TCONS_00052530 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052530
Unique NameTCONS_00052530
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2012

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052530 ID=TCONS_00052530|Name=TCONS_00052530|organism=Clytia hemisphaerica|type=transcript|length=2012bp
TCATAAGTCCTCCATGCCAgcaaaaaacaatgataaagatTCATGCCCAA
GAAAACGTTTTGTGAAACAAAGATGCTACTTTTCCCTTGGTTATCCTGTT
TGTATGTTCTTATCCTTACTGGCACGGCTTACGGACGGCAAAAACAAGGC
GAACTGACATTAACGGATGTTCGCCGAGACCAGAAGCTAGTCTCTAAACC
AATTGCATCCATCCCTGTTAGCAAAAGGAGTCCAGTGTCCTGTTTAACAC
ATTGTTTGGCGCGTGGTGGCAAAGCATTTAATGTTAATTTGGAAAAGGGT
ATTTGTGAGATTTTGGGAGAATCCAAAATGGACGATGATAGTTTAGACAT
GAAAGAGGAAAAAGGTTGGACATACTATGGACCAAAAAAGCGAACTCCAA
CAGAGGACTATGAAGATTGTTACAAAGTGACGTCATTGATCAATCAAAAG
GAACATTGTTGTCCCAAAGGACGGAACGGAGACAGGTGCCAGTACCAAGC
CACCTGCGCTCACAAATACTATGGTGCATGTCATGGCACAAACGATCTGG
AAATTTCAACTTCAAGGAAAAAGTTTTTAGGAAGTTTCTCATCAACTCAC
GACTGCTTTCAACAATGCAAAATCCACACCTCAAAAAGCCCTGATGGTGC
AGCATGCGAATCATTGGAGACTGTAAACGGCCACGATTGTTACGTCATTC
CAAGAGGAGCCAAATATGGAAAAGCGACTATAACACACGGAGCTTATTAC
GCGAATTGTTGGGTATTCACTAAATGTGATGCAGGGAACAAAACTTTAAG
TTGCCATTTTGTTCATCGCGAGGCAGTCACTGGTTCCGGAACGACACAAT
ACTCCCTGGGCGTTTTCAATTCAAGGGAGCTTTGCGCCCATGCATGTTAC
AAGAAGAAAAGAGATGATACTCAAAACATCAATGCTGTTACATACTATGG
TGACACAAAAGCGTGCACCTGTTACTCGGGCGTCAGTTCCATCAACGCTG
CAATACCGACAGATCCTGAGACAGTTTCGTGTATCATCAACACTGAGTCG
TCGAAAAAAGaCACAAGCATCACTGTTCTCGCGGTGGATCATTCGAGTCC
AACTGTGGGaaagtatttcaattttgatcgtCACATAATTAGCCTGGGCG
ATCACGAAGaacgaagatttctagcctacATTCCACGAACAAAAACAACC
GCGGAAGTTAAAGTCTGGGGTTATGTGAATGGAGGAAGTCGAGGAACAGC
TCACGGCAGATTTGCTTCGTCTCCAGCAAATGGACAATGGAGAGTTGGAG
ATAAAATTGTCCCTATTGATCTTTCAAGAGATTGATTTTCATCTACTGTA
ATATGTGTAAAACGAAATGTTAGATTGAACGATACGTAACGCAAGCTTTA
AAGCCAGTATATCTATTCACGAGTCTGTTTGCTTATTCTGCAAAAACATT
CCACAGCTCCATTAAAAATACAgacaattcattccaattcttaTTCCACA
CTTTGCAGTCAAAACATTGTAAAACTCTCTGGTTATTAAAATGTATACAG
TATTACTGAAGAATTGAAGTGAAGACATTACAGTGTTGAATCGGACAATT
AACTTACGTCACGCGCTATCTTTagttttgatgattggttgaataaCTGC
ACTCTCTATGCAAGCTCAGCATTTTTGATGCAGTGATTCAGACCTCGGAA
AAcataatgtcaatctggctttaaCATAAAATATATTAATTTATCCGTTA
TTATTCTAATCATAATTAGAATTTTCTCATGTATATAATTTTCTAGACAA
AACTGTTTTTTGGTCACATCTTATGATTGTACGCAAATGCACGGtacaac
tttttgattttttttcatatttatgaAGCACTACCACTGCAACGTGCACT
CTTCTGCACATTTGTTATAAATACTGATCgtaatgaaatattttgcaatt
cACCGAGTCTCTTTCGCTGAAACTTAAAAATTATTACAGAAGACATAAAT
ACACAATTCCCG
Run BLAST on NCBI

transcript from alignment at scaffold_217:112372..123275-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052530 ID=TCONS_00052530|Name=TCONS_00052530|organism=Clytia hemisphaerica|type=transcript|length=10904bp|location=Sequence derived from alignment at scaffold_217:112372..123275- (Clytia hemisphaerica)
TCATAAGTCCTCCATGCCAGCAAAAAACAATGATAAAGATTCATGCCCAA
GAAAACGTTTTGTGAAACAAAGATGCTACTTTTCCCTTGGTTATCCTGTT
TGTATGTTCTTATCCTTACTGGCACGGCTTACGGACGGCAAAAACAAGGC
GAACTGACATTAACGGATGTTCGCCGAGACCAGAAGCTAGTCTCTAAACC
AATTGCATCCATCCCTGTTAGCAAAAGGAGTCCAGTGTCCTGTTTAACAC
ATTGTTTGGCGCGTGGTGGCAAAGCATTTAATGTTAATTTGGAAAAGGGT
ATTTGTGAGATTTTGGGAGAATCCAAAATGGACGATGATAGTTTAGACAT
GAAAGAGGAAAAAGGTTGGACATACTATGGACCAAAAAAGCGAACTCCAA
CAGAGGTTTGTACAGCAGATGAAAAAAAAATTTTGTTACTAACTTTGTTC
TATTTGTCATATTTAAAATACTCTATGGCAATTCACTTAGTGATGAGTTT
AAAAATATCCGTTGACATTGGGTCTGTTTATATAACTACCCATCATAAAA
TGTTCAGCCCGGGTTAGTTTACTAAGCGAACTAACTAACATGAACTACAA
AAAAATTAGCCTAGGATCAACTTTTTTACGATAGCGCGATTAAGTATAAC
TCGGAAGTTCCTCAAGAGGAGAATTTTCCGCGGGGATTTAATTTGGCGGA
TGGTTTCAGAAATTAAAATAAGCGGAAATTAAATTTGACGGATGAAGGAT
ATTTTTGGTCAAAAAACGCTTTAATATAAGAAAAATACTGTTTTAAAGCC
TGAAATGACAAACAATTGGGGAATGAATAAATACTACAATTTAAATTTTG
CGTGAATTTAATTTTGCAGGCGATGTGAAAAATTAAATTTAGCGGGAACT
TTATTTGGCAGATTTTAATTAGCTAAATCAGCCAAATTTTCTTTCCGTCA
AAATTTCTTCCTTAAGTTTGCAAGAGTAGAAGAGCGTATCTCACGTATAA
AGTAACATATAGAACCTCCTACGGCAATGAATTTTGAACATTCCGAAGAT
ATCGGGTCTGTGTACAGACCATCTCTTATCACATTTTTAAACTCTTTGAA
ACTCCATTAATTTTTTAAGATTTCGAATTTTGGTGATTTTCTTTCAAAAT
AGTTGCCACAAGGTCTACTTAAATCAAAACTATCAGACAGGGAAGTTCAT
TCTGAAGTAGATTTTCACTTTAAGTTAAAGATTTATTCTGCGCATTTCTA
ATTCTACACAGGACTATGAAGATTGTTACAAAGTGACGTCATTGATCAAT
CAAAAGGAACATTGTTGTCCCAAAGGACGGAACGGAGACAGGTGCCAGTA
CCAAGGTATAGTATGACAAAATGGTAATCATGACATTCATGACGTAATGT
ATTCTACGGTTGTTGCCAGAGGTGGCAGGTTTTGAACAATTTTTCTCTAG
TTTAAATTTACCCCATTCTGGCAAAAAAAACGAGTTGCTTCCGTGAAAAT
CGTTCTGAATATCACGAATTTAGCGGCCCTCACTTCAAACTCAACCCCCA
GTAATTAAACTACTACTTAATAGTGGTGCCAACAAAAGCTAAAACTCACA
AAGTAATATTTTGTTCATTTTTATGAATTACCTCGACTCGGGATTTCGAC
ACAAGGGTTTTAGATTGCCCACGTACATTTGTTGAAGCCTACTAAGTAAG
CATAAGAACAGGAATTCTAAAAAGTCATACAATTTAAAAACAACCTCCAC
GTGTTGCCTTAAATATTCTATTCTGAATTCTGCAAAACATTGAAAAAAAA
AAAATCTTTCTTATTTCACAGCCACCTGCGCTCACAAATACTATGGTGCA
TGTCATGGCACAAACGATCTGGAAATTTCAACTTCAAGGAAAAAGTTTTT
AGGAAGTTTCTCATCAACTCACGACTGCTTTCAACAATGCAAAATGTAAG
TGTTTAAATTATTAATTCGAACACGGAAAAGTACTGCCGACCAAGGAACT
TTTAAGATTGTTGATGATAAACTTTGATTTTTACTCCAGGTAACTAATTT
TCGCGGCAACTAATCTTCGCATTTTTGAGTGTCTACCACAAAAATTAGTT
CCGCGAAATGTATTTTTGCTAAAAATTCTCAAAAACCCCTGAATAGGAAT
ATGAAAGAATTTCAGCAAAAAGTAAGTGTCGATCGCGAAAATTAGTTGCA
CTAAATGGGCCAATTTAGTACCCTCGCACCGGGAAAATCAGTCCCCTTAA
AGTATTAAAGAGGGCTAAGTTAAAACATGTTTTATTGAAATCTTCAACCT
CAGAANAAAGTATTAAAGAGGGCTAAGTTAAAACATGTTTTATTCAAATC
TTCAACCTCAGAATTGCATTGTCTTTAGTTTTCAAGCATCCTGGAATCTC
ATTACATACTGTCAAGTCCGGCAAAGAAATACACCAGCAATAACTGTATC
TAAACATATGTCCCTTTTTTTACATTTTTTAAAAACTTTCCGTAGTATCT
ATACACGAACATAAGGCTTCGTTGGCCAAAATACTAAGAACAAGTTAAGA
ACATGTTAAAAAACTTTTAGGCTGAAAAAGTTAACAACATCCGAAAGCTT
CAAAATTTTTGGATGTTCTTATAAAAAAACACGTAATCATTTCTACAAAT
TTATTATCTTCTTTCTAAACCTTGCAGCCCGGAAGAGGGGTGGGGCTGTT
GGTTTGTAGACCGACGTAATAATGTGGCCAAAAAATCGGCGCTTTGAAAA
CGACCCTTAAAGGCTTTCAATGCAGTGACTTTCCCTTAAATGGATAAATT
TTTTGCAAGCAAAATATTTTCGCGACACAAACTTTTTTTTAAATAATATA
ATTTTCGTGGGCCTCTTTTTCAACTAATATTTTGTCTCATTTTCCTAGGG
GTTTTTGAAAAATTTCGGAAAAACTCGCGAAACTTACGAAATCATTGCAT
AAATTAATCCACTTGGTTACATAGTCAAATTATTCATTTTGCCTGACCAC
TCCATAGGCTTTTTAGTCACGTGATTTCTAACTTGAAAAAGAGGCTCCTC
CGAAACTATTAACAGGTTTTTGGATTAGTATATGTAATCACATGATAACG
AGTGCAATTCGAGAATAATTGCACGAGTGACTTTTTTGTTATTAATTTTC
CGAGTCCGAAAGGACGAGGTAAATTCGAAACAAAAAAATCACGAGTGCAA
TTTTCGAATTGTACGANACGAGGAAAATTTGAAACAAAAAAATCACGAGT
GCAATTTTCGAATTGTACGAGTTATTATGTGATTACGAGCTAATCGCACA
ATTTTTTCACTACTTTTACCCCGTCAGGAAAGTAAATTACACTGAAAGTT
TTACATTTTTCTCTTATCTTTATGTTTTTTTTTTATTGTTTGCTTAAAGA
TTTTCTTTCTCAAAAAATGAATTTCGAATGCAATTTTAAAAGATTCGATA
AAAACATGTAAGAAAAAACATTAAAGTCAATTTTGTAAACATTGGCGCCT
CATTGAAGAGTGTGATTAACGATTAATTGCTCTCTACAGAATGCAATTAA
CGATTAATTGCTCTCTTTGAAGGCGCGCCAAAGAAGAAAAAATAACTCAT
CGTGCGATTACTGCTATAAATTTATTCATTCTTTGCCACGGAAAGTCATG
TGATATGCTTTTCAACCAATAGGATTTAATTACTGCGAGGGGAAAACAAA
CAAACACTATAAATTTATTCATAGGGTTGCTAGGCTTTTTGTATCCTGAT
TTCCCCCAATTCAAGTTTTATTTTAAATTATATATGACTTATGATATATT
TATGACGTTAGCATGTAGTGTTTTATGACAGAAAAGATGTTCACTTTCTT
CTTTTCTCTCATCAATGTCAATATGTAACAAAAACTTTGACCATGTGACA
GCTTCAGTATAAACAAGATAAAACTTAATCCGAAAAATTGATTTTGTCAT
GGATCTATGTGTCAAGTCGGATCACAGGCAACAAAATTTTCATTTTTTGA
AAAACTTATTCACTCCTTTTTTTATAAGCACAACGTTTATAAGCTGTAAG
CATACTTCGATTAGAAAGCATACATCCAACCTGAAATTCAAAAAAATTCG
TGCAGCTATTTTAAAACGCTGACCTTTTTAGGGTTATTTTTAAAGCTGTT
TGAGCTTTCTTAGGCCAAAGATTTTCGCCTGCGGAGCCAAATTACAAAGA
AAACTTTCATTCTTCGAGCCGAATCAATGTTCCGACTTAAAAATTCGAAT
TTTTCATGAACCCAAAGAAAATCAACAAATCTAAACATATCAATAAACAT
AAATGAAGAGTGAAAATATACCAAAATTGTAGTCTATACCCATAAAGACA
CTACATTCAGATAAATGGTGTGTATGTGTGATGTTTTTACATGCTTTTTT
TATAAGAACATCCAAAACTTTCGAGGCCTTGGGATGTTCTTATCTTTGTG
AGATTTAAGCCTGAAACTTTCAAAGCCTTATGTTCTTAACTTGTTCCTTA
TATAGCATGTATAGAACTTTAGAATCATAGTCCGTATAAAAAGCCCTGGT
ATGGAAGCCTATTGTTGTAGCTTTTTGTTAACTTTTTTCTTTGTTAATAA
CGATTATAAAAATCGATCTGCTCAGTTTTCGATCACGTTACCAAGTACTC
CTCTTGGGATTGGTTTAAGATTTAATCACATGATTAACAAGTGATACTTT
TATGGACCTACCTGGTTATGCATTTAACACATATATAATTGATATCTACA
TGAGCGTGACCATTAAACAATCATTCAGAACACAAATAGTGACAATCTAT
TAAAATTAGTCGTTTGTTTCTTATAAAAAAACGTTTCGAAACCAAAATTT
CATGCTCTTGAAATATTTTTTCATATTCAAGACTTCGAGAGCAAGTATCT
CATCAAAAAATTCAGTAATTTCAAGAACATTGATGTATGCTTATTAATAG
TGATTCTTATAGATAAAGATGCGTCTTTTGAGCTGAAAAATTCTTTTTTT
ACAAAGATCTGCTTGAGCCATCTTTTACCTACTTTTCATGCAAAAAGTCA
GAAAAAAACAATGATCCAATATTTCACAAAATCCAAAAAGACCTTTTTTA
GCCGTTTTTTAGCTGAAATTTACCCCCAAATTTTTTTTCCAAAAATCGAG
TTCCGCCACATTCGATGGTTTATAGTTATGCATCTTTGTGCAAAAAATCA
TAAAGAATAAAAGAGCCAATCTCGAGAAAAGCTAATACCTAAGTAATTGA
TAATGTGCCATCTTTTACCTATGATGGTACCCTACTTTCATGCAAAAAAT
CAGAACAAATTAATGATCTAATTTTTCACAAAGTCCAAAAAGCCCGTTTT
TTAGCCGTTTTTTGGCCCAAATTTGCCCATTTTTTTTTTCGAAAATCGGG
CTCCGTCACATTCGAGGGTTTATAGTTATGCATCTTTGTACAAAAAATCA
GCAAAAACTAATGAGCCAATCATGAGGAAAGCTAATAACGAACGAACGGA
CAAAGGTTAATTTATAGGACCTCCACCGGGGTAGGTCCAAAAAGTGGGCA
AAACAAGATAATTTCTCTTATCGTTTCTTAAACGGACTATGATAGAACAT
GAAAGATTTTTAATTTATCTTCATATTTCACAGCCACACCTCAAAAAGCC
CTGATGGTGCAGCATGCGAATCATTGGAGACTGTAAACGGCCACGATTGT
TACGTCATTCCAAGAGGAGCCAAATATGGAAAAGCGACTATAACACACGG
AGCTTATTACGCGAATTGTTGGGTATTCACTAAATGTGATGCAGGGAACA
AAAGTAAATTTCAATACACCTTTTCGACCGTAACCACCAATTGCCACGCG
GGCATTTCTTGTCCGCTTTATCCCACTAAAACCGTCTCAGTCCTTTTTTC
GCACCTATAGACAATAGAAAAATGTTTCAAAAAAGGATTGGATCGAGTTT
AGGGGGATGATTAAATAATTAAGTGGCACGCGCCTGACCGCGCGACTACG
GTCGAAAAGGTGTATACACTTTTCTCTAAATCCATAAAATAATTGCGAGC
CTCGTTCTCTGAGACTTGTTGCTACGATACTTCAACGTCGTCAGACATAA
TTAATGTTTGCAAGCGTTTGCAGTTTTGAATCAAATTGTGGAAAACGGTC
TTTTGGGAAAACATATTACATGTTAAATGTTGGTTGAAGTAATTATTTCA
TTTGAAAACGAGGCCCGCAATAATGCTGATTAATCTCGAGAAGTGTGTAT
ATCACTGTGACTTTATTTTGAAAGGAACTGGAAAATTAGCAAAAAGACCC
TTGGATAAACTTTACATAGCTTAAAATGACGTAAATGACTTCGTAAACAA
ACTGTGTTGATTTTACTTTTTTGTTCACACATAACTTAAAATGACTGTGG
ACTTACTATATACTAAAATCAGTCTTTTAACCTACTTAAATTTTAAAATA
ACTTTTTACCCCCTGGAAAAATAAAAAAACTCCTTTAGACCCCCTGGAAA
TATTCGTCCACTCCCATGTATGGATACAGAATGGTACGGCCCAATGAGAG
TTGTGTACACAAAAAAGATTGCTAACTAATCAAACTAGGTTTAAGTGTCT
TGTCACCAATGAAGAAAATAACTTTCAAAATATTCAATTTCCAGTTTTGA
CTTGCGATAAAAAGAAGGTGCCTGACGGATAAGAAAAGTCTAAACTAGCT
GTACTCTTTTTATAGCTTTAAGTTGCCATTTTGTTCATCGCGAGGCAGTC
ACTGGTTCCGGAACGACACAATACTCCCTGGGCGTTTTCAATTCAAGGGA
GCTTTGCGCCCATGCATGTTACAAGAAGAAAAGAGATGATACTCAAAACA
TCAATGCTGTTACATACTATGGTGACACAAAGTAAGTAAAATCAATTCAC
CAGTGATTATATCTGAGACATTCTAAAGATCTTTATAATAAAGTCTAATT
CAAAATAATCTAATGTAGACGGCACAAATGGCTTTGAAAATTGGATTGGT
AATCTGCAATCATCGTCAGAAAATAATGGCAAAAAAGGAATTTCGCTCGA
AATTTTAAAAACCGCAAGTAGAAATTTAACTGAACCCAACTATTTGAAGA
TTTTTTGTTAAAAACTCTGAATAAACATGTTTTATCTTCTTTCCAGAGCG
TGCACCTGTTACTCGGGCGTCAGTTCCATCAACGCTGCAATACCGACAGA
TCCTGAGACAGTTTCGTGTATCATCAACACTGAGTCGTCGAAAAAAGGTG
AGCAAGTTTAAACCAGGGTGGACAAGTGTTTTGCTGCCAATTTTGGGAAT
TGACTAAGGTTAACATAGCCTAAGTACTACCTTCTATTCTTTGTCGTGCT
ATTTGAAAACAATACATTGGCATTGCATTGAAAGAGGACATTATGTCCCT
GAAAGAAAAAACAGAGTATGAAATATCCAGATGATTAAGAATTCGCGAGA
ATACAGAATAGTTATCTGATATTTAGTCTAGCAAGCTAGACGACTAATTT
ATACATAGTAGAAATAAAGCAAAAAGTAATGAATGGAACAATTTTAGTCG
TCTAGAAACCTTTGTACACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGATTCTTCCAGTCGTTTATACAAACTAA
ATCCCGTATTATTATTATTAGTATTGGTATTATTAGTATTACACGCATTA
TAAACGACTCCAGTCTATCTGATATTTTGATGACGGCCGCCCAAGCAAAG
AAGCGGGCCAATTTCCCATCGGAGAGGAATGTTGCATCGGCCTTTGATAA
GCCGTAATCCCAGTGGGGTTCAAATTTGCGCGTAAAGTTGAAAATATTGC
AGTTAGACCCACCAATCCCGAAAACAAGGAATGGGTTACCAGGCCTCCCG
TTGCAAAATTCTTAACGTGGTCTTGCAAAACTCCGTAATGTAAACCTTAC
AGATGTTGAAAAATTTTCCCGACTTTAGAAGTCAGTCCGGTTACTTTTGA
TTTTTAGACACAAGCATCACTGTTCTCGCGGTGGATCATTCGAGTCCAAC
TGTGGGAAAGTATTTCAATTTTGATCGTCACATAATTAGCCTGGGCGATC
ACGAAGAACGAAGATTTCTAGCCTACATTCCACGAACAAAAACAACCGCG
GAAGTTAAAGTCTGGGGTTATGTGAATGGAGGAAGTCGAGGAACAGCTCA
CGGCAGATTTGCTTCGTCTCCAGCAAATGGACAATGGAGAGTTGGAGATA
AAATTGTCCCTATTGATCTTTCAAGAGGTATACTGTATTCACTTTTTGCA
GGAAACGTCTTGGTTGAAAGTCCTCTCTCCTCTTCTATGAACTATCAAAG
TCGCGTTCTTTACAAAACAAAAGAAAGTCCGAAAATATTTACTCTGAAAC
CATCAAAATATTTCGTATCCTATCTAATATATCATTCAGGCAAAAAGCAT
ATAGCATATTTTTTATAGCATGTTTTTATGAGATCACTTCATCTGTTTAC
TTCATTTTTGATGGTTTCAAAATGAATATTTTCGGACTTTATTTTGTTTT
TTAGTTTTAAAAATTATCGGCTGGTTATGGAATAATGATTTACTTTCGGT
GAAAAGTAACGTAAGAATGCGATTTTTTTTTACTTTCTATATTCAGCTAA
CTTTCCTCTTCCTTTTGAGCGCTTTATTTAGGAATGGCGGACGAGAGCGG
TAATTTTGCAGCCCTAATTTACGCCGGCCCTTTTCGTCGTTGGCGTAATA
AGGGCCGGCGTAAGTGATCGGAATTAAATTAGTGTCAGGCTTAAAAATGG
AACAATCTATCGTAATGAAGGCCGGTTTAAACCAATATTTATGCATTTTT
TAAACCGTTATTCTCTATTTGTATGTGTGTTTCAATATAAAAGCATAATA
CGATTACATGTAGAATGGCAGGAAATCATAACGAATCAATTTGGCTCCAT
TGTCCCAAGGACAAAATTAGCGTGTCTTTTGGGTTTTTCCCTCACTTTTT
GTCCTATGAAATAAAAAAAGAAACCAGGAGACGCGCACTTTTTTTCTTGT
GTTGGTGGGATAAAGCATGTTGCATTGCACCAACGCGAAAACAACTTCGT
GTCCCCAAGCCTTTACAGTGTATTTTGGGAAGCTTTGAAAAAGGAACCTA
AAAGGCTGCACGTATGGTCGGTCGTTTACCTTGAGTGCCCTTTCGTGATT
TATTACGATAAAGCTCAAATTATCTTCTTTTTTATCAAGTAAACAATACT
GTATTTTACGATTTCACACATACACATTTTCTATACTTTTCGTAACGTTT
TTTTTTTTACTTTTTTCTACAGATTGATTTTCATCTACTGTAATATGTGT
AAAACGAAATGTTAGATTGAACGATACGTAACGCAAGCTTTAAAGCCAGT
ATATCTATTCACGAGTCTGTTTGCTTATTCTGCAAAAACATTCCACAGCT
CCATTAAAAATACAGACAATTCATTCCAATTCTTATTCCACACTTTGCAG
TCAAAACATTGTAAAACTCTCTGGTTATTAAAATGTATACAGTATTACTG
AAGAATTGAAGTGAAGACATTACAGTGTTGAATCGGACAATTAACTTACG
TCACGCGCTATCTTTAGTTTTGATGATTGGTTGAATAACTGCACTCTCTA
TGCAAGCTCAGCATTTTTGATGCAGTGATTCAGACCTCGGAAAACATAAT
GTCAATCTGGCTTTAACATAAAATATATTAATTTATCCGTTATTATTCTA
ATCATAATTAGAATTTTCTCATGTATATAATTTTCTAGACAAAACTGTTT
TTTGGTCACATCTTATGATTGTACGCAAATGCACGGTACAACTTTTTGAT
TTTTTTTCATATTTATGAAGCACTACCACTGCAACGTGCACTCTTCTGCA
CATTTGTTATAAATACTGATCGTAATGAAATATTTTGCAATTCACCGAGT
CTCTTTCGCTGAAACTTAAAAATTATTACAGAAGACATAAATACACAATT
CCCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033217XLOC_033217Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052530-exon-scaffold_217-1575043694:122871..123275TCONS_00052530-exon-scaffold_217-1575043694:122871..123275Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:121921..122014TCONS_00052530-exon-scaffold_217-1575043694:121921..122014Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:121331..121454TCONS_00052530-exon-scaffold_217-1575043694:121331..121454Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:117473..117642TCONS_00052530-exon-scaffold_217-1575043694:117473..117642Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:116395..116560TCONS_00052530-exon-scaffold_217-1575043694:116395..116560Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:116029..116129TCONS_00052530-exon-scaffold_217-1575043694:116029..116129Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:114099..114368TCONS_00052530-exon-scaffold_217-1575043694:114099..114368Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1575043694:112372..113053TCONS_00052530-exon-scaffold_217-1575043694:112372..113053Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:122871..123275TCONS_00052530-exon-scaffold_217-1510915933:122871..123275Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:121921..122014TCONS_00052530-exon-scaffold_217-1510915933:121921..122014Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:121331..121454TCONS_00052530-exon-scaffold_217-1510915933:121331..121454Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:117473..117642TCONS_00052530-exon-scaffold_217-1510915933:117473..117642Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:116395..116560TCONS_00052530-exon-scaffold_217-1510915933:116395..116560Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:116029..116129TCONS_00052530-exon-scaffold_217-1510915933:116029..116129Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:114099..114368TCONS_00052530-exon-scaffold_217-1510915933:114099..114368Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1510915933:112372..113053TCONS_00052530-exon-scaffold_217-1510915933:112372..113053Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:122871..123275TCONS_00052530-exon-scaffold_217-1491911889:122871..123275Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:121921..122014TCONS_00052530-exon-scaffold_217-1491911889:121921..122014Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:121331..121454TCONS_00052530-exon-scaffold_217-1491911889:121331..121454Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:117473..117642TCONS_00052530-exon-scaffold_217-1491911889:117473..117642Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:116395..116560TCONS_00052530-exon-scaffold_217-1491911889:116395..116560Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:116029..116129TCONS_00052530-exon-scaffold_217-1491911889:116029..116129Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:114099..114368TCONS_00052530-exon-scaffold_217-1491911889:114099..114368Clytia hemisphaericaexon
TCONS_00052530-exon-scaffold_217-1491911889:112372..113053TCONS_00052530-exon-scaffold_217-1491911889:112372..113053Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_217supercontigscaffold_217:112372..123275 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0715077	0.0880803	0.179482	0.463861	0.0530712	0.0869716	0.336836	0.36453	0.117534	0.309308	0.163463	0.27333	1.55321	0.994053	1.31182	0.920582	1.66443	1.474	7.05991	8.76046	2.60022	2.20992	1.06038	1.33051	2.17558	3.04758	1.8692	0.61016	0.478546	0.726125
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052530 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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