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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052711 ID=TCONS_00052711|Name=TCONS_00052711|organism=Clytia hemisphaerica|type=transcript|length=894bp
CATCATGAAGATTTAGCCATCGGTTTGCTtgtggaatttcaaaaattgag
gttaTTGATGGGAATATGAAAAAAAGGTTCCAATTTTAGCTACCTACCGA
CCAACTGACCCACTTTTCAAAGCTtctaggacacgaaccaaacaatcaac
agaatcaattgggcctggcctaaTTCAAGTGAACTTTAATCAACTCCATC
ATggaacgattaaagtttgagtaaaaaaaataatcaaaactctaagattt
tttaagaaattgtgAGTGTTTGATCAATGGGATGGAATATTTTTTGCCAT
AGCCTGAATCAGAAGGTCCTTGATGCGGTTGTTTTCCAGACACTGGCTCC
GTGCCGTGGACCATGCCCCCATGATGGATATGAATGATAGCATCACATTT
GCATCTGAAATGATTTTAGTGTGTAAGTCAGAtcaaattataataaaaaa
gctACTTTTAAAGAATTATATAACAATAAACAATCAATCACCATCAACAT
TCAAAAAACCTCTATCACATCAGCTCAGCTATCACACTAACTTGAACTTC
ATGAGCAAAACCACCTTCCCAAAACATCGAACCATCCATCAACTCGACca
ttatcaaaacaaaccatcaaaaacCGGGGGTTTAATTAAAGCCTTCATTT
GTTTCGACATCAATCTAATGAAATAAACATAACATGTTTTCCAtataaaa
caaaatattcaaatttaaaataaagaaaagtatTACACTTTGGATtaagt
tttttcaaatgattGTAATAGCTTTATGTTGTGAGAAACATAAACCCCCT
GATTTTACtcaaatcgaaatcgaaagtagtGCTAATGGTCATATCGCGAA
AAGCACCGGGATGCCGGAAATGCGGAAATTACCGCAATGCATCt Run BLAST on NCBI transcript from alignment at scaffold_218:624181..625074 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052711 ID=TCONS_00052711|Name=TCONS_00052711|organism=Clytia hemisphaerica|type=transcript|length=894bp|location=Sequence derived from alignment at scaffold_218:624181..625074 (Clytia hemisphaerica)
aGATGCATTGCGGTAATTTCCGCATTTCCGGCATCCCGGTGCTTTTCGCG
ATATGACCATTAGCactactttcgatttcgatttgaGTAAAATCAGGGGG
TTTATGTTTCTCACAACATAAAGCTATTACaatcatttgaaaaaacttaA
TCCAAAGTGTAatacttttctttattttaaatttgaatattttgttttat
aTGGAAAACATGTTATGTTTATTTCATTAGATTGATGTCGAAACAAATGA
AGGCTTTAATTAAACCCCCGgtttttgatggtttgttttgataatgGTCG
AGTTGATGGATGGTTCGATGTTTTGGGAAGGTGGTTTTGCTCATGAAGTT
CAAGTTAGTGTGATAGCTGAGCTGATGTGATAGAGGTTTTTTGAATGTTG
ATGGTGATTGATTGTTTATTGTTATATAATTCTTTAAAAGTagctttttt
attataatttgaTCTGACTTACACACTAAAATCATTTCAGATGCAAATGT
GATGCTATCATTCATATCCATCATGGGGGCATGGTCCACGGCACGGAGCC
AGTGTCTGGAAAACAACCGCATCAAGGACCTTCTGATTCAGGCTATGGCA
AAAAATATTCCATCCCATTGATCAAACACTcacaatttcttaaaaaatct
tagagttttgattattttttttactcaaactttaatcgttccATGATGGA
GTTGATTAAAGTTCACTTGAAttaggccaggcccaattgattctgttgat
tgtttggttcgtgtcctagaAGCTTTGAAAAGTGGGTCAGTTGGTCGGTA
GGTAGCTAAAATTGGAACCTTTTTTTCATATTCCCATCAAtaacctcaat
ttttgaaattccacaAGCAAACCGATGGCTAAATCTTCATGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052711-exon-scaffold_218-1491911889:624181..625074 | TCONS_00052711-exon-scaffold_218-1491911889:624181..625074 | Clytia hemisphaerica | exon |
| TCONS_00052711-exon-scaffold_218-1510915933:624181..625074 | TCONS_00052711-exon-scaffold_218-1510915933:624181..625074 | Clytia hemisphaerica | exon |
| TCONS_00052711-exon-scaffold_218-1575043694:624181..625074 | TCONS_00052711-exon-scaffold_218-1575043694:624181..625074 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_218 | supercontig | scaffold_218:624181..625074 . |
Blast
The following BLAST results are available for this feature:
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