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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052787 ID=TCONS_00052787|Name=TCONS_00052787|organism=Clytia hemisphaerica|type=transcript|length=1096bp
CTGCCTGATTGATTGTTTTTATATCGATGAATGAGAGAgtatataaaata
caaaaattaaatacacATTCTTACCCGTAAGGGCCGCTAAGCTCGCCTGC
TGAGAGGTTGCGGCACATTAAAGGCTGAGCTCTTTTTGAATCTTAGCGTG
GGCGCCTGCAAATCCGCCATCGCCGgaatatcgaaaaaaaaatcagaaat
taaagaaaatggTCTGTATGACTTGGTATCCAGGCAAGGCTTTCTTACTT
ACGAAgaaacacccctgtttcacggATCcgttgggaccccagccccacgg
aaaatttgtcaaaaatttcagtgggaaaataccctggaatttcagcccca
ctgggaaatttacCTTGACTTCATAtctatttgaaattcaatgtactcca
aaaccatccccactggaatttttgactTTAGATCAATAGAATTTCCttcc
ccattggaatttcaatatGGATTTTTATTCCTGCttaggaaaaagttcca
ccggggccgtgagacaggggtgtgaacAAAAAGACAACGACGACTGAAAA
CATGGGTATATGGTTTAAGCTGCAAGTGGTGATCGATGTTTTATTAAGGA
CAAATTAtaaaaggcttcgatggccaaaatgttgagaacaaatcaagaac
attttaagggattttaagaaatatgagaacatgttgagaacacTTTCTGC
CTCAGAACTCAAAAAAATCCGATTAttatggatgttcttataaataatct
TTGTAAGGTATTCAGTCAAATTagacaaaaacctaaaaaatgtgTTGTTT
TTGGACCCCTAACGGTGACGGTAGATTTAAGTCCTCTTCACTCAAGTATA
GATCCACATTCTCGTATATTATTCTTTCAACACACACTCTTTTGCTCGAT
TTTTCTTCGCTATATCTAAGTTGGTAGTTTaattatcttgaaaatatgtt
ttataGACGTTTTAGCAACATTCAAATGTAATACAATCTATTTTTGGCAC
TTAGAGCctcaacttttctttttataaggatATATTGTTGGAtttctttt
tgacattttatctAGTTTTCAAAAACTCCATTCCTTTATTAACTTG Run BLAST on NCBI transcript from alignment at scaffold_22:136929..138024 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052787 ID=TCONS_00052787|Name=TCONS_00052787|organism=Clytia hemisphaerica|type=transcript|length=1096bp|location=Sequence derived from alignment at scaffold_22:136929..138024 (Clytia hemisphaerica)
CAAGTTAATAAAGGAATGGAGTTTTTGAAAACTagataaaatgtcaaaaa
gaaaTCCAACAATATatccttataaaaagaaaagttgagGCTCTAAGTGC
CAAAAATAGATTGTATTACATTTGAATGTTGCTAAAACGTCtataaaaca
tattttcaagataattAAACTACCAACTTAGATATAGCGAAGAAAAATCG
AGCAAAAGAGTGTGTGTTGAAAGAATAATATACGAGAATGTGGATCTATA
CTTGAGTGAAGAGGACTTAAATCTACCGTCACCGTTAGGGGTCCAAAAAC
AAcacattttttaggtttttgtctAATTTGACTGAATACCTTACAAagat
tatttataagaacatccataaTAATCGGATTTTTTTGAGTTCTGAGGCAG
AAAgtgttctcaacatgttctcatatttcttaaaatcccttaaaatgttc
ttgatttgttctcaacattttggccatcgaagccttttaTAATTTGTCCT
TAATAAAACATCGATCACCACTTGCAGCTTAAACCATATACCCATGTTTT
CAGTCGTCGTTGTCTTTTTgttcacacccctgtctcacggccccggtgga
actttttcctaaGCAGGAATAAAAATCCatattgaaattccaatggggaa
GGAAATTCTATTGATCTAAagtcaaaaattccagtggggatggttttgga
gtacattgaatttcaaatagaTATGAAGTCAAGgtaaatttcccagtggg
gctgaaattccagggtattttcccactgaaatttttgacaaattttccgt
ggggctggggtcccaacgGATccgtgaaacaggggtgtttcTTCGTAAGT
AAGAAAGCCTTGCCTGGATACCAAGTCATACAGAccattttctttaattt
ctgatttttttttcgatattcCGGCGATGGCGGATTTGCAGGCGCCCACG
CTAAGATTCAAAAAGAGCTCAGCCTTTAATGTGCCGCAACCTCTCAGCAG
GCGAGCTTAGCGGCCCTTACGGGTAAGAATgtgtatttaatttttgtatt
ttatatacTCTCTCATTCATCGATATAAAAACAATCAATCAGGCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052787-exon-scaffold_22-1491911889:136929..138024 | TCONS_00052787-exon-scaffold_22-1491911889:136929..138024 | Clytia hemisphaerica | exon |
| TCONS_00052787-exon-scaffold_22-1510915933:136929..138024 | TCONS_00052787-exon-scaffold_22-1510915933:136929..138024 | Clytia hemisphaerica | exon |
| TCONS_00052787-exon-scaffold_22-1575043694:136929..138024 | TCONS_00052787-exon-scaffold_22-1575043694:136929..138024 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_22 | supercontig | scaffold_22:136929..138024 . |
Blast
The following BLAST results are available for this feature:
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