTCGCAGGAGATTCGCAATCTCC
TTTGCTACAAAAAACCAATTCTCTAAAAGAAGCACGTGctgcaaaaagtt
taaagagaATCAATAGCCAACGATTGGCTGAAACGCAGTCACGTGATGCT
GCACGCAATAAACGATTGGTCGAGCCAAGATCATCAAACAAACGGCTCAT
CCCAAAAGAAGCATTGGAACCGATTCAATCAAAAGAATTACCTTTCCGAT
CCGCCAATCCTAAATTTCGCGTCAAAGTTTACAAAGAATTGTCAGTTGAT
GAAACAGTACTGACCAAGCAATTCCCCATTTTACCGAAAATCGAAAGAGG
AAACAGTTCTTCCGAAGATTTTGAAGCAGATTCGTTGGACGTGAGAGATG
ATATAGAGCTGACATACAGAAAGACACCATATTTGGTTGGAAGTCAACAA
CGAAGTGGTCAGTCTCACGACTGTGATGAAAGTATTGAAGATGATTCGTT
GTTGAGACCATCTCCGTcggtttcactttcgttttcaacaaCTAGCACTC
CTCCACCAGATTTCAACAATTTGAAAGTCTTACCTCCAATCAAAGGAAAT
GAGAACCAGCATTCAACTCCTTCACCACGACCACCATCAGTGAAAAGGTC
ATACACTGTCTTGTCACCTATCACCAACAAGTTGgcgtcaaaatcaaaaa
caccATCATACCACAAACCCCTTACTATCAGACAACCATCAAAATCACCA
TCATCACCAATCATTGCACGATTACCAGCACCGCCTACTTCTCCACGAAA
AGATTTCACACCTTTGAGATTGCCAGTCATCTCACCGCAATCAACAGCTC
AACTGAAACAAGAAGAGAGTGACGTACATGGTAGACCAATCGCGTTCACA
TGTCCTCTCCTTTCACCGTCCAATGAATTCAAACCAAAACCGCCGACTAC
AAAACCACAACGGCCCCATTTGAACCATCGACACCAGCGCCGTGTTGGAG
CCAAGCCCGGAATGCCCAATAAAAGCGTAAGCTTTATCATCAAACATTAA
ATGTCTTCGGTTTCAGCAGAGATCGATTATTTTGAGAATCAAGAAACGAA
AATGTCATTAGATAGTAATAGTGAAATAATGTCTGATGAAATTCAGTTTA
AAGGGAACCTCACTGTTGAGCAACGCCTTAAAATTTGTGAAGAAACATTT
GTCGAAAAACAAATAGAATTCGAACACCAATATCGTTTGCTGGCAAAAGA
TTACGAGCACAGCATCAATTACGCGCAAGAAGTGCAGCAAGAGTTGATCA
AGACTCGAAACCAACGCTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGC
CAAAACGAGAGAGCAGCTACAAGACGcttgtttaaaataaaaaaccagAA
AATTTCGGAATTACACGATCAAGTCCGTAATTTACACGAAGAAGTGGCAG
CTTGGATGACGTTGGCGAAATATTGTCAATGTGAAGCAAGCGTCAACTTC
GCAGGAGATTCGCAATCTCCTTTGCTACAAAAAACCAATTCTCTAAAAGA
AGCACGTGctgcaaaaagtttaaagagaATCAATAGCCAACGATTGGCTG
AAACGCAGTCACGTGATGCTGCACGCAATAAACGATTGGTCGAGCCAAGA
TCATCAAACAAACGGCTCATCCCAAAAGAAGCATTGGAACCGATTCAATC
AAAAGAATTACCTTTCCGATCCGCCAATCCTAAATTTCGCGTCAAAGTTT
ACAAAGAATTGTCAGTTGATGAAACAGTACTGACCAAGCAATTCCCCATT
TTACCGAAAATCGAAAGAGGAAACAGTTCTTCCGAAGATTTTGAAGCAGA
TTCGTTGGACGTGAGAGATGATATAGAGCTGACATACAGAAAGACACCAT
ATTTGGTTGGAAGTCAACAACGAAGTGGTCAGTCTCACGACTGTGATGAA
AGTATTGAAGATGATTCGTTGTTGAGACCATCTCCGTcggtttcactttc
gttttcaacaaCTAGCACTCCTCCACCAGATTTCAACAATTTGAAAGTCT
TACCTCCAATCAAAGGAAATGAGAACCAGCATTCAACTCCTTCACCACGA
CCACCATCAGTGAAAAGGTCATACACTGTCTTGTCACCTATCACCAACAA
GTTGgcgtcaaaatcaaaaacaccATCATACCACAAACCCCTTACTATCA
GACAACCATCAAAATCACCATCATCACCAATCATTGCACGATTACCAGCA
CCGCCTACTTCTCCACGAAAAGATTTCACACCTTTGAGATTGCCAGTCAT
CTCACCGCAATCAACAGCTCAACTGAAACAAGAAGAGAGTGACGTACATG
GTAGACCAATCGCGTTCACATGTCCTCTCCTTTCACCGTCCAATGAATTC
AAACCAAAACCGCCGACTACAAAACCACAACGGCCCCATTTGAACCATCG
ACACCAGCGCCGTGTTGGAGCCAAGCCCGGAATGCCCAATAAAAGCGTAA
GCTTTATCATCAAACATTAAATGTCTTCGGTTTCAGCAGAGATCGATTAT
TTTGAGAATCAAGAAACGAAAATGTCATTAGATAGTAATAGTGAAATAAT
GTCTGATGAAATTCAGTTTAAAGGGAACCTCACTGTTGAGCAACGCCTTA
AAATTTGTGAAGAAACATTTGTCGAAAAACAAATAGAATTCGAACACCAA
TATCGTTTGCTGGCAAAAGATTACGAGCACAGCATCAATTACGCGCAAGA
AGTGCAGCAAGAGTTGATCAAGACTCGAAACCAACGCTGCGAGGAGTTCG
AAAAACTCAAAGAAACAAGCCAAAACGAGAGAGCAGCTACAAGACGcttg
tttaaaataaaaaaccagAAAATTTCGGAATTACACGATCAAGTCCGTAA
TTTACACGAAGAAGTGGCAGCTTGGATGACGTTGGCGAAATATTGTCAAT
GTGAAGCAAGCGTCAACTTCGCAGGAGATTCGCAATCTCCTTTGCTACAA
AAAACCAATTCTCTAAAAGAAGCACGTGctgcaaaaagtttaaagagaAT
CAATAGCCAACGATTGGCTGAAACGCAGTCACGTGATGCTGCACGCAATA
AACGATTGGTCGAGCCAAGATCATCAAACAAACGGCTCATCCCAAAAGAA
GCATTGGAACCGATTCAATCAAAAGAATTACCTTTCCGATCCGCCAATCC
TAAATTTCGCGTCAAAGTTTACAAAGAATTGTCAGTTGATGAAACAGTAC
TGACCAAGCAATTCCCCATTTTACCGAAAATCGAAAGAGGAAACAGTTCT
TCCGAAGATTTTGAAGCAGATTCGTTGGACGTGAGAGATGATATAGAGCT
GACATACAGAAAGACACCATATTTGGTTGGAAGTCAACAACGAAGTGGTC
AGTCTCACGACTGTGATGAAAGTATTGAAGATGATTCGTTGTTGAGACCA
TCTCCGTcggtttcactttcgttttcaacaaCTAGCACTCCTCCACCAGA
TTTCAACAATTTGAAAGTCTTACCTCCAATCAAAGGAAATGAGAACCAGC
ATTCAACTCCTTCACCACGACCACCATCAGTGAAAAGGTCATACACTGTC
TTGTCACCTATCACCAACAAGTTGgcgtcaaaatcaaaaacaccATCATA
CCACAAACCCCTTACTATCAGACAACCATCAAAATCACCATCATCACCAA
TCATTGCACGATTACCAGCACCGCCTACTTCTCCACGAAAAGATTTCACA
CCTTTGAGATTGCCAGTCATCTCACCGCAATCAACAGCTCAACTGAAACA
AGAAGAGAGTGACGTACATGGTAGACCAATCGCGTTCACATGTCCTCTCC
TTTCACCGTCCAATGAATTCAAACCAAAACCGCCGACTACAAAACCACAA
CGGCCCCATTTGAACCATCGACACCAGCGCCGTGTTGGAGCCAAGCCCGG
AATGCCCAATAAAAGCGTAAGCTTTATCATCAAACATTAAATGTCTTCGG
TTTCAGCAGAGATCGATTATTTTGAGAATCAAGAAACGAAAATGTCATTA
GATAGTAATAGTGAAATAATGTCTGATGAAATTCAGTTTAAAGGGAACCT
CACTGTTGAGCAACGCCTTAAAATTTGTGAAGAAACATTTGTCGAAAAAC
AAATAGAATTCGAACACCAATATCGTTTGCTGGCAAAAGATTACGAGCAC
AGCATCAATTACGCGCAAGAAGTGCAGCAAGAGTTGATCAAGACTCGAAA
CCAACGCTGCGAGGAGTTCGAAAAACTCAAAGAAACAAGCCAAAACGAGA
GAGCAGCTACAAGACGcttgtttaaaataaaaaaccagAAAATTTCGGAA
TTACACGATCAAGTCCGTAATTTACACGAAGAAGTGGCAGCTTGGATGAC
GTTGGCGAAATATTGTCAATGTGAAGCAAGCGTCAACTTCGCAGGAGATT
CGCAATCTCCTTTGCTACAAAAAACCAATTCTCTAAAAGAAGCACGTGct
gcaaaaagtttaaagagaATCAATAGCCAACGATTGGCTGAAACGCAGTC
ACGTGATGCTGCACGCAATAAACGATTGGTCGAGCCAAGATCATCAAACA
AACGGCTCATCCCAAAAGAAGCATTGGAACCGATTCAATCAAAAGAATTA
CCTTTCCGATCCGCCAATCCTAAATTTCGCGTCAAAGTTTACAAAGAATT
GTCAGTTGATGAAACAGTACTGACCAAGCAATTCCCCATTTTACCGAAAA
TCGAAAGAGGAAACAGTTCTTCCGAAGATTTTGAAGCAGATTCGTTGGAC
GTGAGAGATGATATAGAGCTGACATACAGAAAGACACCATATTTGGTTGG
AAGTCAACAACGAAGTGGTCAGTCTCACGACTGTGATGAAAGTATTGAAG
ATGATTCGTTGTTGAGACCATCTCCGTcggtttcactttcgttttcaaca
aCTAGCACTCCTCCACCAGATTTCAACAATTTGAAAGTCTTACCTCCAAT
CAAAGGAAATGAGAACCAGCATTCAACTCCTTCACCACGACCACCATCAG
TGAAAAGGTCATACACTGTCTTGTCACCTATCACCAACAAGTTGgcgtca
aaatcaaaaacaccATCATACCACAAACCCCTTACTATCAGACAACCATC
AAAATCACCATCATCACCAATCATTGCACGATTACCAGCACCGCCTACTT
CTCCACGAAAAGATTTCACACCTTTGAGATTGCCAGTCATCTCACCGCAA
TCAACAGCTCAACTGAAACAAGAAGAGAGTGACGTACATGGTAGACCAAT
CGCGTTCACATGTCCTCTCCTTTCACCGTCCAATGAATTCAAACCAAAAC
CGCCGACTACAAAACCACAACGGCCCCATTTGAACCATCGACACCAGCGC
CGTGTTGGAGCCAAGCCCGGAATGCCCAATAAAAGCGTAAGCTTTATCAT
CAAACATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033735XLOC_033735Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053438-exon-scaffold_231-1491911889:231044..232163TCONS_00053438-exon-scaffold_231-1491911889:231044..232163Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:231044..232163TCONS_00053438-exon-scaffold_231-1510915933:231044..232163Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:231044..232163TCONS_00053438-exon-scaffold_231-1575043694:231044..232163Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:232322..232387TCONS_00053438-exon-scaffold_231-1491911889:232322..232387Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:232322..232387TCONS_00053438-exon-scaffold_231-1510915933:232322..232387Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:232322..232387TCONS_00053438-exon-scaffold_231-1575043694:232322..232387Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:232566..232637TCONS_00053438-exon-scaffold_231-1491911889:232566..232637Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:232566..232637TCONS_00053438-exon-scaffold_231-1510915933:232566..232637Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:232566..232637TCONS_00053438-exon-scaffold_231-1575043694:232566..232637Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:232983..233159TCONS_00053438-exon-scaffold_231-1491911889:232983..233159Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:232983..233159TCONS_00053438-exon-scaffold_231-1510915933:232983..233159Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:232983..233159TCONS_00053438-exon-scaffold_231-1575043694:232983..233159Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:233413..233478TCONS_00053438-exon-scaffold_231-1491911889:233413..233478Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:233413..233478TCONS_00053438-exon-scaffold_231-1510915933:233413..233478Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:233413..233478TCONS_00053438-exon-scaffold_231-1575043694:233413..233478Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:233588..233656TCONS_00053438-exon-scaffold_231-1491911889:233588..233656Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:233588..233656TCONS_00053438-exon-scaffold_231-1510915933:233588..233656Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:233588..233656TCONS_00053438-exon-scaffold_231-1575043694:233588..233656Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:233867..234010TCONS_00053438-exon-scaffold_231-1491911889:233867..234010Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:233867..234010TCONS_00053438-exon-scaffold_231-1510915933:233867..234010Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:233867..234010TCONS_00053438-exon-scaffold_231-1575043694:233867..234010Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1491911889:234528..234774TCONS_00053438-exon-scaffold_231-1491911889:234528..234774Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1510915933:234528..234774TCONS_00053438-exon-scaffold_231-1510915933:234528..234774Clytia hemisphaericaexon
TCONS_00053438-exon-scaffold_231-1575043694:234528..234774TCONS_00053438-exon-scaffold_231-1575043694:234528..234774Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053438-proteinTCONS_00053438-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_231supercontigscaffold_231:231044..234774 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0404997	0.098734	0	0.0224314	0.0819242	0.25895	0.338447	0.268104	0.0682566	0.0422734	0.410316	0.10789	0.363624	0.265737	0.0229971	0.148076	0.0760074	0.0311621	0.10763	0.0901018	0.0783148	0.0572988	0.0232181	0.0422172	0.326121	0.291055	0	0	0.0449515	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053438 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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