TCONS_00052954 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052954
Unique NameTCONS_00052954
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1707

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052954 ID=TCONS_00052954|Name=TCONS_00052954|organism=Clytia hemisphaerica|type=transcript|length=1707bp
agaaaaacaaaacaaaaaaacaacacacAAAACCTCAAATCACTGAGATT
TTCAAGAATACATTTTGAATATATATGATGCTAAGGTAACAAAAGTAGTA
GAATAAAACAAGTTTTAGCAGACACGAACATTCCGTATAATGAAGTTTTG
TTCTTTGGTATTGCTCACATCTTTGATAATCAATGTATCAGCTTTGACCA
GAGTTGATTTGACCATCAGCCCATCAAATCCCTTTGAAGGCGATACCATA
ATCTTCAACTGCTCTGTACCAGAAACAGACTccgacattacatcatggac
atTTCGCAAAGGAGACACAGTATTGCAAACAGGGTCAAACCACCAATTTA
ACTTGACATCAAGTGCTACTTTAGCAGACAATGAAATTTACACATGTGAA
GCTACCCATAATTCATCAGCATCTATGAATTCAACTGGACAAACACTCTC
AGTTCAAGAACTTTTTGCTAAACCCACAATCTCATTTGGATCCAAATCTG
CATTCAAAACTGGAGATAAAGTTGTTATATCATGTTCAACAATTGTTCGC
AAAGAAAATACGGAAGCTTCATACTCCATCCGAAACAAAAACAATGAAGA
AATATCAGCCACTAAAAATATCACCATTGATCCTATCAAAACTGGAAACC
AAGGCGATCACTCATGCCGTGTCACTGCTAACGGTATCACTAAAGACTCT
GgtacaaaaatactttttgttaaTCTGGGTCTTTCCATCCCAACATCAGC
AACAGTCAATGAAGGTTCCGCCCTCTCTATCAATTGTACATTGGGCGGAG
GGGAATCTGGTGCTAGCTTTACATGGACAGAGAATGAATCTACAATCCCT
GGACAGACTTCACAGATGTTGAGAATTGAGAATGTTAACCGTACGATGCA
TCAATCAGAATATAAATGCAATGCTGTATTGGGTGGCTTCAATGCTGCAT
CGAACACAGCAAATCTCACTGTTAACTATTTGGACAAACCAACAATCGCT
GGTAATACGAAGGTCAATGAACATGATGTTTTGTCGCTACAATGTGTTTC
AACTGGACGACCAACCATCACTACTTATAAGTGGTTCTTGAACGGTACTG
AAATCGTGGATGCAACTAGTCAAAGATATGAGAAAGCCGGCTTCGAACAA
TCAATGTCTGGTGATTACTCGTGTGAGGTGTCCAACGGAGAATTGAACCA
GAAATCAGATAATGTAGCTGTCATGGCCTTGTatctCGGTACTCCAACCA
TTACAGTCAACCCGACAGACGGTATCCCCGTTAAAGAGAACAACAACCTC
ACTCTAACATGTAACATCGCCAGTGCAACATCCCTCAACAGATCTTCTCT
TAATTACAACTGGACTAAAGGTGGTGAATCCCTTTCTACGAATCAAGTAT
TGGAATTAGTGAATATCAAGAAACAAGATGCTGGCAATTATACTTGTACT
GTCACCAGTGATGCTACCTCACTGTCAGCAATGGCAAACGTAAATGTTAT
AGTGCATTTTGCCCCTCATGGTATTTCAATCTCTGAAGAAGGCCGCCAAG
TGTTACTCAAAGGAAGTTTGTTCAACGCCAGGTGTTCTGTAGACAGTCTT
GGATTGCCAATTGGTGAATTgaaatggtttaaaaaaaaaaaatccattgT
AAAAACTGAGGAATCTAGAGACCTTTACCTTAGTTTTGTCGGCGATGGGG
TACAGNN
Run BLAST on NCBI

transcript from alignment at scaffold_222:153820..170146-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052954 ID=TCONS_00052954|Name=TCONS_00052954|organism=Clytia hemisphaerica|type=transcript|length=16327bp|location=Sequence derived from alignment at scaffold_222:153820..170146- (Clytia hemisphaerica)
AGAAAAACAAAACAAAAAAACAACACACAAAACCTCAAATCACTGAGATT
TTCAAGAATACATTTTGAATATATATGATGCTAAGGTAACAAAAGTAGTA
GAATAAAACAAGTTTTAGCAGACACGAACATTCCGTATAATGAAGTTTTG
TTCTTTGGTATTGCTCACATCTTTGATAATCAATGTATCAGGTATCAATC
ATTATCATTCTTATATCTTCATTATACCAACCTTAGAATTACATACCGTT
TATTTATTAGTTGTTAAAATAACGTCTAATCACCCTCTTTTTGATTTAAT
TTTTTTTCTTCAGAAATTTGCATTTTAGATTTATCTGTATAAAGCTCAAT
TCTTACACTTCTTAAGTGATTGAATCTATGGTGTTTTTATTCAAGTATTG
TTTTTAAAAGATTTCTTCAAGGTGGCTTGGGTACTTTTTAATAAATATTT
ACTAATTTATATATAAATTTTTTTTTTCTGTTAATTTTTTTATTATTTCA
AAGTCTCCCTCGACACTTCCCTTTCTGTCTAGGGAATTTTAGTTACAAAT
ACTGTGGAACTGCTGAGTTTGAAAGAATGAAATTACCAAGAAATTGGTGA
CAGGGAAAATCTAAATTACCTACCAATAACTTGGCTGTGGAACCATTGTA
GTTTCTTAAAAAAGATTTAGAATATCATGGATTTGCCTATGTTCACAAGA
ACACTATTAAGTTTTGTATCAAAAATTAGCACAAGAATTTTTTATCATCA
ATGTTGCAGCATAATGTAGCTAAATGATACTTGTAAAATGTGAAAAACAA
GTATGTTACATGTAAATCATATGTACGTTGCCACACACACCTTTAGCTTT
ACACACTATGCAAACTCACACACACACAAAACACTAATGACACTACTTTA
ACTTTTCACCATAGGAAATTCTGTGGATTTAAGTTTCCTACCTGCACAAC
CAATAGTTGGTCAAAGATTAGAAGTCAAATGTGCACTTGCCAATCCTGAT
CCATCTATAGCCTTCTTTGGCTATAGATTTACAAAGGCAGGCACAACACA
ATCAAAATATGATCTTCAAAGTTTCCCTAAATCCAAGGTTATTGAGAAAT
TCAGTCAGGATAACATTGGCACATATTCATGTGAAGCACGCGATAAAGAT
GGAAACACACCTTTTTTCATGCGAACACCTATATCAGTCCCACTACCAGG
TTAATATTCCCCTCTACCCTCCCTTCTCCATTAAAGAAGGTCATAGATTA
GAATGTTAAAAGATTTCTCTCATCCCATTAATTTTCACGCCTTTTTTACA
CAATTTTTGAAATACACTATCCCTTTATTTTGGTTGGGTATTTCGTAATT
TCTGGCATTTGAGTGTTTTTACGAAAATAAAATGAAATACCCTGTGAAAA
TGTCTTGCTCCACTATCAAACTAATTTTTGTTTCTTTGAAGTAAAACTTG
AATTAGGCCAATATTTATTTACCACCCACTACATCCTGTGTTTCCCTTCT
AAATCTTCTTTAATGGTATTCCTTACTATCTGCTACCCTATTCTTTGTGT
CTCACTTCTTGGACCTTATTAAAATGTCTTTGCTAAATATAATTACTAAC
ACACTAACAATTTTGTTAGCTAACTATCTGTGTGGTGTGTTTATGCTATG
AATTATTGTGATTTTAGAAATTGTACTGTACGTATAAGAAAGAATTAATC
TCGACAGTCTAGTTATGAATGCAGATCCATTCATTTCAAGTACAGGCCAT
TTCCTATTGACAAAAGAAGCCAAATGTTGATCAGGAAAATGTGCTTTTTA
ACTCCTAAGTTTGGTAAAAATAAGGATCTTCTTCACTATGGAGATCATGG
CTAAGGGTGAATCTAGGAAAACAAAACAAATTTTGACCACTTTATAATCA
ACACAAGACATTTTGTATCAGTAGATTCTGTTAACCTACTGTATCCCCCA
TATTATGATCTGTTTATTGTTATGTTAACAAACAATTTTTTTCACGATAT
AAATTTATTTTATGACTCCAATTTATTTTACAGCTTTGACAGTCACTCTA
ACGGCAGACACACATGAGCCTCTAATTGGGAATAACATAACATTAACTTG
CAATGCAGTAAATACATCAAATTCGGAAATCAATACTTGGAATCTCTACA
GGAATGACTCATTATTGATAACACAATCTAATAACACTTTTCAAGTCACT
ACCAATGAATTTAGCAATGAATATTTTTGTTCTGCTAAAAGTGACTGGAC
TTTTGATGCCAATTCTACCAAAATACAGATAAAAGCAAGAGGTACAAATA
GCAACACTGTTAGTTACAAACGATAACTGGCCTCAGATACTGGTCATTGA
CATGAAAGTTCATTGTATTTTTGCTTTTAATTTCCCTGAAATGTCTCTAA
GCTATCATACCAATTTTTACATAGACTTAGACTTACACATAGACTAAAAA
TAAACTGGTTTTGTTGTCAAAGATGCATTTGTCAAAGTGTATACTCTCAA
TGATATTAAAAAAACACACTTTTTATAGCATTTTCAGGTATCAGAATCTT
GGTAAACGAACCCTATCCTGTACACAACAGCTCATTTACGTTGACATGTA
CTATTGACAAACTGATTAACACTGAAGTGTCGTACTGGACATTCCAACTG
AATGAAAATACTGTTCAAAACTCGACCTTAAGTACACTTACTGTTGACAA
AGCTTCTGACAATAACACTGGAAATTATACCTGCACTGTTGTAAGCGATA
TGGCTGACATTGTGACATCAGAGAAACTCAGTGTATTGACTCGAGGTATA
ATAGGCTTTATTTTTAAAATAAAGCATGTCGACACTGTTAAAATCATGAC
ACTAATATTCAAACATTCACAGTAATAAAGCATTATATACAACTCTGATA
CATTCCCAAAGCATGTTGACTTTACTAAAACCATTTTTTAAAATAGATTA
ACATAACACATTCAATGATGAGCCATACAGTTAACACAGATCATTCAAAT
CTCAAGTCAAAGTATGTTGACTTTACTCAATTCGTAAAAATACTGATTTT
CATACATATTAACATTGATGAGACATAAACCATTCTAATACAAAACATTC
CCAACTCACGTTAGCTTGGTGAGGCTAGGTGAGTTATACTATATACACCA
CTCTAACACGAACTATTTCAAATCCAATTCATCAAAGCATGTTGACTTTA
ACATGTAGCACTCATATTCAATATTTAAATGATGATGTATACACCATTCT
ACAGTAATACAAATCATTTCAAGTTTTCTTTCATAGCATGCTGACTTTAC
TCAAGTCGTTATAGTACTGATATTCAATACATTAAACACACTAATGAGGC
ATACACCATTCTAATACAAATCATTTCAAGCTCTAGTCAAAGCATATTGA
CTTTACTATCCTTATATTTGATATGCATTAACACTCACATTTCACATTTC
ACACATACACCTTCTTCATTCTGATAAAAATCAAGTTTATTCAAGTTGAT
GCACATTGAAGAGTGCTCCATTAATTCAAGTATTGCACTAACCACGTTGA
ACATGAACACAGACACATTGTGAAATCCTACAACATTTCTTAGATATACA
TTCATAGGCTTACATACGTATACTTTAGCATGCATTTTTGCCTGACACCA
TATAATCATAATATAAATTTGATTTTCTTTATAGCATGGCATGAGTATTT
TCATTTTGATATCCACCCTATAAAACAACAAACTACACACATATACATGA
AAACAAAATTATAAAACTTAATTATAAAACATCAAACATATCAGTCATTT
TTCACACACCAGTATAGCCTTCAACACAGAAAGTCAGATATGAAGTAATG
AATTTTCTACCCTTCTTGTACACATACACACCACACACCACATCATCCAA
ACTAAAACAATAGTACATAGTTAGTTTATTTTGAAATTTCATCTCCAAGT
CTCCCTTATTATTGTCTACTGACGTTAGAAAAATGTAACAAAACACTATA
TCAAGTTACATTCCTTGGCTTAAGAGAAGGTTATTTGGGGTTATAACACA
CATTCTTTCAGAAGTGTTTAGAATAACAATCACCTAATCAAAATAACAAC
TTGTCAAGATCACACAAAAATTAAAAACTCTTACTATAGTTTTTGTTTTC
AAGCAAAATTCTCCTTGTCTACCATCCCAATTTTTGGTGTATAGTGGTGT
ATACCTTTAGATAGATAGAGTCGATATTTTTCGTGGATAGCCCAGTAATC
TAGGACTTTTAGACAGTCTTTCGATTGTTTTCATGGGGTCCACAGCCAGC
CGGCTCTTCTATCTATGAACTGAACGAAACATTGGAAGGAGGGGGGATTC
GAACAGCGAATCCCTGGTTTCAGACGCTGACGCACTACACCACTTGGCCA
TCGCTCCTTGATAGAGTGAGTAGTAGAGTGAGTCCAGTTTACCCATTACC
AAATTTGATAACCACCAATACTATTCATCAATGTGGTGATCTTTACGCAG
AAAATGTCATTTTCTATAATTTACCACTACCAGCTCTCCTTCCCATCTCT
ATTTTCATATTCATCATAGATGCATATTCCTTTACACACTAGATAGGGGT
AACTGCTCACATATTTCTCGTGGAAGTGTGTCCAGTTTTCAAATCCAGTT
TTATAGTTTGCTTAGATTGGTAACATCAGTCATAACATTTGCACCTTATA
TTATAAAACAAACTTGATTTCTTGAAAGCATGTCAGATGTACATTTCGCA
TGATATTTTTTGAGAAGTTTGAAGTTCAAAAGTCAATTTAAATAAGTCCA
TATTTTCTATACATGCCATCACTAACATTCATAACATACATTACGTAATT
GTATTCAAAATCTCATTTCTTGAAAATACCAATATAGCACCAGCCATACT
TGCATTGTATAGAGTTGTGAATAATATCATTGAAACCTTGTTGGAAGTTC
CTCATCCAAAGTTTCAAATTCGCTACATAAAAAATAATATAGAAACACTT
ACTTCACTATAGATTACTTTAGAGATAATCTGGATTCTTGTATGGATGTG
CCAATCATGTCAATACCAGATACAAATACTTGCATGATGTATATCTCTGT
ATGATATATTCACAACAATCTTACCTGATTTGTAAAGGATTAAATGTCTT
GACATTNTCATAATTGCATTTTATAGAGTTGTGAATAATATCATTGTAAC
CTTGTTGGAAGTTGCTCATCCAAAGTTTCAAATTCGCTACATAAAAAATA
ATATAGAAACACTTACTTCACTATAGATTACTTTAGAGATAATCTGATTC
TTGTATGGATGTGCCAAGTATGTCAATACCAGATACACAGACACTTGCAT
GATGTATTTCTCTGTATGATATATTCACAACAATCTTACCTGATTTTTAA
AGTCTTAAGTCTTGTCTTGACATTGGAAACTCATCATTCAAATTTCAACC
CCCATGTCCAATGATACATATTCATTCATAAAAGCATGTCAATCATTGCA
TATACATAATATCCACTACACTTATAAATGACTGATATTCTTCAAAACTG
ATCCCTCCAGCTCCAATCTAGATTCATTCAACATTCGTGAAAGCATGTCA
ATTATTATATCAGATGTACAATATCTACTACACAATCATATTCCATACTT
TCATAATATACGAATACCAAGACCATCCACCTAAATCATAACAAATAACT
GTATAACTTGAATCTTCAAAACCTGATCCCTTTAGACGCTGCCAAAGTCA
GTATCACCAAAGCTAGTGTTATCATCAACAATCATCAACTAGCCTGGGTC
AACAATGCTACTGAAGTCCAATTGACATGCAATAGCCCGTTAGCTTCACC
GCAATACTCTTGGTCAAAAGATGGTATTAGTCTTGACCATGATACGTCCA
CGTATGTAGCAAATCTTGTGGTGCCAGACGGTGCTGGCAAATATATGTGC
AGTGATGGTCAACCTGCAAGCAATGCGATTCAAATTCAAATGCTAAGTAG
GAAAATGGTTTAATTTTTTATGCATGCAAATACAGCATAGTGTGCAAGGA
AAAAATTATAATTAAATTGATAATAAGAAAAAACTAACATTAAGTTTTAC
CAAAACACCAAAAATCCCACCTAAAGAAATTAATCCCCACCTTAACTTGT
TCCTCCCACCTAAAACCTGAAAATTTCCAAATCCCACTGGAAATTTTCGA
CCCAAATTACCAAACCCCCCACCCACTATTCTGATAGGGGGGTTGCACAC
TATGGTTGCAGTATGATACTTGGAGGAAACAAAGTGACTTTAATTGTTAT
CTATGACTTAAATAACATTGTTAAACCATCTATTCTCTGCTGATTTGTTT
GTATCCAAAAATAAATTATCATAAATTTATCCTCTTTTAGAATCAACATC
TCAACTATAATCTTTATTTTTCGTTTTTAAAGTTTCATTGTATATGATAA
GGGTTATTATTATATACCTGTAGGCAAAAACAACCATTGAATAATTCCTG
ATATACCATGGCTATTATACCACGGTAGAATTCTTTTTTCAAATTTTGCT
TTCAAAGTTTGATTTTTTTGTCGCTCTTGTTGTTATCAAAGAAATTCATT
GAAATAAATCTATTGTCTATTTCAGGAACAAATTTTATGACTCAAAGTAA
TTGTGTCATCACAAGCGACTTGAAGTACAAATGAATTGGAACGTTCTCAA
GCGTTCCTGGAACGTTCTAGATCGTTCCAGAACGTTCAGAAACGTCTCAG
AACGTTCAGGAACGATGTAGAACGTTCTAGGAACGTTCTGGAACGTTCTA
GGAACGCTATGGAACGTTCCAGAACGCTCATGAACGATCCAAAAGCGTCC
AAAAGCTAATAGATTACTCAATAAGAACGTTAGGGAACGATATCGAACGT
ACAGGAACGTTCGTGAACGTTCTTCTGCAATGTTTCTGAACGTTTCAAGA
CACTCCTAAACTAGTAGTAAATAACAGGGAACGATCAGGAACGTTCAAGA
ATGTTCTCTGGCGTTCTAACAACGTTCCTAAACGTTCGAGAACGTTCCCT
ATCGTTCGTTTTGCTAGAACGTTCCATTTTATTTGTATTTAAAGTCGATT
GTGATGACACAATTAAGAAAATCATTAAATAAGAAAAACATTCGAGCGTT
CGATTATGGGAGTGTTTTAAATGAAACGTTTGACTATTGACAATGACATA
TTATTGTTTTGTTTTTGCCTCTCCATTGAATAATTCCTGATATACCATGG
CTATTATACCACGGTAAAATTCTTTTTTCAATTTTTGCTTTCAAAGTTTG
ATTTTTTGTCACTCTTGTCTTGTTTATCAAATAAATTTATTAAAATTAAT
GTATTGTCGATTTCATAAACAAATTTTATGACTCAAAGTAATTAAGAAGA
TCATTAAAAAAAAACAATCGAACGTTCGATTATGGGGGTGTTTTATGTGA
AACGTTGACTATCGGCAAAATGTTTTGTTTTTGCCTCGAGGTATATAATA
AAATATATATTCAATATGTTTTCGTTGGTTATTGGATTTATTAACCCTCG
GTGATGTTTTACCTATCGAATATCTGCTTATTAAAAGTAATTTAAAAATT
AACTTATCAATTCTTATTACCTTTTGGTAATAACTGTATATTAAATTTAG
ATTAATGACAAAATAATTTTAATTTTTTGTTTCAGGTTCATTAAAAGCTC
TGGCAAACAGCAATATTAAACTCGTCTTAAAAAATTTAAATCATTGGTAA
ATTTTTAAATCAAGTAGGCTAGCATGTAATTAATTTTTTTAATCAAGCTT
TTTAAGGTTGTCAAAAAAACGTTCATTTTTAAGAATTACTTAGAATTATT
TAAGAATTTTACATCATTAATATATCATTATCACTAATTCTTTTGCCCTA
TTATACTTAGGAATTAGTGCTAAAATAATTAGATATTTTTCCCCTTTTAT
TTTTCATCATTTGTTGTCTTTAAATAAGTATAAAAAACACTAACATTAAA
CATATAGCACTAATGTTTTTTTTTAATATTAATTTATTGATAATTAGCTC
TACGTATGGAGCACCCTGTTACCACAATTATTAACTTATTTTTATTAAGC
TTTTTTATGTTTGTGTTTTGACAACTAACCAATTGCAAGCTCTTTGCTTT
CATTAATTTTGAGAAAACTAATGGCCATTTTTCCATAATTTGTTATTCGA
GAAAATAGCAACTTGAAGGAGTCTCCGATATTGATTTGGTATTAAATAAT
TGATTTTAATTTTCAAAAGAAGAAGTAAGAAACAGCTATCAGGTTAAAAA
TGGAAAGATTTAGTTGCAATTCTCACTCATGAATTATCTAATCTTCACGA
TTTAAAAAAAAGACTTAATAAAAGAGTCTCTAACCTTCTCATGTACTCTG
TTCTCTCATTCATAGCTTTGACCAGAGTTGATTTGACCATCAGCCCATCA
AATCCCTTTGAAGGCGATACCATAATCTTCAACTGCTCTGTACCAGAAAC
AGACTCCGACATTACATCATGGACATTTCGCAAAGGAGACACAGTATTGC
AAACAGGTTTCAAATTTATTTACATTGGGTTTCATTTAGGCATACACGTT
TCTTTTTTTATTAGAACACCTAAAATTTGGCTGAGCCTGGATGTGCTTAT
TTTTTTAGCAATTTTCAGCCTAAAATGTTCTTAATTTTTCAGACTACTTT
AAAAATCGACTATATCGTGCAAAATAAAGAGCACTTAAAATTGGTAAATT
TTGGACAATATTTGACTCTCGGTTTTAGAAAATCCATCCCTAAGTTCGGT
TAAAACTTACAGTTTCTTGTCATTTTTTTCCAAACTGAGGCTGGGCATGT
TTTTACGATGTTCTTAACGAATTTTAGCCTCAATGTTCTTATAAAGTGGG
TTCTAATAAAAAATAAAACGTGTAGGGTAACAGTTCATAAGCCTCATTAT
GCTTCATAGCAAATTTTTTTCTCGAGCTTTAGCTTTGCTATGCTTATGTA
ATGTGAAATTGAGTTGTCTCGGATTTTATTTCTGTTAAATTTTTTATACT
TCGTAAACTGAAGCTTAGCATAAGTTTTTCCAAAATTTAAGTCTGAATAT
GCTTATAAGCGTTATGCTTATAAAAAGGGTGTACTTATTGTCTCAATACT
ACGCTTTTTTATAAAAATGTTCTCTATAAGAATATTCATGATGTGATTAT
AGCCAAAAATTTAAGAATAATATTAAAGATATTCACAAGACAATACAATA
GAGTCGAATACGTACAAGGAACACAAATCTGTTCAAGTCAAGGAAATTTC
GAGTTATTGAGTATTATAAGTCATTTTTAACTGAAGGGACCATAAAACTT
GTTCGAGTTATGGAGACATTCCCAGCTACAGAGGTTCGAGTTGCAGAGAC
TCCATTGTAAAGAATATTCGGTGAAATTGGCCAAAGTATTTAAGAATATA
TATGTTGGGAATATAATAAGATAATATAACAATAATCATACGTTTTACGA
TCGGCTGAAGTGTTCACCCAATCAGATATCAAATTTTGTTTCATCGAAGG
GTTTACATGTTCAACTAAAAAAACGCACAAAAATGGTGAACACAAGAACC
TAACAGATATACTAGGCTTAAAAACTCAAAAAGTTAAGAACATCCGAAGA
CTTAACAAAAATTTTAGACGTTCTTATAAGAAAAAACTTGTATCGTTGCA
AGGGTTTTGATGAGTGTATTCTTCTGTCATTTTCAGGGTCAAACCACCAA
TTTAACTTGACATCAAGTGCTACTTTAGCAGACAATGAAATTTACACATG
TGAAGCTACCCATAATTCATCAGCATCTATGAATTCAACTGGACAAACAC
TCTCAGTTCAAGGTATGACAAATTTAAAGAGTTTTTTTTAGAATATTTTT
CTTCAAAAGTAGAAACGATAATTTCATAGTTTTTCACGCAAAAGCAAAAT
CGATCATCAGACTCTATCAATGACTAGGCTGCACGCACCCTCTCTGATAT
GCTTTGATATGGTGTTTACGCATCCCCTGATGTGTTCATGCCTGAACTTA
AAAAATGGCTTTCTATTCGGATAGGTTCAAAAGGTTGAATGGTTCGCGTT
GCTCATAGGTCCAGACCCCCGGTAGAGGATTGATTAATGAGCGACCTCAA
TGATGTCAGTGACACTTAATAGGTTACTGCTAACGATTCATATAAATCCA
GAAAAGAAAGCTAAACCTTATAGCAACATAACTTATCTTTTAGAACTTTT
TGCTAAACCCACAATCTCATTTGGATCCAAATCTGCATTCAAAACTGGAG
ATAAAGTTGTTATATCATGTTCAACAATTGTTCGCAAAGAAAATACGGAA
GCTTCATACTCCATCCGAAACAAAAACAATGAAGAAATATCAGCCACTAA
AAATATCACCATTGATCCTATCAAAACTGGAAACCAAGGCGATCACTCAT
GCCGTGTCACTGCTAACGGTATCACTAAAGACTCTGGTACAAAAATACTT
TTTGGTGAGTTAATGGACATCATTTAACGTGAATCCTACCATTTGTTGAC
ACAGCATTTTTAATAGGGGGAGTCGTTGGTGCTGTGTGAGCACAAATTTT
GAGAGATTATTCTGTTTTATCAGCAAAGAGAAGACAAAATCTTTATAATA
CTGTTTCATCTTTATTTTTAAGTTAATCTGGGTCTTTCCATCCCAACATC
AGCAACAGTCAATGAAGGTTCCGCCCTCTCTATCAATTGTACATTGGGCG
GAGGGGAATCTGGTGCTAGCTTTACATGGACAGAGAATGAATCTACAATC
CCTGGACAGACTTCACAGATGTTGAGAATTGAGAATGTTAACCGTACGAT
GCATCAATCAGAATATAAATGCAATGCTGTATTGGGTGGCTTCAATGCTG
CATCGAACACAGCAAATCTCACTGTTAACTGTAAGCATAAATTTATGAGG
AACTCACTTTACGGTTTTTCCTGTTTTGCTGGAAACTTTCGTTCTATTGT
TAGAGTTGTGGTGGTGAAAGACTCGAAATATCCTCTTAATATTCTTGAAA
AATCTGCGGAAAGTAAAAAAGAGAGGCGATTTTATAGAAAATACAAATAG
ACTACTTTAGATGAAAATCCCAAAATTATGTTTCAAACCTTATAATGTTT
TGTCGAAAACTTTTAAAAACTTTTAATCTAGTGGCCTTAAGTACCATGTT
CACAATTCTTTCCCTCTCTGCGAAGTATGAAAAGACGCTTTTTCGCCTTA
GAATTTAGTAGATTTCAGCAAAATTTTGAAAAATTTCGGTAAACTTTCCG
GCTCAGAGGAAAAACTTTCCTTTGACTACTGTAAGTAAAGGCCGATCTTC
ACTTTCGCGTGACGTGAGCGAAAACTTTTTGACGTTTTTGTAAAGTCATT
GGTCGGTTTAAAAATGAAGTAATTCCATTGGTCGAAATTGACGTAACGGA
TGAAAAAAGTTAAACTTTTTGTTTGTTTGTATAACGTAATCTTTTCTTCA
GGCAAAAAAGTTTAAGAAAAAAAACTTTCGCCCATTTCGCGCGAAAGTGA
AGACCGGCCTTAACAAACTATATATAAAGAAAAGTAAAAATAGTTATAGA
TTTTTTAATCGATTTATTTTTATCTTTAAGATTTGGACAAACCAACAATC
GCTGGTAATACGAAGGTCAATGAACATGATGTTTTGTCGCTACAATGTGT
TTCAACTGGACGACCAACCATCACTACTTATAAGTGGTTCTTGAACGGTA
TGGTCATCCTGACTTTTTTTCTGCCAGGCTGCACGTTTTCTTTTATAAGA
ACAAACTATATAAGAACTTAACCCTACCTACTGAGAGGGGGGGCACAAAG
TGCCCCCCCTGTTAGAAAATTGGCTGGAATTTTTTAACTAGTGAGGCTAT
GAAGCTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATGTTTTGGTTAAAAAATTTTTTTCATTGGT
CAATTATTTTAGTCCCAATGACAGGTTTGTCGGTGACCACTACCATCCCA
CAACTGCAGCGCAGGCTATTTTGCTTTTTTTTATGTGCTTTCTCCAAGAT
ACTATAACATGTTACCAGGTATACTTTAATGGTCCATTTCATTTGTACTG
CTTCTATTACATCTTAAAGTAGAATTAGCAGCAAAAAATAAATATAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNATAATGTTCCTATCCTAAGTTATCCACGGGGGGCACATAGTGC
CCCCCCCTTTCAGTTCTAAGGGACCCAAATAGCTCTCAGTAGGTAGGGTT
AAGGCTTCGATGGTCAGAATATTAAGAACAAGTTAAGAACATTTTAAGTC
TTGGTGGACTCTAAAACTTTCAATTTCTTAGCTGAAAATGGGCAATAATA
CTCTAAAATTGGCGACAATAAGAACATGTTAAGAACATGTTTAGGCTTAA
AAAAACTCAAAAAGTTAAGAACATCCAAAGGTTTCAAAATATTGGATGGA
TGTTCTTATAAAAAAACGTGTATCAGCCATTTTTACACTGTCTCTGGCCC
CTTATTAGCGTTATATTTTCGTCACTGGTGCAATAAGGGCAATAGTGAGT
TTATGTATTCGAGATAAATCGAAGGGGACGGTATAAAACAAAGTTGACAT
GTCTCCAAAATCACCGTCGACTTTGCTCGACGGCGGTAAAAAAAACAAAT
ACCATCGTCTGTTTAGGTGAGCAAGGCGACATAGAGCCATACATCGACTA
TCGACTTTGTTTTGTATCATTTCACTTACCGTCGCCCTCGATATCCTCTG
ATACATAAACTAAATCGTAAATATTGTATCTCCATAGGTACTGAAATCGT
GGATGCAACTAGTCAAAGATATGAGAAAGCCGGCTTCGAACAATCAATGT
CTGGTGATTACTCGTGTGAGGTGTCCAACGGAGAATTGAACCAGAAATCA
GATAATGTAGCTGTCATGGCCTTGTGTACGTATAATTATTATTATAAGAA
ATATTCCAATTCTGAGTATATAATTATCGGGTACCGTGTAGTTTCCATAA
TTCAAAACTTCTTTAACTGTAATATAGACTAGAGTCAACTTTTGGCTGAA
CTTTGCTTTTTGATAATTTTTTATGACGCTGAGTTAAGTCAAGTAGACTA
GGAGAGTTTGGCAAGGTCGCCATTTTGAGAGAAAATGTTGAAAATCCAAA
TAACAATAAAACTACTTTGAATCCCTTATTCTCAAATAAATACATTGCTT
CATACTGTTTTTACCTTCCAAAAACAACTAAAATCTAGTCCGCCTAAGGA
AAAGCATATTACCATATACTACCGGGCCACTTAATCGCGCCATCGAGTCT
ATAAAGCTTTAAGTGGACCCCGGGCTAACTGTAATACTTAATCGGGGAAA
ATGGCGGAAATGAGATTTTAAATTTTTAAGAGCGTTTCGAAATTCTCCGA
CATTTAATAACCCGATAAGGTTCTTCCCAGATTTTTTTTACCCCTGGCCA
AAAATCTTTACCTGAAATATACCCCAGTCGAAAAAAAATTTTTTACGTCT
TCATTAACCGAAATTAATGCTTTATGTGTGGAATTACGAGATTTTCAGGC
CAGTGAAGGGAACCATTTCTTTTGAAAAATTCAGTCGGGTTGAAGTGACT
AAATTGTGACCAATTTCAAATTTTGCTTCAGGGAAAAGTGACAATTTTTT
TCCCGTCGAAGTTTTTCCACGACTAGCTAAGGCCAAGGCCCTTTTAGGTA
ACAAACCCTTAACAAACAAGTCTCATAAGCTAAAATTCGCTTTGCCGTAA
TGAGGCTGCACTACTACAAAATTACTTTAAACCATGAAATGTCACTCCGT
AACACCTCAATTAAGAAAAGATTGTTACTTTTTTCTAGCAAGGGGTAAAA
AAGAAACAGGGTGGCACTCCTCGGTCCATTATCTCATATTATGTCATTGG
CACTTAGATGATACAAAATATGATTTACTTCATTTACACGACTTAAAAAA
AAGAGATCTCGTATTTTATCTTCCATAATATTTCCACTTTAGTGGAACCA
ATTACCTAAGAAGTTGAAATTACATGACATTCAAACTCTAGCCAATTTTA
AAACAGAGATAAAACGTTGGAAAGGCTCTAAATGCTCGTGTAACATCTGT
ATGTAATTAGCCCTAAGTCGTCGTTTTTACTTATTATTTTGATATTGTTG
GACTTTATTAGTTATAAATTTACTTGATTTGTAATTACGTTACCCCAACA
TTAAAGAAAGACATTATTATATATTATTATTATTTTACAGATCTCGGTAC
TCCAACCATTACAGTCAACCCGACAGACGGTATCCCCGTTAAAGAGAACA
ACAACCTCACTCTAACATGTAACATCGCCAGTGCAACATCCCTCAACAGA
TCTTCTCTTAATTACAACTGGACTAAAGGTGGTGAATCCCTTTCTACGAA
TCAAGTATTGGAATTAGTGAATATCAAGAAACAAGATGCTGGCAATTATA
CTTGTACTGTCACCAGTGATGCTACCTCACTGTCAGCAATGGCAAACGTA
AATGTTATAGTGCATTGTAAGTTCGACAGACGATTTCATTAAATTTCGTT
TGGATTAATTTTCGCGATTTTTGCAAATGTTTGCCTTTTTCGCGAAAATT
TGTTCTCGCGAAATATTTAGAATCCAAATTTTGGTCAAAACCCCTAGGAA
AATGAACGAAATTGTGTAAAAAAGAGGCCGATTCGCGAAATTTTGCCTAC
GTGAAAATTATTCCACTTATGGTTGAAAAATCAAAATATTAAAGACATGA
CACTTCAAGAGGCCGATTCGCGAAATTTTGCCTACGTGAAAATTATTCCA
CTTAGAGTAAAACCTAAATCAAAATATTAAAGACACGAAACTTCAAGAGG
CCGATTCGCGAAATTTTGTCTACTTGAAAATTATTCCACTTAGGGTAGAA
ATCAAAATCAAAATATTGAAGACAGGAAACTTCATATTGAAGGACTTATA
AGAACACGGATTGGCTGGAATATGCCAGAACACCAAGTTACCTTTTATCG
GCCAAAACTTAGTCGGCCTTAATTTTAGTCGGCCTTAATTTTAGTCGGCC
TTAATTGTTAGTCAGCCCTAATTTTAGTCACCAAGCCAAAATTTAGTCAC
TTAGGGCCGACTAAGTTTTGGCCGATAAGGTATATAAATTACATAAAATA
GAATGTTCCAAAAGTTAAATTCAATAATTCTTTGAAACTTTTTTTGATTT
TCGAAACGAAATTCTCATAAATTGAATACTAGATTTGATAATAAAAGACT
TTTAATGTTGTTTCGATTTGTTCCATAGTTGCCCCTCATGGTATTTCAAT
CTCTGAAGAAGGCCGCCAAGTGTTACTCAAAGGAAGTTTGTTCAACGCCA
GGTGTTCTGTAGACAGTCTTGGATTGCCAATTGGTGAATTGAAATGGTTT
AAAAAAAAAAAATCCATTGTAAAAACTGAGGAATCTAGAGACCTTTACCT
TAGTTTTGTCGGCGATGGGGTACAGNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033441XLOC_033441Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052954-exon-scaffold_222-1575043694:169956..170146TCONS_00052954-exon-scaffold_222-1575043694:169956..170146Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:161591..161731TCONS_00052954-exon-scaffold_222-1575043694:161591..161731Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:160285..160410TCONS_00052954-exon-scaffold_222-1575043694:160285..160410Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:159643..159903TCONS_00052954-exon-scaffold_222-1575043694:159643..159903Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:159217..159474TCONS_00052954-exon-scaffold_222-1575043694:159217..159474Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:158400..158516TCONS_00052954-exon-scaffold_222-1575043694:158400..158516Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:156372..156509TCONS_00052954-exon-scaffold_222-1575043694:156372..156509Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:154781..155056TCONS_00052954-exon-scaffold_222-1575043694:154781..155056Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1575043694:153820..154018TCONS_00052954-exon-scaffold_222-1575043694:153820..154018Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:169956..170146TCONS_00052954-exon-scaffold_222-1510915933:169956..170146Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:161591..161731TCONS_00052954-exon-scaffold_222-1510915933:161591..161731Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:160285..160410TCONS_00052954-exon-scaffold_222-1510915933:160285..160410Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:159643..159903TCONS_00052954-exon-scaffold_222-1510915933:159643..159903Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:159217..159474TCONS_00052954-exon-scaffold_222-1510915933:159217..159474Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:158400..158516TCONS_00052954-exon-scaffold_222-1510915933:158400..158516Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:156372..156509TCONS_00052954-exon-scaffold_222-1510915933:156372..156509Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:154781..155056TCONS_00052954-exon-scaffold_222-1510915933:154781..155056Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1510915933:153820..154018TCONS_00052954-exon-scaffold_222-1510915933:153820..154018Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:169956..170146TCONS_00052954-exon-scaffold_222-1491911889:169956..170146Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:161591..161731TCONS_00052954-exon-scaffold_222-1491911889:161591..161731Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:160285..160410TCONS_00052954-exon-scaffold_222-1491911889:160285..160410Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:159643..159903TCONS_00052954-exon-scaffold_222-1491911889:159643..159903Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:159217..159474TCONS_00052954-exon-scaffold_222-1491911889:159217..159474Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:158400..158516TCONS_00052954-exon-scaffold_222-1491911889:158400..158516Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:156372..156509TCONS_00052954-exon-scaffold_222-1491911889:156372..156509Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:154781..155056TCONS_00052954-exon-scaffold_222-1491911889:154781..155056Clytia hemisphaericaexon
TCONS_00052954-exon-scaffold_222-1491911889:153820..154018TCONS_00052954-exon-scaffold_222-1491911889:153820..154018Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:153820..170146 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.6562	7.77736	9.84309	7.07991	9.20364	5.78547	15.544	15.0434	14.5955	17.6983	8.26391	14.7168	26.4982	20.0108	10.2081	11.3721	8.44323	10.1357	43.7735	71.6258	4.3625	6.08963	3.9814	3.50499	2.39031	5.30371	4.39505	13.9776	0.525018	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052954 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top