TCONS_00052910 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052910
Unique NameTCONS_00052910
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2298

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052910 ID=TCONS_00052910|Name=TCONS_00052910|organism=Clytia hemisphaerica|type=transcript|length=2298bp
GGAAAATTATCAGAAAAATAGACTTGTTTGTAGAGCAAGATATGTTTTTG
TGCCCGAGATCCAAAATGTAACCTTGGTAATAACTTTGAGTAAGATCTCA
ATAGAGGTGAAAGAAGCAGTTATTGAAACGGTGAAAATAGTGAAAAACAG
AAGCTGAAAAGGAAGAAACCTGGATGCTGGCAGCTGGTCAGCTGAAGAAA
CATCAAAGCAGAACGCTGACAGTCTGGTGGTTAATTGGAAAAGATAAGTC
GCTCATCTCTAGTTGTGCGaacaaatgaaatgaaatactTTCCTTCAAAT
AAAAGAAGTTCAAGCTTCTGCATACATCGATACAAATGGTCAATAAATTT
GGGAAAGCCAAATGGCGAGATAAATACTACAAAGTCAAAGGTCGAAAGTA
ATGAGAAGTTGTAAAAAAGACTTTATGAGATGGGGTATTCTTCCTGGATT
CTGTTTCTTCATATTCATGATTTGGATTATGTACTTTTTTCTTATGCCAG
AGGGCAATTATGTTCAAGGAATTTACTACTTCTTGGAAAACTCATCAAAA
CCAGTTGTGATACCCGACCTAAAAACTACATTGAATACACATACGACATC
ATTTTCGACCACCCCAACTACACCAACAACAATCTTTGCAGCCAAAAGTA
CAACCACTCCAACCATCACAAAGACGACTACTCCAACGACAACAACCACC
ACtccaactacaacaacgaccattCCGAGCACAACAACAACCACTCCAAC
CACGACAACCACCACTCCGACCACAACAACCACCACACCAACCACAACAA
CCACCACTCCCATCACAACAACCACCACTCCCTTCACAACAACCACCACA
CCAACCACAACAACCACCACTCCGACCACCACTCCgaccacaacaacaac
cactccgaccacaacaacaaccactccaactacaacaaccaccactccca
ccacaacaacaacaacaacgaccaccccaactaccacaacgaccactcca
atcacaacaacgaccaccccaacTACCACAACGACCACTCCAACCACAAC
GACTACCACTTCAACCACAACAACCACCACTCCAACCACAACAGCTGGAA
TATCGCCTACTTGTCAAAATTGGGTCAAGGGTGAGAGGCACTGGACAGCA
GTCCTCAACACTAAACTTCAGACTTTTATGTTCTATGATAGGAAAAAAGA
TACGTGTTATACTTTGTGTTTGGGAATTATACAACAAGGACCTTATATTG
GATTAATTACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACTTCATAT
GTTGATTATTCTCACAGTAATAATGATATATGTTTCTTCTAATCATGTTA
GAAGGAGATGTCGAGATAGATTTTGCATTACATTTTTAATTATCATTGCG
TACCGCCGCTTAGTAAAATCTCTGAAAGAAGATACCTtacataaaagaag
aaatttagcgaaagtttaaaatttgatgtgTTTTCAAGAAATTCTGGTAC
AAAAATTTTGTAAGAAAAGGCAtattttaaggcctgaaatactgaaatat
tttaagaaatattttaaaaaagttggaaatacacattttttataagcaac
acCATTTTTTGGTATAGGGCTTAGAGGTGCTAAGGAATTTAACGGATTTC
ACCTATAAATTGCATATggattttgagccaaaaaaactTAGCTCTAGTTA
AGACGGCCCACTATTCGcactgcctattctaattgtggaTTAAAGTTGGC
AgaaagttggctgtctaaagtcaatgcattgccatCTTTTGACGTCTTTT
GACGTCTTTTgatgtcttctttcaatcttttccaagcaaaggtTTTAACT
TCCAACTTTGTGCCTActtactctaacaattagaataggctgGGCAGAAA
GTTGagcgtctaaactagagcttagcaAATTCAACATTGGTATGCACATA
CTATAATGTCGAAAAGAGCTCATTTTTAGGTAATTTTGGTTGCTTTCCCG
GTTCATGCTCAGTTTTAGGGCTAGGCtgctaagctctagtttagacggcc
cactttttgcctTGCTTATTCTTATTGTAAATCACATTGATCATAAAGTT
TGCTGtttaaagtcaatgcattgccctcttttgacgtcaaagcaatgtct
ttttaagattaatactcaaaataaaaaattaagaatatccgaagTTTTTG
attgatcaaagattttggatgttcttataaaaaaacgtgtatttcgtCCA
GTTTTATCTGAACCGTCAATGGCTTTTAAGTACGAACCGTTTCCTTTG
Run BLAST on NCBI

transcript from alignment at scaffold_222:294511..305503+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052910 ID=TCONS_00052910|Name=TCONS_00052910|organism=Clytia hemisphaerica|type=transcript|length=10993bp|location=Sequence derived from alignment at scaffold_222:294511..305503+ (Clytia hemisphaerica)
GGAAAATTATCAGAAAAATAGACTTGTTTGTAGAGCAAGATATGTTTTTG TGCCCGAGATCCAAAATGTAACCTTGGTAATAACTTTGAGTAAGATCTCA ATAGAGGTGAAAGAAGCAGTTATTGAAACGGTGAAAATAGTGAAAAACAG AAGCTGAAAAGGAAGAAACCTGGATGCTGGCAGCTGGTCAGCTGAAGAAA CATCAAAGCAGAACGCTGACAGTCTGGTGGTTAATTGGAAAAGATAAGTC GCTCATCTCTAGTTGTGCGaacaaatgaaatgaaatactTTCCTTCAAAT AAAAGAAGTTCAAGCTTCTGCATACATCGATACAAATGGTCAATAAATTT GGGAAAGCCAAATGGCGAGATAAATACTACAAAGTCAAAGGTCGAAAGTA ATGAGAAGTTGTAAAAAAGACTTTATGAGATGGGGTATTCTTCCTGGATT CTGTTTCTTCATATTCATGATTTGGATTATGTACTTTTTTCTTATGCCAG AGGtaaaacattttatttcatattttcactTCCTTGTAttcagacgatct caatcgaacgaaatcgacgatcgaaccagtcgaaccaaatcgaacgcaat cgaccaattgaaattcgattgtcgaacgcaatcgaatctcaatcgaacgt caaaattctgagtaatattcgattggttcgattgttgttcgacNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNa tcatgcatattgtaataattatgcatggttttatcattgtttttctgctg gactacataattattcaacagggtggcctctttgaaaaaaggtctattcg atTGTCGTTCGACTGCGTTCGATTGCGGTTTAATCATCTTTCGACTGCGT TTGATTGCTCTATGCTCTAAAGAAGGCCGATTTTCCATCGTAAATCAAAG AAGAGAAGAGTGTTTGATGCCCTCTGATGTCCTGGAAACATACAATCCAC CACTTTCGTCATACTTTCTCGACCATATGGAAAGGATATATATGATTCGT CACGTGACCTTATTCGGCAATTTGTCCTTTGGTCCTTCCGCCCTTATGAT AACTCTTGCTTTTCTTATCCCACCCTTACTAGCTTCGGACCAAATCCTTA GGTCACGGTTCAAAACTTCATGTTTTCCCGTGCAAAAAAAAGAAGCGCTT CAATGTTAGCAAAGCAATGCCAATAAGAACGAGAACCATGACGCAACCAC CAGCACcgcgcaatcgaacgcaatcaaatctcaatcgaacgcaatcgaat atcaattgaatctgaaaattgcggtaatattcgattgagatttgattgca ttcgacaatcgaatttcaatcagtcgattgcgttcgatttggttagactg gttcgatcgtcggttccgtttgattgagatcgtctggttgtATAAAATGC CAACATATATACCTTGCTTTAGTCGTATGGGAGAGGgagacagtcttttg aataaatAATTACACCAGcagaaattttgttaaaataatAACGTCATAAA TTGATCTGTCTTTTACAACACAACTGTTACCTAGGTAAGATAATTTATCC GCATTTGTACTAGAAGTGTAATTTATTATTCAATAGAAGTCTGCaaagta ccgtaagttggtctaatgtcgacatctcCCTTCTAAGCAGTTAGTGCATA GTGGAAGTACTTCGATTTGTGAAGCGTCTTTAGTtacatagaacaaaaga aaagaacaaaagaataaaggaattacccatagtCACCATTTGGCAACCAT GGGGAATTGTCTCTACAATATAGAAATCCTGAAATAAGCGCCctgctcga ataagcgcccccctttgAATAAGCACCCCCCTCCAGgaaggggcgcttat tcgaattgGTGGCCTAGGCTAATTTCCGGGATAAGAATTTCTCTTCGGAT GATTAACAGTCGAAaaatttggaacaaaaataaaaatcaaggtcttttag ctttcttttttttctgtttctttttcttcagattcatttttcacttttac aaagcaaatttttcttttattcatccttttgtgaaaaatcaaccctttga aacagttaagtttaagcagattccaaatttgttgatatacgaatttctga aataaagaaataagcgcccgctcgaataagcgcctcGCTTGAATGAGCGC CGCccttagagcctgaaaaattaaataagcgctCGGGCGCTTATTCAAGG ATTTACGGTATGTACAAAAATTacctgttttctccttgaagCTTGAatta tgtttcttttatattctgCAATTGCAATAATACCAAATAATACCAATGCA TCANTTGAattatgtttcttttatattctgCAATTGCAATAATACCAAAT AATACCATGCATCGACACTTAACACTCTCCAACTTTTAACTGCACTGTTC AAAagagataacataacccccatttttagtaaaaatttggagcttgtttc cactgccaattatatccgGATGCACTTTAGTTACAAAGTTTGTGAAAAAA CTTCTGTTGGTTGTTTTGAATAAGTATCACCCTTGTGATCACAAATCTTC AGCTGGACAGTTTGAAATTATGTCATGTTTTTTATGTCGTCACAAGCAAA ACATTGAAAGAAAATATGGACATATTATACATCAATTAACGCGATTCTCG ATActgtaaagtaaaaaaaaaaaaaaagaactcaCTTGCTTTcgttttga agcaaaaaacagtgcggttttgattgttttggttgCGTAGCCAAGTTATT GTAACATTTGCCACATTCCTTTAGAGCAAAGCATGTTGCATGGATGTTCT GTTATGAGACCACTCTCCCACTATGTTATGAGACTCTCCCACTCAATACG ACCCTGGTCGCCAGCACTGTACAGTTATATCCAATGGATGGATTTGAGTG TCTGTGGGATTTTGGGGCTAGGTTACTGAATTACtgatagacaaaatatt ttttttccctCTGACCTTTGATCAaataaataccttaagggaagaagttt aagcggaaagaaaatttgaaatttcctgccaaatttaaattattgtaTTC ATCTACTCCCAAATGTGGGTTATTTCAGGCCTGAAAGAACaaggtttttt cttatttaataAGGTTCTTTTTGGCCAAAGATATCCTTCATCTGCTACAA TTAAATTCcagccaaatttaatttttcaagacaTCCACCAAATGAAATtc cttcagaaaaaaattttttttaccatctaccaaattaaattctcgccaac ATTTCTTCTGTTAAGTTAGTATGCAGTATGCAGTGCCGTTGAGTCTCAAC AAGGACAAAATGcttgctgctctgccacccaatcTCCTAAAAAGAAGATA GTTGGGCATGTGTTATATTCTTCATCAGTAATTCCGATCTTGGTATTATC ACCAGTTCTAATAAAGAAGGGTGTTAAAATTGGATGTGGCATGTCGACAT ATATGACTAACTTATGGTACAATCGATAACTTTttccaatagacgatatc ggctttccgaattctccccgaatgattacccatgatgcattgcgcaaaaa tttcacggaaagtcaatatcgtccgtgaatttttttgcgcaatgcatcat gggtaatcattcggggagaattcggaaagccgatatagTCTATTGATGAC CAATTGAAAAGCTTGCAACATTTTCTCTTCTCGAAAAAAGACATTTAATG TCATCAAACAAGAAATTTGCAAAAGCCGTGATTCAACAATGCCATAGCCT TATGATGAAGCAGCCGGCGAATTGATAACCAATTGATGAATCGGATATTT TAATCTATTAAACATTAGATAATCAGGATTTAAAGGGATTGATAGGCCTG ATTACCTGGCCTATCAATTTATTATCGATTGGTTCCAAGATGATTGTTTG ATCAAAAATTGATAGGCAATTGATGAAAAATACCAATcgatatatacttt tgataatCAAAACAATCAATATCCAGTccatcgattcgtcatcgattaga aaaagttattgattgtatcgAGTAGGGGAGTTTAGAAAACGGTGACCTTT CGAAGGACACTATGTCACGTTGAATATGATTAAAAACTCTGTTGACTCTG CAAAGAcaattactatatatatttATTAAAGTAAGCAACAAAACATATTT ATGGGTAAtgcatgaattttgaaaaattaagtgCGATGGGTTAGTTTTAG GTCTGCTTTCGAGAGGCTCTTGAGGGCTTTAcacattgatttttcaaaag ggATAATCATTTTTTCCTGTTTTATGTGAAGCATCTTAGAATTCTTTGGA CTCACCCTAAAGTcttagttttatttttgattaaaaagaaCCAACTCGCA TTCGTTAAATGTAGGGCAATTATGTTCAAGGAATTTACTACTTCTTGGAA AACTCATCAAAACCAGTTGTGATACCCGACCTAAAAACTACATTGAATAC ACATACGACATCATTTTCGACCACCCCAACTACACCAACAACAATCTTTG CAGCCAAAAGTACAACCACTCCAACCATCACAAAGACGACTACTCCAACG ACAACAACCACCACtccaactacaacaacgaccattCCGAGCACAACAAC AACCACTCCAACCACGACAACCACCACTCCGACCACAACAACCACCACAC CAACCACAACAACCACCACTCCCATCACAACAACCACCACTCCCTTCACA ACAACCACCACACCAACCACAACAACCACCACTCCGACCACCACTCCgac cacaacaacaaccactccgaccacaacaacaaccactccaactacaacaa ccaccactcccaccacaacaacaacaacaacgaccaccccaactaccaca acgaccactccaatcacaacaacgaccaccccaacTACCACAACGACCAC TCCAACCACAACGACTACCACTTCAACCACAACAACCACCACTCCAACCA CAACAGCTGGAATATCGCCTAGTAAGTAATAAGATTTCAATATTCTCAAG AGTCTTACAAGTTAGATTTCTACGCTTATTTCTTCTATGTTGAAAGCTAA GCCCTGATGTAAGTTTTAGTTTGTAAAATCatgatatttttattaattta ggttttttgccaaaaatgttgaaatttattCGATGCATAAATCAAGTGAT GTTTTTTAAATCATAAGAATTTTACTTCATAAAAGGATTTGCCTGTTTTC TTTGGgacacttttttttaattctataaTTGCAATGGCTAgaattaacat tttttttcttccttctaGCTTGTCAAAATTGGGTCAAGGGTGAGAGGCAC TGGACAGCAGTCCTCAACACTAAACTTCAGACTTTTATGTTCTATGATAG GAAAAAAGATACATGTTATAGTTTGTGTTTGGGAGTTGTACAACAAGGAT ACATTGGATGTATTACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACT TCATATATTGATTATTCTATGGGTAATACTATGGATGTTTGTTTCTTCTA ATCATGTTAGAAGGAGATGTCGAGATAGATTTTGCATTACATTTTCAATT ATCTTCAATCTTCAATCATTTTATACCGCCGCTTTGTAAAAGCTCTGAAA GAAGATACCTTacataaaggaagaaattttggcgaaaattttttatttga gttttCCTTATTTTAGACAAGCAAAACGCATGTTTGAAGGTCAAATGCAT GTGGTCGAGGTGAATGAAAAGGTTAAATTTAAGGAATGCTGGAAATGAAT TTAATTTAGTTGATATTTATTTTGACGATGGATTtcgaacaaaaataaat tacggtgggaacttaatttggcaagCTATTGCCAAATTCaccaaagtttt tcttttccgcTCGTTCAATGcgttttaaagggacataaaagtactgacga aatttgtaaacaaactgtatgcagcgagatacaaaatcaaaacaaatatg gctgattttgattgtttcaaatgttttacaagtttgttttggacacgtga ttataattgttctctttaatgacacgtggttcgcgcaatgtttacatttt actactctTATGTCCCTTCAAAGGCTCAGCTCTGCTTTATTTGTAAAATC TTGGGTATATATTTCCATTTTCTATTCCCTATAGGCTATGGACATTAATT TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccgtttattt ggcacccaAGAGTAAATATTAATTTGAAAGTGATTTGCAAGTGATAGTGT CTCTATATGTATCTAACTTTCAGGggacgaaaatttttttttactttttt ccctTGTTAATTCACTACAAAACCCCTTATTTACATGACACATACTATTG CATTTCGTGTATCTTGGATTATCTAAACGAACATTTAAAAAccacttttg aaatattttttccaatttttctttatatCCCAGATAAAGCAATGGTTTTA GTATCTTTAGAAATGTAttttaaatatctttcaaaaaagtatttcgATCT ATgctctattttatttttgaagtgGTTAGGAGTTCATATATTTTATACAT TTGGTATATTGGCTAATTTTGAACGTATTACACGTAAAGCTTTTATGgta atatgtaatagttatcgaaCAGTTGcgaatatgagaaatattttacgagt tccgagatttttccgtaggaaaatatacggaaaatccggaacgagtgaaa tatttccatattgtacgagcataTTACCATAAAAGCTTTACGTTCAATAC GTTCAAAATTAGCAAATAtaattgtttcaacgttcatctaacgttatatg gacgttatgaacgttagatgtttttatttcatcattttttcacCTAAGAA ATTCAGTTTTTACTGGTTCTTAGAGTCCAtaaggcttaaaatgttcttaa tttgtttttaatgttttggaATGTTTATTTATATTGTTTgttattcttaa aaaattgtaCAATGATTTATAAGATTTAGCTACCTAGAAATTTTAACCCT tagctttttgtttttataagagccaGTAAAATTTATAATATATTGGTGAT TTAATGTAAAGGTTAAATTATATTTTAACTTTATTTCGCTCCGCACGCCC TAACCCCTTCTTAACCAGCATCATCTGAGCAAATCACGCCATATTAGAAG GCGCCGTTCGGCACTTTCTACGATTTGACAAATTCCTAGCTTCCATTGTT CTCGGATAAAAAGAGCCTCTAACCTTCTTTCTGTAATTTGAGCTGTGCAA AATCTAGCCCTACAATTCATATAAAAAGGTTGCAGGATTCTATCTGGATA TTTATTGTTTATATAAAGGGACAATTttatccaaaatatttcttgtttaG TTAGCCAAGAGTCATgccaaaataatgaaatatgaATCTCAATTTATTAC CCCTCCGTGCCTATGAAAGTACAATTTAAAAtcacggtttaaacgatata tttgacattgaaaattaatttgtaCTATAAATATCATTTTTATGACACCT CTAAAATAATGTCATAATGTTCAAAGGTGTgaaaagtttagaacatttcT ATTTCAAGAGATTTTAAAACTCCCCCTCCCCCTCAATGCGAATAAGACTA CACTcagaattttaaaatctaattaACATCCGTCAATTGTAGGGCAATTA TGTTCAAGGAATTTATTACTTATGGAAAACCCCATCAAAAGCGGTTATAA CTGCAGACCTCGAAACGACATTGGATACACGCACAACTTCATTTACGACC AGCCCAAATGCACCAACGACTATTACAACAATAATAGCAACCACTCCAAC CCCAACCCCAACCACGACAACGACTACtacaaccacaacaacaacccccc caaccacaacaacgaccaccccgaCCACAACAACCACCACTcccaccaca acaacaacaactccaACCACATCAACGACCACCCCTACCACAACAACCAC CACGCCAACCACAACAACGACTACCCCAACCACTACaaccacaacaacga ccacgccaaccacaacaacgactaccccaaccacaacaacgactacccca accacaacaacgaccacgccaactacaacaacaaccacgcctaccacaac aacgaccacgccaaccacaacaacgactatcccaaccacaacaacaacta caacaacgaccacgccaaccacaacaacgactaccccaaccacaacaaca actacaacaacgaccacgccaactacaacaacaaccacgcctaccacaac aacgaccacgccaaccacaacaacgaccacgccaaccacaacaacgacta ccccaaccacaacaacaactacaacaacgaccacgccaaccacaacaacg actaccccaaccacaacaacaactacaacaacgaccacgccaaccacaac aacgactaccccaaccacaacaacaactacaacaacgaccacgccaacca caacaacgactaccccaaccacaacaacaactacaacaacgaccactccc aCCACCACAACGACCACgccaactacaacaacgaccactccaaccacaac aacgaccactcccaccacaacaacgaccactcccaccacaacaacgacca ctccaaccacaacaacgaccacgACAACTACAACAACTACAACGACTACC CCAACCACAACAACGACTACAGCTGCAATATCGCCTAGTAAGTATAAACA TATGATATTTCAAGAGCTTTAGACTTTAGAAACTGTAACCTTTTGGTTCA CGATCGATAAAAAATATAACTGTAGCAGTCTCCATTTTtaagacaatttt tttctaaataaaatctattttgatatctttttattcTAATGCACTATAAT AAGAATGACAGTCAAAAGGTCAAACACCCCATGAGGCAAAAAAGAACACA AGCAAGAAACCAACCTATGCAAGGGTGATGTTGTAtcagaatttttcttt tcctatttGGACCGCCTTAACCGGGTTATAAGATGCTATAAGATGCTCCA ACTAACTTATTCTAACAACGACCACGacatttaactttcttttctctttt ctagCTTGTCGAAAATGGCTCAAGGGTGGGAGGCACTGGACAGTACTCCT CCGCAATGAACCTCAGACTTTTATGTACTATACTTGGAGAATAGAAACGT GTTATACTTTGTGTTTGGGAATTATACAACAAGGACCTTATATTGGATTA ATTACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACTTCATATGTTGA TTATTCTCACAGTAATAATGATATATGTTTCTTCTAATCATGTTAGAAGG AGATGTCGAGATAGATTTTGCATTACATTTTTAATTATCATTGCGTACCG CCGCTTAGTAAAATCTCTGAAAGAAGATACCTtacataaaagaagaaatt tagcgaaagtttaaaatttgatgtgTTTTCAAGAAATTCTGGTACAAAAA TTTTGTAAGAAAAGGCAtattttaaggcctgaaatactgaaatattttaa gaaatattttaaaaaagttggaaatacacattttttataagcaacacCAT TTTTTGGTATAGGGCTTAGAGGTGCTAAGGAATTTAACGGATTTCACCTA TAAATTGCATATggattttgagccaaaaaaactTAGCTCTAGTTAAGACG GCCCACTATTCGcactgcctattctaattgtggaTTAAAGTTGGCAgaaa gttggctgtctaaagtcaatgcattgccatCTTTTGACGTCTTTTGACGT CTTTTgatgtcttctttcaatcttttccaagcaaaggtTTTAACTTCCAA CTTTGTGCCTActtactctaacaattagaataggctgGGCAGAAAGTTGa gcgtctaaactagagcttagcaAATTCAACATTGGTATGCACATACTATA ATGTCGAAAAGAGCTCATTTTTAGGTAATTTTGGTTGCTTTCCCGGTTCA TGCTCAGTTTTAGGGCTAGGCtgctaagctctagtttagacggcccactt tttgcctTGCTTATTCTTATTGTAAATCACATTGATCATAAAGTTTGCTG tttaaagtcaatgcattgccctcttttgacgtcaaagcaatgtcttttta agattaatactcaaaataaaaaattaagaatatccgaagTTTTTGattga tcaaagattttggatgttcttataaaaaaacgtgtatttcgtCCAGTTTT ATCTGAACCGTCAATGGCTTTTAAGTACGAACCGTTTCCTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033429XLOC_033429Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052910-exon-scaffold_222-1491911889:294511..295012TCONS_00052910-exon-scaffold_222-1491911889:294511..295012Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1510915933:294511..295012TCONS_00052910-exon-scaffold_222-1510915933:294511..295012Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1575043694:294511..295012TCONS_00052910-exon-scaffold_222-1575043694:294511..295012Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1491911889:299075..299681TCONS_00052910-exon-scaffold_222-1491911889:299075..299681Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1510915933:299075..299681TCONS_00052910-exon-scaffold_222-1510915933:299075..299681Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1575043694:299075..299681TCONS_00052910-exon-scaffold_222-1575043694:299075..299681Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1491911889:299979..300072TCONS_00052910-exon-scaffold_222-1491911889:299979..300072Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1510915933:299979..300072TCONS_00052910-exon-scaffold_222-1510915933:299979..300072Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1575043694:299979..300072TCONS_00052910-exon-scaffold_222-1575043694:299979..300072Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1491911889:304409..305503TCONS_00052910-exon-scaffold_222-1491911889:304409..305503Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1510915933:304409..305503TCONS_00052910-exon-scaffold_222-1510915933:304409..305503Clytia hemisphaericaexon
TCONS_00052910-exon-scaffold_222-1575043694:304409..305503TCONS_00052910-exon-scaffold_222-1575043694:304409..305503Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_222supercontigscaffold_222:294511..305503 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.349671 0 0 0 0.163104 0.304631 0 0.17292 0 0.0956407 0 0 0.0603425 0 0.0396988 0 0 0 0 0 0.116704 0 0.0779869 0.22822 9.51129 5.57103 0.109901 0.27321 0.101062 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052910 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top