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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053092 ID=TCONS_00053092|Name=TCONS_00053092|organism=Clytia hemisphaerica|type=transcript|length=964bp
tttcaagtcttaagaaaaatgtgtattttactgTTTTATTCAAGTCTTAA
GATATTCCGCTGAGAATTATTTTTCTTGCGTGATATTACTTTTTGTTACg
tattttttgttattatttttttatctgtattcttatatattttctttttg
ttatatATTTCCTTTTAGCGtgtatactttaggcgtacaaactttcgcga
ggtcgaaaattcacgaaattcgtgacatttattttctttttcgcgagcat
aatcTTTCGCGAATTAAgacataaaaatgtaaaatttcacttgaaaaatg
gcttagagggacaaatacttaaACAGACTGAAAAATCTTACAtcttaatt
caaaattttacgttttacAGGTTTTCTtatttgtcaagaatttttcgcgg
gaATAAATCCGGGAATTTTCAAAggcatttactttcgcgaaaagggctaa
aattcgcTTATACGCCTAAAGTAAACTTAGAgacaaaaaatgtaaatata
taTTCCCTCAAAATGTTTATAGGGTGGAGACCCACAGCACAGCCAAGTAG
GAATGCCCTCTTCGTATTTTTAGACTTATTCTATTTTTAGCCAAGGTAGA
TATTCAACatattttattgaatttgaaaCGTAAACGAGAAAGGATTCTCT
TGCATACACTACTTCAAGCTTGGCTTAGACCTTCCTTAGCTCttgattca
attttttctcaatCGTGTCAACTTTAGGCGATTCCTTATTTTAAGACGGC
TGGTGTAGTTATATTGATGCTCCTtacaagttttctacttcctatttttt
actgagttaagtcgtctagcatgctagactactcTGAGGAAAGGTCAGTC
CTGTTACGGATTGGCCCCGTATCAGAAAACTATCCTTTCCCCAAGGTGAT
TCGGCTAGACGTCGCCATAGTACGTTTCTCCTAAACTCATTGCCTTGTGT
AGATTTTGAGATTC Run BLAST on NCBI transcript from alignment at scaffold_225:255390..256353 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053092 ID=TCONS_00053092|Name=TCONS_00053092|organism=Clytia hemisphaerica|type=transcript|length=964bp|location=Sequence derived from alignment at scaffold_225:255390..256353 (Clytia hemisphaerica)
GAATCTCAAAATCTACACAAGGCAATGAGTTTAGGAGAAACGTACTATGG
CGACGTCTAGCCGAATCACCTTGGGGAAAGGATAGTTTTCTGATACGGGG
CCAATCCGTAACAGGACTGACCTTTCCTCAgagtagtctagcatgctaga
cgacttaactcagtaaaaaataggaagtagaaaacttgtaAGGAGCATCA
ATATAACTACACCAGCCGTCTTAAAATAAGGAATCGCCTAAAGTTGACAC
GattgagaaaaaattgaatcaaGAGCTAAGGAAGGTCTAAGCCAAGCTTG
AAGTAGTGTATGCAAGAGAATCCTTTCTCGTTTACGtttcaaattcaata
aaatatGTTGAATATCTACCTTGGCTAAAAATAGAATAAGTCTAAAAATA
CGAAGAGGGCATTCCTACTTGGCTGTGCTGTGGGTCTCCACCCTATAAAC
ATTTTGAGGGAAtatatatttacattttttgtcTCTAAGTTTACTTTAGG
CGTATAAgcgaattttagcccttttcgcgaaagtaaatgccTTTGAAAAT
TCCCGGATTTATtcccgcgaaaaattcttgacaaataAGAAAACCTgtaa
aacgtaaaattttgaattaagaTGTAAGATTTTTCAGTCTGTttaagtat
ttgtccctctaagccatttttcaagtgaaattttacatttttatgtcTTA
ATTCGCGAAAgattatgctcgcgaaaaagaaaataaatgtcacgaatttc
gtgaattttcgacctcgcgaaagtttgtacgcctaaagtatacaCGCTAA
AAGGAAATatataacaaaaagaaaatatataagaatacagataaaaaaat
aataacaaaaaatacGTAACAAAAAGTAATATCACGCAAGAAAAATAATT
CTCAGCGGAATATCTTAAGACTTGAATAAAAcagtaaaatacacattttt
cttaagacttgaaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053092-exon-scaffold_225-1491911889:255390..256353 | TCONS_00053092-exon-scaffold_225-1491911889:255390..256353 | Clytia hemisphaerica | exon |
| TCONS_00053092-exon-scaffold_225-1510915933:255390..256353 | TCONS_00053092-exon-scaffold_225-1510915933:255390..256353 | Clytia hemisphaerica | exon |
| TCONS_00053092-exon-scaffold_225-1575043694:255390..256353 | TCONS_00053092-exon-scaffold_225-1575043694:255390..256353 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_225 | supercontig | scaffold_225:255390..256353 . |
Blast
The following BLAST results are available for this feature:
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