TCONS_00052916 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052916
Unique NameTCONS_00052916
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1605

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052916 ID=TCONS_00052916|Name=TCONS_00052916|organism=Clytia hemisphaerica|type=transcript|length=1605bp
CAAAAACAAGATTCGTGCTTCAGTCAATAAGATCCAAAAAGCAGCTCCTT
GTATGAACTTCGTGGAATATGGATATCGAGCATCAAATGTACCAAAGAAT
CACGTTGAAGTCATCAGAAGTGGAGGTTGTTGGTCAATGGTTGGTATGAC
AGGAGGTAGACAAAGTCTTTCCATCGGCAATGGGTGTTTATGGGAAGGAA
CGATCATTCATGAGTTTCTTCATGCTATTGGATTTTATCATGAACAAAGT
CGACCTGATCGTGACGAATACGTTAATATCATCTTCAGAAATATAGTTGA
agGTCGTGAGCACAATTTCAAGATTGCATCAAGGATCAACAGTCTTGGTG
TTGGATACGATCCATTTTCTGTTATGCATTTCTCAAAaGGAGCTTTCAGC
AATGGTAATGGAAACACAATCGAATGGAAAGCTAACCCTGATTTATCACT
TGGTGGAAATAAATTGTCTGAGAAAGATATAATGCAAATCAATTTGAAGT
ACTGCGGTGACGTCAAACCTACCATTACAACTACAAGGACGACTAAAAAA
CGAACGACCACCACAAGAACTAAAACAACAACGAAGCGCCCAAAAACTAC
AAAGACCACCAAAATGACAACAACGACCCAACGGCCTGGAAAAGCATGTG
GTGACCGAATGGGAGCTTGCATTGCCGTTCAATTCAACAAAGGCTTATGC
CGTTCGTATAATAAATACTACTGCCCCCGATCGTGTGGTTCCTGCAAAGG
TCCCGAATCTGAAAAATGTATGAATTTGAAAGATACAAGATATGATTGTC
AATCAAGAGCTAAACGTGGAGAATGTCAATCTCGATATCGATCTCAACGA
TCCATAATCCACAAACGGAGAATGAAGACTCAATGTCCACGTGTTTGCTG
CGATCGTGGAGAACTCTATAGACGTCCCCAATAAAAAAAGAggcaataaa
aataataatctaaattttgatatataaaaacaaGGTCTCAATTTTATGCA
TTAGAAAAAACGTGGATTATCACTATCAGATGATTAAAGTCCAAACAATT
TCAGCCTTTATTTTTAGGCCTACGTTCTCTACTCTAGAAGAAATAGAGGA
AAGAGTTTTTCACTTTCACATCTTTTGTATCATTTATCGTAATTTTTACT
GGGATTTGACTACCTTTTCCAATTTTACAGCCTTTTTCCTGCATTTtcaa
ataatgaattaatactttaatgggataaacttttgcagggattaaatttc
gcggttgggcctttccgcgaaattcaaaaatttcgcgggtggcaatattt
tcacgattttgtggcTTTTACTGCCAAATCATGAATcgtggttgttgaaa
tacacattattagcgctcctttgatgcaagtaaccattcaaatagtattt
atctgacatattttgagttttgtttagaaatatttcgcggaagaggccct
tccaaatttccattaggatttaattttgcggattttcgcggatgacaccc
aaatccgcgaaatccgcgaaatttaatccccgcgaaagttcatcccatta
aagtatcgcATCGATGAATATTTATTATACATTATTTATAATAAATTAAT
CGAAA
Run BLAST on NCBI

protein sequence of TCONS_00052916-protein

>TCONS_00052916-protein ID=TCONS_00052916-protein|Name=TCONS_00052916-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
KNKIRASVNKIQKAAPCMNFVEYGYRASNVPKNHVEVIRSGGCWSMVGMT
GGRQSLSIGNGCLWEGTIIHEFLHAIGFYHEQSRPDRDEYVNIIFRNIVE
GREHNFKIASRINSLGVGYDPFSVMHFSKGAFSNGNGNTIEWKANPDLSL
GGNKLSEKDIMQINLKYCGDVKPTITTTRTTKKRTTTTRTKTTTKRPKTT
KTTKMTTTTQRPGKACGDRMGACIAVQFNKGLCRSYNKYYCPRSCGSCKG
PESEKCMNLKDTRYDCQSRAKRGECQSRYRSQRSIIHKRRMKTQCPRVCC
DRGELYRRPQ
Run BLAST on NCBI

transcript from alignment at scaffold_222:353631..372632+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052916 ID=TCONS_00052916|Name=TCONS_00052916|organism=Clytia hemisphaerica|type=transcript|length=19002bp|location=Sequence derived from alignment at scaffold_222:353631..372632+ (Clytia hemisphaerica)
CAAAAACAAGATTCGTGCTTCAGTCAATAAGATCCAAAAAGCAGCTCCTT
GTATGAACTTCGTGGAATATGGATATCGAGCATCAAATGTACCAAAGAAT
CACGTTGAAGTCATCAGAAGTGGAGGGTAGGgtggaaattttattgaata
aaattgttttatattataattgaaaattccaAGTCTCCCCTTCCGATAAA
ATATGAACTCATTTTAAGGACGTGACCACAATATCTTTATATTGCCTGAA
AACACCATACCAGATTTGATTTAGTGTTCTAAGATGTTCTTGCAATACAA
TATTGAAACCTATTATCACTTTTTTAAGTGGAGGGTAGGTAAATTTTATC
GAAAGAAATTGTttgattcaaaacaaaattcaactCGATACAAAAAATGG
AGTAATTTCCAGAACGCGCCCTCCCACAATAAGAAATTTCTATGGAAAAA
AAGTCTCGAAATATCGCACATATTTTGACTTAGTATTTCAGTATTCCTGA
AATTCTCTGTTCAAAGATGTTCTATAAATATACTATTGAGCATACTTTTA
CTACTTTATCTCCTAGTTCTTTGTTTATGGTTGGCATTTCTTTTAAAgtg
gatttgattaaaaagattCTCCCTTGCATATTTTAAGTCCAGTATCGCAT
TACATACACTAATCCCTTAAACTGTACCGTTTCTTTAGTTGTTGGTCAAT
GGTTGGTATGACAGGTGGTAGACAAAGTCTTTCCATCGGCAATGGATGTA
TGTGGGAAGGAACGATCATTCATGAGTTTCTTCATGCTATTGGATTTTAT
CATGAACAAAGTCGGCCTGATCGTGACCAATACGTTAATATCATCACCAG
AAATATCGTTGGAGGTAAAGATTTGATTTCCGCAATACTGGTGTTATTAT
CCTAATATAACCTCTCTGATTtccgggacaagctggagtttttacaagct
ctcgtttgatttggttggtcgttaacctgtaataaaacaattttgttact
ttttctaaagaacgcatcatttctattacttcaaataaccaattagtgaa
gtctcttgtaaaaactccagcccatCCCTGATTTCCATCACACCCTAATA
TAAATTGTATCTGAAAATAATGTGGCCAGTCGATataattttgcgcccct
cttatCTACGCTACTGATAATTCTCAAATTATATAAACGTCgcgttgaaa
aataaaaatcctgTAATCCAAATTATTAAATTTAACACCTCGCTATGAAC
TTCTACTTCATTCATTTGctatatttttatcttttaggTCGTGAGCACAA
TTTCAAGATTGCATCGAGGATCAACAGTCTTGGTGTTGAATACGATCGAG
TTTCTGTTATGCATTACTCAAAGTAAGATATTGCCAACATTGGTTCTTAC
GTAACCTTGAAAAGGtctgtttccaaaaaaaaatggCAGTCCGCTAATTC
TGAAACATtatcgagtttatgtattcgagaacAACCGGAGGCAACAtcga
gccgtacatcaactattgACTTTGTTTTGTGTCGATTTCACTTACCTTCG
CCCTCGATAACATAAACTCCCCTtgtaaaaattcttgataagatctgaaa
agatcgttgaagatctttcaagatctttaacaagtaagaatctttaaaaa
atctttgtaagatcttacaacgATTCTTAggcaatcttgaaaatttcttc
caacaaaaagatctttaaagatcttgtaAAGAAATCGTTAAGNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAGAA
TCTTAAAAGCACGTAAATTTCTGGTTatgattgtttttcataagaaggaG
TCTTTAGACTCAAGGAGAGCAATCTCTTAGGATAGTATTTACGAAACAGT
TTTTGGTCAGCTTCGAAATACGGTAAgtggtttttttcttttgtgtgtGT
GTTATCATTGACTGTACTAATGAAATAGTTAATTAATGACGAGATCATCA
GTTGAATGCTGTCACTCGAGCGAAGCTTTCGGCCCTTATTCAATAACTGA
ACGGGGATAGTAGTAAAATTCCgtcagcgaccgtagtgcagtggtagagc
atccgtctACAgtgtgcaaggttgtgggttcaacccccggCCGGGTCACA
CCAAAGATTcctaaaatggtacttgatgcctctctgcttgatgctcagca
agtAGGTGGAGCAatccctcccctaccttcaggtagatagctatcgaaag
tgGAGCCTGCAGGTCATCTccgacttacttttacttaaAATTCCGTCAAG
ATCTTGAATCACTGTAAGGGACAAGAATCTTATTCAAAACTTATAAAAGA
GTCTTATCAGATCgttaaagatcttgaaagatcttgGCACGTTCgtagta
agaaactgaaaaagaagaagcaaagtttcttgataagatcttttcaagaa
cttttcaagaatttttaccagggtCGCCATTGCTTTAAAAGAGAAGACAG
ATTTTCTTAAGTGATTCCTGGATGGTCAGATTAACTAAGGTTGATTAAAG
TCTTTTANAAGAGAAGACAGATTTTCTTAAGTGATTCCTGGATGGTCAGA
TTAACTAAGGTTGATCAGAGTCTTTTGGAACATCTTTTTTCTACGAACTT
TCGATGGACTCACAAATCATTAATCAAACAAAACTTTTTCTTCTTCCAGA
CGAGCTTTTAGCAATGGTAATGGAAACACAATCGAATGGAAAGCTAACCC
TAAGTTATCACTTGGTGGAAATAAATTGTCTGAGAAAGATATAATgcaaa
tcaatttgaaatactGTAGTGACGTCAAACCTACCACTACAACTACAACA
GCCACTACTAAAAAACCAACGACTACGAAAAAACCAACGACTACCACAAA
AACTACAAAAACCACAAGAACTAAAAAAACAACGAAGCGCCCGAAAACTA
CAAAGTCCACCAAAATGACGACAACGACACAACGGCCTGGAAAAGGttgg
aaaatcaaatatctttcCTAATTTTCATACAAAGATAGTACAAATTTTAA
GAATAGTTTATAGAATAGACGCTAAAAAAGGTAGATTTTTTCGCCTCTAG
TGTCAGACCTGGTGTAGAGTAAAAAACCGCTAAAATGGAAAAAAGCAATT
ACTCTCgtgtacctaatagccgggggatttgaataagcagggggttggaa
aaatggTGGGTTGGAATTagaaatgtcctgggtggaaaacttttttaaag
gaGGCTAATACTGCNtctgtaaacatctccgccactgcttactccacccg
aatttatcacgcctctcctaaactattcccttttttagtgatcttgtgta
gacgataggatcgtctacagGGTTACCAAATTAATCCTGCCTCCGAAACT
ATTCCCTATTTTAGTGATAGTCTACCTCGGGAGTTACTTTGGTATAAAAT
GGGTTTTGACAAGTATATGCGAGCTTTAAGGACAGTAAGGATCCCTTTTT
AAACCCTCAAAAGTCTATTAAAGGGGTGCAAGAACCATCACGAATAAGCA
ATTGAAAGGGAACGGAAATATCAAGATCAACTCCCTCAAAGGATAATANG
AGAGTATCCTGTAGGATATCTTTCTTGGAAAACTTTggcaattttgaaat
aagattTTGTAATGCAATCCAATCTAAGGTCACTTTTTCCATAAATCATG
ATacaaatctcataaaaaagtctCACGTAGATCAAATCATGACATTGCAA
TAAACTTGTCTTTGATACTTTTCAGCATGTGGTGACCGATTGGGAGCTTG
CATTGCCGTTCAGTTCAACAAAGGCTTATGCCGTTCGTATAACTATAAAT
ACTACTGCCCCCGATCGTGTGGGTCCTGCAAAGGTCCTAAATCTGAAAAA
TGTATGAATTTGAAAGATACAAAATATGATTGTCAATCAAGAGCTAAACG
CGGAGAATGTCAATCTCAACGCAGGAGATATGGATCTGTTCGCTGGAGAA
TGAAGACTCAATGTCCACGTGTCTGCTGCGATCGTGGAGAACTCTACAAA
CGTCCTCGATAAAAAAAAGAGACAGTAAAATTAATAATCTAAATTTTGAT
ATACACAAAGACAAGGTCTCAATTTTATGCATAATAAAAAACGTGGGTTA
TCAGATGATTAAAGTCCAAACAATTTCATCCTTTATTTTTAGGCCTACGT
TCTCTGCTCTAGAAGAAATAGAGGAAAGAGTTTTTCACTTCCACATCTTT
TATACCACTTATGGTAATTTTTACAGGAATTTTCACTACCTTTTCCAATT
TCTTCCTGCATTTTCAATTAATGAAACAATATCGCAATATATCATTTATA
ACAAATTAATCGAAAGCAATGATTGCTTATTGCTTCattaaattatttat
ttatttatttatttacttgatttatCTATTTGCCATTTAAAGTAAACAAA
CTTACAAATGATTAATCTTGGAATTGTCTTGTCTTTCAAACCACCTTCTA
CCTCCTTCTTTCAGCAGGGTtactagacgatgttatcgtccgttacagtg
ataataaaggcgggaaaaatggctgtatggcgttatggcggtatacgaaA
AAAAACGGCGGGAGAGTTTCNgttaaaactcagagttaaaactctaccct
tcgaacctactttagagcacatacaaatcgattgtggtttcaaaacaccc
cggtgaatttcccttttgtgccaagtattttgtcactgattgtagattcC
CTCTTGTTGATTGACGTCACAGAATCGCTCACTTATGATTAAATACGTGA
TAAACGATCACGGTTGCAATAACATTCGAGTTGTTGACAAACGCCATAAT
TGGTCTGTTCTTTTGTTTAAAGGGGCATTGGCAATCAAAGATTTAAATAG
CAAATCGCAAATAGCATTAACTATCTAGATTCCCTCTTGTTGATGATTGA
CGTCACAGAATCGCTCACTGAAGATGAAATACTTGATAAACGATCACGTT
TGCAATAACATTCGAGTTGTTGACAAACGCcataatacacctttcctgag
tttttttcgactttttgaaaaacactgttCCAAAACCCTGCTCTACtttt
tatcgaccgccggaggcggtttctttcatagtggtacgctaatctcgttt
tgccttggctcattactttgtctaccatttactttcgggtTTTTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgag
acatgaaaaatgactatattgtaatctgttttcaatgaataatctaaaat
gtactggagatgacatgtaggcgttaataatgtgcgcgcactctctcgcg
agcgtgatgcgtgatggaaggcggtcgtttcagtgtggtttagatccaca
ctgtgacctagttaatttcgcctagcgaaagtattacgatagcctttcgc
ggcggcggtgtaataaaaaatttacaaaacgaaagtactcgatacggtgg
acaaactcactaaattcaatttacaaattacacgctcgtataaccacgga
cgattttcgggcgttttctttggattacgtcatatagcTTTGtttcttta
gcttcacagtttggattttttctttattttcttataagcatatactttat
aagaatcaaatcaataactcttgataaacggtgatatacccttcgataat
tagttcttacaaagtaaataaggaatggtgcacaatatgagaatatctat
ttttcttataagcatatactttataagaatcaaatcaataactctcgata
gaaggtgatatagccttcggtaattagttcttacaaagtaaagtaaacaa
gggatggcgcacaatatgagcatatttatttttcttataagcatatactt
tataagaatcaaatcgataactcttgataaacgatgatatagccttcggt
aattagttcttacaaagtaaacaagagatggcaggcaatatgagcatatt
catttttttataagcatatactttataagaatcaaatcgataactcttga
tagacagtgatataccgttcagtaattagttcttgcaaagtaaacaaggg
atggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNtaaacaagagatggcgggcaatatgagcata
tttatttttcttataagcatatattttataagaatcaaatcaataactct
tgatagacggtgataaaCCCTTcgataattagttcttacaaagtaaacat
gggatggcgcgcaatataaacatatttatttttcttataagcatacactt
tataagaatcaactcaataactcttgatagacggtgatatacccttcggt
aattagttcttacaaagtaaacaagagatggcgggcaatatgagcatatt
tatttttcttataagcatatattttataagaatcaactcaataactcttg
atagacggtgatatacccttcggtaattagttcttacaaagtaatcaagg
gatggcgcgcaatatgaacatttttaccttatcggggaaaacttcgtcgg
ggaaaaatgtTCGTAACTTGCTGTTCTTAAGAATTAAGCAACCATTGTTC
GTAAATTGATCTTATCTTTTTAGCGactttgagcctcgttgttcatataa
aattgtttcatcaaggctcgatgtaaagtagacttcagattagcttccat
ctctacttcttgttttttcccatgcagtttgaactttaggcgaaattttc
gacttcaagtcgtcttgtttaatTTAGAAAGATTCTACTACGaaatacaa
aatcaacaaaaaaagaattatgttAAAAGCTCTTCCggttcttgagatat
ttcaattttaaagtttttccttAAACAAAAGTATCCCATGGAAACGGCAT
AGAAACGAGGCCCGGTAggataaaatatcttttaagaGAGGTTTGactgt
aaaaaaaaaaggaattaaaacagccataaaaaaggaacggaaaaagcttt
tgatctcaaattttcagaatgaCTTTGTATcaccaaaagtttcaaaagta
TCAAGTTCTCGTTTCAAACTAGAGAGGTCGgaaaaaaatcgataaacttg
ggaaaggtgtattggtcTGTTCTTTTGTTTAAAGAGGCATTGGCAATTAA
AGATAAAAAACCAGAAATGAACAGGGAAATGGACTCGGGTTTGAAAGCCT
CTAGAGACTTGAATTTGTTCCGCTAAaaaaagtctgtctcgaaataattt
gcagctggagaaataaatagctgtaacttttgatagaattcgaatcaagt
tacggttttgtgctcgttaaaaagatattNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttttaacgagcac
aaaaccgcaacttgattcgaattctatcaaaagttacagccatttttttc
tccagctgcaaattatttcgagacagactttagttaatttttgatttttt
taaaaaatttgttcaacaTTTTCAGTATTACTATCACTCTGACGATGCTT
TTGTTGTGAAGCAAAATattagcttttcaaaaaatgaaaattttgttgtt
tgtgatctGACTCCACATTGATTCatggcaaaatcaattttcgtattaag
ttttatcttgtttttactgaagctgtcatatggtcaaaatttttggataa
ataaagtttaaaaacttTGGCTGGACATCGGGAAAAATGTTATCTCGAAG
GGTATCGATTTTCGCACTTTGATTTGGTTACCACCTAATCAcatcgcaaa
cctagtaccagCCTCCTCCGAGGCTGATGACTGAGCATTATTTGAACAGT
AAATTCAATGAACCTAAAATCTGCCAAAAAGTATCAAATTTAAGACTCAC
CCTGTAGTAAGGAAGACGGCGAATTAAGTGTGTCTTTTTTCCAAATAcat
acatccccttctcacagacccggtaggattttctCATCCAGTAGGGATGA
AAATAGTGGACTGAAACTCgacggggattgatattcccatattttttatg
gctggggatttcataatattcaatatcataatattttgcagtgaggattg
gtttatttgattattttcagtggggacaaaaactgGAGGATAATCTCTAa
ccggggacaatattttggacaattttactAGTGGGAAGGGTTCTCTCTCA
GTGGGTATGAGGGGGTGTATAAATGTTTGTGAACATTAGATTGGTGgtga
aagaacgttgtgtgctagctgggtgACTAACGGATTAACcaattaaagat
tttgtttgatttttggtGAAGGTCAGCTATATCACAACCTTTTATCAAAG
GCCTTGTTTGACCCATAGATctataaagcccaaagggcttgATGGCGTAC
TTTTTGCTGAGAAGTGTgtcgtggttaggtaggaaaccCTACTAAAGTCA
CCATAATAAATAGCAATAAATTGCataaaacaatagcaacaatatttttt
ccgatattcacttttttttgcctgcgatggcttaaagcacgacatctagc
ccttcgagctttatagagaagaattttgaatttctcaTTCATTAAAATGG
GTCGGCGGGAATGTTCTGTAGCCAATGGAACAGAATCATAAAGGTCACAA
AGGTATTGTTATTACCTGGAGCTTTCATTAGAGTATTCTCCCCTTGTTAA
AGTATCTAATATGTCACATACCCATTAAAACCTCAGTCCCACtgttggaa
aatttggcaaaaaatctCGTCCCCGTTGGGAAAAATaccttagaatttca
gccccactggtaaatttactttgatttcatcccccattcgaaatgtttaa
aaattgcacttcaaagcCTTCCCCACTGGATCTTTTTATCTTGGAACAAT
TTACCCCCATTGTAGGAAAAATTTTAACGgaactgtgagacagggatgtc
ttCGTTGGGTAATCATACTGGTATTCTTAGCGAGGCTACTCTTATAATAA
GGTCGCAAATAAGATTAAGTGGAATGATATCAACTTCATCCTGCCAAAGT
CtactaaaatttggaaaaatgacAAACTATCGTACTTTGTATTACATCTG
ACCGACGGTAAAATATAACGTCATTATTACGACAATAAGACGCACTGACT
TTCCAAAATCACGGCACGTATCTCCGCCTTTGAAGATTCTCCAATACgca
aaatattgtttcaatttttctggTTATTAGATGTCAAGTTTGGTATATAA
AGTGTAATGGATTTGGTTTGAAAATCAGAACGCTATCttaccatcatcat
catcattgctcgaccTCAGTCgagacaaaaaaagaaaaagaaagaaaaaa
agacgtTATCTTACAATCACTCCTTAGGATTGTGTAATAAGTACCCTTCT
tgttacacacttttttttataagaatacactttataacaatgtccatgat
gaaaatggtcaaaaaattaagaatatgctaagaatatcaccatcatggaa
ttttgctattcaagctaagaatgccatttttaaagcatttttgattataa
atagtcaattacccccaagtaaggctcgcTGCTCAAAGCTTCTGCTTTCC
TTCCAATTCCAATTGTTGACTCTTTGCGACATGTGCTTCTTGTTGCACGT
CCAATTCAGATCTGCTTCTTTTAGATTTTCTTCGCTATTTAAACTTTTCT
GATATTTGATAATTCGTTAATTTTCGAAACGTTTTGGTCACGTTTTTTGC
AGGGGAAGGTACTTTTTCTTTCTGAAGGTAAATTCCTGAAGAGATCACGT
TTCTTGCAGGGAAAGTACTTACTTTGTGAAGGTAAATTCCTGAAGGAATT
ATTGATCAAGTCCGAAACGTTTTGGCTACGTTTTTGCTACGTTTTTGCTG
GAAAAGTACTTTTCTTTGTGAAGGTAAATTCCTGAAGGAATGTTTAAATA
TCTGAAGGATTTGTTTGATCAAAAGTCGGAAACGATTTGGTTGCGTTTTC
TCTAGGTTTTTCTTAATAGAAAGAATTTCAATTGTAAGCTTATAAGCGAA
ATCGGCGTGCCATTCTTTTGGTATAATTTTTGGTGAAGTGAAAAATTGTA
TAAAGAttcttttaaccctttaagtgccgatgtcgtatatatacgacatg
ggctatataggagggcgaagccctcctgtaatgcccagtttgagttagaa
atcgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNcttctaattccttctagatcaggagatataagcccttaa
agtttgaactagcgattttttaaaaaaaacttagaaaaaaggaccctggc
actcaaagggttaagaagattttttgaacaatatatcttttgtgaagaaa
ttttatagTTTTCACTTTATTCAAATATGATGAAGATTTTTGTATTTCTT
TGTATGATTGTGTTCATACGCAGTCATCCTTTGAACCATCCAGGGGAAGA
GAACCCAGCATTTGACTACATCAATGATGCTGATAAAGGTTGGTATACAC
TTCTTTCGTTATTCGAGCATTCAATTCGAGAATTTTTTTCCTATACAGta
tcaattattttgatgatgcAAATTGActaatttagtctattttgaacGTT
ATTTATGACTTTTTCTACATTTAGATCTCGATAAAGAACATTTCGAAGAA
GGCGATATTGTCAAAGTGCAAAATCGTGCTGCTTTGAAAAAGGACCGGGG
TCAATGGCCGAAAGGCATTGTTCCTTACACCATCTCAACTGTTTTTAGTA
AGTACATTTCTAATGATAAGTAGTCTGGATTTCCAGACCACTATTCTTTT
AACACAAAACGTAGGAGCGATCCTGCctcaaagtcaaaaagaagaaaaaa
ggcCTTACGGGAAAGTTTTTCTACTACTGAAAAGAAGCTTTTGAGTAAAA
GTGATGTTAATTAGTAGTCTAGCTCTAGACTAATTGATAAGCAATTGTTC
AATCATAAAACCCCCGAGGTTATACTTTTTTTNGACTAATTGATAAGCAA
TTGTTCAATTATAAAACCGTCGAGgttatactttttttaaatagtaAAGG
CGTTTTGATACCAACGTTACATTCCAATAAAATCAACCTCATCCAGTCTT
TAACCTTACTAATAGACTCCAAAATATTAGAGTCAGCTTATGTATTAACA
TACTTTttaggacggtagagtgacaaGGTGATTTTAAATAACCTGCAGTT
CTGAACagcaaaataaaagtaaaagtgCTTGTTTACCGACGTCATCAAGT
TAATCAAGATGAAGACATAGCAGAGAACTACAAGTCTCTAccgaagaaaa
aaaacagatgCATACTTGCTATTATCTGGTATTGtgatactcttgtctcc
cgaatagacgggggggtccgaataagcaggggggtaggaaaattttctaa
attctaataagcgggggggggatggaataagagggaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTATTTATgctacggccttgaaattttc
agggtatgtTCAGGAAGGATAAAGGATCCTAAAAAGCCCTATATcccgaa
attgataaatttttcaccaattttcaaaatctcatatgactaccccctta
atcaattgtttttcttctttcagaGGAGCTTTCAGCAATGGTAATGGAAA
CACAATCGAATGGAAAGCTAACCCTGATTTATCACTTGGTGGAAATAAAT
TGTCTGAGAAAGATATAATGCAAATCAATTTGAAGTACTGCGGTGACGTC
AAACCTACCATTACAACTACAAGGACGACTAAAAAACGAACGACCACCAC
AAGAACTAAAACAACAACGAAGCGCCCAAAAACTACAAAGACCACCAAAA
TGACAACAACGACCCAACGGCCTGGAAAAGGTTGGAAAATGAAATAACTT
TTCTTAATTATCATACAAAGATAGTACAAATTTTAGGGATAGTGTTGACG
CTCCAGCGTCAGACCTGGTAAAgtaaaaaatcactaaaatgaNCAATAAA
TCTTTATATTGCCTGAAAATGCCACACCAAATTTGATTTAGTGTTCTGTC
CCTATATATTCATCTTCGCTAAGAAAGTAAATAAAATTCTCTGTTCTAag
tagcctgttagacgaaaaccgcttttttatcgcgataaaacaaagaaaaa
atttggtttgtgggaaggtactggctatGTTCTAAGATGTTCTGgcaata
aaatattgaaactaTTATCACTGTTTATCTGTCAGTTTTGTCAGTTGAGT
TTAAATAGGAAAGTCTTTTTGAGTATGGAAAGTCTTCTGTATTTAACATa
ctttaagggaacttattttggcggaaaCTAATTTAGACGaaactcgccaa
aattagttcccaccaaaatttaatattttgctCCATCgcaaaaataagtt
cccgccaaaattaaattttttgtttccttgcctaaatagcccctgaaatt
caccaaaattagtacccggtaaaataagttcccttatgGTATTTTGATTC
CAATATCGAATTCCATGCATCGAAAGCATGGAATTTCATTACCATAACCT
TACCTTTTTTTATTTCCCCTAGTTGTTGGTCAATGGTTGGTATGACAGGA
GGTAGACAAAGTCTTTCCATCGGCAATGGGTGTTTATGGGAAGGAACGAT
CATTCATGAGTTTCTTCATGCTATTGGATTTTATCATGAACAAAGTCGAC
CTGATCGTGACGAATACGTTAATATCATCTTCAGAAATATAGTTGAaggt
aaaatttatttttcaacacTGCTCTAACTAGACTTTGATGCATCTTCTCT
GGTATGAATCATCTTCTATCATCTTTTTATCACCTAATTTTAAATTGTGT
CTCTATTAGAGTGACCTATAAGCAttatttttaggattatttatttttat
ttttatttattttattttattaattgtctttcaggctcttccatatttta
caatggctattcgtcctatgtaaaaataatcatatttaaataaaaagata
attatattctatgaaaaaaaatatgctgtagaaacaaaacacacaaaaaa
aaacaactcaagaATACTGACAAAGCTCACAAAATTGCAGATTGTAAAAC
CGTAAAATTATCTTTGGAGTTATTAGAGATAGCCTCCAAAAATGAGATTC
TCCGCGCTCACCCACTCACTCTGACCCAATTCAACCCTACCTCCCATTCA
ACTGATAAAAAAATTGTGCTGAAACTTTAGAATTCTGAAATTGTCAATCA
TCCAAATTAACGGTTGCGGAATATATGAAATTAGATACTCGTTCATTTTT
GAGGATTTCTAATCCAGTTTAGTAGCTAGATAAAAATGGACAGAATTCTT
TCATCTTTTAGGTCGTGAGCACAATTTCAAGATTGCATCAAGGATCAACA
GTCTTGGTGTTGGATACGATCCATTTTCTGTTATGCATTTCTCAAAGTAA
GACATTGCCAACATTGTTTCTTACATGATCTTATTAAAGTCTGTTTTCTC
CTTTCAGCTTTTATTTAAACAAAATCGTGTCCAAAGAATCTCTTTGACTT
ATTACGAAGAAACGATTTCAGTATTAATcaattgtttttcttctttcaga
GGAGCTTTCAGCAATGGTAATGGAAACACAATCGAATGGAAAGCTAACCC
TGATTTATCACTTGGTGGAAATAAATTGTCTGAGAAAGATATAATGCAAA
TCAATTTGAAGTACTGCGGTGACGTCAAACCTACCATTACAACTACAAGG
ACGACTAAAAAACGAACGACCACCACAAGAACTAAAACAACAACGAAGCG
CCCAAAAACTACAAAGACCACCAAAATGACAACAACGACCCAACGGCCTG
GAAAAGGTTGGAAAATGAAATAACTTTTCTTAATTATCATACAAAGATTG
TACAAATTTTAGGGATGGTGTTGACGCTCCAGCGTCAGACCTGGTAGAgt
aaaaaatcactaaaatgaaaaaaaagcagTTATCGTGTAGGATATGTTTC
TTGGAAAAATTTGGGGattttaaaatagaattttgtaaTCCAAGTTCACT
TTTTCCacaaattataataaaaatctcataaaaaagtctCACGTAGATCA
AATCATGACATGGCAATAAACTTGTTTTTGATACTTTTCAGCATGTGGTG
ACCGAATGGGAGCTTGCATTGCCGTTCAATTCAACAAAGGCTTATGCCGT
TCGTATAATAAATACTACTGCCCCCGATCGTGTGGTTCCTGCAAAGGTCC
CGAATCTGAAAAATGTATGAATTTGAAAGATACAAGATATGATTGTCAAT
CAAGAGCTAAACGTGGAGAATGTCAATCTCGATATCGATCTCAACGATCC
ATAATCCACAAACGGAGAATGAAGACTCAATGTCCACGTGTTTGCTGCGA
TCGTGGAGAACTCTATAGACGTCCCCAATAAAAAAAGAggcaataaaaat
aataatctaaattttgatatataaaaacaaGGTCTCAATTTTATGCATTA
GAAAAAACGTGGATTATCACTATCAGATGATTAAAGTCCAAACAATTTCA
GCCTTTATTTTTAGGCCTACGTTCTCTACTCTAGAAGAAATAGAGGAAAG
AGTTTTTCACTTTCACATCTTTTGTATCATTTATCGTAATTTTTACTGGG
ATTTGACTACCTTTTCCAATTTTACAGCCTTTTTCCTGCATTTtcaaata
atgaattaatactttaatgggataaacttttgcagggattaaatttcgcg
gttgggcctttccgcgaaattcaaaaatttcgcgggtggcaatattttca
cgattttgtggcTTTTACTGCCAAATCATGAATcgtggttgttgaaatac
acattattagcgctcctttgatgcaagtaaccattcaaatagtatttatc
tgacatattttgagttttgtttagaaatatttcgcggaagaggcccttcc
aaatttccattaggatttaattttgcggattttcgcggatgacacccaaa
tccgcgaaatccgcgaaatttaatccccgcgaaagttcatcccattaaag
tatcgcATCGATGAATATTTATTATACATTATTTATAATAAATTAATCGA
AA

Coding sequence (CDS) from alignment at scaffold_222:353631..372632+

>TCONS_00052916 ID=TCONS_00052916|Name=TCONS_00052916|organism=Clytia hemisphaerica|type=CDS|length=4665bp|location=Sequence derived from alignment at scaffold_222:353631..372632+ (Clytia hemisphaerica)
AAAAACAAGATTCGTGCTTCAGTCAATAAGATCCAAAAAGCAGCTCCTTG
TATGAACTTCGTGGAATATGGATATCGAGCATCAAATGTACCAAAGAATC
ACGTTGAAGTCATCAGAAGTGGAGGTTGTTGGTCAATGGTTGGTATGACA
GGAGGTAGACAAAGTCTTTCCATCGGCAATGGGTGTTTATGGGAAGGAAC
GATCATTCATGAGTTTCTTCATGCTATTGGATTTTATCATGAACAAAGTC
GACCTGATCGTGACGAATACGTTAATATCATCTTCAGAAATATAGTTGAa
gGTCGTGAGCACAATTTCAAGATTGCATCAAGGATCAACAGTCTTGGTGT
TGGATACGATCCATTTTCTGTTATGCATTTCTCAAAaGGAGCTTTCAGCA
ATGGTAATGGAAACACAATCGAATGGAAAGCTAACCCTGATTTATCACTT
GGTGGAAATAAATTGTCTGAGAAAGATATAATGCAAATCAATTTGAAGTA
CTGCGGTGACGTCAAACCTACCATTACAACTACAAGGACGACTAAAAAAC
GAACGACCACCACAAGAACTAAAACAACAACGAAGCGCCCAAAAACTACA
AAGACCACCAAAATGACAACAACGACCCAACGGCCTGGAAAAGCATGTGG
TGACCGAATGGGAGCTTGCATTGCCGTTCAATTCAACAAAGGCTTATGCC
GTTCGTATAATAAATACTACTGCCCCCGATCGTGTGGTTCCTGCAAAGGT
CCCGAATCTGAAAAATGTATGAATTTGAAAGATACAAGATATGATTGTCA
ATCAAGAGCTAAACGTGGAGAATGTCAATCTCGATATCGATCTCAACGAT
CCATAATCCACAAACGGAGAATGAAGACTCAATGTCCACGTGTTTGCTGC
GATCGTGGAGAACTCTATAGACGTCCCCAATAAAAAAACAAGATTCGTGC
TTCAGTCAATAAGATCCAAAAAGCAGCTCCTTGTATGAACTTCGTGGAAT
ATGGATATCGAGCATCAAATGTACCAAAGAATCACGTTGAAGTCATCAGA
AGTGGAGGTTGTTGGTCAATGGTTGGTATGACAGGAGGTAGACAAAGTCT
TTCCATCGGCAATGGGTGTTTATGGGAAGGAACGATCATTCATGAGTTTC
TTCATGCTATTGGATTTTATCATGAACAAAGTCGACCTGATCGTGACGAA
TACGTTAATATCATCTTCAGAAATATAGTTGAagGTCGTGAGCACAATTT
CAAGATTGCATCAAGGATCAACAGTCTTGGTGTTGGATACGATCCATTTT
CTGTTATGCATTTCTCAAAaGGAGCTTTCAGCAATGGTAATGGAAACACA
ATCGAATGGAAAGCTAACCCTGATTTATCACTTGGTGGAAATAAATTGTC
TGAGAAAGATATAATGCAAATCAATTTGAAGTACTGCGGTGACGTCAAAC
CTACCATTACAACTACAAGGACGACTAAAAAACGAACGACCACCACAAGA
ACTAAAACAACAACGAAGCGCCCAAAAACTACAAAGACCACCAAAATGAC
AACAACGACCCAACGGCCTGGAAAAGCATGTGGTGACCGAATGGGAGCTT
GCATTGCCGTTCAATTCAACAAAGGCTTATGCCGTTCGTATAATAAATAC
TACTGCCCCCGATCGTGTGGTTCCTGCAAAGGTCCCGAATCTGAAAAATG
TATGAATTTGAAAGATACAAGATATGATTGTCAATCAAGAGCTAAACGTG
GAGAATGTCAATCTCGATATCGATCTCAACGATCCATAATCCACAAACGG
AGAATGAAGACTCAATGTCCACGTGTTTGCTGCGATCGTGGAGAACTCTA
TAGACGTCCCCAATAAAAAAACAAGATTCGTGCTTCAGTCAATAAGATCC
AAAAAGCAGCTCCTTGTATGAACTTCGTGGAATATGGATATCGAGCATCA
AATGTACCAAAGAATCACGTTGAAGTCATCAGAAGTGGAGGTTGTTGGTC
AATGGTTGGTATGACAGGAGGTAGACAAAGTCTTTCCATCGGCAATGGGT
GTTTATGGGAAGGAACGATCATTCATGAGTTTCTTCATGCTATTGGATTT
TATCATGAACAAAGTCGACCTGATCGTGACGAATACGTTAATATCATCTT
CAGAAATATAGTTGAagGTCGTGAGCACAATTTCAAGATTGCATCAAGGA
TCAACAGTCTTGGTGTTGGATACGATCCATTTTCTGTTATGCATTTCTCA
AAaGGAGCTTTCAGCAATGGTAATGGAAACACAATCGAATGGAAAGCTAA
CCCTGATTTATCACTTGGTGGAAATAAATTGTCTGAGAAAGATATAATGC
AAATCAATTTGAAGTACTGCGGTGACGTCAAACCTACCATTACAACTACA
AGGACGACTAAAAAACGAACGACCACCACAAGAACTAAAACAACAACGAA
GCGCCCAAAAACTACAAAGACCACCAAAATGACAACAACGACCCAACGGC
CTGGAAAAGCATGTGGTGACCGAATGGGAGCTTGCATTGCCGTTCAATTC
AACAAAGGCTTATGCCGTTCGTATAATAAATACTACTGCCCCCGATCGTG
TGGTTCCTGCAAAGGTCCCGAATCTGAAAAATGTATGAATTTGAAAGATA
CAAGATATGATTGTCAATCAAGAGCTAAACGTGGAGAATGTCAATCTCGA
TATCGATCTCAACGATCCATAATCCACAAACGGAGAATGAAGACTCAATG
TCCACGTGTTTGCTGCGATCGTGGAGAACTCTATAGACGTCCCCAATAAA
AAAACAAGATTCGTGCTTCAGTCAATAAGATCCAAAAAGCAGCTCCTTGT
ATGAACTTCGTGGAATATGGATATCGAGCATCAAATGTACCAAAGAATCA
CGTTGAAGTCATCAGAAGTGGAGGTTGTTGGTCAATGGTTGGTATGACAG
GAGGTAGACAAAGTCTTTCCATCGGCAATGGGTGTTTATGGGAAGGAACG
ATCATTCATGAGTTTCTTCATGCTATTGGATTTTATCATGAACAAAGTCG
ACCTGATCGTGACGAATACGTTAATATCATCTTCAGAAATATAGTTGAag
GTCGTGAGCACAATTTCAAGATTGCATCAAGGATCAACAGTCTTGGTGTT
GGATACGATCCATTTTCTGTTATGCATTTCTCAAAaGGAGCTTTCAGCAA
TGGTAATGGAAACACAATCGAATGGAAAGCTAACCCTGATTTATCACTTG
GTGGAAATAAATTGTCTGAGAAAGATATAATGCAAATCAATTTGAAGTAC
TGCGGTGACGTCAAACCTACCATTACAACTACAAGGACGACTAAAAAACG
AACGACCACCACAAGAACTAAAACAACAACGAAGCGCCCAAAAACTACAA
AGACCACCAAAATGACAACAACGACCCAACGGCCTGGAAAAGCATGTGGT
GACCGAATGGGAGCTTGCATTGCCGTTCAATTCAACAAAGGCTTATGCCG
TTCGTATAATAAATACTACTGCCCCCGATCGTGTGGTTCCTGCAAAGGTC
CCGAATCTGAAAAATGTATGAATTTGAAAGATACAAGATATGATTGTCAA
TCAAGAGCTAAACGTGGAGAATGTCAATCTCGATATCGATCTCAACGATC
CATAATCCACAAACGGAGAATGAAGACTCAATGTCCACGTGTTTGCTGCG
ATCGTGGAGAACTCTATAGACGTCCCCAATAAAAAAACAAGATTCGTGCT
TCAGTCAATAAGATCCAAAAAGCAGCTCCTTGTATGAACTTCGTGGAATA
TGGATATCGAGCATCAAATGTACCAAAGAATCACGTTGAAGTCATCAGAA
GTGGAGGTTGTTGGTCAATGGTTGGTATGACAGGAGGTAGACAAAGTCTT
TCCATCGGCAATGGGTGTTTATGGGAAGGAACGATCATTCATGAGTTTCT
TCATGCTATTGGATTTTATCATGAACAAAGTCGACCTGATCGTGACGAAT
ACGTTAATATCATCTTCAGAAATATAGTTGAagGTCGTGAGCACAATTTC
AAGATTGCATCAAGGATCAACAGTCTTGGTGTTGGATACGATCCATTTTC
TGTTATGCATTTCTCAAAaGGAGCTTTCAGCAATGGTAATGGAAACACAA
TCGAATGGAAAGCTAACCCTGATTTATCACTTGGTGGAAATAAATTGTCT
GAGAAAGATATAATGCAAATCAATTTGAAGTACTGCGGTGACGTCAAACC
TACCATTACAACTACAAGGACGACTAAAAAACGAACGACCACCACAAGAA
CTAAAACAACAACGAAGCGCCCAAAAACTACAAAGACCACCAAAATGACA
ACAACGACCCAACGGCCTGGAAAAGCATGTGGTGACCGAATGGGAGCTTG
CATTGCCGTTCAATTCAACAAAGGCTTATGCCGTTCGTATAATAAATACT
ACTGCCCCCGATCGTGTGGTTCCTGCAAAGGTCCCGAATCTGAAAAATGT
ATGAATTTGAAAGATACAAGATATGATTGTCAATCAAGAGCTAAACGTGG
AGAATGTCAATCTCGATATCGATCTCAACGATCCATAATCCACAAACGGA
GAATGAAGACTCAATGTCCACGTGTTTGCTGCGATCGTGGAGAACTCTAT
AGACGTCCCCAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033433XLOC_033433Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052916-exon-scaffold_222-1491911889:353631..353756TCONS_00052916-exon-scaffold_222-1491911889:353631..353756Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1510915933:353631..353756TCONS_00052916-exon-scaffold_222-1510915933:353631..353756Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1575043694:353631..353756TCONS_00052916-exon-scaffold_222-1575043694:353631..353756Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1491911889:370103..370278TCONS_00052916-exon-scaffold_222-1491911889:370103..370278Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1510915933:370103..370278TCONS_00052916-exon-scaffold_222-1510915933:370103..370278Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1575043694:370103..370278TCONS_00052916-exon-scaffold_222-1575043694:370103..370278Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1491911889:370892..370976TCONS_00052916-exon-scaffold_222-1491911889:370892..370976Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1510915933:370892..370976TCONS_00052916-exon-scaffold_222-1510915933:370892..370976Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1575043694:370892..370976TCONS_00052916-exon-scaffold_222-1575043694:370892..370976Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1491911889:371130..371386TCONS_00052916-exon-scaffold_222-1491911889:371130..371386Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1510915933:371130..371386TCONS_00052916-exon-scaffold_222-1510915933:371130..371386Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1575043694:371130..371386TCONS_00052916-exon-scaffold_222-1575043694:371130..371386Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1491911889:371672..372632TCONS_00052916-exon-scaffold_222-1491911889:371672..372632Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1510915933:371672..372632TCONS_00052916-exon-scaffold_222-1510915933:371672..372632Clytia hemisphaericaexon
TCONS_00052916-exon-scaffold_222-1575043694:371672..372632TCONS_00052916-exon-scaffold_222-1575043694:371672..372632Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052916-proteinTCONS_00052916-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:353631..372632 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.528998	0.969466	0.504642	0.269489	0.38611	0.299621	0	0	0.273696	0.633487	0.445051	0.393015	2.59336	0.907386	1.75745	15.4322	1.35071	1.13649	4.10038	7.50969	0.230539	0.376709	2.27122	4.01517	4.9539	2.85324	0	1.2354	14.94	13.8236
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001506Peptidase_M12A
IPR006026Peptidase_Metallo
IPR024079MetalloPept_cat_dom
IPR034035Astacin-like_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004222metalloendopeptidase activity
GO:0008237metallopeptidase activity
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004222 metalloendopeptidase activity
molecular_function GO:0008237 metallopeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00052916 vs. Swiss-Prot (Human)
Match: MEP1B (Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 7.435e-28
Identity = 65/140 (46.43%), Postives = 88/140 (62.86%), Query Frame = 2 
Query:   98 NHVEVIRSGGCWSMVG-MTGGRQSLSIGNGCLWEGTIIHEFLHAIGFYHEQSRPDRDEYVNIIFRNIVEGREHNFKIASR--INSLGVGYDPFSVMHFSKGAFSNGNGNTIEWKANPDLSLGGNKL--SEKDIMQINLKY 502
            N++ V +  GCWS VG    G+Q LSIG  C    T+ HEFLHA+GF+HEQSR DRD+YV I++  I+ GREHNF   S    +SL V YD  SVMH+SK AF NG   TI  + +    + G ++  S+ D++++N  Y
Sbjct:  114 NYISVFKGSGCWSSVGNRRVGKQELSIGANCDRIATVQHEFLHALGFWHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMDFSDSDLLKLNQLY 253
The following BLAST results are available for this feature:
BLAST of TCONS_00052916 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MEP1B7.435e-2846.43Meprin A subunit beta OS=Homo sapiens GN=MEP1B PE=... [more]
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