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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053017 ID=TCONS_00053017|Name=TCONS_00053017|organism=Clytia hemisphaerica|type=transcript|length=1613bp TTTGTCATAAATTTCCCAATCATTTGGTTCAAAATAAAAGAGCTTGAACT AATCTGAAAATGCATTTTTGATTCAATCTTctgaatttgtttgaaaaatt tgttcgatgtttagaaatattcaaaacatttgacaaacacaaaagtttaa aattgtaCTGAGTAACATGATTATTGCCTTTTTGTTTATTGCCAAAAGAT TGAAATGTTCAAAGtttgtacaaaataaaaattatatattatttccAATT TCGGCAAGTTTATTATCAAATGTAGTCCAAAATGTACATAATGGCATTGt gtaaaaatgttgaaaaatattcccaagcgccaaaatgataaaaattagta GTCACCACTCCCATTCAAACGTTCAACACTGTCAGTCATTGGTATCAGGT AGTTTCACTCAGGCGTCAAAAGATACGTACAGAGTAATACAAGAATATTT CAGTCCATTATTTCAACGTTCCCCAAATATCATTCAGTCATTATCATTTA ATATAAAGCTATTCAAATccatatctcattatatacaTTTCACGTCAATC CATTCTTCACTTGGGTAAGGCATCAGGTTACGTACACAAAGTTTTACAAG GACATAAAAAGTAAAGCCAAGTTCAGTTGTAGGTATACCCGGATTATAAT CTTATAATACTttattatagacctttttttaaagaggcaaccctgttgaa taattatgtagtccagcaaaataacaatgatatagccatgcataattatt aatatgcatgaaacagtaattatgcatggctgtatcattgtttttatgct ggactacataattattcaacagggttgcctctttaaaaaaaggtctattc aatcCATCCATATAAgtccatttcattttatatgCCATTAAAACTCCCAA CTTCCAATTCATCCAAACCAGATCGTGAACACAATTGGCATTCAGCCATT GAGTGCTAGCTGACATCAGTACCAGAGATATAATTATACGTAGACATagg accttttacatagttctTCTGTCCTTATGTCTTTATTCATTCAGCAGCAG ACAGTAGAAAATCAGCATCAGATTTGTTTAGTTCCCTCTATTATAGTGTT CGTTAGCAGTATGAAATTCCAATGGCATTTTGCTTGATCAGaagaacatt cttcatattcaatgtgaaagaaatcaagaaagtgACAAGTGATCCtcttg catattctgttttgcTTTGGAGAAACAGCTTGGCTTAAACATTTTGACAG TCTGGTTGTGGTTGTGGctagtttgtttttgtttttgttgaaaaatgata taaacCATCCGTAGTTCGGACAAGATtatttttcctatccgtcattaTGG GACTTTGCTAATCAACATCCGATTCGCGTACACCCTtgaaatcactttcg ttttctatgtgtaccagggcttatatcccccgtcaacgcgtcatcagaat catcaatagcgtaagggggttaaataagccatggagtcgagggtgccata cagggctgagctggttcccaatggtcctaaacctcgtgggacactccctt gcaatggattagacccattgaagtccagcgaagggggcagaaccgACGAA TTTTCACTaaaat Run BLAST on NCBI transcript from alignment at scaffold_223:55021..56633 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053017 ID=TCONS_00053017|Name=TCONS_00053017|organism=Clytia hemisphaerica|type=transcript|length=1613bp|location=Sequence derived from alignment at scaffold_223:55021..56633 (Clytia hemisphaerica) attttAGTGAAAATTCGTcggttctgcccccttcgctggacttcaatggg
tctaatccattgcaagggagtgtcccacgaggtttaggaccattgggaac
cagctcagccctgtatggcaccctcgactccatggcttatttaaccccct
tacgctattgatgattctgatgacgcgttgacgggggatataagccctgg
tacacatagaaaacgaaagtgatttcaAGGGTGTACGCGAATCGGATGTT
GATTAGCAAAGTCCCAtaatgacggataggaaaaataATCTTGTCCGAAC
TACGGATGgtttatatcatttttcaacaaaaacaaaaacaaactagCCAC
AACCACAACCAGACTGTCAAAATGTTTAAGCCAAGCTGTTTCTCCAAAgc
aaaacagaatatgcaagaGGATCACTTGTcactttcttgatttctttcac
attgaatatgaagaatgttcttCTGATCAAGCAAAATGCCATTGGAATTT
CATACTGCTAACGAACACTATAATAGAGGGAACTAAACAAATCTGATGCT
GATTTTCTACTGTCTGCTGCTGAATGAATAAAGACATAAGGACAGAagaa
ctatgtaaaaggtcctATGTCTACGTATAATTATATCTCTGGTACTGATG
TCAGCTAGCACTCAATGGCTGAATGCCAATTGTGTTCACGATCTGGTTTG
GATGAATTGGAAGTTGGGAGTTTTAATGGcatataaaatgaaatggacTT
ATATGGATGgattgaatagacctttttttaaagaggcaaccctgttgaat
aattatgtagtccagcataaaaacaatgatacagccatgcataattactg
tttcatgcatattaataattatgcatggctatatcattgttattttgctg
gactacataattattcaacagggttgcctctttaaaaaaaggtctataat
aaAGTATTATAAGATTATAATCCGGGTATACCTACAACTGAACTTGGCTT
TACTTTTTATGTCCTTGTAAAACTTTGTGTACGTAACCTGATGCCTTACC
CAAGTGAAGAATGGATTGACGTGAAAtgtatataatgagatatggATTTG
AATAGCTTTATATTAAATGATAATGACTGAATGATATTTGGGGAACGTTG
AAATAATGGACTGAAATATTCTTGTATTACTCTGTACGTATCTTTTGACG
CCTGAGTGAAACTACCTGATACCAATGACTGACAGTGTTGAACGTTTGAA
TGGGAGTGGTGACtactaatttttatcattttggcgcttgggaatatttt
tcaacatttttacaCAATGCCATTATGTACATTTTGGACTACATTTGATA
ATAAACTTGCCGAAATTggaaataatatataatttttattttgtacaaaC
TTTGAACATTTCAATCTTTTGGCAATAAACAAAAAGGCAATAATCATGTT
ACTCAGtacaattttaaacttttgtgtttgtcaaatgttttgaatatttc
taaacatcgaacaaatttttcaaacaaattcagAAGATTGAATCAAAAAT
GCATTTTCAGATTAGTTCAAGCTCTTTTATTTTGAACCAAATGATTGGGA
AATTTATGACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00053017-exon-scaffold_223-1491911889:55021..56633 | TCONS_00053017-exon-scaffold_223-1491911889:55021..56633 | Clytia hemisphaerica | exon |
TCONS_00053017-exon-scaffold_223-1510915933:55021..56633 | TCONS_00053017-exon-scaffold_223-1510915933:55021..56633 | Clytia hemisphaerica | exon |
TCONS_00053017-exon-scaffold_223-1575043694:55021..56633 | TCONS_00053017-exon-scaffold_223-1575043694:55021..56633 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_223 | supercontig | scaffold_223:55021..56633 . |
Blast
The following BLAST results are available for this feature:
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