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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052934 ID=TCONS_00052934|Name=TCONS_00052934|organism=Clytia hemisphaerica|type=transcript|length=810bp
GAACCTGACGGTTCGGCTGATGGTTTTACTTGCACTTGCGAAGTCGGATA
TTTTGGTGTTCATTGCACAGCATCAGCCTGTACCAGTCACCCATGTAAAT
ACGGAGGAAGTTGTCAACCAGATGGATCGGATGATGGATACACTTGTTCA
TGTCTTACGGGATTCTTTGGAAACCAATGTGAATTGAGATCTTGTGTCGG
AAGTAACCCCTGTCAAAATGGTGGATTATGTTTCCAACAAGGAATATCGC
AAGCTTGTATCTGCAACAATGGATTCACCGGCTCCAACTGTCAGGTTCAA
CCACCCCAGCCTGGTGTTTAAGAATTTTTTGTTATCACCACATAAATCGC
ACCATCAACTCCTGCCCCACCGACCAATCTACCAACAGACCCACCAGCCA
ACCCACAAACTAATCCACCGACAAACCCACCAACAAATACACCAGCAAAC
CCAGCAACTAACCCACCAACAAACCCACCGACCAACCCACCAACTAACTC
ACCAACTAACCCACCGACCAACCCAATAACTAATCCACCGACTAACCCAT
TGACAAATCCACCGACCAACCCACCGACCAACCCACCAACTAACCCACCG
ACCAACTCACCAACTAATCCACCGATAGACCCACcaacaaataattttta
accCATTTATTGTATTAACCAATttattttttaagcctttttcatttcaa
aactcattattttgtgacatttttatcTAACATTTTAATCCATGTATCAT
TAAAGTAATTATACAAACAAAGACAGCAAAGCGAAACAAGATTTCGCACA
ATAATATCAC Run BLAST on NCBI transcript from alignment at scaffold_222:48820..71288- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052934 ID=TCONS_00052934|Name=TCONS_00052934|organism=Clytia hemisphaerica|type=transcript|length=22469bp|location=Sequence derived from alignment at scaffold_222:48820..71288- (Clytia hemisphaerica)
GAACCTGACGGTTCGGCTGATGGTTTTACTTGCACTTGCGAAGTCGGATA
TTTTGGTGTTCATTGCACAGTAAGTAATTTTATTTTCCCAATCTGACACA
AGTAACTTTTGTAACGTTTTGNTGTTAGTAATTTTATTTTCCCAATCTGA
CGCACAAGTAGTTTTTTTAACATTTTGTCCGTAAACTCGGACGATTTTTA
CGAAACTTTCTTTTTTCATATCTGTTGAGTTTCTAACGTGGACAATTGTT
ATTATGCTTTCGTGAACAATTTGAATGCAAGATTTATCAACAAATTTATA
TATTGCTAAAAGTTTTTCATTTCTTTTCCTTTCTTTCCTAGGCATCAGCC
TGTACCAGTCACCCATGTAAATATGGAGGAAGTTGTCAACCAGATGGATC
GGATGATGGATACACTTGTTCATGTCTTACTGGATTCTTTGGAAACCAAT
GTGAAGTGAGTTGAATCTTTTATCTCAAAGCTTTCTTTCTCAAACATTCT
TATCCTATTTGATAGTATGACCAATGTCAAGTGAGTTACTTTGAAAATAC
TTACAACTGTGATATGAACGTATATTGCCAAAACTGTGAAGAAATCCCTT
TCTAATGTCTACACCTTTTCTATCTTAGTTGAGATCTTGTGTCGGAAGTA
ACCCCTGTCAAAATGGTGGATTATGTTTTCAACAAGGAATATCGCAAGCT
TGTATCTGCAACAATGGATTCACCGGCTCCAATTGTGAGGTAAGGAGTTG
AATCTATGAAAATAATTTAGTGGGGAGCTATAATTATAGCACTTGGAAAA
ATTAAAACCATCGTTTAGAGTTAACTAATTTTGGTTCAACTCTTTTTTTA
TTTAATTAGGTTCAACCGACCCAACCTGCAGTTTAAGACTTTTTTGTTAT
CATCACATAGATCGCACCATTAACTCCTGCCCCACAGACCAACCCACCGA
CTAATCCGCCAACTAACCCACCAACTAACCCACCAACCAACCCACCAACC
AACTCACCAACAAACCCACCAACTAATCCACCAACCAACCTACCGACTAA
CCCACCAACTAACCCACCAACCAACCCACCGACTAATCCACCAACCAACC
CACCAACCAACCCACCAACCAACCCACCGACTAACCCACCAACAAATGCA
CCAACTAATGCACCAACAAATCCACCAACTAATCCACCAACTAACCCATT
GACAAACCCACCAACAAACCCACCAACAAATCCACCAACCAACCCACCAA
CTAATTCACCAACTAATCCACCAACCAACCCACCAACAAACTCACCAACA
AATCCACCAACTAACCCACCAGCCAACCCACCAACAAACTCACCAACAAA
TCCACCGACTAACCCACCGACTAACCCACAAACCAATCCACCAACAAACC
CACCAACAAATCCACCAACTAATCCACCAACAAATCCACCAACCAACCCA
CCAACCAACCCACCAACAAACTCACCAACAAATCCACCAACTAACCCACC
GACTAACCCACAAACCAATCCACCAACAAACCCACCAACAAACCCACCAA
CTAATCCACCAACAAACCCACCAACCAACCCACCAACAAACTCACCAACA
AATCCACCAACTAACCCACCGACTAACCCACAAACCAATCCACCAACAAA
CCCACCAACAAATCCACCAACTAATCCACCAACAAATCCACCAACAAATC
CACCAACAAATCCACCAACTAATTCACCAACAAATCAACCAACCAACCCA
CCAACAAACCCACCAACTAACCCACCAACAAATCCACCAACTAATCCACC
AACAAATCCACCAACTAATCCACCAACAAATCCACCAACCAACCCACCAA
CTAACCCACCAACTAACCCACCGACTAACCCACCAACCAACCCACAAACC
AATCCACTAACTAACCCACCGACAACTTCATTTGATCCAATGACATTTTG
CAATGGAAGAATTGGTTACTTTGCTCACCCAAACCGTAACCTTTTCATTC
GCTGTACTCAACTTGGAACCTTTGTACAAACATGTGGAAATTTGGTTTGG
CTTCAAATCGCAGAGGGTTACGGTACCTGCGTACGATCTTCAGCATCGTT
CCCTTCGATTGTCACAACTACTGCCACCCCAACCAATCCACCGACAACAA
CTTCCGCCCCAACTAACCCACCTACTGCAACTACAACCCCAACCAACCCA
CCGACCACAACTGTACCTCTAACCAATCCAACGACAACAACTGCCGCTCC
AACCAACCCACCCACTACAACTGCCGCCCCAACTAACACACCGACAACTA
CTGCCGCCCCTACCAACCCACCAACAACTACTTCCATCCCAACCAACCCA
CCAACAACTACTTCCACCCCAATAAACCCACCAACAACGCCCTTCAGTCC
ATCAGCATTTTGCGTCGGAAAAATCGGTTACTTTGCTCACCCAAACCGTA
ACCTTTTCATTCGCTGTACTCAACTTGGAACCTTTGTACAAACATGTGGA
AATTTGGTTTGGCTTCAAATCGCAGAGGGTTACGGTACCTGCGTAAGATC
TTCAGCATCGTTCCCTTCGATTGTCACAACTGTCGCTTCAACCAACCCAC
CGACAACAACTGCCACTTCAACCAACCCACCGACAACAACTGCCGCCCCA
ACTAACCCACCAACTACAACTTCCGCCTCAACTAACCCACTAACAACTAC
TTCTACCCTAACAAACCCACCAACAACGCCCTTCAGTCCATCAGCATTCT
GCGTCGGAAAAATCGGTTACTTCGCTCATCCAGATCGTCATCTTTNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCATTCAAAATAACCCTCAA
ACCGAACAAAATTACCCCCAAACAGAGCAAATTTACCTCCCGGACAAGGA
AAATTTTGTAGATTTTTCATTACCACCTGGATACTATATCCTCCACCCCC
ATGTACGGACATTTTCTGGAAAAGCCCCTTAAACCGTCAGCAATATAAGA
ATCAAACCAATACCTCAACTACACCCACGCTTTCTGTAGCGACTTTTGAA
GCATCAACATAACGAAATAGCCGACCCATCACAACCTAAACGAAACGATA
TTTGCTCTCGTAACAAACACAAGAACTTAATGGGCTGTTTCAAAAAAATT
CCATACAAAAGGACGAACCTTTTCAAGTCAAAACAAATTTCTTGGAAATG
TGTTGACATCCTCTGGAAAATAGCAAAATTTGCAAAAAAAGACACTGAAA
TTTATTTTCATGTCGTAAAATGATAGACATGTAATGTTTGACAGCCTTCT
TCAAATTGACATATGCTTGCTACCATTAAACGCAAGAATACTTTCTAAAA
TACTTCTCTTTGGTGATTCGAATTTTAGTAACAGCCTAAATCATAATATA
TTAAGTATAACCGTAAACTTTATCCAAGATACCAGTCCATTAGGGTCCGT
TGTTTTGATTGTTCACAATGCTCATTTGATTTGTTTTTTGTTTAATTTTG
CCTTACCTTTCTATTGTTTTTTCCTTTCTCGTTTTTCATTTTATAAGGTT
CCTCTCTCCTGGCGGTATAATCTAGCAGTCGTTTACCCCCTGGAAGTTTA
AGAATAGATTTTTACCCCCTGGAAAAATCATGTGTAGCTTTCAGTGGCAT
CTACCCACAGAAATCTTGTATAAAGCACTACAGATAGAGCTACTCTGTCT
TTCTCAAGCAACAGTAGTTGAAGCAAAATATCTTTACTGAGTAGACTACA
GTACTCGGCGCCGGCAAATTGTTATCAAAACAACTGACATGGTCGGAACT
GAGGAGTCATGATTCATCAAATTACCGGGACCAAATAGTTGTCTGATTAT
GAAAGATTGTTTTACTACAGCCAGTGATAAAGTAGCTCTATCTAGTGTTT
TATATCTAGGTAGTGTTTTATATAGATATCTGTAGGTATCTGTGAATTTA
TTGAGGATTTGGCCTCGGGTAGGCTTATTGAACCTCTTTTGCGAGGAGAA
TGGGTTAGCGAGTTTAGATCTGAAATTGTATAATCTAACAGCTCGTGACA
GAATATATCAACTTTAGAATTGCAATGCTTCACCAAAAGGGAAATATAAT
ATAATCTCACAGTCCCGGTAGGAAGTTTTTAACCATGTTGAGGTTAAAAA
CAACGGACTGAAACTCGGCTGGGGAATTTGAATTCCATTTGCTTTAAGTC
AAAAAAATTCAGTGGGGATTAAAAAATAGCATAATATTTTTCAGTGAGGA
TTTGTTAACATTTGAGCATTTTCAGCGGGGACAAAAATTGGAGCACAATT
TTCCATTTGGGAGGTCAATTTTATATGTGAGAATTCAGGGTAAAAATGAT
TTTTCGTTTATTTCTGAGCCATTTTGCTTGTAAAGAATGGCTGATCACTA
GTGCACGAAAAAAAATTATCCACTACTTGGGTAGGAGCTTGAGCTCAATC
TCTAGCTGAAACATACTTTAAAAAACTTCAAAAATTGAACTTTCGAAAAA
ATAGTAACTAAACGAATGAATGAATGTGCTTTTGTGTTGCAGGCGACTAT
TCGGTTTGGTAGATTTTATCAGTGTAGCTGAACGAGAGAGACATATAAAA
TTATTATGTTTTATCAGATACTCGCTACCAGCTGATCACACCCAACTGTT
GGTCACAAACTTACTTCTTTTTGCGTTCCAGAGCCATTCTTAGACTCATA
GCACTCGGTTATCCAAAATTGTTATCTTTTGAAACATTCCTGAAATACAA
ATCAAATGAGAGGCTATTATAAGGATAAAATCTTGCTGCGATTTGCAAAA
AAGTTTTATCTCTGATACATTGATAATGTCCGAATTCTGACGATGGGATT
AGGCACAATCAAGAAAAATATCCCTAAGGCGGAGTGCATAGTAAGGTAAA
TGAGAGCATAAAAAAGAAATAAACACACTCCAGTGTGGTGCTTCAAAATC
AGATTAGCTCTATCAAGATAATGATTACCTAAATTAAAGCCATCATAGAA
AAACTTATACCATGAAACAAGCTAAACATTAAAGTATAATTAGAGAAACT
CTACCAAAAATTACAGCTTAAGTGTGGTTTCAATTTTTTTAAGAACAAAG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCA
TGTATCATTAAAGTAATTATACAAACAAAGACAGCAAAGTGAAACAAGAT
TTCGCATAATGATATCACTGAAACAATTATAATTTTTTAGGCTCCTTCAA
GGTTTTTAAACTATCGAACTTATAATGAACAAAGAGATTTAGCCTCAAGG
AGGGCTAAAATAACTACTACAATATCACTAAGTCAGAAATAACCTAAAAT
CAGATTGTGATTGTTTTCTGCACACCACGCTGAAGCTCTAAAGGGCTGTG
TTAAGACAAAAGATCTGACGAATTAGCTATCTCGCTTACGTAACAATAAA
AAGACTGGGAATGAGAACAAAATGTTTCGATTGTGTTTGAATAGGGTGCC
GTATTAAGTGAAATTCAATTTCTCTCATCTCGACAAATAAGAGGATTCTT
GTTATAAAATTGACCATTTTCCTCAAATCGTCAATTTTCAAGCACTTTCA
GATGTTTATTGATTATAGCACTTTCAGATGTTTATTGATTATGATTGGTT
TATTGAAATTGTGACCATCTATCATTGGTCTTTACAGGGTTTTTTAACAA
CCAACTTGAATGGTCAAAATTAACTTTAAATTTTCAACAGTAGATAACAT
TAACTTGAGATCTTTGAAAAGAACTCATTGATATTAACACATCGAGAAAG
CGAGGATACTTCGAATAAAGGCGTTTATAAACTTTTTTGGATTTTAAGAG
GGACGTTTATTCGAGGGGTTGTCAATGAAATATTTTTTAACCAAGGTCAC
TTTAATAAAGTGAATCGGATCCTTATGCTTTCTCTTTTCCTTTTCTTTCA
GTTCAAATATTTCATTTTTAGAAATGTAAAAATGGGTCAAAATTATTTTG
AATACTGAAAGAATACAATTATTACCCCATAATAATTTTTTTAATAAATT
TTCATCGGATGATTCCCTCTTACAGCTACTAGTTTCAAATAAACACCTCT
CCTAGTGGGAAAGCGTTTTTTTTAATTTTTCCTCTAAGCAGGGGCGTTTA
TTCGAGAGAGCGTTTAAAGGAAGGGGGCCATGAACCATATATTTTCAAAA
TATTTCCAGGATTGGAAATCTCTTATTTCACCCATTTCAGTGCCATCTGC
CTGAGACAGTGTGCGAATTTTCAGTTCGGCGACGTTGGTATTTTACAGAC
CGGTCTTTATTTTATTCAAAATACTCAGCTCCAGCATAACCATAAATTTT
GCTGCAATCTTAATGCTGATAATTTTGTAAAGTATTTTATTGTTAAAATT
TCAAATCAATGATAATTTCCAATATTATACAGAAATATGAGAACCTAGGG
CTGACTTAGCAAGTGGGGGAGAAAGTTTAGACATAAATAATAAGCAGGGA
CCACAAAAGATAAAAAAAAAGACCTTGGGCTTTTCCGGAAAAAAAAANNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNTTAAAAAATAGCATAATATTTTGCAGTGAGG
ATTTGTTAACATTTGAGCATTTTCAGCGGGGACAAAAATTGGAGCACAAT
TTTCCATTTGGGAGGTCAATTTTATATGTGATAATTCAGGGTAAAAATTA
TTTTTTGTTTATTTCTGAGCCATTTTGCTTGTAAAGAATGGCTAATTACT
AGTGCACGAAAAAAAATTATCCACTACTTGGGTAGGAGCTTGAGCTCAAT
CTCTAGCTGAAACATACTTTAAAAAACTTCAAAAATTGAACCTTCGAAAA
AATAGTAACTAAACGAATGAATGTGCTTTTGTGTTGCAGACGACTATTCG
GTTTGGTAGATTTTATCAGTGAGACATCTTTGAACAAGAGAGACATATAA
AATTATTATGCTTTATCAGATACTCGCTACCAGCTGATCACACACAACTG
TTGGTCACAAACTTACTTCTTTTTGCGTTCCAGAGCCATTCTTAGACTAA
TAGCACTCGGTTATCCAAAATTGTTATCTTTTGAAACATTCCTGAAATAC
AAATCAAATGAGAGGCTATTATAAGGATAAAATCTGGCTGCGATTTGCAA
AAAAGTTTTATCTCTGATACATTGGTAATGTCCGAATTCTGACGATGGGA
TTAGGCACAATCAAAAAAAATATTCCTACGGCGGAGTGCATAGTAAGGTA
AATGAGAGCATAAAAAAGAAATAAACACACTCCAGTGTGGTGCTTCAAAA
TCAGATTAGCTCTATCAAGATAAAGATTACCTAAATCAAAGCCATCATAG
AAAAACTTATAACATGAAACAAGCTAAACATTAAAGTATAATTAGAGAAA
CTCTACCAAAAATTACAGCTTAAGTGTGGTTTCAATTTTTTTAAGAACAA
AGTCAGAAATCAGAAATCATTTAATTGGTAGAAAATCTTAAAAAATCTTT
TCATTTTTCAGAGTTTAGCAGAAAATTGTTCGCCAACCAACCCTTGTTCA
AACGGAGGAACTTGTATTGATGCTTATCCAACTGGTTTCGAATGTTCCTG
TCCTACTGGCTTCTCTGGTAACCTGTGTGGAGTAAGTCGATATAATTTCT
ATTTCTAATAATCAAGNTAGTCTTCAAATTCATGCAATGACAAATACTTG
ATTTTCCAATTTCTTGAGACTGAAAGTTAAAGAAGTTAAGGAAAATCTAT
CTATGTAGCAAATCTAAAATATTCTTATGGAAAAACCATGAAATTTGTAT
AAATACAGGAAGATGTTGTCCCAAAAATCATTCATCAGCTACAAACAGTT
TGAGTCGCTTACAAGACCTTTTACTAAAGGTGCAGCTAAGTGAAGTCACT
GTAAAAAGCAAAGAAGATTTTTTGGGCCAGCAAATTTGCAGATATCTTGA
ACCAAAACATCGAACTGTAAAGGTTTTCAATCAACAAGAAGAATCATGAA
GAGCTTTTTCATTTTGTTGAACCTTGTTGCTTCTATCCAAATGGTAAGCT
ACAATAATTTTTACCTTAAATATTTCGTAAAATCTAAATTAGATTCTTTT
TTAACTTTTAAGTTATAATGTATCAAATGAACATCCCTCCTAGATGTGAG
GCGCTTATTTGAAAGTTGCGTTTATACGAAGGGTGGGGAGGGAGCTTTCA
TTTGAAGGAAAATATTTAATTAGTGATACCCTTTCTCAGTTTCTTGAAAA
ATCACCTAACACGACTTTCTTTTCATTTTTCAGAGTTTAGCAGAAAATTG
TTCGCCAACCAACCCTTGTTCAAACGGAGGAACTTGTATTGATGCTTATC
CAACTGGTTTCGAATGTTCCTGTCCTACTGGCTTCTCTGGTAACCTGTGT
GGAGTAAGTCGATATAATTTCTATTTCTAATAATCAAGCCGAATAACAAC
ACTCTAATGTTTGTTCGCACGCGATTGACTATTACCGAGTTTACGCATGT
GTATTTTTCTCCAAGGGAGACGGTAAGGCTCTAGACTAGATCCTGACCAG
CTGAGGACGACCATAAATCAGCACTTTTAATGCCCTCGATTTTGCAGGTC
AGAAGTGCGGGTTATTTCAAATTGCTTCAGTCACCCTACCGTCCTCAAAA
GAGCAAATACATAACCTCGCTATTGATTAACCATAATGATCGTTACAAGG
CACCGTTTCTACAAACCGTTTTCTATAAACTCGGGCACTGACAAGCTTAT
GAAAGGCCACAACACTGGGTTAAAAAAAATCGTGTAAAACTTTTTTGCTT
GTCCAAATTTCACAATTCCTTCATATTTCTCTCGTTGTGTTTCAGATGGT
GAACGTATGCGACACATACGGATTACTCTGTCAAAACGGAGGTACATGTA
TAGCTGATGGAACTGTCGATGGTTTCTCTTGCACATGTGCAGCTGGATAT
TCTGGTGCTTACTGTACTGTAAGTTTAATTTTAATTTCCTATAATAAAAA
TGCGAATATTTTGATATATGTGATTCAACAGTAAGCGTTAAAAACACCAT
ATCAAAAATTGGTTCCACTATTATTTGCCATACCTACGAACTTCCCCTCA
GAACCTCTTGTAAATGGTTTTGTTTTAAGGTCAAAAGTTTCAATGTGAGT
GAAAATTATGAATTATCTTTTTCTCTCTCTCAGCAATCAGCATGTGGTGC
TAACAGTTGTCAAAATGGAGGAACTTGTATTCCTGGTGCCAATGGTGATT
ATACCTGTCAATGTCCCCCTGGAACTTCTGGTGCTCTTTGTCAGGTAGGT
TGTCTGGAAAGATTCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC
CCCCCCCCCCCCCAATAATTCTTTCAAAAATGGTTATTTTGCAAAATGCA
AAGCTTTTCTTTTTTAATTTGTCATGATTGTCACAATTGAGTGCATTTTC
AAGCAATCTAGAGCTCAAATTTTCAAAATTTTCCTCCTCGGGCCAAACCA
TGGTTGGCCCGAGCGGTGTCACTAAACTTCAGCCCCCTCAATATGAAAAT
GCTTCCTACGGCACTGTACTATTCTTACTTTCACATAGTTTCAGAAATTT
TTCCTTTATCAGATAGACTCAAAATTATCTTGGATATTATCTGACGATGT
TACGTACTTCTTATCTTCTAGAACTCAGTTTGCGGAGCAAATCCATGCCA
GAATGGAGGATCTTGTACACCGACAGCCGATGGCCCACAATGCACCTGTA
GCACTGAATGGTCTGGTCTAACTTGTGAGGTATGTTATTTTCAGCTCTCT
TCAAAAAATTATAACGTTTGATAATACAACTTTATAAAATGATTAAGTAC
TAAAAAATTCAATCAGTGGTCCAATAAAGGTTCTCTACCTTTTAATTGAA
TTACCTTAAGGGTATTAATTTTCGCGGGGATTATATTTCGCGAATTTCGC
GAGTTTTTCCGAAATTCGCGAAATATAATCCCCGCGAAAATTTTAAAAAC
CTGTGGATTCGCGAAATTCGCAACGTATAATCCTCGCGAAAAATTTAAAA
TCATGATTTTTGCCTGAACCCCTAGGAAAATGAAAGAAATTCGGTTAAAA
AGGGGCTGATTCGCGAAATTTTATCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGAATTCCCGTCTTCGCGAAAATAAG
TCCCGCGAAAATTAAATTATTTCGCGAAAAAATTGTCTCGCGAAAATAAG
TTACCGCGAAAATTAGTACCCTTAAGGTAATAGACATTTAAGACAAGCTG
ATGCAAAACAGATGCAAACAATAGCTGGTAGTTATTACAAAAGACCTTAA
TAAAACATTTTGAAAAAATCATTTCAGATTAACTTGGCTTGCAACATAAA
TCCGTGTCAAAGCGGAGGAACTTGTTCACCTTCGAGTCTGGTTGAAGATG
GTTATACTTGCACATGTGCTGATGGATTTTCTGGTCAAACTTGTACTGTG
AGTGGTTTCGATTTTCGAATGATTTTTTCTTAAAAACAATCTTTTTGACC
ACTTACAAAAACAAATTCTACCAATTTTGCTTCTCTAGAACTTGGAACTG
TCTAAAAGAATCTTTGCTGAAATTCATTCACCAAATGGATATAGGGGTAT
CAATGTACCTCAAGAAATATTATATGCACCACAATTGACTGTGTTCAAGT
TCCAAGCATTTCAGGCAGGGTGTTAGGCGAAAGACTCTGGTCATAACTTC
ATTCTCGCTAATGTTAGAATTGTTATGACTGTATTATCGATTCTTTTCTT
TCAAGGAATCAAGCTGTAGCGGGAACCCTTGTGCCACAGGAAGTACATGT
GTCCCTGATGCTTCAGCCAATGGCTTTTCTTGCACATGTGCTGCTGGCCA
ATCAAATCCTCTCTGTAACGTAAGTTTGTCTCTTACATTCAAATGAAGAT
ATCAACGCCCCAAGCGAAGCTTAAAAAATATTAAATATCAGCTTTCAAAG
CAAACATGAGAGGCTTTCATAAAAGTAAACCGTATTTGCAAATCTTAGCG
AGTCAATCTCTATTATCAAGGTTTTGTATATTAGAATCTTTCTTTCTTAA
AGTTCTCGATTGTCCATACAGAAATAATAAGGTTATGTACGAAAACTTTT
CACTTCAGGTCGCCGATGGTTGTGGAACAGTCAGCGGAGAAAACCCATGT
TTAAACGGAGGAGATTGTTCTCTTTCAAATACTCTCTACGCTGGTTATTC
TTGCCAATGTAATGGAGGATTCTCAGGACCAATGTGTAAAGTAAGTTTTT
TTTACAAACATCTATTAACTAAGTTTGAATAAACAAGGCGAATACTTTTT
ACACCGCAGTTTTCTTTCCATTGCAAAGAAGGATTCTTAGGATCAATTTG
TTCAAAAAAATTTTCAAAATAAACCTCTGTATTGCAAGTTTGGATGAACA
AGCTAAACAAACTTAACACTGATTATTTTTTTTATAATAAAGCATATTGT
CCTGATTGGTTGTATCACGAATTTAAAGCCATCATATAGAGATATTCTTT
CTATTATAGATCAGTGCTTGCTCAAAAAACCCATGTCAAAACGGTGGTAG
TTGTACGGCAAAACCATCCAGTCCTGGATTCGAATGTGCTTGTGTTGCTC
CCTATACTGGTGCCATCTGTCAGGTTAGTTCATGTTTAAGTATCATATTA
TCAATGCCACAGTGTGTACCTCAAAGATTGAACTTAATATTTTGCTAAAA
TAATGGAATCGTTAGTCCGACCTTTTATTTTTTGGAGAATTTTTTTGAAG
TTTTGAATTTATATGTGATAGTAAAGAGACACCATTGAATAAATTTTTTG
GTGCCAAACCAAAACCTATTCATGATATTCATGACGTAATAATTACCGAA
ACAATCCGCTTTTTGCCAGTAGTGGAAATTTAAGCTAGTAAAAAAATTAT
TTAAAACTTGCCATTACTGGCAAAAACCTGGGGTGTTTTGTTACGCTGAA
AACATTATGTAATAAATATCATGAATGAAAAACTTCAATTTTCCCAGGAA
TCGATCTGTTCTTTACAACAACCTTGCAAAAACGGAGGATCATGCGCAGT
AGCGCCAGGAACACCTGGTTACCAATGCACATGTGCAAACAATGGATACA
CTGGACCCACTTGTGAAGCTTCGGCCTGCGACGTCAACCCCTGTGCTAAT
GGAGCCCAATGTAACCCATCTGCTGCATCCCCAGGATATACTTGCACATG
TCCAGTTGGATTTTCAGGACCAACTTGTAGTGTAAGTATCATTAGAGTTA
TAACAGATTTCTGTCAACTAAACACTACTAAGAATTATAAAGTTTTAAGC
ATATTACATACCATGAAAAATCGCAGAACCTTTGAACGATAAAATTTCAA
ACTCGGAATTATAAAAGTTATAAACATAACCTCACAAAACTTTTGAACTA
ATTCTATTCTTTCTCGCAACTTTTCAGGCTTCAGCATGTGATGCCAACCC
ATGTAAAAACGGCGCAACATGTACCCCAGATGGCACCGCCCTTGGTTATT
CTTGCGCATGCGTAGGAGGATATTCTGGATCAACTTGTACTGTAAGTAAT
TTCACTTGCCTCGCTCAGTCAGTTCTTATTGATAGTGNCCAACTTGCACT
GTAAGTAATTTCACTTGCCTCGCTCAGTCAGTTTTTATTGATAGTGTTTT
GAACGCGTATCTAGAACTAACTGATATTATATTGTTACAGTTGAGTCTTT
TTAACTTGAAGTACAAATTTGTCCGAATTTGTCCGATAATTTGAGATATA
GAGTAAAGTTTATAAAGCATTGTTCACTAAAGGGACAGTAGCATAAAACT
TGCTATAAGAAGGCATTCCAGTTATAGAGGTTCAAATTAATAACACTGTA
TAAAGAATTCACACATTTTCACTAAAAGCAAATTTTTGTATTCAAATGAT
TTTACTATTATGATTCAAAGAGATAAAATATTTACTAGAACTAAATTTAC
AGTATACCGAAAACTATTCCACTTTCTTTCCAGGCTTCTGCTTGCGATGC
TTTGCCATGTTTGAATGGAGGAACTTGTATTGTTGATTCAAGTAATGATG
GATTCACGTGTAATTGCCAACCTGGATATTCTGGTGCCACCTGCAGTGTA
AGTTGCCTCGATTACTCAATCATCAAAAACAGTGTTCCATTATGCTAATG
TTGAAACAACACCCTAACACTGCACATTATTGATTGATAACCCTATCTGA
AATCGCCTTTTTTCTGTCGACTCGATAACCCAGTCAGAAAAAATAGTATT
TTAAGTTAAAACTTTACTTATAAAGCCTTCACTTCTGACTCGATAAAGGA
ACTAAAAAATACAATGTTTTGAACTGAAAGTTTTTTCTGTCCACAGCAAT
CAGCCTGCGGACCAAACCCATGTCAAAATGGTGGAAGTTGTCAACCTGAT
AATTCTGCTGACGGTTATACTTGCACATGTGAAGAAGGATATTTCGGTGT
CAATTGTATGGTAAGTGTCAAAACACCAATACGTATTTTTTGAAAAGTTT
CGTGAGATTGTCATTGAAATTGACCATCTTCTGAATTGCATTCTATTGGA
TTTGCTCTCCGTAAAAAATATCGTTTCAGGGGTAATTTATTCTTCCTTTT
GTATGTAATTTTATCCGTTTTAATGAAAATCCTATTAACTTAACTTAGAA
CTTAACTTTTCGTGTTCTTCTCATCCAGGCCTCAAATTGTGATATGCAAC
CATGTCAAAATGGTGGAAGTTGCAAAGCTGACGGTTCGGCTGATGGTTTT
ACTTGCACTTGCAAAGTCGGATATTTTGGTGTTCATTGCACAGTAAGTAA
TTTTATTTTCCCAATCTGAAACAAGAAACTTTTGTAACGTTTTGTCCGTA
AACTTGGATGATTTTTACCAAAATTTTATTTCTATATCTGTCGTGTTTCT
GACGTGGATAACTGTTTATCTTTGTCCTATTTGAATGCAAGATTTATCAA
CAACTTTGTATATCAGCTCGCTAAAAGTCTTTTCTTTTCCTTCTTAGGCA
TCAGCCTGTACCAGTCACCCATGTAAATACGGAGGAAGTTGTCAACCAGA
TGGATCGGATGATGGATACACTTGTTCATGTCTTACGGGATTCTTTGGAA
ACCAATGTGAAGTGAGTTGAATCTTTTATCTCAAACCTTTCTTTCTCAAA
CATTCTTAGCCTATATGAAAAATGTAAAGTGAGTTACTTTAAAGTTACTT
ACAACTGTAATAGTGAGTTTAATCTTTTATCTCAACTTCGCCGGGTGTCT
CTTTTCAAAGTTCTCCGCTTCAAGTTTTCTCAGAGTTAATCTCTTAATTC
TTAATAAATGATATTGGATCGTGCATCTTCTATCTCGAAGCTTTCTTTCT
CAAACATTCTTAGCCTATTTGATGGTATGAAAAATATGAATGTAAATTAA
GTTACTTTAAAGTTACTTACAACTGTGATATGAACGTATATTGACAAAAC
TGGGATATAAAAAGCTGTATTATTGACTTGCTAAAACAATATGGTGCAAA
CACTCAAAATTCAAAACCAATCGCTTAAAAACGCAGTATTTTAGTTCATA
ACTCCGCCCTGAGATATGCCATATCTGAGCTAAACCTTCTTCAAAGTATC
AATGGTGTTTCACGATAGTCTGTCCCTTGATTGATCTCTGTAAGAAATCC
CTTTCTAATGTCTACACCCTTTCTATCTTAGTTGAGATCTTGTGTCGGAA
GTAACCCCTGTCAAAATGGTGGATTATGTTTCCAACAAGGAATATCGCAA
GCTTGTATCTGCAACAATGGATTCACCGGCTCCAACTGTCAGGTAAGTAG
TTGAATTTATAAAACAAAGTAAACTAAATTATAGCACTTGAAAAACATAA
AGCCATCGCTTAGAATTAACTAATTTTGGCTTAATTCTTTTCTATTTAAT
TAGGTTCAACCACCCCAGCCTGGTGTTTAAGAATTTTTTGTTATCACCAC
ATAAATCGCACCATCAACTCCTGCCCCACCGACCAATCTACCAACAGACC
CACCAGCCAACCCACAAACTAATCCACCGACAAACCCACCAACAAATACA
CCAGCAAACCCAGCAACTAACCCACCAACAAACCCACCGACCAACCCACC
AACTAACTCACCAACTAACCCACCGACCAACCCAATAACTAATCCACCGA
CTAACCCATTGACAAATCCACCGACCAACCCACCGACCAACCCACCAACT
AACCCACCGACCAACTCACCAACTAATCCACCGATAGACCCACCAACAAA
TAATTTTTAACCCATTTATTGTATTAACCAATTTATTTTTTAAGCCTTTT
TCATTTCAAAACTCATTATTTTGTGACATTTTTATCTAACATTTTAATCC
ATGTATCATTAAAGTAATTATACAAACAAAGACAGCAAAGCGAAACAAGA
TTTCGCACAATAATATCAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052934-exon-scaffold_222-1575043694:71220..71288 | TCONS_00052934-exon-scaffold_222-1575043694:71220..71288 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1575043694:50128..50241 | TCONS_00052934-exon-scaffold_222-1575043694:50128..50241 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1575043694:49447..49557 | TCONS_00052934-exon-scaffold_222-1575043694:49447..49557 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1575043694:48820..49335 | TCONS_00052934-exon-scaffold_222-1575043694:48820..49335 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1510915933:71220..71288 | TCONS_00052934-exon-scaffold_222-1510915933:71220..71288 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1510915933:50128..50241 | TCONS_00052934-exon-scaffold_222-1510915933:50128..50241 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1510915933:49447..49557 | TCONS_00052934-exon-scaffold_222-1510915933:49447..49557 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1510915933:48820..49335 | TCONS_00052934-exon-scaffold_222-1510915933:48820..49335 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1491911889:71220..71288 | TCONS_00052934-exon-scaffold_222-1491911889:71220..71288 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1491911889:50128..50241 | TCONS_00052934-exon-scaffold_222-1491911889:50128..50241 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1491911889:49447..49557 | TCONS_00052934-exon-scaffold_222-1491911889:49447..49557 | Clytia hemisphaerica | exon |
| TCONS_00052934-exon-scaffold_222-1491911889:48820..49335 | TCONS_00052934-exon-scaffold_222-1491911889:48820..49335 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_222 | supercontig | scaffold_222:48820..71288 - |
Blast
BLAST of TCONS_00052934 vs. Swiss-Prot (Human)
Match: FAT1 (Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 2.197e-19 Identity = 38/95 (40.00%), Postives = 49/95 (51.58%), Query Frame = 1
Query: 16 ADGFTCTCEVGYFGVHCTASA--CTSHPCKYGGSCQPDGSDDGYTCSCLTGFFGNQCELRSCVGSNPCQNGGLCFQQGISQACICNNGFTGSNCQ 294
A G+ C C Y G HC S C+S PC YGG+C D + G+ C C + G +C+L PC+NGG CF C C++GF G CQ
Sbjct: 4033 AGGYYCKCSALYIGTHCEISVNPCSSKPCLYGGTCVVD--NGGFVCQCRGLYTGQRCQLSPYCKDEPCKNGGTCFDSLDGAVCQCDSGFRGERCQ 4125
The following BLAST results are available for this feature:
|
