TCONS_00052909 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00052909
Unique Name	TCONS_00052909
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	2740

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_222:294414..305503+
coding sequence from alignment at scaffold_222:294414..305503+

transcript sequence

>TCONS_00052909 ID=TCONS_00052909|Name=TCONS_00052909|organism=Clytia hemisphaerica|type=transcript|length=2740bp
TAACGTTCGTACTATCATAAAGATaaacaaattgaaattgaaaaattgaa
ttgaatttttctcCCGCCATCTTGCATCCATCAGTGCAGACCGCGCGGGA
AAATTATCAGAAAAATAGACTTGTTTGTAGAGCAAGATATGTTTTTGTGC
CCGAGATCCAAAATGTAACCTTGGTAATAACTTTGAGTAAGATCTCAATA
GAGGTGAAAGAAGCAGTTATTGAAACGGTGAAAATAGTGAAAAACAGAAG
CTGAAAAGGAAGAAACCTGGATGCTGGCAGCTGGTCAGCTGAAGAAACAT
CAAAGCAGAACGCTGACAGTCTGGTGGTTAATTGGAAAAGATAAGTCGCT
CATCTCTAGTTGTGCGaacaaatgaaatgaaatactTTCCTTCAAATAAA
AGAAGTTCAAGCTTCTGCATACATCGATACAAATGGTCAATAAATTTGGG
AAAGCCAAATGGCGAGATAAATACTACAAAGTCAAAGGTCGAAAGTAATG
AGAAGTTGTAAAAAAGACTTTATGAGATGGGGTATTCTTCCTGGATTCTG
TTTCTTCATATTCATGATTTGGATTATGTACTTTTTTCTTATGCCAGAGG
GCAATTATGTTCAAGGAATTTATTACTTATGGAAAACCCCATCAAAAGCG
GTTATAACTGCAGACCTCGAAACGACATTGGATACACGCACAACTTCATT
TACGACCAGCCCAAATGCACCAACGACTATTACAACAATAATAGCAACCA
CTCCAACCCCAACCCCAACCACGACAACGACTACtacaaccacaacaaca
acccccccaaccacaacaacgaccaccccgaCCACAACAACCACCACTcc
caccacaacaacaacaactccaACCACaacaacgactaccccaaccacaa
caacgactaccccaaccacaacaacgaccacgccaactacaacaacaacc
acgcctaccacaacaacgaccacgccaaccacaacaacgactatcccaac
cacaacaacaactacaacaacgaccacgccaaccacaacaacgactaccc
caaccacaacaacaactacaacaacgaccacgccaactacaacaacaacc
acgcctaccacaacaacgaccacgccaaccacaacaacgaccacgccaac
cacaacaacgactaccccaaccacaacaacaactacaacaacgaccacgc
caaccacaacaacgactaccccaaccacaacaacaactacaacaacgacc
acgccaaccacaacaacgactaccccaaccacaacaacaactacaacaac
gaccacgccaaccacaacaacgactaccccaaccacaacaacaactacaa
caacgaccactcccaCCACCACAACGACCACgccaactacaacaacgacc
actccaaccacaacaacgaccactcccaccacaacaacgaccactcccac
cacaacaacgaccactccaaccacaacaacgaccacgACAACTACAACAA
CTACAACGACTACCCCAACCACAACAACGACTACAGCTGCAATATCGCCT
ACTTGTCGAAAATGGCTCAAGGGTGGGAGGCACTGGACAGTACTCCTCCG
CAATGAACCTCAGACTTTTATGTACTATACTTGGAGAATAGAAACGTGTT
ATACTTTGTGTTTGGGAATTATACAACAAGGACCTTATATTGGATTAATT
ACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACTTCATATGTTGATTA
TTCTCACAGTAATAATGATATATGTTTCTTCTAATCATGTTAGAAGGAGA
TGTCGAGATAGATTTTGCATTACATTTTTAATTATCATTGCGTACCGCCG
CTTAGTAAAATCTCTGAAAGAAGATACCTtacataaaagaagaaatttag
cgaaagtttaaaatttgatgtgTTTTCAAGAAATTCTGGTACAAAAATTT
TGTAAGAAAAGGCAtattttaaggcctgaaatactgaaatattttaagaa
atattttaaaaaagttggaaatacacattttttataagcaacacCATTTT
TTGGTATAGGGCTTAGAGGTGCTAAGGAATTTAACGGATTTCACCTATAA
ATTGCATATggattttgagccaaaaaaactTAGCTCTAGTTAAGACGGCC
CACTATTCGcactgcctattctaattgtggaTTAAAGTTGGCAgaaagtt
ggctgtctaaagtcaatgcattgccatCTTTTGACGTCTTTTGACGTCTT
TTgatgtcttctttcaatcttttccaagcaaaggtTTTAACTTCCAACTT
TGTGCCTActtactctaacaattagaataggctgGGCAGAAAGTTGagcg
tctaaactagagcttagcaAATTCAACATTGGTATGCACATACTATAATG
TCGAAAAGAGCTCATTTTTAGGTAATTTTGGTTGCTTTCCCGGTTCATGC
TCAGTTTTAGGGCTAGGCtgctaagctctagtttagacggcccacttttt
gcctTGCTTATTCTTATTGTAAATCACATTGATCATAAAGTTTGCTGttt
aaagtcaatgcattgccctcttttgacgtcaaagcaatgtctttttaaga
ttaatactcaaaataaaaaattaagaatatccgaagTTTTTGattgatca
aagattttggatgttcttataaaaaaacgtgtatttcgtCCAGTTTTATC
TGAACCGTCAATGGCTTTTAAGTACGAACCGTTTCCTTTG

Run BLAST on NCBI

protein sequence of TCONS_00052909-protein

>TCONS_00052909-protein ID=TCONS_00052909-protein|Name=TCONS_00052909-protein|organism=Clytia hemisphaerica|type=polypeptide|length=428bp
MRSCKKDFMRWGILPGFCFFIFMIWIMYFFLMPEGNYVQGIYYLWKTPSK
AVITADLETTLDTRTTSFTTSPNAPTTITTIIATTPTPTPTTTTTTTTTT
TTPPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTT
TTPTTTTTTPTTTTTIPTTTTTTTTTTPTTTTTTPTTTTTTTTTTPTTTT
TTPTTTTTTPTTTTTTPTTTTTTPTTTTTTTTTTPTTTTTTPTTTTTTTT
TTPTTTTTTPTTTTTTTTTTPTTTTTTPTTTTTTTTTTPTTTTTTPTTTT
TTPTTTTTTPTTTTTTPTTTTTTPTTTTTTTTTTTTTTTPTTTTTTAAIS
PTCRKWLKGGRHWTVLLRNEPQTFMYYTWRIETCYTLCLGIIQQGPYIGL
ITRPPECWCFKTTSYVDYSHSNNDICFF

Run BLAST on NCBI

transcript from alignment at scaffold_222:294414..305503+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00052909 ID=TCONS_00052909|Name=TCONS_00052909|organism=Clytia hemisphaerica|type=transcript|length=11090bp|location=Sequence derived from alignment at scaffold_222:294414..305503+ (Clytia hemisphaerica)
TAACGTTCGTACTATCATAAAGATaaacaaattgaaattgaaaaattgaa
ttgaatttttctcCCGCCATCTTGCATCCATCAGTGCAGACCGCGCGGGA
AAATTATCAGAAAAATAGACTTGTTTGTAGAGCAAGATATGTTTTTGTGC
CCGAGATCCAAAATGTAACCTTGGTAATAACTTTGAGTAAGATCTCAATA
GAGGTGAAAGAAGCAGTTATTGAAACGGTGAAAATAGTGAAAAACAGAAG
CTGAAAAGGAAGAAACCTGGATGCTGGCAGCTGGTCAGCTGAAGAAACAT
CAAAGCAGAACGCTGACAGTCTGGTGGTTAATTGGAAAAGATAAGTCGCT
CATCTCTAGTTGTGCGaacaaatgaaatgaaatactTTCCTTCAAATAAA
AGAAGTTCAAGCTTCTGCATACATCGATACAAATGGTCAATAAATTTGGG
AAAGCCAAATGGCGAGATAAATACTACAAAGTCAAAGGTCGAAAGTAATG
AGAAGTTGTAAAAAAGACTTTATGAGATGGGGTATTCTTCCTGGATTCTG
TTTCTTCATATTCATGATTTGGATTATGTACTTTTTTCTTATGCCAGAGG
taaaacattttatttcatattttcactTCCTTGTAttcagacgatctcaa
tcgaacgaaatcgacgatcgaaccagtcgaaccaaatcgaacgcaatcga
ccaattgaaattcgattgtcgaacgcaatcgaatctcaatcgaacgtcaa
aattctgagtaatattcgattggttcgattgttgttcgacNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatca
tgcatattgtaataattatgcatggttttatcattgtttttctgctggac
tacataattattcaacagggtggcctctttgaaaaaaggtctattcgatT
GTCGTTCGACTGCGTTCGATTGCGGTTTAATCATCTTTCGACTGCGTTTG
ATTGCTCTATGCTCTAAAGAAGGCCGATTTTCCATCGTAAATCAAAGAAG
AGAAGAGTGTTTGATGCCCTCTGATGTCCTGGAAACATACAATCCACCAC
TTTCGTCATACTTTCTCGACCATATGGAAAGGATATATATGATTCGTCAC
GTGACCTTATTCGGCAATTTGTCCTTTGGTCCTTCCGCCCTTATGATAAC
TCTTGCTTTTCTTATCCCACCCTTACTAGCTTCGGACCAAATCCTTAGGT
CACGGTTCAAAACTTCATGTTTTCCCGTGCAAAAAAAAGAAGCGCTTCAA
TGTTAGCAAAGCAATGCCAATAAGAACGAGAACCATGACGCAACCACCAG
CACcgcgcaatcgaacgcaatcaaatctcaatcgaacgcaatcgaatatc
aattgaatctgaaaattgcggtaatattcgattgagatttgattgcattc
gacaatcgaatttcaatcagtcgattgcgttcgatttggttagactggtt
cgatcgtcggttccgtttgattgagatcgtctggttgtATAAAATGCCAA
CATATATACCTTGCTTTAGTCGTATGGGAGAGGgagacagtcttttgaat
aaatAATTACACCAGcagaaattttgttaaaataatAACGTCATAAATTG
ATCTGTCTTTTACAACACAACTGTTACCTAGGTAAGATAATTTATCCGCA
TTTGTACTAGAAGTGTAATTTATTATTCAATAGAAGTCTGCaaagtaccg
taagttggtctaatgtcgacatctcCCTTCTAAGCAGTTAGTGCATAGTG
GAAGTACTTCGATTTGTGAAGCGTCTTTAGTtacatagaacaaaagaaaa
gaacaaaagaataaaggaattacccatagtCACCATTTGGCAACCATGGG
GAATTGTCTCTACAATATAGAAATCCTGAAATAAGCGCCctgctcgaata
agcgcccccctttgAATAAGCACCCCCCTCCAGgaaggggcgcttattcg
aattgGTGGCCTAGGCTAATTTCCGGGATAAGAATTTCTCTTCGGATGAT
TAACAGTCGAAaaatttggaacaaaaataaaaatcaaggtcttttagctt
tcttttttttctgtttctttttcttcagattcatttttcacttttacaaa
gcaaatttttcttttattcatccttttgtgaaaaatcaaccctttgaaac
agttaagtttaagcagattccaaatttgttgatatacgaatttctgaaat
aaagaaataagcgcccgctcgaataagcgcctcGCTTGAATGAGCGCCGC
ccttagagcctgaaaaattaaataagcgctCGGGCGCTTATTCAAGGATT
TACGGTATGTACAAAAATTacctgttttctccttgaagCTTGAattatgt
ttcttttatattctgCAATTGCAATAATACCAAATAATACCAATGCATCA
NTTGAattatgtttcttttatattctgCAATTGCAATAATACCAAATAAT
ACCATGCATCGACACTTAACACTCTCCAACTTTTAACTGCACTGTTCAAA
agagataacataacccccatttttagtaaaaatttggagcttgtttccac
tgccaattatatccgGATGCACTTTAGTTACAAAGTTTGTGAAAAAACTT
CTGTTGGTTGTTTTGAATAAGTATCACCCTTGTGATCACAAATCTTCAGC
TGGACAGTTTGAAATTATGTCATGTTTTTTATGTCGTCACAAGCAAAACA
TTGAAAGAAAATATGGACATATTATACATCAATTAACGCGATTCTCGATA
ctgtaaagtaaaaaaaaaaaaaaagaactcaCTTGCTTTcgttttgaagc
aaaaaacagtgcggttttgattgttttggttgCGTAGCCAAGTTATTGTA
ACATTTGCCACATTCCTTTAGAGCAAAGCATGTTGCATGGATGTTCTGTT
ATGAGACCACTCTCCCACTATGTTATGAGACTCTCCCACTCAATACGACC
CTGGTCGCCAGCACTGTACAGTTATATCCAATGGATGGATTTGAGTGTCT
GTGGGATTTTGGGGCTAGGTTACTGAATTACtgatagacaaaatattttt
tttccctCTGACCTTTGATCAaataaataccttaagggaagaagtttaag
cggaaagaaaatttgaaatttcctgccaaatttaaattattgtaTTCATC
TACTCCCAAATGTGGGTTATTTCAGGCCTGAAAGAACaaggttttttctt
atttaataAGGTTCTTTTTGGCCAAAGATATCCTTCATCTGCTACAATTA
AATTCcagccaaatttaatttttcaagacaTCCACCAAATGAAATtcctt
cagaaaaaaattttttttaccatctaccaaattaaattctcgccaacATT
TCTTCTGTTAAGTTAGTATGCAGTATGCAGTGCCGTTGAGTCTCAACAAG
GACAAAATGcttgctgctctgccacccaatcTCCTAAAAAGAAGATAGTT
GGGCATGTGTTATATTCTTCATCAGTAATTCCGATCTTGGTATTATCACC
AGTTCTAATAAAGAAGGGTGTTAAAATTGGATGTGGCATGTCGACATATA
TGACTAACTTATGGTACAATCGATAACTTTttccaatagacgatatcggc
tttccgaattctccccgaatgattacccatgatgcattgcgcaaaaattt
cacggaaagtcaatatcgtccgtgaatttttttgcgcaatgcatcatggg
taatcattcggggagaattcggaaagccgatatagTCTATTGATGACCAA
TTGAAAAGCTTGCAACATTTTCTCTTCTCGAAAAAAGACATTTAATGTCA
TCAAACAAGAAATTTGCAAAAGCCGTGATTCAACAATGCCATAGCCTTAT
GATGAAGCAGCCGGCGAATTGATAACCAATTGATGAATCGGATATTTTAA
TCTATTAAACATTAGATAATCAGGATTTAAAGGGATTGATAGGCCTGATT
ACCTGGCCTATCAATTTATTATCGATTGGTTCCAAGATGATTGTTTGATC
AAAAATTGATAGGCAATTGATGAAAAATACCAATcgatatatacttttga
taatCAAAACAATCAATATCCAGTccatcgattcgtcatcgattagaaaa
agttattgattgtatcgAGTAGGGGAGTTTAGAAAACGGTGACCTTTCGA
AGGACACTATGTCACGTTGAATATGATTAAAAACTCTGTTGACTCTGCAA
AGAcaattactatatatatttATTAAAGTAAGCAACAAAACATATTTATG
GGTAAtgcatgaattttgaaaaattaagtgCGATGGGTTAGTTTTAGGTC
TGCTTTCGAGAGGCTCTTGAGGGCTTTAcacattgatttttcaaaagggA
TAATCATTTTTTCCTGTTTTATGTGAAGCATCTTAGAATTCTTTGGACTC
ACCCTAAAGTcttagttttatttttgattaaaaagaaCCAACTCGCATTC
GTTAAATGTAGGGCAATTATGTTCAAGGAATTTACTACTTCTTGGAAAAC
TCATCAAAACCAGTTGTGATACCCGACCTAAAAACTACATTGAATACACA
TACGACATCATTTTCGACCACCCCAACTACACCAACAACAATCTTTGCAG
CCAAAAGTACAACCACTCCAACCATCACAAAGACGACTACTCCAACGACA
ACAACCACCACtccaactacaacaacgaccattCCGAGCACAACAACAAC
CACTCCAACCACGACAACCACCACTCCGACCACAACAACCACCACACCAA
CCACAACAACCACCACTCCCATCACAACAACCACCACTCCCTTCACAACA
ACCACCACACCAACCACAACAACCACCACTCCGACCACCACTCCgaccac
aacaacaaccactccgaccacaacaacaaccactccaactacaacaacca
ccactcccaccacaacaacaacaacaacgaccaccccaactaccacaacg
accactccaatcacaacaacgaccaccccaacTACCACAACGACCACTCC
AACCACAACGACTACCACTTCAACCACAACAACCACCACTCCAACCACAA
CAGCTGGAATATCGCCTAGTAAGTAATAAGATTTCAATATTCTCAAGAGT
CTTACAAGTTAGATTTCTACGCTTATTTCTTCTATGTTGAAAGCTAAGCC
CTGATGTAAGTTTTAGTTTGTAAAATCatgatatttttattaatttaggt
tttttgccaaaaatgttgaaatttattCGATGCATAAATCAAGTGATGTT
TTTTAAATCATAAGAATTTTACTTCATAAAAGGATTTGCCTGTTTTCTTT
GGgacacttttttttaattctataaTTGCAATGGCTAgaattaacatttt
ttttcttccttctaGCTTGTCAAAATTGGGTCAAGGGTGAGAGGCACTGG
ACAGCAGTCCTCAACACTAAACTTCAGACTTTTATGTTCTATGATAGGAA
AAAAGATACATGTTATAGTTTGTGTTTGGGAGTTGTACAACAAGGATACA
TTGGATGTATTACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACTTCA
TATATTGATTATTCTATGGGTAATACTATGGATGTTTGTTTCTTCTAATC
ATGTTAGAAGGAGATGTCGAGATAGATTTTGCATTACATTTTCAATTATC
TTCAATCTTCAATCATTTTATACCGCCGCTTTGTAAAAGCTCTGAAAGAA
GATACCTTacataaaggaagaaattttggcgaaaattttttatttgagtt
ttCCTTATTTTAGACAAGCAAAACGCATGTTTGAAGGTCAAATGCATGTG
GTCGAGGTGAATGAAAAGGTTAAATTTAAGGAATGCTGGAAATGAATTTA
ATTTAGTTGATATTTATTTTGACGATGGATTtcgaacaaaaataaattac
ggtgggaacttaatttggcaagCTATTGCCAAATTCaccaaagtttttct
tttccgcTCGTTCAATGcgttttaaagggacataaaagtactgacgaaat
ttgtaaacaaactgtatgcagcgagatacaaaatcaaaacaaatatggct
gattttgattgtttcaaatgttttacaagtttgttttggacacgtgatta
taattgttctctttaatgacacgtggttcgcgcaatgtttacattttact
actctTATGTCCCTTCAAAGGCTCAGCTCTGCTTTATTTGTAAAATCTTG
GGTATATATTTCCATTTTCTATTCCCTATAGGCTATGGACATTAATTTTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcccgtttatttggc
acccaAGAGTAAATATTAATTTGAAAGTGATTTGCAAGTGATAGTGTCTC
TATATGTATCTAACTTTCAGGggacgaaaatttttttttacttttttccc
tTGTTAATTCACTACAAAACCCCTTATTTACATGACACATACTATTGCAT
TTCGTGTATCTTGGATTATCTAAACGAACATTTAAAAAccacttttgaaa
tattttttccaatttttctttatatCCCAGATAAAGCAATGGTTTTAGTA
TCTTTAGAAATGTAttttaaatatctttcaaaaaagtatttcgATCTATg
ctctattttatttttgaagtgGTTAGGAGTTCATATATTTTATACATTTG
GTATATTGGCTAATTTTGAACGTATTACACGTAAAGCTTTTATGgtaata
tgtaatagttatcgaaCAGTTGcgaatatgagaaatattttacgagttcc
gagatttttccgtaggaaaatatacggaaaatccggaacgagtgaaatat
ttccatattgtacgagcataTTACCATAAAAGCTTTACGTTCAATACGTT
CAAAATTAGCAAATAtaattgtttcaacgttcatctaacgttatatggac
gttatgaacgttagatgtttttatttcatcattttttcacCTAAGAAATT
CAGTTTTTACTGGTTCTTAGAGTCCAtaaggcttaaaatgttcttaattt
gtttttaatgttttggaATGTTTATTTATATTGTTTgttattcttaaaaa
attgtaCAATGATTTATAAGATTTAGCTACCTAGAAATTTTAACCCTtag
ctttttgtttttataagagccaGTAAAATTTATAATATATTGGTGATTTA
ATGTAAAGGTTAAATTATATTTTAACTTTATTTCGCTCCGCACGCCCTAA
CCCCTTCTTAACCAGCATCATCTGAGCAAATCACGCCATATTAGAAGGCG
CCGTTCGGCACTTTCTACGATTTGACAAATTCCTAGCTTCCATTGTTCTC
GGATAAAAAGAGCCTCTAACCTTCTTTCTGTAATTTGAGCTGTGCAAAAT
CTAGCCCTACAATTCATATAAAAAGGTTGCAGGATTCTATCTGGATATTT
ATTGTTTATATAAAGGGACAATTttatccaaaatatttcttgtttaGTTA
GCCAAGAGTCATgccaaaataatgaaatatgaATCTCAATTTATTACCCC
TCCGTGCCTATGAAAGTACAATTTAAAAtcacggtttaaacgatatattt
gacattgaaaattaatttgtaCTATAAATATCATTTTTATGACACCTCTA
AAATAATGTCATAATGTTCAAAGGTGTgaaaagtttagaacatttcTATT
TCAAGAGATTTTAAAACTCCCCCTCCCCCTCAATGCGAATAAGACTACAC
TcagaattttaaaatctaattaACATCCGTCAATTGTAGGGCAATTATGT
TCAAGGAATTTATTACTTATGGAAAACCCCATCAAAAGCGGTTATAACTG
CAGACCTCGAAACGACATTGGATACACGCACAACTTCATTTACGACCAGC
CCAAATGCACCAACGACTATTACAACAATAATAGCAACCACTCCAACCCC
AACCCCAACCACGACAACGACTACtacaaccacaacaacaacccccccaa
ccacaacaacgaccaccccgaCCACAACAACCACCACTcccaccacaaca
acaacaactccaACCACATCAACGACCACCCCTACCACAACAACCACCAC
GCCAACCACAACAACGACTACCCCAACCACTACaaccacaacaacgacca
cgccaaccacaacaacgactaccccaaccacaacaacgactaccccaacc
acaacaacgaccacgccaactacaacaacaaccacgcctaccacaacaac
gaccacgccaaccacaacaacgactatcccaaccacaacaacaactacaa
caacgaccacgccaaccacaacaacgactaccccaaccacaacaacaact
acaacaacgaccacgccaactacaacaacaaccacgcctaccacaacaac
gaccacgccaaccacaacaacgaccacgccaaccacaacaacgactaccc
caaccacaacaacaactacaacaacgaccacgccaaccacaacaacgact
accccaaccacaacaacaactacaacaacgaccacgccaaccacaacaac
gactaccccaaccacaacaacaactacaacaacgaccacgccaaccacaa
caacgactaccccaaccacaacaacaactacaacaacgaccactcccaCC
ACCACAACGACCACgccaactacaacaacgaccactccaaccacaacaac
gaccactcccaccacaacaacgaccactcccaccacaacaacgaccactc
caaccacaacaacgaccacgACAACTACAACAACTACAACGACTACCCCA
ACCACAACAACGACTACAGCTGCAATATCGCCTAGTAAGTATAAACATAT
GATATTTCAAGAGCTTTAGACTTTAGAAACTGTAACCTTTTGGTTCACGA
TCGATAAAAAATATAACTGTAGCAGTCTCCATTTTtaagacaattttttt
ctaaataaaatctattttgatatctttttattcTAATGCACTATAATAAG
AATGACAGTCAAAAGGTCAAACACCCCATGAGGCAAAAAAGAACACAAGC
AAGAAACCAACCTATGCAAGGGTGATGTTGTAtcagaatttttcttttcc
tatttGGACCGCCTTAACCGGGTTATAAGATGCTATAAGATGCTCCAACT
AACTTATTCTAACAACGACCACGacatttaactttcttttctcttttcta
gCTTGTCGAAAATGGCTCAAGGGTGGGAGGCACTGGACAGTACTCCTCCG
CAATGAACCTCAGACTTTTATGTACTATACTTGGAGAATAGAAACGTGTT
ATACTTTGTGTTTGGGAATTATACAACAAGGACCTTATATTGGATTAATT
ACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACTTCATATGTTGATTA
TTCTCACAGTAATAATGATATATGTTTCTTCTAATCATGTTAGAAGGAGA
TGTCGAGATAGATTTTGCATTACATTTTTAATTATCATTGCGTACCGCCG
CTTAGTAAAATCTCTGAAAGAAGATACCTtacataaaagaagaaatttag
cgaaagtttaaaatttgatgtgTTTTCAAGAAATTCTGGTACAAAAATTT
TGTAAGAAAAGGCAtattttaaggcctgaaatactgaaatattttaagaa
atattttaaaaaagttggaaatacacattttttataagcaacacCATTTT
TTGGTATAGGGCTTAGAGGTGCTAAGGAATTTAACGGATTTCACCTATAA
ATTGCATATggattttgagccaaaaaaactTAGCTCTAGTTAAGACGGCC
CACTATTCGcactgcctattctaattgtggaTTAAAGTTGGCAgaaagtt
ggctgtctaaagtcaatgcattgccatCTTTTGACGTCTTTTGACGTCTT
TTgatgtcttctttcaatcttttccaagcaaaggtTTTAACTTCCAACTT
TGTGCCTActtactctaacaattagaataggctgGGCAGAAAGTTGagcg
tctaaactagagcttagcaAATTCAACATTGGTATGCACATACTATAATG
TCGAAAAGAGCTCATTTTTAGGTAATTTTGGTTGCTTTCCCGGTTCATGC
TCAGTTTTAGGGCTAGGCtgctaagctctagtttagacggcccacttttt
gcctTGCTTATTCTTATTGTAAATCACATTGATCATAAAGTTTGCTGttt
aaagtcaatgcattgccctcttttgacgtcaaagcaatgtctttttaaga
ttaatactcaaaataaaaaattaagaatatccgaagTTTTTGattgatca
aagattttggatgttcttataaaaaaacgtgtatttcgtCCAGTTTTATC
TGAACCGTCAATGGCTTTTAAGTACGAACCGTTTCCTTTG

Coding sequence (CDS) from alignment at scaffold_222:294414..305503+

>TCONS_00052909 ID=TCONS_00052909|Name=TCONS_00052909|organism=Clytia hemisphaerica|type=CDS|length=5148bp|location=Sequence derived from alignment at scaffold_222:294414..305503+ (Clytia hemisphaerica)
ATGAGAAGTTGTAAAAAAGACTTTATGAGATGGGGTATTCTTCCTGGATT
CTGTTTCTTCATATTCATGATTTGGATTATGTACTTTTTTCTTATGCCAG
AGGGCAATTATGTTCAAGGAATTTATTACTTATGGAAAACCCCATCAAAA
GCGGTTATAACTGCAGACCTCGAAACGACATTGGATACACGCACAACTTC
ATTTACGACCAGCCCAAATGCACCAACGACTATTACAACAATAATAGCAA
CCACTCCAACCCCAACCCCAACCACGACAACGACTACtacaaccacaaca
acaacccccccaaccacaacaacgaccaccccgaCCACAACAACCACCAC
TcccaccacaacaacaacaactccaACCACaacaacgactaccccaacca
caacaacgactaccccaaccacaacaacgaccacgccaactacaacaaca
accacgcctaccacaacaacgaccacgccaaccacaacaacgactatccc
aaccacaacaacaactacaacaacgaccacgccaaccacaacaacgacta
ccccaaccacaacaacaactacaacaacgaccacgccaactacaacaaca
accacgcctaccacaacaacgaccacgccaaccacaacaacgaccacgcc
aaccacaacaacgactaccccaaccacaacaacaactacaacaacgacca
cgccaaccacaacaacgactaccccaaccacaacaacaactacaacaacg
accacgccaaccacaacaacgactaccccaaccacaacaacaactacaac
aacgaccacgccaaccacaacaacgactaccccaaccacaacaacaacta
caacaacgaccactcccaCCACCACAACGACCACgccaactacaacaacg
accactccaaccacaacaacgaccactcccaccacaacaacgaccactcc
caccacaacaacgaccactccaaccacaacaacgaccacgACAACTACAA
CAACTACAACGACTACCCCAACCACAACAACGACTACAGCTGCAATATCG
CCTACTTGTCGAAAATGGCTCAAGGGTGGGAGGCACTGGACAGTACTCCT
CCGCAATGAACCTCAGACTTTTATGTACTATACTTGGAGAATAGAAACGT
GTTATACTTTGTGTTTGGGAATTATACAACAAGGACCTTATATTGGATTA
ATTACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACTTCATATGTTGA
TTATTCTCACAGTAATAATGATATATGTTTCTTCTAAATGAGAAGTTGTA
AAAAAGACTTTATGAGATGGGGTATTCTTCCTGGATTCTGTTTCTTCATA
TTCATGATTTGGATTATGTACTTTTTTCTTATGCCAGAGGGCAATTATGT
TCAAGGAATTTATTACTTATGGAAAACCCCATCAAAAGCGGTTATAACTG
CAGACCTCGAAACGACATTGGATACACGCACAACTTCATTTACGACCAGC
CCAAATGCACCAACGACTATTACAACAATAATAGCAACCACTCCAACCCC
AACCCCAACCACGACAACGACTACtacaaccacaacaacaacccccccaa
ccacaacaacgaccaccccgaCCACAACAACCACCACTcccaccacaaca
acaacaactccaACCACaacaacgactaccccaaccacaacaacgactac
cccaaccacaacaacgaccacgccaactacaacaacaaccacgcctacca
caacaacgaccacgccaaccacaacaacgactatcccaaccacaacaaca
actacaacaacgaccacgccaaccacaacaacgactaccccaaccacaac
aacaactacaacaacgaccacgccaactacaacaacaaccacgcctacca
caacaacgaccacgccaaccacaacaacgaccacgccaaccacaacaacg
actaccccaaccacaacaacaactacaacaacgaccacgccaaccacaac
aacgactaccccaaccacaacaacaactacaacaacgaccacgccaacca
caacaacgactaccccaaccacaacaacaactacaacaacgaccacgcca
accacaacaacgactaccccaaccacaacaacaactacaacaacgaccac
tcccaCCACCACAACGACCACgccaactacaacaacgaccactccaacca
caacaacgaccactcccaccacaacaacgaccactcccaccacaacaacg
accactccaaccacaacaacgaccacgACAACTACAACAACTACAACGAC
TACCCCAACCACAACAACGACTACAGCTGCAATATCGCCTACTTGTCGAA
AATGGCTCAAGGGTGGGAGGCACTGGACAGTACTCCTCCGCAATGAACCT
CAGACTTTTATGTACTATACTTGGAGAATAGAAACGTGTTATACTTTGTG
TTTGGGAATTATACAACAAGGACCTTATATTGGATTAATTACTCGGCCAC
CTGAATGCTGGTGTTTTAAAACAACTTCATATGTTGATTATTCTCACAGT
AATAATGATATATGTTTCTTCTAAATGAGAAGTTGTAAAAAAGACTTTAT
GAGATGGGGTATTCTTCCTGGATTCTGTTTCTTCATATTCATGATTTGGA
TTATGTACTTTTTTCTTATGCCAGAGGGCAATTATGTTCAAGGAATTTAT
TACTTATGGAAAACCCCATCAAAAGCGGTTATAACTGCAGACCTCGAAAC
GACATTGGATACACGCACAACTTCATTTACGACCAGCCCAAATGCACCAA
CGACTATTACAACAATAATAGCAACCACTCCAACCCCAACCCCAACCACG
ACAACGACTACtacaaccacaacaacaacccccccaaccacaacaacgac
caccccgaCCACAACAACCACCACTcccaccacaacaacaacaactccaA
CCACaacaacgactaccccaaccacaacaacgactaccccaaccacaaca
acgaccacgccaactacaacaacaaccacgcctaccacaacaacgaccac
gccaaccacaacaacgactatcccaaccacaacaacaactacaacaacga
ccacgccaaccacaacaacgactaccccaaccacaacaacaactacaaca
acgaccacgccaactacaacaacaaccacgcctaccacaacaacgaccac
gccaaccacaacaacgaccacgccaaccacaacaacgactaccccaacca
caacaacaactacaacaacgaccacgccaaccacaacaacgactacccca
accacaacaacaactacaacaacgaccacgccaaccacaacaacgactac
cccaaccacaacaacaactacaacaacgaccacgccaaccacaacaacga
ctaccccaaccacaacaacaactacaacaacgaccactcccaCCACCACA
ACGACCACgccaactacaacaacgaccactccaaccacaacaacgaccac
tcccaccacaacaacgaccactcccaccacaacaacgaccactccaacca
caacaacgaccacgACAACTACAACAACTACAACGACTACCCCAACCACA
ACAACGACTACAGCTGCAATATCGCCTACTTGTCGAAAATGGCTCAAGGG
TGGGAGGCACTGGACAGTACTCCTCCGCAATGAACCTCAGACTTTTATGT
ACTATACTTGGAGAATAGAAACGTGTTATACTTTGTGTTTGGGAATTATA
CAACAAGGACCTTATATTGGATTAATTACTCGGCCACCTGAATGCTGGTG
TTTTAAAACAACTTCATATGTTGATTATTCTCACAGTAATAATGATATAT
GTTTCTTCTAAATGAGAAGTTGTAAAAAAGACTTTATGAGATGGGGTATT
CTTCCTGGATTCTGTTTCTTCATATTCATGATTTGGATTATGTACTTTTT
TCTTATGCCAGAGGGCAATTATGTTCAAGGAATTTATTACTTATGGAAAA
CCCCATCAAAAGCGGTTATAACTGCAGACCTCGAAACGACATTGGATACA
CGCACAACTTCATTTACGACCAGCCCAAATGCACCAACGACTATTACAAC
AATAATAGCAACCACTCCAACCCCAACCCCAACCACGACAACGACTACta
caaccacaacaacaacccccccaaccacaacaacgaccaccccgaCCACA
ACAACCACCACTcccaccacaacaacaacaactccaACCACaacaacgac
taccccaaccacaacaacgactaccccaaccacaacaacgaccacgccaa
ctacaacaacaaccacgcctaccacaacaacgaccacgccaaccacaaca
acgactatcccaaccacaacaacaactacaacaacgaccacgccaaccac
aacaacgactaccccaaccacaacaacaactacaacaacgaccacgccaa
ctacaacaacaaccacgcctaccacaacaacgaccacgccaaccacaaca
acgaccacgccaaccacaacaacgactaccccaaccacaacaacaactac
aacaacgaccacgccaaccacaacaacgactaccccaaccacaacaacaa
ctacaacaacgaccacgccaaccacaacaacgactaccccaaccacaaca
acaactacaacaacgaccacgccaaccacaacaacgactaccccaaccac
aacaacaactacaacaacgaccactcccaCCACCACAACGACCACgccaa
ctacaacaacgaccactccaaccacaacaacgaccactcccaccacaaca
acgaccactcccaccacaacaacgaccactccaaccacaacaacgaccac
gACAACTACAACAACTACAACGACTACCCCAACCACAACAACGACTACAG
CTGCAATATCGCCTACTTGTCGAAAATGGCTCAAGGGTGGGAGGCACTGG
ACAGTACTCCTCCGCAATGAACCTCAGACTTTTATGTACTATACTTGGAG
AATAGAAACGTGTTATACTTTGTGTTTGGGAATTATACAACAAGGACCTT
ATATTGGATTAATTACTCGGCCACCTGAATGCTGGTGTTTTAAAACAACT
TCATATGTTGATTATTCTCACAGTAATAATGATATATGTTTCTTCTAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033429	XLOC_033429	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052909-exon-scaffold_222-1491911889:294414..295012	TCONS_00052909-exon-scaffold_222-1491911889:294414..295012	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1510915933:294414..295012	TCONS_00052909-exon-scaffold_222-1510915933:294414..295012	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1575043694:294414..295012	TCONS_00052909-exon-scaffold_222-1575043694:294414..295012	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1491911889:302903..303180	TCONS_00052909-exon-scaffold_222-1491911889:302903..303180	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1510915933:302903..303180	TCONS_00052909-exon-scaffold_222-1510915933:302903..303180	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1575043694:302903..303180	TCONS_00052909-exon-scaffold_222-1575043694:302903..303180	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1491911889:303274..303947	TCONS_00052909-exon-scaffold_222-1491911889:303274..303947	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1510915933:303274..303947	TCONS_00052909-exon-scaffold_222-1510915933:303274..303947	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1575043694:303274..303947	TCONS_00052909-exon-scaffold_222-1575043694:303274..303947	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1491911889:304315..305503	TCONS_00052909-exon-scaffold_222-1491911889:304315..305503	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1510915933:304315..305503	TCONS_00052909-exon-scaffold_222-1510915933:304315..305503	Clytia hemisphaerica	exon
TCONS_00052909-exon-scaffold_222-1575043694:304315..305503	TCONS_00052909-exon-scaffold_222-1575043694:304315..305503	Clytia hemisphaerica	exon

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00052909-protein	TCONS_00052909-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_222	supercontig	scaffold_222:294414..305503 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.32804	1.76491	0.797181	0.855737	5.00318	4.10722	4.68027	4.71504	1.31054	1.87823	2.32771	0.980363	1.19529	1.655	0.179387	0.148929	0.323011	0.395448	0.428152	0.703124	0.269401	0.382744	0.896862	0.937696	28.7767	18.6207	0.0517547	0.0419365	0.455018	0.639682

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00052909 vs. Swiss-Prot (Human)

BLAST of TCONS_00052909 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00052909 (transcript) - C. hemisphaerica