TCONS_00052732 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052732
Unique NameTCONS_00052732
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1769

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052732 ID=TCONS_00052732|Name=TCONS_00052732|organism=Clytia hemisphaerica|type=transcript|length=1769bp
ttcccagttgGGCTGTGAGAAGGTGGTGTAATATATGTATTTATTACAGG
CTTTGggataaaaatatatttgagcACCTCTGAATGTCCGCTTCTCAGGA
TAAAACGAGCATCGATAGATCATAACACGCGGAATGCCATACAATACCTT
TTAAAAAGGCAAAGGTCATGACAACTGCAACGCCTTAGCAAAACCTTCCC
TTCAGCCACAATCTCTGACCTCAAAGGGTTTTCGAGTACTGGCTTGACGT
TACATTTATATTGTCTAGTTTGTGtaataatttgttgtttttatttatct
GTTATCTCCGGAATACTGCTAAATGCTACATAAACAAAATATTTGTATat
cgttaaaaaaaaatttttttatgtttcttcTGTGTTTGATTGCTCAAGAC
TGTTAGTTTTAGTggtttgaaataattttgatggcCTGTAGAAATTAAGC
AATTTTATGGACGGTTTGTGATTTCAAATCTAAGTTGGAAAAAGAAGTGA
TACAATTATGATGTATTGTATTTTAGTTGGCGCTAGTTTGCTGCTTTTAA
ATCATTTGGTTTTAGTAAAAAGTGGTGTTTTAGATTGCGGAGGCGTTTAC
ACTTCCCGATTCGGCGATATCCAATCTCCATCGTTCCCGAATGCAATATC
AAATAACCTGCACTGTACATGGATCATCAACGGAACGCGACGCGGagatt
tggtatcattggaattTGATGCTTTTAGTATAAATGATACGGAGAGTACA
GATTGTAGCAAAACATATATCGAAATCAGTAACTATGGCAGCCGTGGTGT
TCGTTTTTGTGATGATAAACTACCCCCTGGTGTATTAGATTCTGAATCCA
ATATTGTGGTGATTACATTGGTGACTTCAGCTAAGGATCATACATATTCA
AAAGGGTTTATATTGAAATATGTGATATCTCAGAAGATTGTCACAACAAC
TATGACGGTACCAAAAACAATACCTACCATACCAACGTGTGGAGGGGAAG
TCACTGCTCCGTTTGGTCATTTGAATTCACCATTTTTCCCTGAAGCACAA
ACCAATCTTAACTGTATCTGGAATATCAATGCTAAAAACGAAAACGActa
tatcgaacttgctttcaacACTATTGATATCAATGATGATTCAAAAGATT
GTCAAAACAATTACATTACTTTTGGTGATATGATACATGAAAACACGTTA
CCAAGATACTGTAATCGAAACAAACCGACTTTGAATTTTATCTCGAAAAC
ACCAAGTGTGTTTATCAAGCTGGTAACAGATAATGGGACGAATGCATCAC
CAGGGTTTGACGCTGTATATAAAATGTACAATGGAAATGGGAGTATCATA
TCGACTACGCCTCTTTCTTCCACACCACAAAGTGGAGAATCGACAGGAGC
AGGTGGCTCCAAGAACACTGGTGAAAAAGTTGCAGTGGGAATAATTATTG
GATTGCTTGCTCTTATACTAATTGTGGATTTGTATAATTGTCGACGACAG
AAAGGAATGATTTATTATGCTTGTACTAAACAAGATAAGTACAAACAAAA
GAGACTTTACAATGAACTATAGCGACGGACAAGAAATTTTATAATTCCGA
GTAAGCATTCTACTTTGCTATCATATAGAAACCTTCTCAGAGTAATAACA
GCCAACCTTTGTCATCCGCGAAagtaagtcccaatggaaatttatgaaat
taagtccccgcgtaATCTTAGAATTTCGCTGATGAACCCAactgcgaaaa
tttatcccatttattaagt
Run BLAST on NCBI

protein sequence of TCONS_00052732-protein

>TCONS_00052732-protein ID=TCONS_00052732-protein|Name=TCONS_00052732-protein|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MMYCILVGASLLLLNHLVLVKSGVLDCGGVYTSRFGDIQSPSFPNAISNN
LHCTWIINGTRRGDLVSLEFDAFSINDTESTDCSKTYIEISNYGSRGVRF
CDDKLPPGVLDSESNIVVITLVTSAKDHTYSKGFILKYVISQKIVTTTMT
VPKTIPTIPTCGGEVTAPFGHLNSPFFPEAQTNLNCIWNINAKNENDYIE
LAFNTIDINDDSKDCQNNYITFGDMIHENTLPRYCNRNKPTLNFISKTPS
VFIKLVTDNGTNASPGFDAVYKMYNGNGSIISTTPLSSTPQSGESTGAGG
SKNTGEKVAVGIIIGLLALILIVDLYNCRRQKGMIYYACTKQDKYKQKRL
YNEL
Run BLAST on NCBI

transcript from alignment at scaffold_219:85479..88953-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052732 ID=TCONS_00052732|Name=TCONS_00052732|organism=Clytia hemisphaerica|type=transcript|length=3475bp|location=Sequence derived from alignment at scaffold_219:85479..88953- (Clytia hemisphaerica)
TTCCCAGTTGGGCTGTGAGAAGGTGGTGTAATATATGTATTTATTACAGG CTTTGGGATAAAAATATATTTGAGCACCTCTGAATGTCCGCTTCTCAGGA TAAAACGAGCATCGATAGATCATAACACGCGGAATGCCATACAATACCTT TTAAAAAGGCAAAGGTCATGACAACTGCAACGCCTTAGCAAAACCTTCCC TTCAGCCACAATCTCTGACCTCAAAGGGTTTTCGAGTACTGGCTTGACGT TACATTTATATTGTCTAGTTTGTGTAATAATTTGTTGTTTTTATTTATCT GTTATCTCCGGAATACTGCTAAATGCTACATAAACAAAATATTTGTATAT CGTTAAAAAAAAATTTTTTTATGTTTCTTCTGTGTTTGATTGCTCAAGAC TGTTAGTTTTAGTGGTTTGAAATAATTTTGATGGCCTGTAGAAATTAAGC AATTTTATGGACGGTTTGTGATTTCAAATCTAAGTTGGAAAAAGAAGTGA TACAATTATGATGTATTGTATTTTAGTTGGCGCTAGTTTGCTGCTTTTAA ATCATTTGGTTTTAGTAAAAAGTGGTAAGCTATCAAATACCAAATTTCCC TTTGAACCAAGTGATATGGTTGGTTTCACGAGGGATATAGTACGACAGGG GTGTTACATGATCAGTTTAAATAGATATATTTGTCGGGATATCTATGACT GACACAAGATAACCGAGACCCAAAGATATCTCCACCAAGTATAGGGTTCT CTGCTCATCAAAAGTTTCTTATAGAGCAGTAGAATGTTTTAATATTATTA TCACAACAAATATCTCTAATTAGACTGATTATGTAACACCCCTGTTGTAA CAAATCCCTCCTTGGACCAATCAGCTCAAAGATTTCTCATATCTTCTCTA AAAAGTGCTTATGAAGAAGCAGTGAGAGGACGGTATCAATGTAATTGACT CAAAAAAATCCTCAAATTAAGTTTTCCAATAAGGTATTTAAGGACTTTAG GTGGAAAGTAAACGAAGGTCGAAAGGCAAATGCAGGGTATTTTACATTCT CAGCAATCCAATGAGACAAAAGTTCTGTAATGATTTAATCGGTTGTTTTA ACAGGTGTTTTAGATTGCGGAGGCGTTTACACTTCCCGATTCGGCGATAT CCAATCTCCATCGTTCCCGAATGCAATATCAAATAACCTGCACTGTACAT GGATCATCAACGGAACGCGACGCGGAGATTTGGTATCATTGGAATTTGAT GCTTTTAGTATAAATGATACGGAGAGTACAGATTGTAGCAAAACATATAT CGAAATCAGTAACTATGGCAGCCGTGGTGTTCGTTTTTGTGATGATAAAC TACCCCCTGGTGTATTAGATTCTGAATCCAATATTGTGGTGATTACATTG GTGACTTCAGCTAAGGATCATACATATTCAAAAGGGTTTATATTGAAATA TGTGATATCTCAGAAGATTGTCACAACAACTATGACGGTACCAAAAACAA TACCTACCATACCAAGTAAGAAATTTATCAATCTCGTACCCAGAGTCACT TGCAGTACTTTTTGTATTTTATCCTTTTGTGAGGGCCATTGATTTGAAAG CCCCAAAGGGACCAGAGATGAATATTTAACCCTATTCAAATCTGGCGATA CCTTCTAGCGTTTGTGTAAGACCACGTGGGTCACGCGTTTTTGGAAGAGA AATAAGTGGGCTCATTTCCCATCTGGGAGTTTTGGTGCTCTGAAGTCAAT GGTGAGGGCTATTATCAGAATCATAAAAAGCAAAATATGGGTTTGAGTTT GTAAATTCATTATATATCTGTTAGCGGTACTATGAAAATCTATCTTATAG TCCTCAAAATCGCCCTAAACTCGTACGTAGAGCCCCTTACGTTACACCAC CTTTTGATTTACAATGCTAGCCCTTTTCATGGAGAAAAACGTGACAGTAT TTCGTTGTCAAACATGCCAAGTAGTGACAAAATAAGAATTTCAGCATTCG CTGTTGGTGTTGTTGGCGTTGACGGTGACAAAAATTTATCGGTATTTCAG TGTATGCAACCCCTGTATGCCCCCATCTACTATTAGTGATATGCACCACT GCAATGTCTTCTGACATTACATCACAGACTCACTAGACTAAAATCAGTTA ATACGTCACTTTCAACCAATCAGCTGTTGGGTCCTAACGCTGTAAGTTTA TGAAATATTGACAAATATCTTTTTGACAAAAACGAAAAATGCTAAAAAAA CATCACTTTATCATAGCGTGTGGAGGGGAAGTCACTGCTCCGTTTGGTCA TTTGAATTCACCATTTTTCCCTGAAGCACAAACCAATCTTAACTGTATCT GGAATATCAATGCTAAAAACGAAAACGACTATATCGAACTTGCTTTCAAC ACTATTGATATCAATGATGATTCAAAAGATTGTCAAAACAATTACATTAC TTTTGGTGATATGATACATGAAAACACGTTACCAAGATACTGTAATCGAA ACAAACCGACTTTGAATTTTATCTCGAAAACACCAAGTGTGTTTATCAAG CTGGTAACAGATAATGGGACGAATGCATCACCAGGGTTTGACGCTGTATA TAAAATGTACAATGGAAATGGGAGTATCATATCGACTACGCCTCTTTCTT GTAAGTTCATTCTCATAGCTCCGCTTCGTGAAATTAATGATGTTCGAGCT AGTGTAGAAATCAATGAAAAATGACGAGACAAGATTGGCAAACTTTACCA CAAAAAAGGCTCCATATTAACTTAGAGAGTTTGGTTATACAGGTGAAAAG AGAATTTTGTTATCCTAAAATAAGCACTGCAGTATTCTTTGAGGTTCATG TGCAGAGCTATTTAAAGATAACCGGTTATTCGGTAGCACCGTTTTAAATT ATTAGTCTAGATCTAGACTAGCCCAAAATCGACTTTCTCGCCGGAACTTT AAATCTTGAAAAAAGAATTCTCAATATATTTCAATCATGATTGTTGATAG AGAGGGATCAACAAAAACAAAGATCAAAGATCGATTGAACCGTTCTAAAC GTTTCTACTACTCTTTCTTTTTCAGCCACACCACAAAGTGGAGAATCGAC AGGAGCAGGTGGCTCCAAGAACACTGGTGAAAAAGTTGCAGTGGGAATAA TTATTGGATTGCTTGCTCTTATACTAATTGTGGATTTGTATAATTGTCGA CGACAGAAAGGAATGATTTATTATGCTTGTACTAAACAAGATAAGTACAA ACAAAAGAGACTTTACAATGAACTATAGCGACGGACAAGAAATTTTATAA TTCCGAGTAAGCATTCTACTTTGCTATCATATAGAAACCTTCTCAGAGTA ATAACAGCCAACCTTTGTCATCCGCGAAAGTAAGTCCCAATGGAAATTTA TGAAATTAAGTCCCCGCGTAATCTTAGAATTTCGCTGATGAACCCAACTG CGAAAATTTATCCCATTTATTAAGT

Coding sequence (CDS) from alignment at scaffold_219:85479..88953-

>TCONS_00052732 ID=TCONS_00052732|Name=TCONS_00052732|organism=Clytia hemisphaerica|type=CDS|length=4260bp|location=Sequence derived from alignment at scaffold_219:85479..88953- (Clytia hemisphaerica)
CCACACCACAAAGTGGAGAATCGACAGGAGCAGGTGGCTCCAAGAACACT
GGTGAAAAAGTTGCAGTGGGAATAATTATTGGATTGCTTGCTCTTATACT
AATTGTGGATTTGTATAATTGTCGACGACAGAAAGGAATGATTTATTATG
CTTGTACTAAACAAGATAAGTACAAACAAAAGAGACTTTACAATGAACTA
TAGCGTGTGGAGGGGAAGTCACTGCTCCGTTTGGTCATTTGAATTCACCA
TTTTTCCCTGAAGCACAAACCAATCTTAACTGTATCTGGAATATCAATGC
TAAAAACGAAAACGACTATATCGAACTTGCTTTCAACACTATTGATATCA
ATGATGATTCAAAAGATTGTCAAAACAATTACATTACTTTTGGTGATATG
ATACATGAAAACACGTTACCAAGATACTGTAATCGAAACAAACCGACTTT
GAATTTTATCTCGAAAACACCAAGTGTGTTTATCAAGCTGGTAACAGATA
ATGGGACGAATGCATCACCAGGGTTTGACGCTGTATATAAAATGTACAAT
GGAAATGGGAGTATCATATCGACTACGCCTCTTTCTTGTGTTTTAGATTG
CGGAGGCGTTTACACTTCCCGATTCGGCGATATCCAATCTCCATCGTTCC
CGAATGCAATATCAAATAACCTGCACTGTACATGGATCATCAACGGAACG
CGACGCGGAGATTTGGTATCATTGGAATTTGATGCTTTTAGTATAAATGA
TACGGAGAGTACAGATTGTAGCAAAACATATATCGAAATCAGTAACTATG
GCAGCCGTGGTGTTCGTTTTTGTGATGATAAACTACCCCCTGGTGTATTA
GATTCTGAATCCAATATTGTGGTGATTACATTGGTGACTTCAGCTAAGGA
TCATACATATTCAAAAGGGTTTATATTGAAATATGTGATATCTCAGAAGA
TTGTCACAACAACTATGACGGTACCAAAAACAATACCTACCATACCAAAT
GATGTATTGTATTTTAGTTGGCGCTAGTTTGCTGCTTTTAAATCATTTGG
TTTTAGTAAAAAGTGCCACACCACAAAGTGGAGAATCGACAGGAGCAGGT
GGCTCCAAGAACACTGGTGAAAAAGTTGCAGTGGGAATAATTATTGGATT
GCTTGCTCTTATACTAATTGTGGATTTGTATAATTGTCGACGACAGAAAG
GAATGATTTATTATGCTTGTACTAAACAAGATAAGTACAAACAAAAGAGA
CTTTACAATGAACTATAGCGTGTGGAGGGGAAGTCACTGCTCCGTTTGGT
CATTTGAATTCACCATTTTTCCCTGAAGCACAAACCAATCTTAACTGTAT
CTGGAATATCAATGCTAAAAACGAAAACGACTATATCGAACTTGCTTTCA
ACACTATTGATATCAATGATGATTCAAAAGATTGTCAAAACAATTACATT
ACTTTTGGTGATATGATACATGAAAACACGTTACCAAGATACTGTAATCG
AAACAAACCGACTTTGAATTTTATCTCGAAAACACCAAGTGTGTTTATCA
AGCTGGTAACAGATAATGGGACGAATGCATCACCAGGGTTTGACGCTGTA
TATAAAATGTACAATGGAAATGGGAGTATCATATCGACTACGCCTCTTTC
TTGTGTTTTAGATTGCGGAGGCGTTTACACTTCCCGATTCGGCGATATCC
AATCTCCATCGTTCCCGAATGCAATATCAAATAACCTGCACTGTACATGG
ATCATCAACGGAACGCGACGCGGAGATTTGGTATCATTGGAATTTGATGC
TTTTAGTATAAATGATACGGAGAGTACAGATTGTAGCAAAACATATATCG
AAATCAGTAACTATGGCAGCCGTGGTGTTCGTTTTTGTGATGATAAACTA
CCCCCTGGTGTATTAGATTCTGAATCCAATATTGTGGTGATTACATTGGT
GACTTCAGCTAAGGATCATACATATTCAAAAGGGTTTATATTGAAATATG
TGATATCTCAGAAGATTGTCACAACAACTATGACGGTACCAAAAACAATA
CCTACCATACCAAATGATGTATTGTATTTTAGTTGGCGCTAGTTTGCTGC
TTTTAAATCATTTGGTTTTAGTAAAAAGTGCCACACCACAAAGTGGAGAA
TCGACAGGAGCAGGTGGCTCCAAGAACACTGGTGAAAAAGTTGCAGTGGG
AATAATTATTGGATTGCTTGCTCTTATACTAATTGTGGATTTGTATAATT
GTCGACGACAGAAAGGAATGATTTATTATGCTTGTACTAAACAAGATAAG
TACAAACAAAAGAGACTTTACAATGAACTATAGCGTGTGGAGGGGAAGTC
ACTGCTCCGTTTGGTCATTTGAATTCACCATTTTTCCCTGAAGCACAAAC
CAATCTTAACTGTATCTGGAATATCAATGCTAAAAACGAAAACGACTATA
TCGAACTTGCTTTCAACACTATTGATATCAATGATGATTCAAAAGATTGT
CAAAACAATTACATTACTTTTGGTGATATGATACATGAAAACACGTTACC
AAGATACTGTAATCGAAACAAACCGACTTTGAATTTTATCTCGAAAACAC
CAAGTGTGTTTATCAAGCTGGTAACAGATAATGGGACGAATGCATCACCA
GGGTTTGACGCTGTATATAAAATGTACAATGGAAATGGGAGTATCATATC
GACTACGCCTCTTTCTTGTGTTTTAGATTGCGGAGGCGTTTACACTTCCC
GATTCGGCGATATCCAATCTCCATCGTTCCCGAATGCAATATCAAATAAC
CTGCACTGTACATGGATCATCAACGGAACGCGACGCGGAGATTTGGTATC
ATTGGAATTTGATGCTTTTAGTATAAATGATACGGAGAGTACAGATTGTA
GCAAAACATATATCGAAATCAGTAACTATGGCAGCCGTGGTGTTCGTTTT
TGTGATGATAAACTACCCCCTGGTGTATTAGATTCTGAATCCAATATTGT
GGTGATTACATTGGTGACTTCAGCTAAGGATCATACATATTCAAAAGGGT
TTATATTGAAATATGTGATATCTCAGAAGATTGTCACAACAACTATGACG
GTACCAAAAACAATACCTACCATACCAAATGATGTATTGTATTTTAGTTG
GCGCTAGTTTGCTGCTTTTAAATCATTTGGTTTTAGTAAAAAGTGCCACA
CCACAAAGTGGAGAATCGACAGGAGCAGGTGGCTCCAAGAACACTGGTGA
AAAAGTTGCAGTGGGAATAATTATTGGATTGCTTGCTCTTATACTAATTG
TGGATTTGTATAATTGTCGACGACAGAAAGGAATGATTTATTATGCTTGT
ACTAAACAAGATAAGTACAAACAAAAGAGACTTTACAATGAACTATAGCG
TGTGGAGGGGAAGTCACTGCTCCGTTTGGTCATTTGAATTCACCATTTTT
CCCTGAAGCACAAACCAATCTTAACTGTATCTGGAATATCAATGCTAAAA
ACGAAAACGACTATATCGAACTTGCTTTCAACACTATTGATATCAATGAT
GATTCAAAAGATTGTCAAAACAATTACATTACTTTTGGTGATATGATACA
TGAAAACACGTTACCAAGATACTGTAATCGAAACAAACCGACTTTGAATT
TTATCTCGAAAACACCAAGTGTGTTTATCAAGCTGGTAACAGATAATGGG
ACGAATGCATCACCAGGGTTTGACGCTGTATATAAAATGTACAATGGAAA
TGGGAGTATCATATCGACTACGCCTCTTTCTTGTGTTTTAGATTGCGGAG
GCGTTTACACTTCCCGATTCGGCGATATCCAATCTCCATCGTTCCCGAAT
GCAATATCAAATAACCTGCACTGTACATGGATCATCAACGGAACGCGACG
CGGAGATTTGGTATCATTGGAATTTGATGCTTTTAGTATAAATGATACGG
AGAGTACAGATTGTAGCAAAACATATATCGAAATCAGTAACTATGGCAGC
CGTGGTGTTCGTTTTTGTGATGATAAACTACCCCCTGGTGTATTAGATTC
TGAATCCAATATTGTGGTGATTACATTGGTGACTTCAGCTAAGGATCATA
CATATTCAAAAGGGTTTATATTGAAATATGTGATATCTCAGAAGATTGTC
ACAACAACTATGACGGTACCAAAAACAATACCTACCATACCAAATGATGT
ATTGTATTTTAGTTGGCGCTAGTTTGCTGCTTTTAAATCATTTGGTTTTA
GTAAAAAGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033335XLOC_033335Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052732-exon-scaffold_219-1575043694:88380..88953TCONS_00052732-exon-scaffold_219-1575043694:88380..88953Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1575043694:87439..87849TCONS_00052732-exon-scaffold_219-1575043694:87439..87849Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1575043694:86304..86687TCONS_00052732-exon-scaffold_219-1575043694:86304..86687Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1575043694:85479..85878TCONS_00052732-exon-scaffold_219-1575043694:85479..85878Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1510915933:88380..88953TCONS_00052732-exon-scaffold_219-1510915933:88380..88953Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1510915933:87439..87849TCONS_00052732-exon-scaffold_219-1510915933:87439..87849Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1510915933:86304..86687TCONS_00052732-exon-scaffold_219-1510915933:86304..86687Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1510915933:85479..85878TCONS_00052732-exon-scaffold_219-1510915933:85479..85878Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1491911889:88380..88953TCONS_00052732-exon-scaffold_219-1491911889:88380..88953Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1491911889:87439..87849TCONS_00052732-exon-scaffold_219-1491911889:87439..87849Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1491911889:86304..86687TCONS_00052732-exon-scaffold_219-1491911889:86304..86687Clytia hemisphaericaexon
TCONS_00052732-exon-scaffold_219-1491911889:85479..85878TCONS_00052732-exon-scaffold_219-1491911889:85479..85878Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052732-proteinTCONS_00052732-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_219supercontigscaffold_219:85479..88953 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0454843 0.0443543 0 0 0.582712 0.484702 1.05259 1.17703 6.9375 7.73864 21.8427 14.5857 15.8965 17.5925 18.0405 31.3616 4.50712 3.90221 6.06803 7.84232 0.0879536 0.0965265 0.0521514 0.118533 0.0244172 0.392252 0.249472 0.0665608 0.050484 0.0257176
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000859CUB_dom
Blast
BLAST of TCONS_00052732 vs. Swiss-Prot (Human)
Match: BMP1 (Bone morphogenetic protein 1 OS=Homo sapiens GN=BMP1 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.721e-16
Identity = 66/245 (26.94%), Postives = 110/245 (44.90%), Query Frame = 1
Query:  586 CGGVYTSRFGDIQSPSFPNAISNNLHCTWIINGTRRGDLVSLEFDAFSINDTESTDCSKTYIEISNYGSRGV----RFCDDKLPPGVLDSESNIVVITLVTSAKDHTYSKGFILKYVISQXXXXXXXXXXXXXXXXXXCGGEVTAPFGHLNSPFFP-EAQTNLNCIWNINAKNENDYIELAFNTIDINDDSKDCQNNYITFGDMIHENT--LPRYCNRNKPTLNFISKTPSVFIKLVTDNGTNAS 1299
            CG       G+  SP +PN  S ++HC W I+ T  G+ + L F   S++   S  C   Y+E+ +   R      RFC  KLP  ++ ++S + V    +S   +   KGF   Y                      CGG+V   +GH+ SP +P + + +  CIW I   +E  ++ L F + +I +    C  +Y+   D   E++  + RYC   KP  +  S +  +++K V+D   N +
Sbjct:  322 CGETLQDSTGNFSSPEYPNGYSAHMHCVWRISVT-PGEKIILNFT--SLDLYRSRLCWYDYVEVRDGFWRKAPLRGRFCGSKLPEPIVSTDSRLWVEFRSSS---NWVGKGFFAVY-------------------EAICGGDVKKDYGHIQSPNYPDDYRPSKVCIWRIQV-SEGFHVGLTFQSFEI-ERHDSCAYDYLEVRDGHSESSTLIGRYCGYEKPD-DIKSTSSRLWLKFVSDGSINKA 538          
The following BLAST results are available for this feature:
BLAST of TCONS_00052732 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BMP13.721e-1626.94Bone morphogenetic protein 1 OS=Homo sapiens GN=BM... [more]
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