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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052802 ID=TCONS_00052802|Name=TCONS_00052802|organism=Clytia hemisphaerica|type=transcript|length=705bp
tgatcagcaaaatttcaaaaaaatatatcaataaCGGAGTAGATAACGCA
AACAATTAACGCAATTTTCCCATACTTATTTCAAATAAATAAGGCGTAAg
agtcaaaataaaattaatgtATATGCTACTCGgctaaaaatatcaacaaa
atttcCCTCTAAAATACGTTTATTTACAAGTAAAAACACCTACATCAGTT
AAGACACCATGCTGCAGATTTAtagaagaaaatttcaaaaccgttttttt
ggtaTTACATGTTGTTCCAATCTCCGAAATAAGGTTGTTCACTTTTGACA
AAGGAACCAGCATTCTGATGCGTTGGCGGTGTTTGGTAGAATTCTTTTTT
CACATCCATCATGCTTGTGGTGGCGGAGGGCGTTTCTTGTTTTACGCCCT
CTTTCTTTAAGTGAGTTTTCTCGTGTCGTTTGAGATTCGACGAAGTACCA
AAAGACCGTCCACAAATATTGCATTTATGATTGTTAGCGTGTAGACCGTT
GTGTGTTTTCCAGTAATTTTTATTAGGTAGTTCTTTATCGCATATACGAC
AATGAAAACGAACAATGACGTAAGGGTTGTCCCAATTTTCAAAAGGGTTG
TTACTGTTGTTAGTAGTAGATGAAAGGGTGCTCGGTGTTGAAAGTTTTCG
CTTTCTTTCCTAATAAGGAAGAGGAAGACAATTTAGGGGTGACCGAAAAC
TGGAA Run BLAST on NCBI transcript from alignment at scaffold_220:142836..143603+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052802 ID=TCONS_00052802|Name=TCONS_00052802|organism=Clytia hemisphaerica|type=transcript|length=768bp|location=Sequence derived from alignment at scaffold_220:142836..143603+ (Clytia hemisphaerica)
tgatcagcaaaatttcaaaaaaatatatcaataaCGGAGTAGATAACGCA
AACAATTAACGCAATTTTCCCATACTTATTTCAAATAAATAAGGCGTAAg
agtcaaaataaaattaatgtATATGCTACTCGgctaaaaatatcaacaaa
atttcCCTCTAAAATACGTTTATTTACAAGTAAAAACACCTACATCAGTT
AAGACACCATGCTGCAGATTTAtagaagaaaatttcaaaaccgttttttt
ggtaTTACATGTTGTTCCAATCTCCGAAATAAGGTTGTTCACTTTTGACA
AAGGAACCAGCATTCTGATGCGTTGGCGGTGTTTGGTAGAATTCTTTTTT
CACATCCATCATGCTTGTGGTGGCGGAGGGCGTTTCTTGTTTTACGCCCT
CTTTCTTTAAGTGAGTTTTCTCGTGTCGTTTGAGATTCGACGAAGTACCA
AAAGACCGTCCACAAATATTGCATTTATGATTGTTAGCGTGTAGACCGTT
GTGTGTTTTCCAGTAATTTTTATTAGGTANGTTGCATTTATGATTGTTAG
CATGAAGACCGTTGTGTGTTTTCCAGTAATTTTTATTAGGTAGTTCTTTA
TCGCATATACGACAATGAAAACGAACAATGACGTAAGGGTTGTCCCAATT
TTCAAAAGGGTTGTTACTGTTGTTAGTAGTAGATGAAAGGGTGCTCGGTG
TTGAAAGTTTTCGCTTTCTTTCCTAATAAGGAAGAGGAAGACAATTTAGG
GGTGACCGAAAACTGGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052802-exon-scaffold_220-1491911889:142836..143361 | TCONS_00052802-exon-scaffold_220-1491911889:142836..143361 | Clytia hemisphaerica | exon |
| TCONS_00052802-exon-scaffold_220-1510915933:142836..143361 | TCONS_00052802-exon-scaffold_220-1510915933:142836..143361 | Clytia hemisphaerica | exon |
| TCONS_00052802-exon-scaffold_220-1575043694:142836..143361 | TCONS_00052802-exon-scaffold_220-1575043694:142836..143361 | Clytia hemisphaerica | exon |
| TCONS_00052802-exon-scaffold_220-1491911889:143425..143603 | TCONS_00052802-exon-scaffold_220-1491911889:143425..143603 | Clytia hemisphaerica | exon |
| TCONS_00052802-exon-scaffold_220-1510915933:143425..143603 | TCONS_00052802-exon-scaffold_220-1510915933:143425..143603 | Clytia hemisphaerica | exon |
| TCONS_00052802-exon-scaffold_220-1575043694:143425..143603 | TCONS_00052802-exon-scaffold_220-1575043694:143425..143603 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_220 | supercontig | scaffold_220:142836..143603 + |
Blast
The following BLAST results are available for this feature:
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