TCONS_00052855 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052855
Unique NameTCONS_00052855
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2116

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052855 ID=TCONS_00052855|Name=TCONS_00052855|organism=Clytia hemisphaerica|type=transcript|length=2116bp
cagattttgaCTGAGTCGAATGTGAATTGACAACCTTAAATACATAAATT
AAATAAATGatggaaaaacttttcaaactaATTATCTTGGTGACTATTTG
GAAAGTGCACCATGGTCAAATTCTACAAGTTCCATCCAACATCACTGGCA
TGTTCAAGCAATCTGTCACCTTTGATATCATTGTAGACTTTGGAAACAAT
AATACCGAATCTGGCGGAAAAATCAAGTCATTGATTGTGGAACATCGAAT
ATCTACCGATATCATCTTTAGGATTGCAGATGGATCTGATACAGGATTTA
CGCCTAAGGACGCCTCAAGATTTAAAGGGCGTATTACGACAGCCTTTAAT
TCCACGGCAGGGAAGTTTTCATTGACTCTTGGTAACTTGAACTATGATGA
TGATATCAAAATACACATACTTCTGGTTTATACAGAACTACCGTCAAACC
ATAAGGTCACTGAAGCTGACATTGATCTAATAGTCAAAGGTGGTCCAACA
CTATGTGGAAACGAGGTTCCATCCGCACCAAAATTCGATCTCGCCAAACC
AATTAATATCCCGTTAACGTTGTGCGGCAACCCGCAACCGCGGCTAACGT
ACAAATTCGGGTCAAACCCTGACATAATTGAAGTAACAAACATCACCATT
AGTGAGACCAATCAACACCAGTATACTTACACCATGCAATTGACAGATTT
GAAACCCAGTGATTGTAATTCGATTTTGAGGTTCTTAGCAACAGGTGTTG
GTGATGATTATCAAGGAGAAAGTATCATCGATCTCGATTTTACACCTGAA
CTGACATCCGTAACACCTATACGTCAAAACAACCAACTCATCACAACATG
GACGCCCATCAATACGGGCGGGTGTCCCAAAGCGACGTACGAAATCGAAT
ATTTCTTAAATGACGGTAACAAGACGAACATTACAGTAACGATACCTGCC
GGTAGCAGCGGCTACACACATACGGTAACCGACATTAATGACGTCATAGA
TATTGGTTCTATTACTCTACAAGCGACCTATCGAACATTTAAATCGACCG
TGGTACGAAAAAACGTGACACACATCGTAACGACAGCAGCTCCTTCCACG
ACTACTCCAACAAGTACTAAAACTCCGAAAGGAGGATCTGTCCAAGGTGA
CCAATCGAACGATGAAGATGTGGTATTAATTGCTGCAGTTGTTGGCAGTG
TTGGTTTTATCATCATATTAATTGTCGTTGTTTTGGTGTTTTGTGTTTGT
TCTCGAAAGAAAGACAAAGCACACAATTTGCAAATGAATTCCATTTACGA
ATATGACCAAAAAGCAGCACCAATTAAATCACCAAAGAAACCAAAAAATA
ACCCAATGTATGACATTGAACCTCCAACACATCATAGTTTCTCTAATGGA
GGAGTCACTATCGAACGTGAGGACCCTGCATCTGGCTCTCCAACTAACGA
CGACGTCGTCGATACCAACAGCCATACCCAGACACATACACCAAGCAAAG
CTTCAAGTGTGCGTGTANACGACGTCGTCGACGCCAACAGCCATACCCAG
ACACATACACCAAGCAAAGCTTCAAGTGTGCGTGTAGCAGACGCGCAACT
CAAATTTTACGATCCAAATGAATTCGGAATGACCGAAAACTCTGATGAAA
ATGAGAATACTGATAGACTCTCCCCTCCGGTATCCCCGGCCCCTCGACCA
GGGGATAATTATTCGTACGATAATACGGGAGAGACAACCGGCCGAGCACC
CGAATTAGTATAATATACCTGGCAGACAAAAATCTTTATTATGATGTTTT
AGAGTGTTTATCGCGTTGCATCAATTTTACAATGTATTTTTTAAGCCAGC
AGGCCAGCACTCTCCAAAATAATTAATCATTTATCGTGATATGGAGAAGA
TGTGAACAATGGAATGAAAAGATTACaccttgagttttcaaaatttacat
taaataatttttgctGGAGTCCTTTGTTAGAGCTAAAAAACTTCTAAATT
GTCACTCATCAGGTGACTTAAAACCTTCCGTGGATTATCcaaattacaag
aaaaatatatgCACTCAAATTATCATGggttttataaaaagaaaagcatt
CGAAAGTTCACCGTAC
Run BLAST on NCBI

transcript from alignment at scaffold_220:400348..410790-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052855 ID=TCONS_00052855|Name=TCONS_00052855|organism=Clytia hemisphaerica|type=transcript|length=10443bp|location=Sequence derived from alignment at scaffold_220:400348..410790- (Clytia hemisphaerica)
CAGATTTTGACTGAGTCGAATGTGAATTGACAACCTTAAATACATAAATT
GTAAGACATTGATTTTGAGGTATATCGGAGTATATATTACGTTTAGAATG
TTTTTATTTCGTTCATTATAAATATTCATTCAGTTGACTCTCTCAGAATC
GATATTCATGAACGGGACAGAAAATTTTCTTCGAGTTAGATAAAGAGTCG
AAATATATTATAAGGGGAGCTAGCTGTTAAAGGGTTTGTTAATCATGTCA
GTGGATGCGCTGGCATATCACGTATCAACGTCCAACTAACGTTAGAGAGA
CGTTCTGGGCGTTACCATTATAACCTAAAAAAATAGACTTTTTAATAATT
TTTTTCTTCTTGCAGAAATAAATGATGGAAAAACTTTTCAAACTAATTAT
CTTGGTGACTATTTGGAAAGGTATGCATGAATTTATACACCCCTGTGTCG
CAGACCCACTGGGATCCCCACTGAAAAATTTGGCAAAAATTTGGTCTCCA
ATGGGAAAATGACTTTGATTTATCAAAATTGATAAAATTGCACTTCAAAC
CCATCCCCACTGGATTTTTTAACCTTGAAACAATAAAATTTCTATCCCCA
TTGGGATTCCGATAGGGATTTTTATCCCCACTGAAGAAAAAGTTCCACTG
GGGCTGTGAGACAGGGGTGTATTTATTTACACAGTTAAACTTGCTACCAG
TATAAATCTGAAATGCTTGGATCCTTTTGCTAGAAACCCTGATATTCATG
ACGTAATGTTTTATACGGAAGCACCCAAAAAAGACCCGGTGTCTGCCACT
TGAATGTAAACAATAAAACTAGTGACAAAGGTCCGGGCTAATTATCCACT
TAATATTTCAATTCGCAAAATAGTGTTCAACCATAAAAAGTTGATTACTG
CAATGACGTGGAATAATAACATGTAAAGTACTAAAAACACGAATCCTATG
AAAAAAGGCTATTAATGAGTGGGTCAGAAAAAACACAACGGAAATTGAAA
TGTCTATAAAAGTTTGTAGTAAACCATACTCCGTATAAAAAAACCCGGTC
TGGAAGCCTTTTGTTTCTTTCCGTTGTTTCTTACTTGAACTTGCGTTGAG
AAATTAGTTTTTTTGGCTCACTTTTTGATCATCAAGGAAAAAGCTAGCAA
AAAGTTAAAACAGTTTAAAGACCAGTGTTTTGATAAGGACTATGAGTGAA
CCCATTCCAAGTCATTTTGGTATTTCTCTTCTTGTTTCAGTGCACCATGG
TCAAATTCTACAAGTTCCATCCAACATCACTGGCATGTTCAAGCAATCTG
TCACCTTTGATATCATTGTAGACTTTGGAAACAATAATACCGAATCTGGC
GGAAAAATCAAGTCATTGATTGTGGAACATCGAATATCTACCGATATCAT
CTTTAGGATTGCAGATGGATCTGATACAGGATTTACGGTATGGCTTAGTG
TTAAAATTTATTTCGTCTCTGGATTGTCTCAATAAAATCTCAATAAAATT
CTGCATAATTCTCTAAAAGTTTTAGACTATGCTATAGAAAAAGCACAAAG
CCGAAGAAAATTCGCAAACGGTTTTTTTTGTTGCCAGCCGTTTCTTCGAA
ACTCTCCCGATTTTTTTTCCGTATACCGCCATAACGCCATATTTTCCCGA
CTTTACTATCACTGTATGTAACGGACGATAACATCGTCTATAGAATTTAA
AGAAAAAATGCTAATTTGCTCCGCGTAAAATCCATTTTTCGTCTCTGACA
AATAACGTTGCTTTGGCCACTGGGTACTAGCATTTTTCAATACATTATCA
ACTCGCTTCGAATTTCTACATAAAATGCGAGAATTCGAGTTTTACCAGGG
CAGAACAACGCCAAATATCAGCTGTCACAAAAGCAGACGTCTCTCAGCCC
TCGCAGAATGAAACCCAAACCTTTTAAAATAGCTAAAGGCTCAAAACCTA
TCTAACAACAAACGTACCTGCCAACTATGCCAATTTAATACCCCTTTTTT
TTGTAAAAATTGAATTTGTTTCCAACATTTATTTTTAGCCTAAGGACGCC
TCAAGATTTAAAGGGCGTATTACGACAGCCTTTAATTCCACGGCAGGGAA
GTTTTCATTGACTCTTGGTAACTTGAACTATGATGATGATATCAAAATAC
ACATACTTCTGGTTTATACAGAACTACCGTCAAACCATAAGGTCACTGAA
GCTGACATTGATCTAATAGTCAAAGGTAAGTGAGTGGACTCCAAGATGAA
TGTTCTTAAACTCTTTATAAGGTATCTAAGGCCTGGTTTAGACGGCATAC
TTTTCGGCAGTCAATGCATTACCCTCTTTTGACGTCAATGTAATGGCTTA
TTTCAATCTTTTCCAAACAAAGATTTTAGTTGCCAAATCTCTGCCCACTT
TTTATCACCTTTAACAATTAGAATAGGCTGGGCAGGAAGTCGGCCGTCTA
AACTAGAGTTAATAGACTTTGGCCCTTATTTGAGGAAACTTCGTGTATGG
AAATCGTTTTAAACTGGTCCAAAATTCACTTGTTTGTACAAAGACAGTTC
AGCAATTTGCTTTCGCAAAAAATATATAACCCGAGGGCTTGAGTTTCTAA
ATGAACAAAACTTTTGGGCAATATCTTGAGAGTCATTACATACCTTAGGT
GGATTAATTTCGCGTCGACTTAATTCGCGAATTTTAAAAAAATCCACCAT
GAGTGGTCCTAAATCCGACAGCCCTGCCTAATTCCGATGGGGTCTTTCAA
AGATACAAACTAAAATAAAAACAAACCTTTCGCTGTGACGCAACGAAGAT
ACCAAAGTGTCAACTAAACTGAAAGATTTGATAGTACTGAAACGAATAAC
GAGTAACATTTGTTAACGTTTTAAACACGAACAACGGATTCAGAAAAAAA
GGTAATTAGTATAAAGAGGTAATTATTTTTACAACTCCCACTTTTTTTAT
CACATTAATTGATATCTTGACATAAAATAGTCATATTGTAGATGTTTTGT
TTTGAGAGTTCTTGCAATAGTTTATTGTTTAACTTGGAGAGGGAATGTTG
TAAACATAGAATTTTTTTTCATAACAGTTATTTGGGGGGGGGTCGGAATT
AGGCAGGGCTGTCGGATTTAGGACCAATCACGGTAACATTTTCTCGTGGA
TCAAAGCTTGCGAATGATCCCATTTTTTGCCCAATTTCTTTAATATTTCT
CGGAAGTTTTGGAAAAAATTCAGATTTTAAAAATTTTTCGCGACCACAAA
ATTTTCGACAATCGCAAAAATTATTCCGCGCCAAATTGTATCCACTTAAT
GTTATCCTTTCTAATTACTTTCACAGGTGGTCCAACACTATGTGGAAACG
AGGTTCCATCCGCACCAAAATTCGATCTCGCCAAACCAATTAATATCCCG
TTAACGTTGTGCGGCAACCCGCAACCGCGGCTAACGTACAAATTCGGGTC
AAACCCTGACATAATTGAAGTAACAAACATCACCATTAGTGAGACCAATC
AACACCAGTATACTTACACCATGCAATTGACAGATTTGAAACCCAGTGAT
TGTAATTCGATTTTGAGGTTCTTAGCAACAGGTGTTGGTGATGATTATCA
AGGAGAAAGTATCATCGATCTCGATTGTAAGTTTATCTCTTTACAATGTA
AACGTTGTTTCAACGTCCATTTAACGTCCATGGCGTTTATCACGTTAGAT
GAACGTTGACATCACGTACACGTTTTTTTATAAGAACAAACTATATAAGA
ACATAAGGCTCGATGGCCAAAATGTTAAGAACATGTTAAGAACATTTTAA
GTCTTTGTAGACTCGAAAATACCCTGTTCCTTAGGAAAATGGTCAGAAAT
ACTCACAAAATGGTTAAAATTAGAACATATTAAGAACATTTTTAGGCTTA
AAACTCAAAAAATTAAGACCATCCGAAGGTTTCAAAAATTTTGGATGTTC
TTACAAAAAACCGTGTAGTAAGACCCATACATAGGCTGTTTGGGAGAGAT
TTTAAAGCATCATTGGTAGTTTTATAATATTGCTGAAAGTGATATTTCAT
ATTAGGCCCCTAAACTATTTTAAGATAGTAGGATAGCATAAAATAAGTTG
AGTTTTAAGATTTTCCAAGCTAAATGGTAATTTAACGGATTTTCCTAGCT
AAATGGTAATTTAACGGATTTTCCGAGCTAAATGGTAATTTAACGGATTT
TCCTAGCTAAATGGTAATTTAACGGATTTTCCAAGCTAAATGGTAATTTA
ACGGATTTTCCAAGCTAAATGGAAATTTAACGGATTTTCTTAGCTAAATA
TAGAAATTTATTTAAAGGACATAATTCGTTTGGGAAGTTGGGAGCCCACC
CCTGATATTGAAAATATGTCGGCCTTTTTGACTATCTATAGGCGTTGAAA
ATTCCCATTTGCATCGATCAGGAAAAATACATGTAGCGCTACGGACGTTT
GCATCTTTCGTGATTTAGTTGCTTCCCGCTATCAAAGATGTTTTAAAATT
TGTGGTTTCTAGCAAGAAAATTCTTTCTAACTGATTTTGTTTTTGATGGC
ATGTTATCTTTTTACGTGATATAGTTTTTAACAAAAGAAAAAGCCATTGT
GGTTAAATAAACCTCTTGTGATTTTTAACGTTTTACTCACCCTGGTAAAC
GAATGGGTCTCATCCTCTAGCGAAAAGGTTTTCTTTTATAGGAAATTTAT
CTATAGAGGTCTGCGATTCAGACTAGAAAAAGAATGGGCGTAATAGTATG
GCGCAATGCAACGTCTTCAAATAATTGATCCCCATAAAATCGAAGTCGCT
GTACACTTGTTAGGCATGTAGATTTAGAACGCTATGGTGTATAGCCAATA
GGAGCAGTCCTGTTTTGATACTAGCGAGTTTATAATGTGTTTTTTTTTCT
GTGACTGGGACGGTTAGCTTATGATTTGATTAGATCCTGAATGATTGAGA
ACGACTGTAAATAAGCACTTTACCGTACTCGATTTGATAAGTTATGTCCA
AATCGCTTCAGTCACTCCGCCGTCCTCAAAAATACAAATATACGCTATTG
AACGAGCTGAACGGACATTTTTAAACCGGTGTCACGGTAAATTAAGACCC
GGGAGATTAGAACTTTAAAGTCCTGATTTTCGGAAAATATAGACCCTTCG
AGTCCTAAATGCCTGGCAAATTAAGATCGAGGAGGGAAATTAGGACTCAG
TAAAAATGTTTCAATTCTATTTTGTTATAAGAAATAATTTCACGAAAGAC
TTGAATAAAGGGCTTTTTGCACCATTCTAGTGGATAGTATGGATTTAGTA
GAGGTCGATTAATTCTTATTCCATTTACACATTGCAAATTTATTCCATAT
AAGTTAAACCCCTTAAAGACTTTCCTTCCTTAAACCGCGAAAATTACGAA
ATGAATTTTGTCGATATTATTCGATATTAGTTTTTTTTAGACTTTAAATT
AGATTTTAATTAGCGAAGTCATGTTTCACCGGAAAAAAAGGACTCTTCTA
CCTTAAAAACGAAGTTTAGTTTGAGTCTTATTTTTCAGTATCGATCTAAA
TGTCCCAGGAAATCAGGATTTGAAGTCCTAATCTCCTGGAGTCTTAATTT
ACCGCTACAGGTCGGTCTCCCTTTCTTTTTCGACTTTTAACACTTTCTTT
CCTGTGGTAGGTGGATGGAGGAGCAACTTACTACAGCAATCACCTTTTTA
TTTCAGCACTCGTTTTCCGAATTGATATTCAAGGTTTTCAAAGACAACAG
CAAAGAGTTTTTAAATTCCCAAGACAATTAAATTAACAAAAAAATCATTT
GTAAGGCTGTAACGTCTTCCTCGAAAGGAAATCTGCACAGATTTGTGCAT
GTCCCAAATAAACGTCTCTCCCCGGTTATTATAATATATAATGCATAATT
TTTTGGACAGCCCCACCCTCGTTCTTATTAGGAACCCCCTTTAATTATCA
TTATTTTTAATTTAATTTCTAATTTTTCTCAACTGCCTTGATTTAGTCTA
TTATTACTTTATTTTGGGGGGTTTTTAGAGGTACAATTTCCAACCCCCGG
CAATTAGGCCCCAGCGTTTATTATATTTTGAAGAAATTTCGCCCCCCCCC
CTTTATATTTGAGACCTTCAAGTAGGCTAATTACCACCTTTTGTGCATAC
AGACTACTTACAACCAAGAAAGTTTTATTAAAGTTCCTTGCTACAACACT
GAACCCACTGAATAACTCTACATGACTTTTTAGTTACACCTGAACTGACA
TCCGTAACACCTATACGTCAAAACAACCAACTCATCACAACATGGACGCC
CATCAATACGGGCGGGTGTCCCAAAGCGACGTACGAAATCGAATATTTCT
TAAATGACGGTAACAAGACGAACATTACAGTAACGATACCTGCCGGTAGC
AGCGGCTACACACATACGGTAACCGACATTAATGACGTCATAGATATTGG
TTCTATTACTCTACAAGCGACCTATCGAACATTTAAATCGACCGTGGTAC
GAAAAAACGTGACACACATCGTAACGACAGCAGCTCCTTCCACGACTACT
CCAACAAGTACTAAAACTCCGAAAGGAGGATCTGTCCAAGGTTAGACTTT
AAGTTTGACTTATACAATCATTGACAAAACATTTGAGACAAAGGGAATTT
CCCTGCGAATGACTTTTAAGTACAGTTTTCCAACTACATTCGGAAAGTTG
AGTTTTAACATGAAACTTAATACCTTAGGATCTCAGAATTTAAAAGCTCA
AATTTGCTCCAATAAGGCTTGGAATATAGCCTAGAAGCCGCCGAACCCTC
CAAAATCAAAATATTCAATGAAAGAAAAGTGGAAGTGCAATTCTCGCCCG
AACTTTAATTTCTGAAAGACGTTAAAATACACTGAAATCTCAATATATTT
CGACCATGATTGTAAAAGAGGTTTTCATACCTTTCGTGAGTTATTTTAGA
ATCAAGAAAAGAACAAACTAAGTACTGGGTTCGAGTTTGACCCTTTTCTT
CTTTTTCTTCCCAATAGGTGACCAATCGAACGATGAAGATGTGGTATTAA
TTGCTGCAGTTGTTGGCAGTGTTGGTTTTATCATCATATTAATTGTCGTT
GTTTTGGTGTTTTGTGTTTGTTCTCGAAAGAGTAAGTCATCCTCCTTCAA
TATCAACTACTATAGTAAGTGCTACTTAAACCTTAAACCTACTTTATTAT
AAAAGCAACCTCGGTCCCAGGGGATAATAACATTTGTTGGGAGGGCAGTT
TCTTTTTCTCTTATACGTTCCTAGCTAAATTCGTATGATTTGGATAAATT
TTTTGAGGACCATGACAACACCATGATAGTTCAGGAAAAAAACTCAAAAA
AGGCCTTCATCTTGAAATTAAATATATCCAAGTCAGCTTTCAGATCAATG
ATTCTTATTTTAGCTAAGTCAGCAAAACGTTTAACCCAAATATTTCGTGA
CCTAGTCTTCGAAACTCTATAAACCATACCATTTTTGGGGATTCAAAAGT
TAGGAGTTTTTTAGTTTTTACCGCATAGAAGTTTACAAGCCGTAGGTTGT
TATGCATTTTGAATGGAATATTGGAGTATCGCTATACTTGTGATAATAAA
ACGATAGACCTTATCGGAGTTTTTGATTTTTCTAAAAAAGCGATGCATTG
TGGGATTGTTTTTGGAGTATTACAATAAAATTCCCTCGAGGAATTCCTAA
GAGATTTCTATTGTAATACTCCCGAAACAATCCCACAATGCATCGCTTTT
TTAGAAAAATCAAAAACTCCGATAAGATCTATTATTAACAAACAAACATC
TTTGAAATAGTGCTTAGAAAAATCTTCTACTGCGGTGGTTTTTATCCTTT
GGCGGCCGAGGTTGCATAAATAAAAGATCAATCTTTATTTAAAATTCGAG
TTAAATTCATACTATCATTCTTTGCTTTTCAAGCTGACTAACATTAACGT
CATTAACTCTAACCTAACAAAACGAACAGAACAGAAGCCGAGGAATTATT
ATAGAGACTGGAAAAACGACTGACTTGCCCGCAGAAAATCTGATACCTTT
GTTCTTTGCGGGCAAAGCTTGTACATCGATTTTTTTTTAAACAATGGAGC
AATATTTCGCTCTTCCCCTCGATGTTTATCCAGAGTTTCTATAATGGTTC
CATGCAACTAACAAACTAACTTAACCACAACAGGCCATTTCACAGTCGCA
AATCGTAATGGGTAATCAAGTCCACTGCGCGCTAATGACAACTTTCTATT
GGTCCAAAATTTTGAAAATTTTTGAAGATTTTTGCGTCTAGCCAACAGAA
AGCCGTTATGGAGGCGCAATCAGTCCTGATTACCCATGATCCATTTTGAA
TGTGAAATTGCCTATACTAACATTAACCATTACTTAATTTTTAACCAGAA
TTTCTAAAAGTATTTTTTATACTGCATTTCACCTCCAAATACCTAGCTTT
CAAAGAACTGTGGCGGACTGACTTGGTTTTAGAAACATAATTTCGCCGTT
TATCTATTAATTCCCTTAATTTTTTAACCACCCCTCAGGCAAATTAAGGC
CTGTCCAGATTTTTCAAACTTAGCCTAATTTTTTATCACCGTTTCCACTT
GTCATAGCATATCACTTCATACATCGAAAGAAGCGTATTTGAGTGTAGAT
CACTGGAATTGCTGTGCCATAATTAATTTTTTCACCCAAAAAAAGATATT
AGGCAAAAACCAAAAAATGCTGACGTCAGCCAAACTTGTTTTTTGAATAA
CTTCAGTTTGGCTTATGGTAAAAACATGAAATTTGGACCAAAGTTGCACA
CCATTAAAAGGATCATTTAAAAAAAATTTATTTGGAATTTTGCAGGCGTC
AGCACTTTATTGCAAAATTTTGTATTTTGCTGATTTCTGCTGACGTCAGC
AAAATTTGCAAAAAAATTTAGGCAAAAATGTTACTATTATTGATATGCAA
CTTTTGTCCAAAGTTCATGTTTACACCATAAGCCAAACTGGAGTTATTCA
AAAAACAAGTTTTGCTGACGTCAGCATTTTTTGGTTTTTGTCTAATATCT
TTTTTTGGGTGAAAACACTAATTATGGCACAGCTATTCCAGTGATCTACA
CTCCAATAGGCTTCTTTCGATGTATGAAGTGATATGCTATGACAAGTGGA
AACGGTGATTAAAAATTATGGTAAATTTGGACGTGCCTTAATTTGCCTGA
GCCAAAGTTGTCGCATTGCTTTACACCGTAACCTGACTGTTTTTTAAGAC
TTATCTCAATGTAATACTTTTAAAAAGTTAGATTTCTTAAAAATGTTTTA
TATATTATATTATATATTATATTTGCCGCAGGCATCGAACCCCCTCATTA
GAGCAATCAGGGTTTAGAATTCCATCCCTGGCATAGAATCCTATAGAGTC
TTTTTTAGCTTGAACCTCTATAAATCGAAAGTCTCCTTAATTCGAGTAAG
TGTAATTGTTCCTTCAGTTGACAATGCCTTACTTTCATATCTCGAAATTT
CAATAAATGGAACAAATTGTTCCTCGTGAGTGTTCGAGTCTATGGGGCAC
TTCACTGTATATTCAAAATAATCTTTGTTTTTTACAGAAGACAAAGCACA
CAATTTGCAAATGAATTCCATTTACGAATATGACCAAAAAGCAGCACCAA
TTAAATCACCAAAGAAACCAAAAAATAACCCAATGTATGACATTGAACCT
CCAACACATCATAGTTTCTCTAATGGAGGAGTCACTATCGAACGTGAGGA
CCCTGCATCTGGCTCTCCAACTAACGACGACGTCGTCGATACCAACAGCC
ATACCCAGACACATACACCAAGCAAAGCTTCAAGTGTGCGTGTANACGAC
GTCGTCGACGCCAACAGCCATACCCAGACACATACACCAAGCAAAGCTTC
AAGTGTGCGTGTAGCAGACGCGCAACTCAAATTTTACGATCCAAATGAAT
TCGGAATGACCGAAAACTCTGATGAAAATGAGAATACTGATAGACTCTCC
CCTCCGGTATCCCCGGCCCCTCGACCAGGGGATAATTATTCGTACGATAA
TACGGGAGAGACAACCGGCCGAGCACCCGAATTAGTATAATATACCTGGC
AGACAAAAATCTTTATTATGATGTTTTAGAGTGTTTATCGCGTTGCATCA
ATTTTACAATGTATTTTTTAAGCCAGCAGGCCAGCACTCTCCAAAATAAT
TAATCATTTATCGTGATATGGAGAAGATGTGAACAATGGAATGAAAAGAT
TACACCTTGAGTTTTCAAAATTTACATTAAATAATTTTTGCTGGAGTCCT
TTGTTAGAGCTAAAAAACTTCTAAATTGTCACTCATCAGGTGACTTAAAA
CCTTCCGTGGATTATCCAAATTACAAGAAAAATATATGCACTCAAATTAT
CATGGGTTTTATAAAAAGAAAAGCATTCGAAAGTTCACCGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033390XLOC_033390Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052855-exon-scaffold_220-1575043694:410741..410790TCONS_00052855-exon-scaffold_220-1575043694:410741..410790Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:410371..410425TCONS_00052855-exon-scaffold_220-1575043694:410371..410425Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:409354..409550TCONS_00052855-exon-scaffold_220-1575043694:409354..409550Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:408566..408752TCONS_00052855-exon-scaffold_220-1575043694:408566..408752Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:407165..407464TCONS_00052855-exon-scaffold_220-1575043694:407165..407464Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:404201..404557TCONS_00052855-exon-scaffold_220-1575043694:404201..404557Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:403660..403773TCONS_00052855-exon-scaffold_220-1575043694:403660..403773Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1575043694:400348..401203TCONS_00052855-exon-scaffold_220-1575043694:400348..401203Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:410741..410790TCONS_00052855-exon-scaffold_220-1510915933:410741..410790Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:410371..410425TCONS_00052855-exon-scaffold_220-1510915933:410371..410425Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:409354..409550TCONS_00052855-exon-scaffold_220-1510915933:409354..409550Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:408566..408752TCONS_00052855-exon-scaffold_220-1510915933:408566..408752Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:407165..407464TCONS_00052855-exon-scaffold_220-1510915933:407165..407464Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:404201..404557TCONS_00052855-exon-scaffold_220-1510915933:404201..404557Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:403660..403773TCONS_00052855-exon-scaffold_220-1510915933:403660..403773Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1510915933:400348..401203TCONS_00052855-exon-scaffold_220-1510915933:400348..401203Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:410741..410790TCONS_00052855-exon-scaffold_220-1491911889:410741..410790Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:410371..410425TCONS_00052855-exon-scaffold_220-1491911889:410371..410425Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:409354..409550TCONS_00052855-exon-scaffold_220-1491911889:409354..409550Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:408566..408752TCONS_00052855-exon-scaffold_220-1491911889:408566..408752Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:407165..407464TCONS_00052855-exon-scaffold_220-1491911889:407165..407464Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:404201..404557TCONS_00052855-exon-scaffold_220-1491911889:404201..404557Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:403660..403773TCONS_00052855-exon-scaffold_220-1491911889:403660..403773Clytia hemisphaericaexon
TCONS_00052855-exon-scaffold_220-1491911889:400348..401203TCONS_00052855-exon-scaffold_220-1491911889:400348..401203Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_220supercontigscaffold_220:400348..410790 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.110927	1.42604	1.62196	1.1485	0.0788062	0	6.82945e-06	0	0.61468	0.549319	2.20519	0.80913	6.82657	9.84404	0	0	3.98461	4.55972	12.8852	8.47383	17.4003	9.04513	7.73686	8.19438	5.61854	6.52398	18.1152	15.8126	2.05375	0.668708
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052855 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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