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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052873 ID=TCONS_00052873|Name=TCONS_00052873|organism=Clytia hemisphaerica|type=transcript|length=906bp
ATAGCAATTCAAAATCAACGTTTGGTAAATAGTGAAGTAAACTATTCGAG
AAACTATTCTAACTTTCTGAGATTTTACCAGCATTTTGGTTTCCAAAACT
TATAACCTTCAAAGTAAAGGACatctaaagatatttccaatGTGTGGAGA
AGTGAAGCCCTTTTATATTGATCCAATTGTTGGAAATAGAAAAGTGCCAA
CAGGAATTTTTTAAAGAGCTCTGATAAGAAATCCTATTAAAATCagcttg
aaaaagaaatataactACAAAAATAACTTCAGTTTTAGAACCAttggaaa
taaaaaatatttcagtctTATATTCGTGGATTTAAGGATTAAAATCTTCT
ATCGATCTGGATTTTTAAAACACTGAAAAGATAAGTGAAAAAATTCATGC
AAAACAAggtcatttttatcttcaattttttcaaatacgtaatcacaccc
ccttctcacagacccggtaggattttttcagccggtGATAAaagtaacgg
actgaaactcgatggagatattcccatatttcttagggctggggatttca
attcttttgttttcaagtcagaaaattcagtggggatgggaaaaatagca
taatgttttgcagtgaggattggtttatttgattattttcagtgtgagaa
aggggtgtgtaATCTAAGATGTAAAACAACATTCAAGACAGAAGATCTGC
TTGACACCACTTTCTCAATGACTGGTGAGAGCTTTTTAATTTCAGATTCT
ATTGAAacgagcacctcaccaaaaagcgggatttttcatctcgtttcttg
gTGAGTTTGACACTTTGACAATTTTCTGAAAACCGAGGCCTTTCAAGTGT
CCTGAcggaaattcgattttttcttacttacgtcaaaaatcgaatgtttg
gagccc Run BLAST on NCBI transcript from alignment at scaffold_220:61498..62403 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052873 ID=TCONS_00052873|Name=TCONS_00052873|organism=Clytia hemisphaerica|type=transcript|length=906bp|location=Sequence derived from alignment at scaffold_220:61498..62403 (Clytia hemisphaerica)
gggctccaaacattcgatttttgacgtaagtaagaaaaaatcgaatttcc
gTCAGGACACTTGAAAGGCCTCGGTTTTCAGAAAATTGTCAAAGTGTCAA
ACTCAccaagaaacgagatgaaaaatcccgctttttggtgaggtgctcgt
TTCAATAGAATCTGAAATTAAAAAGCTCTCACCAGTCATTGAGAAAGTGG
TGTCAAGCAGATCTTCTGTCTTGAATGTTGTTTTACATCTTAGATtacac
acccctttctcacactgaaaataatcaaataaaccaatcctcactgcaaa
acattatgctatttttcccatccccactgaattttctgacttgaaaacaa
aagaattgaaatccccagccctaagaaatatgggaatatctccatcgagt
ttcagtccgttacttTTATCaccggctgaaaaaatcctaccgggtctgtg
agaagggggtgtgattacgtatttgaaaaaattgaagataaaaatgaccT
TGTTTTGCATGAATTTTTTCACTTATCTTTTCAGTGTTTTAAAAATCCAG
ATCGATAGAAGATTTTAATCCTTAAATCCACGAATATAagactgaaatat
tttttatttccaaTGGTTCTAAAACTGAAGTTATTTTTGTagttatattt
ctttttcaagctGATTTTAATAGGATTTCTTATCAGAGCTCTTTAAAAAA
TTCCTGTTGGCACTTTTCTATTTCCAACAATTGGATCAATATAAAAGGGC
TTCACTTCTCCACACattggaaatatctttagatGTCCTTTACTTTGAAG
GTTATAAGTTTTGGAAACCAAAATGCTGGTAAAATCTCAGAAAGTTAGAA
TAGTTTCTCGAATAGTTTACTTCACTATTTACCAAACGTTGATTTTGAAT
TGCTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052873-exon-scaffold_220-1491911889:61498..62403 | TCONS_00052873-exon-scaffold_220-1491911889:61498..62403 | Clytia hemisphaerica | exon |
| TCONS_00052873-exon-scaffold_220-1510915933:61498..62403 | TCONS_00052873-exon-scaffold_220-1510915933:61498..62403 | Clytia hemisphaerica | exon |
| TCONS_00052873-exon-scaffold_220-1575043694:61498..62403 | TCONS_00052873-exon-scaffold_220-1575043694:61498..62403 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_220 | supercontig | scaffold_220:61498..62403 . |
Blast
The following BLAST results are available for this feature:
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