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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053377 ID=TCONS_00053377|Name=TCONS_00053377|organism=Clytia hemisphaerica|type=transcript|length=1255bp
CTGGAATGATtgaattttaagcaaataaaagaTAATAAAATTGGACAATA
AAAGCCAAtacctcaattttggcaaataACAACGGCACACCATATTTCAT
CCATTCGTCCATTAAGCACTACCCTCTACTAAAtgctttttcttataaga
atgtactctataagaatattcacGATGTAATGAAAAGACgccgttcttat
aaaaaaacatgcaaCCACCCCCCTCGACAAAGCCCGTAAATTTCATAATA
AAAATTAGGTGTATGCAGTGTCGACATTGCCTTAGTCCGTATTGAGCCAA
GAAAACTTCAAGACAAAAGATAAAGGAGGAGCTAGTTTCTCAATTTTCAT
TGCATTTCCATAAACTTTACACAACTAACCAAATCTTGACaaagttttta
acaattttgaaatattatgtaAACATTTTTAAGTTTAAACATTTGAAACT
TGAGACCTTGAACTGGGGACAATCGTATCAAGACAGAAATTATGCCCCTA
AAAATAATCTGCAAAATTGGGTACACGAACTGCATACCGTTCTTCTATCA
CACATTTAACTTTCCACAATTAAAAGCAccaaaaaaatactaaaattttt
ccaaaattttacaCCTTCCGTTTTTCTTTTCTAAGGAGCATACAATGCTT
TTTTCCATGACCTAGTctaaatcgcagacctctacaaaaccacggGTATA
TGAGCACGAATCCGCTACATAGTGGATTGAACGGATATCAGCAACCTATC
CATGACTTAGCTATCCTAAGATAGAAGCCCTGAGAGATGAACGAATGAAC
TTCTTTAATGTACTTACAAACACGCACATGAGATGAAAAAAATACTTAAT
CATTTCATTTCTAACCAGGAAAAATATCATTGAAATCTTTAAGAGGCGAG
ATTTAACAAAACAACAACCAATTGCGTCAATGCAATACCTTGTCTAATTT
ATCCCTTCATCATACATCATTTAAGTCCATTTCGCTTTAAAATGTGCACT
CTTTTTCGCTACATAGTGGAAACCATACCAGCATAATTATATCAATTTGC
GTGGGAGTGGTTTTAACATAATATCAAATcatagtgcacacttaaagcaa
aTGGATCTCAGAAAACTCAAAATTAGACAAAGATAAAGATTAGACTACTT
TGACCCTGTTTACACTcaacggttccgtttcgctccgaaacgaaaatgaa
gtcattctattggttagaagtgacatAAAACATAAATTTAACCAATAAAA
Tgact Run BLAST on NCBI transcript from alignment at scaffold_228:578752..580006 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053377 ID=TCONS_00053377|Name=TCONS_00053377|organism=Clytia hemisphaerica|type=transcript|length=1255bp|location=Sequence derived from alignment at scaffold_228:578752..580006 (Clytia hemisphaerica)
agtcATTTTATTGGTTAAATTTATGTTTTatgtcacttctaaccaataga
atgacttcattttcgtttcggagcgaaacggaaccgttgAGTGTAAACAG
GGTCAAAGTAGTCTAATCTTTATCTTTGTCTAATTTTGAGTTTTCTGAGA
TCCAtttgctttaagtgtgcactatgATTTGATATTATGTTAAAACCACT
CCCACGCAAATTGATATAATTATGCTGGTATGGTTTCCACTATGTAGCGA
AAAAGAGTGCACATTTTAAAGCGAAATGGACTTAAATGATGTATGATGAA
GGGATAAATTAGACAAGGTATTGCATTGACGCAATTGGTTGTTGTTTTGT
TAAATCTCGCCTCTTAAAGATTTCAATGATATTTTTCCTGGTTAGAAATG
AAATGATTAAGTATTTTTTTCATCTCATGTGCGTGTTTGTAAGTACATTA
AAGAAGTTCATTCGTTCATCTCTCAGGGCTTCTATCTTAGGATAGCTAAG
TCATGGATAGGTTGCTGATATCCGTTCAATCCACTATGTAGCGGATTCGT
GCTCATATACccgtggttttgtagaggtctgcgatttagACTAGGTCATG
GAAAAAAGCATTGTATGCTCCTTAGAAAAGAAAAACGGAAGGtgtaaaat
tttggaaaaattttagtatttttttggTGCTTTTAATTGTGGAAAGTTAA
ATGTGTGATAGAAGAACGGTATGCAGTTCGTGTACCCAATTTTGCAGATT
ATTTTTAGGGGCATAATTTCTGTCTTGATACGATTGTCCCCAGTTCAAGG
TCTCAAGTTTCAAATGTTTAAACTTAAAAATGTTtacataatatttcaaa
attgttaaaaactttGTCAAGATTTGGTTAGTTGTGTAAAGTTTATGGAA
ATGCAATGAAAATTGAGAAACTAGCTCCTCCTTTATCTTTTGTCTTGAAG
TTTTCTTGGCTCAATACGGACTAAGGCAATGTCGACACTGCATACACCTA
ATTTTTATTATGAAATTTACGGGCTTTGTCGAGGGGGGTGGttgcatgtt
tttttataagaacggcGTCTTTTCATTACATCgtgaatattcttatagag
tacattcttataagaaaaagcaTTTAGTAGAGGGTAGTGCTTAATGGACG
AATGGATGAAATATGGTGTGCCGTTGTtatttgccaaaattgaggtaTTG
GCTTTTATTGTCCAATTTTATTAtcttttatttgcttaaaattcaATCAT
TCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053377-exon-scaffold_228-1491911889:578752..580006 | TCONS_00053377-exon-scaffold_228-1491911889:578752..580006 | Clytia hemisphaerica | exon |
| TCONS_00053377-exon-scaffold_228-1510915933:578752..580006 | TCONS_00053377-exon-scaffold_228-1510915933:578752..580006 | Clytia hemisphaerica | exon |
| TCONS_00053377-exon-scaffold_228-1575043694:578752..580006 | TCONS_00053377-exon-scaffold_228-1575043694:578752..580006 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_228 | supercontig | scaffold_228:578752..580006 . |
Blast
The following BLAST results are available for this feature:
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