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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052525 ID=TCONS_00052525|Name=TCONS_00052525|organism=Clytia hemisphaerica|type=transcript|length=1211bp
NTAAAAAGCTCAACGGGCCCGTGGCCTGTTCAATCTTCCAGATCCATGAC
AAATATGTCAAATCATTAACAACTCCACGTCCACCAACAGTGGCAAAGCC
AAGAGATGATGCTGCTTTCTTAGTCTTAAACAAACCACGTGCTACCTTTG
ACACCAGGGCTTTCTCCAAACGTTATCCATCTTGCATTGAGCAAGTCAAG
GCTATTCGGGAAAAAATCGACATTCGCATTTCAACTCCATCATTTTGATT
TCACATGAAGCCAAAGCGCAGActgaagaatttgaaaaatattttaatct
ttGATTTCCCTAATAGGACGGTCTAACGGCCTACTCCATTGAAACTCTTA
TAAATTCTATGGTCTTTTTCTGGTCTAACGGTCTAAAGAACTGTCTTCAA
GTTTTGCACCTGGCATTTCGAATTTCACATCACACTTTGAAATTCTTAAA
CATTTTTGAGCCGTTAATGAACATTTTTGACCTTCCTTTTCCAAATTGGA
GGTCTAACGGCCTACTCCatagaaactcttataaaatcaacggtcttctT
CTGGTCTAACGATCTATAGAACAGTCTTAAAATTACCTACCGGGGCATTT
TATTTTAAGAGGGAATTTGagcttttgatacatttttacttgttttcact
ttgattctcaaaatttagcggtctaacggtctcttctatagaaactctca
taaaatttacggtcttcttatggtctaagggtctacagtATGGTCTTCAT
TTAGAAAACATATGTTGAATTTTAAAAGCGAAACTTGGCATTTTCGGACG
ATTTATTTCAGATTTTCTCTTTCAGTTTCCATGATTttaccggtctaatg
ggctattctatagaaactctcatataaacttcggtcttcttatggtctaa
gggtctacagaatggtcttcactttattgaaatatttttaccctgaaaag
aaaaactctgacattttcggacgatatttttcagatgtttcactttagct
accatgattttataccggtctaatgggctactctatagaaactctcatat
aaacttcggtcttcttatggtctaagggtctacagaatggtcttcacttt
attgaaatacTTTTACCCTCCAAAGAAAAACTATGACATtttcggacgat
atttttcagatgtttcactttagctaccatgattttataccggtctaatg
ggctactctat Run BLAST on NCBI transcript from alignment at scaffold_217:283185..284495+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052525 ID=TCONS_00052525|Name=TCONS_00052525|organism=Clytia hemisphaerica|type=transcript|length=1311bp|location=Sequence derived from alignment at scaffold_217:283185..284495+ (Clytia hemisphaerica)
NTAAAAAGCTCAACGGGCCCGTGGCCTGTTCAATCTTCCAGATCCATGAC
AAATATGTCAAATCATTAACAACTCCACGTCCACCAACAGTGGCAAAGCC
AAGAGATGATGCTGCTTTCTTAGTCTTAAACAAACCACGTGCTACCTTTG
ACACCAGGGCTTTCTCCAAACGTTATCCATCTTGCATTGAGCAAGTCAAG
GCTATTCGGGAAAAAATCGACATTCGCATTTCAACTCCATCATTTTGGCA
AATCTTGtaactttctgtttttttaagGAGAAATACAAATTAAAATTCGT
GTTGATCAATAAATCTGAACTAACTTTCTTCAACATTTCCACCATAGATT
TCACATGAAGCCAAAGCGCAGActgaagaatttgaaaaatattttaatct
ttGATTTCCCTAATAGGACGGTCTAACGGCCTACTCCATTGAAACTCTTA
TAAATTCTATGGTCTTTTTCTGGTCTAACGGTCTAAAGAACTGTCTTCAA
GTTTTGCACCTGGCATTTCGAATTTCACATCACACTTTGAAATTCTTAAA
CATTTTTGAGCCGTTAATGAACATTTTTGACCTTCCTTTTCCAAATTGGA
GGTCTAACGGCCTACTCCatagaaactcttataaaatcaacggtcttctT
CTGGTCTAACGATCTATAGAACAGTCTTAAAATTACCTACCGGGGCATTT
TATTTTAAGAGGGAATTTGagcttttgatacatttttacttgttttcact
ttgattctcaaaatttagcggtctaacggtctcttctatagaaactctca
taaaatttacggtcttcttatggtctaagggtctacagtATGGTCTTCAT
TTAGAAAACATATGTTGAATTTTAAAAGCGAAACTTGGCATTTTCGGACG
ATTTATTTCAGATTTTCTCTTTCAGTTTCCATGATTttaccggtctaatg
ggctattctatagaaactctcatataaacttcggtcttcttatggtctaa
gggtctacagaatggtcttcactttattgaaatatttttaccctgaaaag
aaaaactctgacattttcggacgatatttttcagatgtttcactttagct
accatgattttataccggtctaatgggctactctatagaaactctcatat
aaacttcggtcttcttatggtctaagggtctacagaatggtcttcacttt
attgaaatacTTTTACCCTCCAAAGAAAAACTATGACATtttcggacgat
atttttcagatgtttcactttagctaccatgattttataccggtctaatg
ggctactctat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052525-exon-scaffold_217-1491911889:283185..283431 | TCONS_00052525-exon-scaffold_217-1491911889:283185..283431 | Clytia hemisphaerica | exon |
| TCONS_00052525-exon-scaffold_217-1510915933:283185..283431 | TCONS_00052525-exon-scaffold_217-1510915933:283185..283431 | Clytia hemisphaerica | exon |
| TCONS_00052525-exon-scaffold_217-1575043694:283185..283431 | TCONS_00052525-exon-scaffold_217-1575043694:283185..283431 | Clytia hemisphaerica | exon |
| TCONS_00052525-exon-scaffold_217-1491911889:283532..284495 | TCONS_00052525-exon-scaffold_217-1491911889:283532..284495 | Clytia hemisphaerica | exon |
| TCONS_00052525-exon-scaffold_217-1510915933:283532..284495 | TCONS_00052525-exon-scaffold_217-1510915933:283532..284495 | Clytia hemisphaerica | exon |
| TCONS_00052525-exon-scaffold_217-1575043694:283532..284495 | TCONS_00052525-exon-scaffold_217-1575043694:283532..284495 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_217 | supercontig | scaffold_217:283185..284495 + |
Blast
The following BLAST results are available for this feature:
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