TCONS_00052915 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052915
Unique NameTCONS_00052915
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length408

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052915 ID=TCONS_00052915|Name=TCONS_00052915|organism=Clytia hemisphaerica|type=transcript|length=408bp
CGCTATCTTACAATCGCTTCTTAGGATTGTAAGCTAATTAGCGAAATCGG
CGCGTcattcttttgatatattttttggtAAAGTGAAAAATTGTATAAAG
ATtcttttaagaagattttttgaacaatATTATCTTTGTGAAGAAGTTTT
ATAGTTTCCATTTTATTCAAATATGATGAAGATTTTTGTATTTCTTTGTA
TGATTGTGTTCATACGCAGTCATCCTTTGAACCATCCAGGGGAAGAGAAT
CCAGCATTTGATTACATCAATGATGCTAATAAAGATCTCGATAAAGAACA
TTTCGAAGAAGGCGATATTGTCAAAGTGCAAAATCGTGCTGCTTTGAAAA
AGGACCGGGGTCAATGGCCGAAAGGCATTGTTCCTTACACCATCTCAACT
GTTTTTAG
Run BLAST on NCBI

transcript from alignment at scaffold_222:352593..367078+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052915 ID=TCONS_00052915|Name=TCONS_00052915|organism=Clytia hemisphaerica|type=transcript|length=14486bp|location=Sequence derived from alignment at scaffold_222:352593..367078+ (Clytia hemisphaerica)
CGCTATCTTACAATCGCTTCTTAGGATTGTAAGCTAATTAGCGAAATCGG
CGCGTcattcttttgatatattttttggtAAAGTGAAAAATTGTATAAAG
ATtcttttaagaagattttttgaacaatATTATCTTTGTGAAGAAGTTTT
ATAGTTTCCATTTTATTCAAATATGATGAAGATTTTTGTATTTCTTTGTA
TGATTGTGTTCATACGCAGTCATCCTTTGAACCATCCAGGGGAAGAGAAT
CCAGCATTTGATTACATCAATGATGCTAATAAAGGTTGGTATACACTTCC
CTTCATTATTCGAACATTCAATTCGAGAATTTCTTTCTATGCTGTACCAA
ATAAAATCCGTTTTTTGAATGCTGtgaagaaaaagttaaaaagcatAACT
GTTCTAGTCATAATTATCAATGAATTCAAAAGTTGAACTTCTTGTGGGTA
GCTGTATTTTTTTGGTAGTGTGTATTGACTAATTAAgtctattttgaatt
ttaaatgatggaattttttccatttagatctcgataaagaaaattttgaa
gaaggtGATATGGTAAAAGTGCAAAATGCTGCTTTGAAAAAAGACTGGGG
TCAATGGCCAAACGGCATCGTTCCTTACGCCATCTCAACTGTTTTTAGTA
AGTACCTTGCATTGATATAAGCATTCCATTGGGTTTAAGTTGAATTGTTA
GTGTCGCCCATAGTATCTTTGTGTAAGCAACGAGTTCACCATCTCAAATA
ATTATAGTAAGTATCAATGGATTAAATAACAAATTGTCGGGATTGCTTTT
TTCTAAATTGCTAACAGCATTTTAATTTTATCATTGTTCTACCAATGCTA
TGTATTTTTCCCCtaaagcataacgtttataaagcATATGCAatctcagt
ttttggtacccaAACAATGGCTCTACACAATTTCTCTCTATTTGCAGAAG
TGGTTTGACACAGGATTTTTGGAACACCCTGTATCTCATGATAATTTAAT
TAACCTGAGTTCTTTCTTCTATATTCAGGTGCAAAGGACAAAAACAAGAT
TCGTGCTTCAGTCAATAAGATCCAAAAAGCAGCTCCTTGTATGAACTTCG
TGGAATATGGATATCGAGCATCAAATGTACCAAAGAATCACGTTGAAGTC
ATCAGAAGTGGAGGGTAGGgtggaaattttattgaataaaattgttttat
attataattgaaaattccaAGTCTCCCCTTCCGATAAAATATGAACTCAT
TTTAAGGACGTGACCACAATATCTTTATATTGCCTGAAAACACCATACCA
GATTTGATTTAGTGTTCTAAGATGTTCTTGCAATACAATATTGAAACCTA
TTATCACTTTTTTAAGTGGAGGGTAGGTAAATTTTATCGAAAGAAATTGT
ttgattcaaaacaaaattcaactCGATACAAAAAATGGAGTAATTTCCAG
AACGCGCCCTCCCACAATAAGAAATTTCTATGGAAAAAAAGTCTCGAAAT
ATCGCACATATTTTGACTTAGTATTTCAGTATTCCTGAAATTCTCTGTTC
AAAGATGTTCTATAAATATACTATTGAGCATACTTTTACTACTTTATCTC
CTAGTTCTTTGTTTATGGTTGGCATTTCTTTTAAAgtggatttgattaaa
aagattCTCCCTTGCATATTTTAAGTCCAGTATCGCATTACATACACTAA
TCCCTTAAACTGTACCGTTTCTTTAGTTGTTGGTCAATGGTTGGTATGAC
AGGTGGTAGACAAAGTCTTTCCATCGGCAATGGATGTATGTGGGAAGGAA
CGATCATTCATGAGTTTCTTCATGCTATTGGATTTTATCATGAACAAAGT
CGGCCTGATCGTGACCAATACGTTAATATCATCACCAGAAATATCGTTGG
AGGTAAAGATTTGATTTCCGCAATACTGGTGTTATTATCCTAATATAACC
TCTCTGATTtccgggacaagctggagtttttacaagctctcgtttgattt
ggttggtcgttaacctgtaataaaacaattttgttactttttctaaagaa
cgcatcatttctattacttcaaataaccaattagtgaagtctcttgtaaa
aactccagcccatCCCTGATTTCCATCACACCCTAATATAAATTGTATCT
GAAAATAATGTGGCCAGTCGATataattttgcgcccctcttatCTACGCT
ACTGATAATTCTCAAATTATATAAACGTCgcgttgaaaaataaaaatcct
gTAATCCAAATTATTAAATTTAACACCTCGCTATGAACTTCTACTTCATT
CATTTGctatatttttatcttttaggTCGTGAGCACAATTTCAAGATTGC
ATCGAGGATCAACAGTCTTGGTGTTGAATACGATCGAGTTTCTGTTATGC
ATTACTCAAAGTAAGATATTGCCAACATTGGTTCTTACGTAACCTTGAAA
AGGtctgtttccaaaaaaaaatggCAGTCCGCTAATTCTGAAACATtatc
gagtttatgtattcgagaacAACCGGAGGCAACAtcgagccgtacatcaa
ctattgACTTTGTTTTGTGTCGATTTCACTTACCTTCGCCCTCGATAACA
TAAACTCCCCTtgtaaaaattcttgataagatctgaaaagatcgttgaag
atctttcaagatctttaacaagtaagaatctttaaaaaatctttgtaaga
tcttacaacgATTCTTAggcaatcttgaaaatttcttccaacaaaaagat
ctttaaagatcttgtaAAGAAATCGTTAAGNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTAAGAATCTTAAAAGCAC
GTAAATTTCTGGTTatgattgtttttcataagaaggaGTCTTTAGACTCA
AGGAGAGCAATCTCTTAGGATAGTATTTACGAAACAGTTTTTGGTCAGCT
TCGAAATACGGTAAgtggtttttttcttttgtgtgtGTGTTATCATTGAC
TGTACTAATGAAATAGTTAATTAATGACGAGATCATCAGTTGAATGCTGT
CACTCGAGCGAAGCTTTCGGCCCTTATTCAATAACTGAACGGGGATAGTA
GTAAAATTCCgtcagcgaccgtagtgcagtggtagagcatccgtctACAg
tgtgcaaggttgtgggttcaacccccggCCGGGTCACACCAAAGATTcct
aaaatggtacttgatgcctctctgcttgatgctcagcaagtAGGTGGAGC
AatccctcccctaccttcaggtagatagctatcgaaagtgGAGCCTGCAG
GTCATCTccgacttacttttacttaaAATTCCGTCAAGATCTTGAATCAC
TGTAAGGGACAAGAATCTTATTCAAAACTTATAAAAGAGTCTTATCAGAT
CgttaaagatcttgaaagatcttgGCACGTTCgtagtaagaaactgaaaa
agaagaagcaaagtttcttgataagatcttttcaagaacttttcaagaat
ttttaccagggtCGCCATTGCTTTAAAAGAGAAGACAGATTTTCTTAAGT
GATTCCTGGATGGTCAGATTAACTAAGGTTGATTAAAGTCTTTTANAAGA
GAAGACAGATTTTCTTAAGTGATTCCTGGATGGTCAGATTAACTAAGGTT
GATCAGAGTCTTTTGGAACATCTTTTTTCTACGAACTTTCGATGGACTCA
CAAATCATTAATCAAACAAAACTTTTTCTTCTTCCAGACGAGCTTTTAGC
AATGGTAATGGAAACACAATCGAATGGAAAGCTAACCCTAAGTTATCACT
TGGTGGAAATAAATTGTCTGAGAAAGATATAATgcaaatcaatttgaaat
actGTAGTGACGTCAAACCTACCACTACAACTACAACAGCCACTACTAAA
AAACCAACGACTACGAAAAAACCAACGACTACCACAAAAACTACAAAAAC
CACAAGAACTAAAAAAACAACGAAGCGCCCGAAAACTACAAAGTCCACCA
AAATGACGACAACGACACAACGGCCTGGAAAAGGttggaaaatcaaatat
ctttcCTAATTTTCATACAAAGATAGTACAAATTTTAAGAATAGTTTATA
GAATAGACGCTAAAAAAGGTAGATTTTTTCGCCTCTAGTGTCAGACCTGG
TGTAGAGTAAAAAACCGCTAAAATGGAAAAAAGCAATTACTCTCgtgtac
ctaatagccgggggatttgaataagcagggggttggaaaaatggTGGGTT
GGAATTagaaatgtcctgggtggaaaacttttttaaaggaGGCTAATACT
GCNtctgtaaacatctccgccactgcttactccacccgaatttatcacgc
ctctcctaaactattcccttttttagtgatcttgtgtagacgataggatc
gtctacagGGTTACCAAATTAATCCTGCCTCCGAAACTATTCCCTATTTT
AGTGATAGTCTACCTCGGGAGTTACTTTGGTATAAAATGGGTTTTGACAA
GTATATGCGAGCTTTAAGGACAGTAAGGATCCCTTTTTAAACCCTCAAAA
GTCTATTAAAGGGGTGCAAGAACCATCACGAATAAGCAATTGAAAGGGAA
CGGAAATATCAAGATCAACTCCCTCAAAGGATAATANGAGAGTATCCTGT
AGGATATCTTTCTTGGAAAACTTTggcaattttgaaataagattTTGTAA
TGCAATCCAATCTAAGGTCACTTTTTCCATAAATCATGATacaaatctca
taaaaaagtctCACGTAGATCAAATCATGACATTGCAATAAACTTGTCTT
TGATACTTTTCAGCATGTGGTGACCGATTGGGAGCTTGCATTGCCGTTCA
GTTCAACAAAGGCTTATGCCGTTCGTATAACTATAAATACTACTGCCCCC
GATCGTGTGGGTCCTGCAAAGGTCCTAAATCTGAAAAATGTATGAATTTG
AAAGATACAAAATATGATTGTCAATCAAGAGCTAAACGCGGAGAATGTCA
ATCTCAACGCAGGAGATATGGATCTGTTCGCTGGAGAATGAAGACTCAAT
GTCCACGTGTCTGCTGCGATCGTGGAGAACTCTACAAACGTCCTCGATAA
AAAAAAGAGACAGTAAAATTAATAATCTAAATTTTGATATACACAAAGAC
AAGGTCTCAATTTTATGCATAATAAAAAACGTGGGTTATCAGATGATTAA
AGTCCAAACAATTTCATCCTTTATTTTTAGGCCTACGTTCTCTGCTCTAG
AAGAAATAGAGGAAAGAGTTTTTCACTTCCACATCTTTTATACCACTTAT
GGTAATTTTTACAGGAATTTTCACTACCTTTTCCAATTTCTTCCTGCATT
TTCAATTAATGAAACAATATCGCAATATATCATTTATAACAAATTAATCG
AAAGCAATGATTGCTTATTGCTTCattaaattatttatttatttatttat
ttacttgatttatCTATTTGCCATTTAAAGTAAACAAACTTACAAATGAT
TAATCTTGGAATTGTCTTGTCTTTCAAACCACCTTCTACCTCCTTCTTTC
AGCAGGGTtactagacgatgttatcgtccgttacagtgataataaaggcg
ggaaaaatggctgtatggcgttatggcggtatacgaaAAAAAACGGCGGG
AGAGTTTCNgttaaaactcagagttaaaactctacccttcgaacctactt
tagagcacatacaaatcgattgtggtttcaaaacaccccggtgaatttcc
cttttgtgccaagtattttgtcactgattgtagattcCCTCTTGTTGATT
GACGTCACAGAATCGCTCACTTATGATTAAATACGTGATAAACGATCACG
GTTGCAATAACATTCGAGTTGTTGACAAACGCCATAATTGGTCTGTTCTT
TTGTTTAAAGGGGCATTGGCAATCAAAGATTTAAATAGCAAATCGCAAAT
AGCATTAACTATCTAGATTCCCTCTTGTTGATGATTGACGTCACAGAATC
GCTCACTGAAGATGAAATACTTGATAAACGATCACGTTTGCAATAACATT
CGAGTTGTTGACAAACGCcataatacacctttcctgagtttttttcgact
ttttgaaaaacactgttCCAAAACCCTGCTCTACtttttatcgaccgccg
gaggcggtttctttcatagtggtacgctaatctcgttttgccttggctca
ttactttgtctaccatttactttcgggtTTTTNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtcgagacatgaaaaatg
actatattgtaatctgttttcaatgaataatctaaaatgtactggagatg
acatgtaggcgttaataatgtgcgcgcactctctcgcgagcgtgatgcgt
gatggaaggcggtcgtttcagtgtggtttagatccacactgtgacctagt
taatttcgcctagcgaaagtattacgatagcctttcgcggcggcggtgta
ataaaaaatttacaaaacgaaagtactcgatacggtggacaaactcacta
aattcaatttacaaattacacgctcgtataaccacggacgattttcgggc
gttttctttggattacgtcatatagcTTTGtttctttagcttcacagttt
ggattttttctttattttcttataagcatatactttataagaatcaaatc
aataactcttgataaacggtgatatacccttcgataattagttcttacaa
agtaaataaggaatggtgcacaatatgagaatatctatttttcttataag
catatactttataagaatcaaatcaataactctcgatagaaggtgatata
gccttcggtaattagttcttacaaagtaaagtaaacaagggatggcgcac
aatatgagcatatttatttttcttataagcatatactttataagaatcaa
atcgataactcttgataaacgatgatatagccttcggtaattagttctta
caaagtaaacaagagatggcaggcaatatgagcatattcatttttttata
agcatatactttataagaatcaaatcgataactcttgatagacagtgata
taccgttcagtaattagttcttgcaaagtaaacaagggatggNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNtaaacaagagatggcgggcaatatgagcatatttatttttctt
ataagcatatattttataagaatcaaatcaataactcttgatagacggtg
ataaaCCCTTcgataattagttcttacaaagtaaacatgggatggcgcgc
aatataaacatatttatttttcttataagcatacactttataagaatcaa
ctcaataactcttgatagacggtgatatacccttcggtaattagttctta
caaagtaaacaagagatggcgggcaatatgagcatatttatttttcttat
aagcatatattttataagaatcaactcaataactcttgatagacggtgat
atacccttcggtaattagttcttacaaagtaatcaagggatggcgcgcaa
tatgaacatttttaccttatcggggaaaacttcgtcggggaaaaatgtTC
GTAACTTGCTGTTCTTAAGAATTAAGCAACCATTGTTCGTAAATTGATCT
TATCTTTTTAGCGactttgagcctcgttgttcatataaaattgtttcatc
aaggctcgatgtaaagtagacttcagattagcttccatctctacttcttg
ttttttcccatgcagtttgaactttaggcgaaattttcgacttcaagtcg
tcttgtttaatTTAGAAAGATTCTACTACGaaatacaaaatcaacaaaaa
aagaattatgttAAAAGCTCTTCCggttcttgagatatttcaattttaaa
gtttttccttAAACAAAAGTATCCCATGGAAACGGCATAGAAACGAGGCC
CGGTAggataaaatatcttttaagaGAGGTTTGactgtaaaaaaaaaagg
aattaaaacagccataaaaaaggaacggaaaaagcttttgatctcaaatt
ttcagaatgaCTTTGTATcaccaaaagtttcaaaagtaTCAAGTTCTCGT
TTCAAACTAGAGAGGTCGgaaaaaaatcgataaacttgggaaaggtgtat
tggtcTGTTCTTTTGTTTAAAGAGGCATTGGCAATTAAAGATAAAAAACC
AGAAATGAACAGGGAAATGGACTCGGGTTTGAAAGCCTCTAGAGACTTGA
ATTTGTTCCGCTAAaaaaagtctgtctcgaaataatttgcagctggagaa
ataaatagctgtaacttttgatagaattcgaatcaagttacggttttgtg
ctcgttaaaaagatattNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNtttttaacgagcacaaaaccgcaact
tgattcgaattctatcaaaagttacagccatttttttctccagctgcaaa
ttatttcgagacagactttagttaatttttgatttttttaaaaaatttgt
tcaacaTTTTCAGTATTACTATCACTCTGACGATGCTTTTGTTGTGAAGC
AAAATattagcttttcaaaaaatgaaaattttgttgtttgtgatctGACT
CCACATTGATTCatggcaaaatcaattttcgtattaagttttatcttgtt
tttactgaagctgtcatatggtcaaaatttttggataaataaagtttaaa
aacttTGGCTGGACATCGGGAAAAATGTTATCTCGAAGGGTATCGATTTT
CGCACTTTGATTTGGTTACCACCTAATCAcatcgcaaacctagtaccagC
CTCCTCCGAGGCTGATGACTGAGCATTATTTGAACAGTAAATTCAATGAA
CCTAAAATCTGCCAAAAAGTATCAAATTTAAGACTCACCCTGTAGTAAGG
AAGACGGCGAATTAAGTGTGTCTTTTTTCCAAATAcatacatccccttct
cacagacccggtaggattttctCATCCAGTAGGGATGAAAATAGTGGACT
GAAACTCgacggggattgatattcccatattttttatggctggggatttc
ataatattcaatatcataatattttgcagtgaggattggtttatttgatt
attttcagtggggacaaaaactgGAGGATAATCTCTAaccggggacaata
ttttggacaattttactAGTGGGAAGGGTTCTCTCTCAGTGGGTATGAGG
GGGTGTATAAATGTTTGTGAACATTAGATTGGTGgtgaaagaacgttgtg
tgctagctgggtgACTAACGGATTAACcaattaaagattttgtttgattt
ttggtGAAGGTCAGCTATATCACAACCTTTTATCAAAGGCCTTGTTTGAC
CCATAGATctataaagcccaaagggcttgATGGCGTACTTTTTGCTGAGA
AGTGTgtcgtggttaggtaggaaaccCTACTAAAGTCACCATAATAAATA
GCAATAAATTGCataaaacaatagcaacaatattttttccgatattcact
tttttttgcctgcgatggcttaaagcacgacatctagcccttcgagcttt
atagagaagaattttgaatttctcaTTCATTAAAATGGGTCGGCGGGAAT
GTTCTGTAGCCAATGGAACAGAATCATAAAGGTCACAAAGGTATTGTTAT
TACCTGGAGCTTTCATTAGAGTATTCTCCCCTTGTTAAAGTATCTAATAT
GTCACATACCCATTAAAACCTCAGTCCCACtgttggaaaatttggcaaaa
aatctCGTCCCCGTTGGGAAAAATaccttagaatttcagccccactggta
aatttactttgatttcatcccccattcgaaatgtttaaaaattgcacttc
aaagcCTTCCCCACTGGATCTTTTTATCTTGGAACAATTTACCCCCATTG
TAGGAAAAATTTTAACGgaactgtgagacagggatgtcttCGTTGGGTAA
TCATACTGGTATTCTTAGCGAGGCTACTCTTATAATAAGGTCGCAAATAA
GATTAAGTGGAATGATATCAACTTCATCCTGCCAAAGTCtactaaaattt
ggaaaaatgacAAACTATCGTACTTTGTATTACATCTGACCGACGGTAAA
ATATAACGTCATTATTACGACAATAAGACGCACTGACTTTCCAAAATCAC
GGCACGTATCTCCGCCTTTGAAGATTCTCCAATACgcaaaatattgtttc
aatttttctggTTATTAGATGTCAAGTTTGGTATATAAAGTGTAATGGAT
TTGGTTTGAAAATCAGAACGCTATCttaccatcatcatcatcattgctcg
accTCAGTCgagacaaaaaaagaaaaagaaagaaaaaaagacgtTATCTT
ACAATCACTCCTTAGGATTGTGTAATAAGTACCCTTCTtgttacacactt
ttttttataagaatacactttataacaatgtccatgatgaaaatggtcaa
aaaattaagaatatgctaagaatatcaccatcatggaattttgctattca
agctaagaatgccatttttaaagcatttttgattataaatagtcaattac
ccccaagtaaggctcgcTGCTCAAAGCTTCTGCTTTCCTTCCAATTCCAA
TTGTTGACTCTTTGCGACATGTGCTTCTTGTTGCACGTCCAATTCAGATC
TGCTTCTTTTAGATTTTCTTCGCTATTTAAACTTTTCTGATATTTGATAA
TTCGTTAATTTTCGAAACGTTTTGGTCACGTTTTTTGCAGGGGAAGGTAC
TTTTTCTTTCTGAAGGTAAATTCCTGAAGAGATCACGTTTCTTGCAGGGA
AAGTACTTACTTTGTGAAGGTAAATTCCTGAAGGAATTATTGATCAAGTC
CGAAACGTTTTGGCTACGTTTTTGCTACGTTTTTGCTGGAAAAGTACTTT
TCTTTGTGAAGGTAAATTCCTGAAGGAATGTTTAAATATCTGAAGGATTT
GTTTGATCAAAAGTCGGAAACGATTTGGTTGCGTTTTCTCTAGGTTTTTC
TTAATAGAAAGAATTTCAATTGTAAGCTTATAAGCGAAATCGGCGTGCCA
TTCTTTTGGTATAATTTTTGGTGAAGTGAAAAATTGTATAAAGAttcttt
taaccctttaagtgccgatgtcgtatatatacgacatgggctatatagga
gggcgaagccctcctgtaatgcccagtttgagttagaaatcgNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNc
ttctaattccttctagatcaggagatataagcccttaaagtttgaactag
cgattttttaaaaaaaacttagaaaaaaggaccctggcactcaaagggtt
aagaagattttttgaacaatatatcttttgtgaagaaattttatagTTTT
CACTTTATTCAAATATGATGAAGATTTTTGTATTTCTTTGTATGATTGTG
TTCATACGCAGTCATCCTTTGAACCATCCAGGGGAAGAGAACCCAGCATT
TGACTACATCAATGATGCTGATAAAGGTTGGTATACACTTCTTTCGTTAT
TCGAGCATTCAATTCGAGAATTTTTTTCCTATACAGtatcaattattttg
atgatgcAAATTGActaatttagtctattttgaacGTTATTTATGACTTT
TTCTACATTTAGATCTCGATAAAGAACATTTCGAAGAAGGCGATATTGTC
AAAGTGCAAAATCGTGCTGCTTTGAAAAAGGACCGGGGTCAATGGCCGAA
AGGCATTGTTCCTTACACCATCTCAACTGTTTTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033432XLOC_033432Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052915-exon-scaffold_222-1491911889:352593..352876TCONS_00052915-exon-scaffold_222-1491911889:352593..352876Clytia hemisphaericaexon
TCONS_00052915-exon-scaffold_222-1510915933:352593..352876TCONS_00052915-exon-scaffold_222-1510915933:352593..352876Clytia hemisphaericaexon
TCONS_00052915-exon-scaffold_222-1575043694:352593..352876TCONS_00052915-exon-scaffold_222-1575043694:352593..352876Clytia hemisphaericaexon
TCONS_00052915-exon-scaffold_222-1491911889:366955..367078TCONS_00052915-exon-scaffold_222-1491911889:366955..367078Clytia hemisphaericaexon
TCONS_00052915-exon-scaffold_222-1510915933:366955..367078TCONS_00052915-exon-scaffold_222-1510915933:366955..367078Clytia hemisphaericaexon
TCONS_00052915-exon-scaffold_222-1575043694:366955..367078TCONS_00052915-exon-scaffold_222-1575043694:366955..367078Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:352593..367078 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0.621184	0	6.61132	3.52131	3.35628	57.99	1.54134	0.0553876	0.787386	0.380025	0	0	0.504752	0	1.0679	0.401717	0	0	1.54107	0.90563
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052915 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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