TCONS_00053408 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053408
Unique NameTCONS_00053408
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length153

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053408 ID=TCONS_00053408|Name=TCONS_00053408|organism=Clytia hemisphaerica|type=transcript|length=153bp
CCCAAAAGTGCTTCTATTTAAATTCTACAATTCTACTTGAACACATATTT
CCACTTGTTGTTATGTAAAGTTTTTCTGAGCACAGGCTGAtattattttt
ccaatattttttccaaatgtaaatgtatttaattttttagcaatGAGTTA
CAC
Run BLAST on NCBI

transcript from alignment at scaffold_23:10031..10183

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053408 ID=TCONS_00053408|Name=TCONS_00053408|organism=Clytia hemisphaerica|type=transcript|length=153bp|location=Sequence derived from alignment at scaffold_23:10031..10183 (Clytia hemisphaerica)
GTGTAACTCattgctaaaaaattaaatacatttacatttggaaaaaatat
tggaaaaataataTCAGCCTGTGCTCAGAAAAACTTTACATAACAACAAG
TGGAAATATGTGTTCAAGTAGAATTGTAGAATTTAAATAGAAGCACTTTT
GGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033715XLOC_033715Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053408-exon-scaffold_23-1491911889:10031..10183TCONS_00053408-exon-scaffold_23-1491911889:10031..10183Clytia hemisphaericaexon
TCONS_00053408-exon-scaffold_23-1510915933:10031..10183TCONS_00053408-exon-scaffold_23-1510915933:10031..10183Clytia hemisphaericaexon
TCONS_00053408-exon-scaffold_23-1575043694:10031..10183TCONS_00053408-exon-scaffold_23-1575043694:10031..10183Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_23supercontigscaffold_23:10031..10183 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00053408 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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