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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052906 ID=TCONS_00052906|Name=TCONS_00052906|organism=Clytia hemisphaerica|type=transcript|length=2698bp
CAAAAAAATCATTcctcaaagttctatttcaaaGCTCATTTATGGTAGTG
GCTAATTAAGTCTGAAAttcgactttctcaaaacatggtcatattgcata
ccaaaatATCACATATTTGATGGATTTGGAAAAACATTAATATCATACAT
CAAAAATGAAGTGAATAAAGGTTTTCACCCTTCAAAGCCGTTTTTTGACA
AATACTTACTTCAGTATACTTcagtttgatttgatgatattcATCTGTCC
AGCTCGTTGAGCCCAACACGTGTAATTTGATCGAAAAGAGCATTTGATTC
AGCCAATCTTGTTTGTCGCGACGTAGTGTGAGGTCCGTCGGGTATAGAGC
ACAGAATATATCGAGTCGTTTCTTGGGGCCTATTTGTTTCACTTACTATA
AATGCTGTAACTGCTACTGCCAAAAATGCATGCAACATaccatgaaaact
ttgaaaatgatagtAAATATAGCAAGTTTCTGTTGTCTACCATCTTGGTA
TTGTGGTCGGGCTTACTACTCAAGATTTTCAGAAGAATGTCCGTGAATTA
TAAGTTGGGAAGTAAAACCATACCTTCAACTTCGCAACAAGGGTCACGTG
ACGTTAAtaatgtaaacaaatatggtTTGGATAATTTatgcgagaaaaaa
aataaatactttgTGGTGGGGCAAGTGGTGAAAAGGTGCATCGGATTGTG
AAGTCGCTTTGCGTGGTGGtagaataaataaatattgaattaaGAATAAT
GAGTTTTAAAACATTGTCAGAATTTTGTTGTCAAACAATTGATGCTACAG
CAATTGAAGAACCAAGAGTTCCGAAgttaattttcccaaaaaaatatgTT
CAACCGTTTACTGAAGAAGAACACAACATCAAAGACATCAAAAGCAAAAC
TAAGCCAAAATTCAAACCTCCAAAAAAGTCGACACCAAAGAATAAGCAGG
CAGAGACACTGGATAACACGACGGACAAGAATACCAATTTGAAGTCAAGA
AAGAGAAACATCAAAGATGCCTCGATTAAACAGattcggactattatACT
GTCGGAccagaaagtgtcggactagtgacatgctgACGACCCCCCTGCTG
CATGCCTGGACTGGAATCAATCGATTGGTTTATCGATTGTTTGTGGGAAG
GGAAGGAAGAGAGTCTGGATTAAAATACACTCAATGTCAGAAAGcctatt
tcaaatttaaattcaaaCACTTACATTAAATTTACCTGATCTGCTGATGG
TTCTGgttttatttgaatatttgtCGTACCTGGTAATTGCAAGTTCCATG
cttttgatttaactttctCATCAACAGGTAAGAATTGTGATTTTGAATGT
CTTTTTATTGAACTTGACTGTAAGATGCTTGTAGGGGTAGTATATAGACA
TCCTGAtaacaaaatacaaattttcaatgATGAGTTTGAGAAAAGAGTTc
ttgaaagaataaaaaatgaagataagAAGGTTATTATTATGGGAGATTAC
AATATAAATTTAATGAACTGTGAATCTCATCGTCACACAAGTAATTTCTT
TGACAAGATGgtttcatttaattttcttcCATACATAATCCAACCAACTA
GATTTAATGGTAACTCTCACACTCTTATcgacaatattttttataacgAC
ATTTCCAATGAATGTATCAGTGGTAACTTAATTCCTCATATCACTGATCA
TTTGCCAAATTTCCTTTTTGTACCTCATTCTGATAATAAAAtaacacaaa
aatttaaaaaaatatcaaaaagagaCTTCTCTGATTTTGATATCTTACGC
TTTAGGgaagatctttcaaatattGACTTCACCAACAAATTCCTTCAGAT
GGAAGATGCTAACCTAATGTATGAATTTTTTCATAAAGGCATGAATCTTT
TATTTGACATACATGCCCCATTTAAActattgacaaaaaatcaaagaaga
aaagaaaaaaacccctGGATGACCAATAAGATTCTtaacaaaataaatat
aaaagatGCACTATATGGGCAGTTTATGAAAGACAAAGACcaacaaattt
tcaaagaatatcaTGAGATCTTGCGAGAGTTAAACAAAGACATACGTAAA
GCAAAATTCATCTACCTCAAAAACAAATTTACACAATCAAAGaatgacat
caaaaaattttggaaaaatatcaaCACCTTCCTTGGTAGAAATAAGACCA
ATCATTACCCAAGAACTATGACTCATCAAGATAAAACATTTACTGACTCT
CATCAGATTAGTGAAGCTTTTAATAAATACTTTTCAGAGGTTGCTCCAAA
TCTTctcaaaaaaattcctaaaaacaCAACTCTTAAACACAAAAACTACC
TTACTAGGATGCAGTATAACAACTCTAGCTTCTTTTTCCAACGAACCAAT
AGGTATGAAGTCTTAACACACCTTAACAACATAAACAGTAATAAAGCCAA
GGATATTTATGATTTCCCTACACGGATTATCAAAGGTATTGCTGATCTAC
TAGCTGATCCTCTTGCTATTATGATAAACAACTCCCTATCCACAGGTGTT
TTCCCTGAACTTTTAAAACATGCTAAAGTAACTCCTCTCTTCAAAAGTGG
ACTTAGAAATGATATAAAAAACTACAGGCCAATATCTGTTCTCCCAATTT
TTGACaagatctttgaaaaaattgttcATGAAAGAATAACTAAATTTC Run BLAST on NCBI protein sequence of TCONS_00052906-protein >TCONS_00052906-protein ID=TCONS_00052906-protein|Name=TCONS_00052906-protein|organism=Clytia hemisphaerica|type=polypeptide|length=441bp
MLVGVVYRHPDNKIQIFNDEFEKRVLERIKNEDKKVIIMGDYNINLMNCE
SHRHTSNFFDKMVSFNFLPYIIQPTRFNGNSHTLIDNIFYNDISNECISG
NLIPHITDHLPNFLFVPHSDNKITQKFKKISKRDFSDFDILRFREDLSNI
DFTNKFLQMEDANLMYEFFHKGMNLLFDIHAPFKLLTKNQRRKEKNPWMT
NKILNKINIKDALYGQFMKDKDQQIFKEYHEILRELNKDIRKAKFIYLKN
KFTQSKNDIKKFWKNINTFLGRNKTNHYPRTMTHQDKTFTDSHQISEAFN
KYFSEVAPNLLKKIPKNTTLKHKNYLTRMQYNNSSFFFQRTNRYEVLTHL
NNINSNKAKDIYDFPTRIIKGIADLLADPLAIMINNSLSTGVFPELLKHA
KVTPLFKSGLRNDIKNYRPISVLPIFDKIFEKIVHERITKF Run BLAST on NCBI transcript from alignment at scaffold_222:282130..292810+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052906 ID=TCONS_00052906|Name=TCONS_00052906|organism=Clytia hemisphaerica|type=transcript|length=10681bp|location=Sequence derived from alignment at scaffold_222:282130..292810+ (Clytia hemisphaerica)
CAAAAAAATCATTcctcaaagttctatttcaaaGCTCATTTATGGTAGTG
GCTAATTAAGTCTGAAAttcgactttctcaaaacatggtcatattgcata
ccaaaatATCACATATTTGATGGATTTGGAAAAACATTAATATCATACAT
CAAAAATGAAGTGAATAAAGGTTTTCACCCTTCAAAGCCGTTTTTTGACA
AATACTTACTTCAGTATACTTcagtttgatttgatgatattcATCTGTCC
AGCTCGTTGAGCCCAACACGTGTAATTTGATCGAAAAGAGCATTTGATTC
AGCCAATCTTGTTTGTCGCGACGTAGTGTGAGGTCCGTCGGGTATAGAGC
ACAGAATATATCGAGTCGTTTCTTGGGGCCTATTTGTTTCACTTACTATA
AATGCTGTAACTGCTACTGCCAAAAATGCATGCAACATaccatgaaaact
ttgaaaatgatagtAAATATAGCAAGTTTCTGTTGTCTACCATCTTGGTA
TTGTGGTCGGGCTTACTACTCAAGATTTTCAGAAGAATGTCCGTGAATTA
TAAGTTGGGAAGTAAAACCATACCTTCAACTTCGCAACAAGGGTCACGTG
ACGTTAAtaatgtaaacaaatatggtTTGGATAATTTatgcgagaaaaaa
aataaatactttgTGGTGGGGCAAGTGGTGAAAAGGTGCATCGGATTGTG
AAGTCGCTTTGCGTGGTGGtagaataaataaatattgaattaaGAATAAT
GAGTTTTAAAACATTGTCAGAATTTTGTTGTCAAACAATTGATGCTACAG
CAATTGAAGAACCAAGAGTTCCGAAgttaattttcccaaaaaaatatgTT
CAACCGTTTACTGAAGAAGAACACAACATCAAAGACATCAAAAGCAAAAC
TAAGCCAAAATTCAAACCTCCAAAAAAGTCGACACCAAAGAATAAGCAGG
CAGAGGCAAGTTTTAAGATCTAGTGATtcgctgtttttttttagtaatga
atagtgatttttttcattttaaggcttttttatgtGATCGTATTTTTAAG
TTATAGCTCCTAAAAAAATCCttgccatgaaattttttgtaattttttta
tcagaaatttTAAGAAGAGCGGGAATCCATGAAAACTTACAATTACGCTT
TCTCTTTAGACACTGGATAACACGACGGACAAGAATACCAATTTGAAGTC
AAGAAAGAGAAACATCAAAGATGCCTCGATTAAACAGGtacatacactct
tttttataagaaccagaaaATTAATCTGTATGTGTAATGTTATTATTGGA
AAATAAAGATTAATAATCTATTAAATCATGTAATATTTTCTATCCTTTAA
GGCTCTGAAGGACGTGACAAATAAACCATCAAGCCCGTCAAGCACTTAGA
CTGAATgtgaaaagaagagaaagaaaagcaaaattgatttcaaactAGTA
AGTAGgatattctttttttgattATACCGATTTATACGCTTTAACTTTAT
TAGCATTTGCGACGATTTCTGCATAATCTGGTAAACAAAGCCACGCTAAA
CTAAAGACTCGCTGACATAATGTCCCCCACCCAAGGGTGCAGCAAGATGC
CTTGACATTGAAATGAATAAGGAAATAAGGTTAGGGTGGTAAATATTTCC
TATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATTTCG
TATGTCAGAGGGAATACTGTTGAAGAGTTTTGGACCCTGTACAGCTAAGC
TCTCACAAATAAATTTGCGAAAGCTACTTTGTTCGATTGTTCGTAGTTGG
CATTTTCGACCATGACGGCTTGTAGTTGAAGACGAGACACCACCTTTTAC
AGTGCTGTTTCCTTCAGtgtggctgaaattttgtactATACCCTCTAGTA
TCgacaaaatataaataattctGTATCTCTCCCTCCTCCTTTGCAgagaa
tatattttcaaaattctcaatTGTTCCCAATAATCGAAAGCACTAAggcc
tttgattttattgaagaagTTCTTTTGTACGGATTCAATCTGTTCAATTT
GGTGGATGCTGTTTGGTGACCaaagctgagaacagtagtcgAGGTGAGGG
AAAACTAAGAATTTCCATAACGTTATCATAATATCACTGCTTCTGTTGTC
GAATGTTCTCAACAAGAAATGTCCTTAGCTTTTGCTATCATTTTATTGAT
GTGATCTGTAAATGAGCAGTCACTACTCATCCACACTCCAAGATCTTTGA
CagagtttttgttttcaattacaGTTTTGTTGTTAGTGAAATAGGttgat
aaactttttgattCAGTATCTTTACCGTATTTTAAATGTTCGAATTTACA
ACTATTTAGTTTCATGTTATTGTTCTCAGTCCAATCATAAACTATGTTGA
GATCATGTTGCAACTTGAACGTGTCAATTATTCCTTGGATTTCTTTAAGC
ATTCTAGTATCGTCAGCAAAGCTTGCAAGGATTGAATACCTGATAAATTA
TCATCAATATCAGAAATCATCAGAAGAAACAAAATTGGCCCAAGTACTGT
TCCTTGAGGTTTTCCTGGTATGACAGGGACACTGACGGATTTGAAGCCAT
TTAAAACAACAGATTGTTTTCTGCCTTTCAAAAACGATTCAATCCATCGC
AATAGCTTTCCTTTGATCCCGAGCTGAGACAATTTATGTAGCAAAATTGC
ATGATCAACTTTGTCGAATTCCTTACTGAAGTCCAAATAGATTGTGTCGA
CATTAATACCTCTCTCAAGGTATGATAGTAATTGTATCATAATGTTCAAG
GAGTTGACTCAAACAAGATCTACCTTGTCGAAAGCCATGTTGggagtcat
taaaaatgttattctcttctaccgggtgcaccaaaaaaaagtatacaggt
atGTCGNTTAAAAATGTTATTCTcttctaccgggtgcaccaaaaaaaagt
atacaggtatGTCAacatattgtgagcttcaggatttaaattttttgttc
attcttttttttatcgtatagaggatgctttaacttaaattttgagctat
catatattaaatttgaaaaagtagtttgaaagttattttaaaaaaactga
GTTTTTTTGGGATGAGccggagtttttacaagatacttcactaattggtc
atttgaagtgatagagatgacgagttctttagaaaaagtaacaaaattgt
tttattactggttaacgaccaaccaaatcaaataagagcttgtaaaaact
ccagcttgtcccgtttttttccatgtcgaaatttcaaaaaatcattaaaa
acagcaatcacgctataaataagacaaaatgtaaaaaaacacaattttat
tgtttttttttattctttcttttcttatttatatttcCCCGCAACagttt
ctccatcttatttgcacgtcatgaacattcccaaaacaagcaaactcaat
acagacccaagttctttgagcaactagtcgaggaatggtgatttattttt
taaaagtttttctcacATACcacacacataacatcaaaaccactcttgga
gatttccaaaactttttttcagctttttcaaaaatattatcctacatggg
aatagcttgttttaccatattctcaAATTCCATAacaagttttgatgaac
acagttgcattttttggtatttttatgtgcaAAGAAGataagtgtcaaga
gaaaagtttgctcgctgtttttgatgattttttgaaatttcgacattaaa
aaaaagtcagtttttttaaaataattttcgaactaccttttcaaacctaa
tgtatgatagctcaaaattcaaattaaagcatcctctatacaattaaaaa
agaatgaacaaaaaaattaaatcctgaagctcaatCTTGATGGATGACCG
TGAGATGAGTCATCTGGTTGTCGATAAATAACAGATATCAACATGTTTAA
TTTCTTGGAGTGAACAATTAGCAGTTCATTCACACCGTTTGAATACTGCA
ACACTGGTTTAAAGGTTGAACTTATGTCGTTTCTAATGTATAGTGCTACT
CCTCCACTAAACAGgcgcaattgcattatgggtatggaatcctgaaaaat
acaaaatattgttttgggaatggatttctagcaagtatttgatcaattga
atcacggttcagcacctgaattgcaattttacagtttcagtaagttgtga
GCAAGGGATCAATGTTTGTAGGTTACTTACTTGTGTTACTTGTGTAGTTG
TTTGAGCATCCTGCTTCAGGTAAGGTTCTTGGTGAACCACGCCTCCGTGT
GATCAATCTGTCGAGAGAAAAATAATCTcagcagatatttttcatgtcaa
ttattgaatttgaattagctCTCCTGCACCCAGTATATCCATGGATCTGG
GGTTCATCTGGGATAGACTTAAGGTGTGTGTCCAGGGCTCTTTTGAATTT
AtcgatagaaatatttttgaggtTTCTGATGCTCTTTGGCATAGCATTAA
AATGTTTTGCACCTTGCACTGCAAGTGTGCTGTctctaaattttgatgtt
tggttctTTGGAATTGACAGTGTACACATCCGGCCCAGCCGGGGGTTTTC
AGTGGTTTTGATACCATTTACAGTAGGTACAATCTTTTCCATCACCTTCA
AGACATACATTCTTCTATAGCGTTCTCTTCGCCTTTGAAGTGAGtaaatt
tttgtctgttttagacACTCCCAATAATTGTTTGGGGTGCCATTTATCTT
TCATAAGAAGGACTTTTGAATATCTTCAAGTCTCTGAATGAGACCAACTG
CATTTGGGCTCCACAGAACGGAGCAATATTCTAATATTGGTATCACCAAT
GATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAGTACGATCA
TACAATTTAAAGATCGTGAAGAAAAAGTTCTCAGGATCCAAGATGTTAAG
TTTTTAGCCTTTTCGATTACTGCAGTAATTTGCTTCTGAAATGTCTTTCA
CAACATCATTGTTTTCAATCTCAACACCAGACGGTGATGTATAGCTTGTT
TGAGTCTTGATCTCATGGTTCTTTCCATAGCGCAAGagttcaaattttat
atcatttagCTTAGCTTCATATTGTTGTCATCCGTCCATTTATATATTCT
ATCAAGATCGTTTTGAAGTAGGAcaggttttaaggtgtattagtgtaggt
tttaaggtgtaatttgattttaacgtacagttttgaaaatatttaccaAT
GATCTAATTTTAGCGTTAGTAACTTttcagtgaatcactgttcaaaattt
gagaccaaaaggactattttataaaaagttgttcaagaaaaccattttgt
aggttttaaggggtaaatcgctaaaattgcattttttcacaaagcaataa
aatttttcttagcagcttttacaaaataccatagccagggaagaaattca
taggtagcctagactcaccagaaaaagtttcagcccttactgttttctct
atcaggatatagggggtacctttttttgttgtaggttttaggggtatcca
ctggtatagGAAAGGGTCGGATATTATCTTGgttatgttttgaaatttaa
ttcttctgtaaaacaatgaaatgtgTGATTGAAGTAAAGATGGTGGGTGA
AGCGAAGGATGGAATTGGATAAAATTCCAACAAGTTTACAACTTTCCAAC
TCAAAATAGTCGGAAAATTAGGAGTCGGTCGGACAATGCGAACACAAGTT
ATATTTGTGATTGTGGCCTATAATGTCGAAACCCCACCCTCTTCAAATTT
CAACACCTTTTTTATTTAAGAGTTGGGAATAATAGGAGGGTCCAAATCGC
TGGTTGAAActatatttctttgcttagccATCAGAGagaagaaaatcttt
tgtttatcAGCGATTCCAACCTTTCTTGGTATTATtcacatcttttataa
gcaaccatgtgcttataaaaattgaaagttccGACTTTGGGCCCCTTGGc
taaacccgacttttcttaaattttgggaagcttaggctttcaagagtcaa
gaaattggatttagctgtttttacgacccttcttttttttttgggggggg
ggctggaattAAAGTTTGTGATTTACAACTCTTCATAGCATAATTCTGAA
CGTGCAAAAAGgtgcattctttttgctatctcagtgaaaaacccttattc
aatattcgacactctaaaatcttttgtttttgaacAAAAGTGACGTCGAA
AAAAAAGACTTCTAGATTGtaaatttaataataataataaagctttacag
gtttgcaggccaccgtgaagacacatgggcctctataaaccgttcgtact
ttttacaatgatcttttttaAATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNttttccgtcacggcgcaaCGCAAACTTT
AAAGTACACTAAAAAATTACcttggtgttttagagtgaaTTCTTTTAGTG
ATTCTCAACAGTCCTATAAGTCTAATAttgtaaacatttaaaaactgaaa
aaattctgctttgttcaattttatttagaaattatgattttccgtcacgg
cgcaaCAGAATTTTAGACCCCAAAAAAACTCCATTGGACATCTGAAATGA
TTTAATTTCTTCAGTAACttcaaaattatcaatatttaaaaacatttggt
aAGGTAAACTACTTTGTAGCCTTTATATGCTCATTATGTTCATACATAAT
CAGACATAATGAACCTGCTGGAAAATTGCTCACCTGGACCCCCGAAGAAG
ATCGACGTGTTGGTAGACCGAACATCACCCTGCGACAAATCCTTGAAGAT
GACACTGGACTCAGTGGCAAAGACCTCGTTACAGCCATGTCCGATCGTGA
AAAATGGAGAAAAGACTTTGTATACTTCACCTAACGGATGCATCAAGTAC
AAGTAATATGctcattttgtaaaaatcttaatttttgtgAGCTTTCCAGg
gattttagcctggaaatcgGGAATCTGGTCATAACTTTTCAATGGAGCAT
GTTCCTGCTCTGATTTTTTCACATATTGCTCATGAAATGATATTCTTTAT
gtctaaataaaattttttgacattttgaaaacttcattttttgccatttt
tcagattttttgggacgagctttttgcttattgctacgtcttgtgctttc
aaatggtttatttcttcgtcctgccttttcattatattctcacaggcttt
gatttcgtttttgaatccttcaatttttgatgtttcatttgaattatacc
tttccattacctgtggtgcgattttggtacagttttgACACTGGAAACTT
CTTGATTTGTATGACAAGCATATCTGCATCTGGTAAAGTGGCAGTTCTGA
ACAAAGATAATGGACTAAACGGTGGCACTTCCTGCATTGTAGGGTATCTT
TTAGtgcgttttcttcatttatgatgcactttGACAGGCTGCAAAAGTCG
TTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAA
GTCgtttattgatggtgatttttgattattttcttgaattttttccgcca
tctttgtgcatttttcagacgacaaccgttcagttttgtatttgacgtca
acaatttattttatagattcggactattatACTGTCGGAccagaaagtgt
cggactagtgacatgctgACGACCCCCCTGCTGCATGCCTGGACTGGAAT
CAATCGATTGGTTTATCGATTGTTTGTGGGAAGGGAAGGAAGAGAGTCTG
GATTAAAATACACTCAATGTCAGAAAGcctatttcaaatttaaattcaaa
CACTTACATTAAATTTACCTGATCTGCTGATGGTTCTGgttttatttgaa
tatttgtCGTACCTGGTAATTGCAAGTTCCATGcttttgatttaactttc
tCATCAACAGGTAAGAATTGTGATTTTGAATGTCTTTTTATTGAACTTGA
CTGTAAGATGCTTGTAGGGGTAGTATATAGACATCCTGAtaacaaaatac
aaattttcaatgATGAGTTTGAGAAAAGAGTTcttgaaagaataaaaaat
gaagataagAAGGTTATTATTATGGGAGATTACAATATAAATTTAATGAA
CTGTGAATCTCATCGTCACACAAGTAATTTCTTTGACAAGATGgtttcat
ttaattttcttcCATACATAATCCAACCAACTAGATTTAATGGTAACTCT
CACACTCTTATcgacaatattttttataacgACATTTCCAATGAATGTAT
CAGTGGTAACTTAATTCCTCATATCACTGATCATTTGCCAAATTTCCTTT
TTGTACCTCATTCTGATAATAAAAtaacacaaaaatttaaaaaaatatca
aaaagagaCTTCTCTGATTTTGATATCTTACGCTTTAGGgaagatctttc
aaatattGACTTCACCAACAAATTCCTTCAGATGGAAGATGCTAACCTAA
TGTATGAATTTTTTCATAAAGGCATGAATCTTTTATTTGACATACATGCC
CCATTTAAActattgacaaaaaatcaaagaagaaaagaaaaaaacccctG
GATGACCAATAAGATTCTtaacaaaataaatataaaagatGCACTATATG
GGCAGTTTATGAAAGACAAAGACcaacaaattttcaaagaatatcaTGAG
ATCTTGCGAGAGTTAAACAAAGACATACGTAAAGCAAAATTCATCTACCT
CAAAAACAAATTTACACAATCAAAGaatgacatcaaaaaattttggaaaa
atatcaaCACCTTCCTTGGTAGAAATAAGACCAATCATTACCCAAGAACT
ATGACTCATCAAGATAAAACATTTACTGACTCTCATCAGATTAGTGAAGC
TTTTAATAAATACTTTTCAGAGGTTGCTCCAAATCTTctcaaaaaaattc
ctaaaaacaCAACTCTTAAACACAAAAACTACCTTACTAGGATGCAGTAT
AACAACTCTAGCTTCTTTTTCCAACGAACCAATAGGTATGAAGTCTTAAC
ACACCTTAACAACATAAACAGTAATAAAGCCAAGGATATTTATGATTTCC
CTACACGGATTATCAAAGGTATTGCTGATCTACTAGCTGATCCTCTTGCT
ATTATGATAAACAACTCCCTATCCACAGGTGTTTTCCCTGAACTTTTAAA
ACATGCTAAAGTAACTCCTCTCTTCAAAAGTGGACTTAGAAATGATATAA
AAAACTACAGGCCAATATCTGTTCTCCCAATTTTTGACaagatctttgaa
aaaattgttcATGAAAGAATAACTAAATTTC Coding sequence (CDS) from alignment at scaffold_222:282130..292810+ >TCONS_00052906 ID=TCONS_00052906|Name=TCONS_00052906|organism=Clytia hemisphaerica|type=CDS|length=1323bp|location=Sequence derived from alignment at scaffold_222:282130..292810+ (Clytia hemisphaerica)
ATGCTTGTAGGGGTAGTATATAGACATCCTGAtaacaaaatacaaatttt
caatgATGAGTTTGAGAAAAGAGTTcttgaaagaataaaaaatgaagata
agAAGGTTATTATTATGGGAGATTACAATATAAATTTAATGAACTGTGAA
TCTCATCGTCACACAAGTAATTTCTTTGACAAGATGgtttcatttaattt
tcttcCATACATAATCCAACCAACTAGATTTAATGGTAACTCTCACACTC
TTATcgacaatattttttataacgACATTTCCAATGAATGTATCAGTGGT
AACTTAATTCCTCATATCACTGATCATTTGCCAAATTTCCTTTTTGTACC
TCATTCTGATAATAAAAtaacacaaaaatttaaaaaaatatcaaaaagag
aCTTCTCTGATTTTGATATCTTACGCTTTAGGgaagatctttcaaatatt
GACTTCACCAACAAATTCCTTCAGATGGAAGATGCTAACCTAATGTATGA
ATTTTTTCATAAAGGCATGAATCTTTTATTTGACATACATGCCCCATTTA
AActattgacaaaaaatcaaagaagaaaagaaaaaaacccctGGATGACC
AATAAGATTCTtaacaaaataaatataaaagatGCACTATATGGGCAGTT
TATGAAAGACAAAGACcaacaaattttcaaagaatatcaTGAGATCTTGC
GAGAGTTAAACAAAGACATACGTAAAGCAAAATTCATCTACCTCAAAAAC
AAATTTACACAATCAAAGaatgacatcaaaaaattttggaaaaatatcaa
CACCTTCCTTGGTAGAAATAAGACCAATCATTACCCAAGAACTATGACTC
ATCAAGATAAAACATTTACTGACTCTCATCAGATTAGTGAAGCTTTTAAT
AAATACTTTTCAGAGGTTGCTCCAAATCTTctcaaaaaaattcctaaaaa
caCAACTCTTAAACACAAAAACTACCTTACTAGGATGCAGTATAACAACT
CTAGCTTCTTTTTCCAACGAACCAATAGGTATGAAGTCTTAACACACCTT
AACAACATAAACAGTAATAAAGCCAAGGATATTTATGATTTCCCTACACG
GATTATCAAAGGTATTGCTGATCTACTAGCTGATCCTCTTGCTATTATGA
TAAACAACTCCCTATCCACAGGTGTTTTCCCTGAACTTTTAAAACATGCT
AAAGTAACTCCTCTCTTCAAAAGTGGACTTAGAAATGATATAAAAAACTA
CAGGCCAATATCTGTTCTCCCAATTTTTGACaagatctttgaaaaaattg
ttcATGAAAGAATAACTAAATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052906-exon-scaffold_222-1491911889:282130..283084 | TCONS_00052906-exon-scaffold_222-1491911889:282130..283084 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1510915933:282130..283084 | TCONS_00052906-exon-scaffold_222-1510915933:282130..283084 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1575043694:282130..283084 | TCONS_00052906-exon-scaffold_222-1575043694:282130..283084 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1491911889:283289..283366 | TCONS_00052906-exon-scaffold_222-1491911889:283289..283366 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1510915933:283289..283366 | TCONS_00052906-exon-scaffold_222-1510915933:283289..283366 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1575043694:283289..283366 | TCONS_00052906-exon-scaffold_222-1575043694:283289..283366 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1491911889:291146..292810 | TCONS_00052906-exon-scaffold_222-1491911889:291146..292810 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1510915933:291146..292810 | TCONS_00052906-exon-scaffold_222-1510915933:291146..292810 | Clytia hemisphaerica | exon |
| TCONS_00052906-exon-scaffold_222-1575043694:291146..292810 | TCONS_00052906-exon-scaffold_222-1575043694:291146..292810 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_222 | supercontig | scaffold_222:282130..292810 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR005135 | Endo/exonuclease/phosphatase |
Blast
The following BLAST results are available for this feature:
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