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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053093 ID=TCONS_00053093|Name=TCONS_00053093|organism=Clytia hemisphaerica|type=transcript|length=1672bp gtgccactaactcgatcgggaagattcttccaaaattggaagattcttcc gaaatgggaagaatcctcccgaacgggaaattaacttAACACCCAAACGG GTTGACGGACTTCCAGATCGGGAAGAAGCGAGAAACTAAGGAAAACTCGA TCGGGTTGGaacttcccgtttgggaagtttatgcagttttttcacaattt aacaagatttctacggtaaagtctacttttctttcggtgaaaaaCCTTAG AATTTGATGCTTCTTCatctccaaaaagtttcaactttcgccggtcatcg tacagcttcgccgaaattcagtcaattttcaacttcccaaagaggaagaa tcttccaaaacgggcagaaaaaaatagagtaagttcttcccgttcgggaa ggttcttcccatttcggaagaatcttcccgatcgagttagtggcacagac tgattagtattacatgcattataaacgactccagtctacgtttgttcctc ttagatgaaactcgtcttagactatccCGTCTTTCTAAATGAGGAGCTAA TTTTAAGGCAACACTTTTGCTTGCCTACGAAAGATAAAAGATTCGTCTCA ACTTTCGGGTCGAAACTCAATGGGGGCTGTCTTGGTAATCAAAAGGACTT TAATAATATTGGTAATCACGAAGACAATAATGAAGTGAAGAGACATTTAA TTAATTCTTTGTTTATCATGGTTTTGTTTTGGCATTTTTTTGGTCCGTAC AAAAATAATAAAGGATGGTTTTACAATTTTCTCCTTACTTATCAGAATAA TACTTCATGGTAAATCTTTAAATACCTCACACACTCTCACAATAAACTTA TCTTAAAATACTCCCTCTCCCTCTCTCTGCTTTGTACATTAAAAAGTTGC GGTGATAAACGATAACAGGCCACTGTCAAAAAAGACATTTATTTTTGTTG GTTTGAAAAAGACAAGTTATTGgcattttgtgttggaaatTTTACGTGAT TGAAACTACTATTTCAAGTGCACAATATTTATGTTGGTCGATAATATGTC AGTCTAAAGTAGCTCATGCTATGGTTGACAGACCTGACTCTTTAAAATTG AACCTTTGTAAAAAAAGTTCTTGCTATACTTAAAGTTTATAGTAAAGCAT TACTTACTTTAAATAAATATGAAACTGataaaataatgttttcatcttaa aatatAAATGGATATAAATAAGGAGAAAACAGAATGAAGAGCAGTGCGAA ACGGAAAAGAAGAGCTTTaagcaaaataagatttgtcagTGATTAGGTTT TCCAGCCCATAGataagaaattgaaattgaagatCTGATTTCGAAGGgca taacaaaaaaataaaaatatttataaaaacaataaaatcgtAAAATCAGG TATATAATcaattaagtaaaatttttgaaatgatttaaTCCACAGGTAAA AGGAGCAGAACGAAAAGAAACGAGTGAAGGAAGAAATATTACTTGCTGAA ATAAGTGAAAGATGAATAATTCGTTACATTACATGCTGCGGAGGAAGCGC TTACATTATGGTGACTAGCCNAAGGTAAAAGGAGCAGAACGAAAAGAAAC AAGTGAAGGAAGAAATATTACTTGCTGAAATAAGTGAAAGATGAATAATT CGTTACATTACATGCTGCGGAG Run BLAST on NCBI transcript from alignment at scaffold_225:262743..264414 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053093 ID=TCONS_00053093|Name=TCONS_00053093|organism=Clytia hemisphaerica|type=transcript|length=1672bp|location=Sequence derived from alignment at scaffold_225:262743..264414 (Clytia hemisphaerica) CTCCGCAGCATGTAATGTAACGAATTATTCATCTTTCACTTATTTCAGCA
AGTAATATTTCTTCCTTCACTTGTTTCTTTTCGTTCTGCTCCTTTTACCT
TNGGCTAGTCACCATAATGTAAGCGCTTCCTCCGCAGCATGTAATGTAAC
GAATTATTCATCTTTCACTTATTTCAGCAAGTAATATTTCTTCCTTCACT
CGTTTCTTTTCGTTCTGCTCCTTTTACCTGTGGAttaaatcatttcaaaa
attttacttaattgATTATATACCTGATTTTacgattttattgtttttat
aaatatttttatttttttgttatgcCCTTCGAAATCAGatcttcaatttc
aatttcttatCTATGGGCTGGAAAACCTAATCActgacaaatcttatttt
gcttAAAGCTCTTCTTTTCCGTTTCGCACTGCTCTTCATTCTGTTTTCTC
CTTATTTATATCCATTTatattttaagatgaaaacattattttatCAGTT
TCATATTTATTTAAAGTAAGTAATGCTTTACTATAAACTTTAAGTATAGC
AAGAACTTTTTTTACAAAGGTTCAATTTTAAAGAGTCAGGTCTGTCAACC
ATAGCATGAGCTACTTTAGACTGACATATTATCGACCAACATAAATATTG
TGCACTTGAAATAGTAGTTTCAATCACGTAAAatttccaacacaaaatgc
CAATAACTTGTCTTTTTCAAACCAACAAAAATAAATGTCTTTTTTGACAG
TGGCCTGTTATCGTTTATCACCGCAACTTTTTAATGTACAAAGCAGAGAG
AGGGAGAGGGAGTATTTTAAGATAAGTTTATTGTGAGAGTGTGTGAGGTA
TTTAAAGATTTACCATGAAGTATTATTCTGATAAGTAAGGAGAAAATTGT
AAAACCATCCTTTATTATTTTTGTACGGACCAAAAAAATGCCAAAACAAA
ACCATGATAAACAAAGAATTAATTAAATGTCTCTTCACTTCATTATTGTC
TTCGTGATTACCAATATTATTAAAGTCCTTTTGATTACCAAGACAGCCCC
CATTGAGTTTCGACCCGAAAGTTGAGACGAATCTTTTATCTTTCGTAGGC
AAGCAAAAGTGTTGCCTTAAAATTAGCTCCTCATTTAGAAAGACGggata
gtctaagacgagtttcatctaagaggaacaaacgtagactggagtcgttt
ataatgcatgtaatactaatcagtctgtgccactaactcgatcgggaaga
ttcttccgaaatgggaagaaccttcccgaacgggaagaacttactctatt
tttttctgcccgttttggaagattcttcctctttgggaagttgaaaattg
actgaatttcggcgaagctgtacgatgaccggcgaaagttgaaacttttt
ggagatGAAGAAGCATCAAATTCTAAGGtttttcaccgaaagaaaagtag
actttaccgtagaaatcttgttaaattgtgaaaaaactgcataaacttcc
caaacgggaagttCCAACCCGATCGAGTTTTCCTTAGTTTCTCGCTTCTT
CCCGATCTGGAAGTCCGTCAACCCGTTTGGGTGTTaagttaatttcccgt
tcgggaggattcttcccatttcggaagaatcttccaattttggaagaatc
ttcccgatcgagttagtggcac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00053093-exon-scaffold_225-1491911889:262743..264414 | TCONS_00053093-exon-scaffold_225-1491911889:262743..264414 | Clytia hemisphaerica | exon |
TCONS_00053093-exon-scaffold_225-1510915933:262743..264414 | TCONS_00053093-exon-scaffold_225-1510915933:262743..264414 | Clytia hemisphaerica | exon |
TCONS_00053093-exon-scaffold_225-1575043694:262743..264414 | TCONS_00053093-exon-scaffold_225-1575043694:262743..264414 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_225 | supercontig | scaffold_225:262743..264414 . |
Blast
The following BLAST results are available for this feature:
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