TCONS_00052512 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052512
Unique NameTCONS_00052512
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3523

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052512 ID=TCONS_00052512|Name=TCONS_00052512|organism=Clytia hemisphaerica|type=transcript|length=3523bp
aatttaatATCCACGCTATTCGGGACTTAGAATTTCTGCGGAAACAAAAC
AACAGGATCGTTGATGACAACTAGAATTTTCCCTGCGGAAGCTTACAGGC
GCCATGCTGAAATGGTAGAACTTAGCTGCAGCAGATTCTTTTGACAATGG
AAGTTATAGAATGTTTATATACAAGgatcttgacagaaaatcctttgctT
GATTgtcactttatagttttgattcccgtTGAAGAATcgtattctggttt
tcatgtttcTAGATGCTCTTTTAGAGTGTTAGAGCTAGTCTGTCTAGAAA
ATTTGTAGTTTTGATCTGAACTAATCTAGTTAAGCTCACTGACAGATTGA
TCCTAAAGGTTTATCTGAAATTGAAAGAGGTAATTGATCATAAAGTATGT
TTTATATTTATTGTTaccaaaaatagaaataaaatctCAATGGCATTAGT
TAACTGCAGCACTATTGATGTTCAAACCAAAGAAGGAGTGGGTTCTATCA
ACTTGTGTATTGGAAGTATTACAAAATGTGAAGATGTGGTGATTATACCC
CAGTCCATGGCACTGTAATAGGAGCCTTACAAAATGATCTGGGTATTAGA
GTTCGGGAACTTgccaagaaaaaagaagaagaccAAAGGAAGCTTTTATC
TTGTTGGTGGAGTAATGAATTACCGAAAAAGTCGAAATTCAAACGGATTA
TGTGCTTTGAAGGATCTTTCAAAAAGAACGCCCAGCCGCCCTCGACAGTT
AGTGAAGTCTTCCGTTCACTGGTATCTCTATCTAAAGAAGAACCGATAAG
CGTTATGATGCCTTTATTGTCTTCTGGAAATCAGAGATATAATCAAAAAC
TGATGCTTCGCTTGATCGTGGAAGCTTCTATTCATTGGATGGAAATTGGT
CTCCCAATGAAAGAACTGAAAATAGTTTTGTATCAGCGAGACACAAGTGA
GGTATCGAaagtcaacaaaattttggtggACCTGTTTGAAGAAATGAGGC
AAAAAACCAACAAGCTAGCGATGAAAAATaaaaatgaattCAAGTATGAC
TTCTATTTGACTTATGCACCTGGAAACGATGAAGTAGCTGCAATGGTCGT
CAAATCTATCAAAGAAATACAACCGAATTATAAAATTCACGAAGAACGGC
AAAAGATTGACCCGGAGAAAGCATTCCAGGACCACATTTACGAGACAATG
TCTACTTGTGCCCGAGTGATCGTTCTGTTAAGTCCAAACTTTATGGACGA
CGTGGCGTGTATTGAGAAATACAACATTGGTATGTGTTATGCACGGAACA
CACGACGCAATTACTTAGCCCCCATTTACATAGAGGAAATATCAAACATG
CCAACTTACATGGGGCTGATTCAATACATAGACGCAAGGCCTGTTTCTGA
AGCATCTATCCAAAACGTTTTAAGCACACTCTGTGTTGACCAGAAACCTA
CCAAAGATGTAAAAACCACACAACAACAAGAACACTCACCAAAACAAATC
TCCTTAGAAAACGCTTACGATCTCTTCATCTCATATTCACATCAAAATTA
TGACGTAGCATTGAAAGTGTATCACGTGATCAAAGAGCAGAAACCTCATT
GGAGGATATTCTTTGATCAAGATGAACTAAAAGCTGGTCATTCTTGGCAA
TCCAAATTATATCATAGTATTGagAGCTCAAGGATTGTGATAGCATTGAT
CTCAAAAACCTATCTGCAATCCAAAGTTTGTCAAGAAGAATTCAACCTTG
CTCAAAGCCTTTCGATGGATCATACTCTACCTCACAGTCTACGATTATTT
AGAGTTCGGTTAGAAGATTTTCAAGAATTGCCACTTTGGTGTGGAAGCAA
GAAAAACATGTTCGATTTTACGGCCAAGGATCCGGCGAACTTAAGTAAAT
TTGTGATGTATATGGATCATGAGTTCGACAACTATTTATACCTGAGTGAA
CGtgacattttgaccatcgatAATGTTACTTCTAAATTCCGAAGTGAGTT
TGCTCGTAGTAAATATCCCATAATACCGGATGTAGACTTTACTCAAGAAT
GTGGTATGCAGGAAAATTTAAATTCATCTCAAAGTGGGTACGATGTCATT
CTCATAAGCCATCAAGATCATATAACGATTGTCCAATCATTAAAAGAAAG
GTTACTTTGTAAAGCGCCGTCTCTCAAAATATTGCTGGTAACTAACAAGG
ACGAAAAGACGATTCGTTTAAATGTGTTTGATGAAACTCGCCTGGTTATG
TCGTTTCTTGGCAAGTCCTTCTTTGAGGATGTTTTCCTCATGGAGCAATT
CAATACTGCTTTGTACAGACATCGATTCAAAGAATATATCATTGCCTGCC
CTGTGATTCTCGGTGAATTGCCTGCAATGCCGGTATATCCGAAACTATCA
TTCTGCTTGTTTTCACTAACCGATAAACAATGGCATAATAAAGATGGTAA
AGTTTCTGTTGAGCGCTTTGTTGATAATGTAGCGTCTGTGGTTAGtaata
ttctatttttaaaaccCACCACAGCTACATCctttaaaacattatttaat
ATATTGGAGCTTCGAGAATGGGGCGATGAGACTTATGGTGATAGAAAGAA
ACTCAAACCGCTAGCTTTTGATGGTGCAATGGTTGTATCCGCAAATGACC
GTTCAATTATTTCTGTAAGAGATTCAATGTTGATGGTTAGTGGTAGTCAC
GCTCTATCATCGCCAGAACCTATATTAGAAATCACATCATCTGGGTTAGA
ATATTCAATACCTGAGCCAAAAGAACCAGAAGAGAAATCACCAAATTTGC
AACAACAAGCCGAAAAAACAGAAACAACCTCAACAGATTATGTTGAACAG
AAGCCTTCAGACTCACCAAGATCTCTCTTGCTAATAAAGAAGGAAACAAC
ATTTAAGAATGGCCAAGCTCCGCCGAGAAGTGAGGTGGCAACAATCTCAA
CAGAATACGATAGACAAAAGGTTTTAGATTCCAATGAATCTTGTTCATTG
CCGATAACGAAAACACCGCCACCGAAAAGGGAGGCTGAAGAACCAGAGTT
ATTAGAACAGGCACCACCAACAGATGTTAACTCTGGTGAGATTCCTTCAT
CAGAACTAAATCAAACAAATGAAGCAGATCCTCCGAATAATAAGGCGAAT
GATAGTCGACTGAAACTCAAACGACAGAACAGCAAAACGTGTTGTATTCA
CTGAGGATTATTACTTCATTTCTACTGTAATATAGGTCACTGTTTTAATA
CTGTGTAGTTTCGCTCTGACATGGCTCTGACATAATTTGCAAACTATTGA
AATTGCTTTGTTTTAGTAAtacttaaggcttggggacacgagaagttttt
tttcgcgttggtgcaatgcaacatgccccatcccaccaacctgaaacgct
ttttCGTGGCTCCaacccatttttcttttaataacatttgtgcttcCCTC
ATGACAAAATCAGcttgtcttttgggtatttccctcattTCTTGTCTcat
taaacaaaaaaagaaaccatggg
Run BLAST on NCBI

transcript from alignment at scaffold_217:58945..72938+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052512 ID=TCONS_00052512|Name=TCONS_00052512|organism=Clytia hemisphaerica|type=transcript|length=13994bp|location=Sequence derived from alignment at scaffold_217:58945..72938+ (Clytia hemisphaerica)
aatttaatATCCACGCTATTCGGGACTTAGAATTTCTGCGGAAACAAAAC
AACAGGATCGTTGATGACAACTAGAATTTTCCCTGCGGAAGCTTACAGGC
GCCATGCTGAAATGGTAGAACTTAGCTGCAGCAGATTCTTTTGACAATGG
AAGTTATAGAATGTTTATATACAAGgatcttgacagaaaatcctttgctT
GATTgtcactttatagttttgattcccgtTGAAGAATcgtattctggttt
tcatgtttcTAGATGCTCTTTTAGAGTGTTAGAGCTAGTCTGTCTAGAAA
ATTTGTAGTTTTGATCTGAACTAATCTAGTTAAGCTCACTGACAGATTGA
TCCTAAAGGTTTATCTGAAATTGAAAGAGGTAATTGATCATAAAGTATGT
TTTATATTTATTGTTaccaaaaatagaaataaaatctCAATGGCATTAGT
TAACTGCAGCACTATTGATGTTCAAACCAAAGAAGGAGTGGGTTCTATCA
ACTTGTGTATTGGAAGTATTACAAAATGTGAAGATGTGGTAGATGTTCTG
GTTATCTCTGCATATCCtggtttgagtttttttttgaacaaatttttagc
ctgattacaaaaaattaaatacatCTTTTTATACATCTGATGATTGTGAT
TAGTAGAAACTTGAAGAAACTTTAGGAGTGCAACCTTTCATTGGAAAAAA
CAACACAGTTGAAAAATTGCGAACTTTTAAAAACAAGTTCAGGgaaaaac
gtttttcaaaatccaTTAATATAGGACttgaaatctcaaaaaataaaaat
cttagcGTTATTAATGTAATAATTTTATTTGTTGAAAATGCGTAGAAAAT
AATTATGTGAGCATGTGAAAATCCGCTTTTGGAAATAAttaatatttgtt
tattttatattgATATCTTGTTTTCTTTGTATTATCTAATTTGGAAGACT
TATTAAGTTAATGATTaggaataattaattttattgcTCTTTTTAGGTGA
TTATACCCCAGTCCATGGCACTGTAATAGGAGCCTTACAAAATGATCTGG
GTATTAGAGTTCGGGAACTTgccaagaaaaaagaagaagaccAAAGGAAG
CTTTTATCTTGTTGGTGGAGTAATGAATTACCGAAAAAGTCGAAATTCAA
ACGGATTATGTGCTTTGAAGGTATTTGATATAACGATTGTTTTAGTTTAA
CATGTAACTTCCACCAATAAGTACAGAAACAAAATTTCGGATTGCGTAAG
GAATTACCTACACATTCGAACATTTTCTTTTATGATAGCAGACTTTTCTT
ACTTTGGAAAAAACTGACAGACCCCTATCATTAGATATTATAATACTGAG
GTTAATTTTTGTAacaattttaaataatttcaatcGGCCAAGCAGCCAAG
CTGTAAAAGATTCCAATTTTAATTTGGTAGCTCTGATCACCAAGAATTGA
TTATTTATCTTGCCTCCATTCAGTAATTTAAATGCAGCTTTAGTAAAATA
ACCCGTGTCCCAAAAATTCGAATGAGTAATAGGAAATtatcttcaaaaac
aaattagGAAATTTTGTAGCTGATATGGAAATAAAACCACTCAAATGATT
CTAATGTTTTGAGGATTTctgttatgttttttttttctcgttttaaTGTA
TAGGATCTTTCAAAAAGAACGCCCAGCCGCCCTCGACAGTTAGTGAAGTC
TTCCGTTCACTGGTATCTCTATCTAAAGAAGAACCGATAAGCGTTATGAT
GCCTTTATTGTCTTCTGGAAATCAGGTATGGTGAGCAAACTATTTTAAAG
TTGATTTACATTTCTGATTAAATTTAGCGTTGGGTATCGAGCGGGGTGAT
TAATTCGTAAAAACCCTGTATTTTTGTATTCACCCCGgtgaaaaataatg
tttttgatcGAAAAAATATCGTTCggctttttaaatttcattgtaATATT
GAGCAAATTGCTAATGTTAAGAAATTAAAGCTTCATAAATTGAATATGAG
TTACTTTTCTCGACTAACTTAGCTTAGCCAATGAAACACTACTGGATCAT
CTTTTGATGATCATGCATCTTTATTGATCTTTTTTCTGTTGTTAATTACT
TTTGGGTACTTTTGGTTGTCTTTGAGCATGTAGCTCTGGCAAAAATCTTC
GTTAAATCTACAATCGCTGAAATGAAGGAAAAATGATTCAGCAGAGAGAT
TTCATGTCTGAAATGTTTGCAATGTGATCCCTGTCTCCTGCTTCATTTTA
ATTATTCCAATCTTTTTTTCTGCAGAGATATAATCAAAAACTGATGCTTC
GCTTGATCGTGGAAGCTTCTATTCATTGGATGGAAATTGGTCTCCCAATG
AAAGAACTGAAAATAGTTTTGTATCAGCGAGACACAAGTGAGGTATCGAa
agtcaacaaaattttggtggACCTGTTTGAAGAAATGAGGCAAAAAACCA
ACAAGCTAGCGATGAAAAATGTAAGTTTAAAAATCAAAGTTCATTTGCTT
TGAGATATTTTTTGTTTGCCCTTTTCCAACTGATGCCTTACATCTAATAA
ATAATATTTCGTTGAAAAGGTAATTGAAAGCACAATTGTTGTTCATCAGC
GGTATATAATTATTCGTTAGAATTGAAGCTTCTACCGTTGAAAAATACAC
ACTTAGATTAGTGCAAAGGACAGATATCCATTTTGTATTATTATCAACTA
CCTTCCTtcatataaatttcaaattgatttcgTTAAGGATGACCAAGTGA
TAAGATAACCAAAGTGAAAAATTTGGTTACGTGATCAAAAATTAGTAAAG
AGCTTAAGATAGCGATCAGAAACCAACTAGACGtccatttgtttatattt
ctcgTCGGGAAGATTTTCGATGAGGAGAActccaacctcgttccctgatg
cgtattatcagcttttttatgcttactgatagcgctagaaaATATATTCT
CTGGCTGTCTCTCTGGCGTCAAtgcaatcagtaacgtaaataaagcctgg
gatacacggggacgaggttgggtaTAAAGTTTTATTTAAAAGTTGGGAAT
CGAAATGTGTTCAGTATGTGTTACAAGCCAaagaaataacaattttttac
atcatttttagaaaaatgaattCAAGTATGACTTCTATTTGACTTATGCA
CCTGGAAACGATGAAGTAGCTGCAATGGTCGTCAAATCTATCAAAGAAAT
ACAACCGAATTATAAAATTCACGAAGAACGGCAAAAGATTGACCCGGAGA
AAGCATTCCAGGACCACATTTACGAGgtcagtgtattgtattgtattgcT
AAATATTCTAAACATTGTATTGAAATTTATAACCCAAATTGTTATCAAAT
GCTCATtagtcttttcttttttaatcatatttGTCAACCTTGTATGTATT
CCGTGCAGCAAAGGAATtatagtggagtctctttaactcgaacctctata
actcgaatgtctcatTGACTCGAACAGGTTTTATTGTCCCTTCAGCTAAC
AACCTTATATCGCATGTAGCAAAGGCTTTATTAGCGATTTTGATGTATTC
GAGATGAATCGAAGGAGACAGTATAAAAAGTGAACATGTCTTCaaaatcg
ccgtccactttgctcgtcGACGGTAAAAAACACCAATAttccgtcgtctg
tttaggtgaacAAAGACAAGAGCCCTACAACAACTACTGACTTTGTTTTT
CATCGACTTTACTTACTGTCGCCTTCAATATCCTCTGATACACAAAACTC
GCTATGACTCGTTTATGACAAATGCCAGAGAATATCCGGTAAATTTCTCA
TATCCGATTTTTTGCTTTCTAGACAATGTCTACTTGTGCCCGAGTGATCG
TTCTGTTAAGTCCAAACTTTATGGACGACGTGGCGTGTATTGAGAAATAC
AACATTGGTATGTGTTATGCACGGAACACACGACGCAATTACTTAGCCCC
CATTTACATAGAGGAAATATCAAACATGCCAACTTACATGGGGCTGATTC
AATACATAGACGCAAGGTAAAAAGTattgtcaaatgtttttcacGATGCT
ACTAACAGTGAGCTTTACTACTGatctttatataccctggataaaacttt
ctcaatcccggccaagcaagatatttgatcggagtttttctGAAAAGTGG
TAcctaccctaatggtagcactaatCAATAGCgttgtaaatgcatcgaga
gtgctagatctacttttcctggAATACTTTGGATGATGTAGTGCCGTTAA
ACTTTAATTTTCAGCATTACAATGCCTTCTTTCCGGGCaccacttaaaaa
aaaactccgatcaaagatggcggatatacaaggtgcaccaaaaaaaagta
tataggtttgtcaagatattgtgaTCTTCAggattatattttttgttcat
tctttttttattgtatagaggatgctctaacttgaattttgagctattat
acattaaatttgaaaaagtagttcgaaagttatttccaaaaaactgactt
ttcttccatgtcgaaatttcaaaaaatcattaaaaacagcaatgggcttt
tccagaaatagtccgtgtccaccatgttgaggatatcggatatccagggg
gttaacgatttttgttcaaaattggatatccagggggttagatatctaca
agggagcggatatctaGAAGGttaagtgtcttttcaagtaaaaaatacga
tatccagggggtaagcatcttttTAAGAGAGAATATCCAGGAGGTTGAGC
Atattttaagagtggatatccaggggtctttactaataaagtaggatatc
caagCAGTTCGATACCTCGAAAATTAAATATCCTCAACAAGtgggggtaa
attttttttctgaaaaagcccaaTCACGCTAtgaataagacaaaatgaca
aaaacacaattccattgtctttttgattcttttttctcctatcttatatt
ttgccaacggtTTGTCTATCTTATTTACACGTCATGAATATTTCCAACAt
cagcaaactcaatgcagacccaagttctttgagcaactagttgaggaatg
gtgatttattttttcaaaaattttctcgcgTAGCACACCACACCGAGAgg
tggagatttccaaaaaagattttcagctttaccaaaaatatttttccaca
tgggaatagcttgttttaccatattcttaaattccataacgagttttgat
gaacacagttNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcattttttggt
atttttatgtgtaaagaaggtaagtgccaagagaaaagtttgctcgctgt
ttttgatgattttttgaaatttcgacattaaaaataagtcagtttttttg
aaataatcttcgaattactttttcaaacctaatgtatgatagctcaaaat
gcaagttagagcatcctctatgcgataaaaaaagaatgaacaaaaagttt
aaatcctgaagctcacaatatcacgacaaagttgtatacttctttttggt
gcacccggtagctTTTTCCAGTGTTAGTGGACAGTTTTTAGTATTAAACC
CGATACTTTCCCCacggaaaattattttgaaatagttGTGAACAAATCAT
CTAACTCTCTAAAAAAAATTCGTGTTCtctgaaacttttgaaaactttaa
aatatatCATATTAACTTCGTAATGTTGAAACAATGTCATGTGCCAGCCC
GAATTAGATGGTtcgtatttcaaaaaattttgatgttattttctttAGGC
CTGTTTCTGAAGCATCTATCCAAAACGTTTTAAGCACACTCTGTGTTGAC
CAGAAACCTACCAAAGATGTAAAAACCACACAACAACAAGAACACTCACC
AAAACAAATCTCCTTAGAAAACGCTTACGATCTCTTCATCTCATATTCAC
ATCAAAATTATGACGTAGCATTGAAAGTGTATCACGTGATCAAAGAGCAG
AAACCTCATTGGAGGATATTCTTTGATCAAGATGAACTAAAAGCTGGTCA
TTCTTGGCAATCCAAATTATATCATAGTATTGgtaaagacagtatttctt
ttcTGAAAATAATTTCCAGAACTAGTAAAGGGGACGAGGTCCGAGGTCCT
AACAGGGTCCTGGGTCctaattcttgatattcatgatgtaatctttacgC
ATAAACAATAAATGTGGCGTAAAAAACTTGGTGGCCATTATTGGTTGTAG
AAGATCGAACCCGCTGGcctattttttaattcaaagtGATGCAAACTAAA
GTATAAAAACTTATTGCAAAGTACCTacgaaataaaagtttttgaaattc
aaataactaaaggatttgaaaaaaaaattatttggctgATCTGTGTAAGT
CTTTCGATATTTTTCCGGAGTCCACGCCTGGGAAACATTGCAGAGCACTA
ATTCTATGCCACCTATAATGGCGGCCTAATATTTTGAAGCGGTGTGTCAa
tcaacaaaaatattaaatCGTGAATATCAAGAATGGGGTCTGGGTATAGG
GTATTCCATAAAAGTAAACGATTTTATTGTAATCATATTTCTAGTTTTGG
AAGATGGTATACTAAGTGTTGCCTAAGCACATGCCAAGTTTCGGTTCatg
aaatttcaatttacaatTCTTTCCAACAATCTTAGATTAAGTATATTTGA
GTCTCTTCGGCTAAAGGATTCTCACTAGTCCAATAGGACGGATATGATTA
TTTGAGTGAGAATATTCTAGAAAGAATGATTGAGATTTATTTCTTAAGAA
TTATATTGACTAATCAAAATCACTTTTNATGGCGTAAAAAACTTGGTGGC
CATTATTGGTTGTAGCAGATCGAACCCGCTGGCctattttttaattctta
aGTGATGCAAAGTAAAGTATAAAAACTTATTGCAAAGTACCTacgaaata
aaagtttttgaaattcaaataactaaaaggatttgaaaaaaaaaattatt
tggctgATCTGTGTAAGTCTTTCGATATTTTTCCGGAGTCCACGCCTGGG
AAACATTGCAGAGCACTAATTCTATGCCACCTATATTATGGCGGCCTAAT
ATTTTGAAGCGGTGTGTCAatcaacaaaaatattaaatCGAATCGAATAT
CAAGAATGGGGTCTGGGTATAGGATATTCCATAAAAGTAAACGATTTTAT
TGTATTCATATTTCTAGTTTTGGAAGATGGTATACTAAGTGTTGCCTAAG
CACATGCCAAGTTTCGGTTCatgaaatttcaatttacaatTCTTTCCAAC
AATCTTAGATTAAGTATATTTGAGTCTCTTCGGCTAAAGGATTCTCACTA
GTCCAATAGGNCAACAATCTTAGATTAATCATATTTGAGTTTCTTCGGCT
AAAGGATTCTCACTAGTCCAATAGGACGGATATGATTATTTGAGTGAGAA
TATTCTAGAAAGAATGATTGAGATTTATTTCTTAagaattatattgactt
atcaaaatcacttttgttttgttttagagAGCTCAAGGATTGTGATAGCA
TTGATCTCAAAAACCTATCTGCAATCCAAAGTTTGTCAAGAAGAATTCAA
CCTTGCTCAAAGCCTTTCGATGGATCATACTCTACCTCACAGTCTACGAT
TATTTAGAGTTCGGTTAGAAGATTTTCAAGAATTGCCACTTTGGTGTGGA
AGCAAGAAAAACATGTTCGATTTTACGGCCAAGGATCCGGCGAACTTAAG
TAAATTTGTGATGTATATGGATCATGAGTTCGACAACTGTAAGTATCTTA
CATGCCAAGGGGAGGTCACTTGGGTACGGGGACGCGCCGCGGGCCAGAGT
CCCTTTTTTTAAGCTCTGAAgatttctgacagggtcccaaatttaataat
tttcaaaatgtttatccGTCAAGGTTGACTTTTGGAATtggtttattcga
acccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCTACC
TCACAGTCTACGATTATTTAGAGTTCTGTTAGAAGATTTTCAAGAATTGC
CACTTTGGTGTGGAAGCAAGAAAAACATGTTCGATTTTACGGCCAAGGAT
CCGGCGAACTTAAGTAAATTTGTGATGTATATGGATCATGAGTTCGACAA
CTGTAAGTATCTTACATGCCCAGGGGAGGTCGCTTGGGTACGGGGACGCG
CCGCGGGCCAGAGTCCCTTTTTTTAAGCTCTGAAgatttctgacagggtc
cctgatttaataattttgaaaatgtttatccGCCACGGTTGACTTTTGGA
ATTGGTGTTTTTAGACAATGTTTAGGGTGGGAGTTAGGGAACAATTCTAG
TCGAGAAGTTGCTAGTTGCTACTTTCGAGTTGGGAAGTTGCTAGTTTCAG
TTgggaagttgaaaaattaccggctaccgaaaaagaataaacatacatca
aaagtacgactctgaaagtaaatgtaatatgaagagtaatatataacaca
taATAATACGTAttattaaagtctgttcacgataagtgtgcactcttttt
ggacctaccccggtggaggtcctataaattaacctttgtccgttcgtctg
ttcgtctgttcgtccgttcgttattagctttcctcatgattggctcgtta
attttttctgatcttttgcatgaaagtagggtaccatcgtaggtaaaaga
tggcttaagcagatttttgcaaaaaaattttgttggctcaaaaaacgcat
gtttatctatNggagcccgattttcgaagaaaaaaatttgggggggacaa
atttgggccaaaaaacggctaaaaattgggttttttggactttgtgaaaa
attggatcattaattttttcttatttttttacgggaaagtagggtaccat
cataggtaaaagatggttcaagcagattttttcaaaaatattttgttggc
tcaaaaaacgcatgtttatctataagaatcactattgataagcatacatc
aatgttcttagtcaaattactcaattttttttatgagatagatgtttttt
ttgctcatgagggcttacttataaagaatatgtgtgtttagacatgaaat
tttggttgcttggcttgtttttatagaaaaaggctcttttattctttatg
attttttgcacaaagatgcataactataaaccctcgaatgtgacggagct
cgatttttggaaaaaaaactttggggtaaatttcagccaaaaacggctaa
aaaaagggttttttggacttgtttttttctgactttttgcgtgaaagtag
gtaaaagatggctcaagcagatttttgtaaaaaaataatttttcagctca
aaaaacgcatatttatctataagaatcactattaataNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNctttttttataagaaacaaacgactaattttaatagatcgtta
ctatttgtgttctgaatgattgtttaatggtcacgcttatgtagatatca
attatatatgtgttaaatgcataaccaggtaggtccataaNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNttgaaggaattcttcaatcttta
taaatttggtatcgttggagagatatttgtgagtggaacaatttgaaata
aaaaagtctttaaaaatattctaaaaacgaagatgaaaattaagaagaaa
aaaaatgaagatcttgtagaaaagtgctataactttcattttcactggag
agattctttgatcttaggaggttatcactgtgaagaaatttcactaaaat
atttattcaatataaagttatgatttaatttaatttaatttaattttaat
ttacagtaatatatttctcaggtctatcgacctctatgaaataatcatgc
ttaacattttacaattttacagttgTAGGCGCACGGTGGGCCTCTNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTATTTTATT
TCAGATTTATACCTGAGTGAACGtgacattttgaccatcgatAATGTTAC
TTCTAAATTCCGAAGTGAGTTTGCTCGTAGTAAATATCCCATAATACCGG
ATGTAGACTTTACTCAAGAATGTGGTATGCAGGAAAATTTAAATTCATCT
CAAAGTGGGTACGATGTCATTCTCATAAGCCATCAAGATCATATAACGAT
TGTCCAATCATTAAAAGAAAGGTTACTTTGTAAAGCGCCGTCTCTCAAAA
TATTGCTGGTAACTAACAAGGACGAAAAGACGATTCGTTTAAATGTGTTT
GATGAAACTCGCCTGGTTATGTCGTTTCTTGGCAAGTCCTTCTTTGAGGA
TGTTTTCCTCATGGAGCAATTCAATACTGCTTTGTACAGACATCGATTCA
AAGAATATATCATTGCCTGCCCTGTGATTCTCGGTGAATTGCCTGCAATG
CCGGTATATCCGAAACTATCATTCTGCTTGTTTTCACTAACCGATAAACA
ATGGCATAATAAAGATGGTAAAGTTTCTGTTGAGCGCTTTGTTGATAATG
TAGCGTCTGTGGTTAGtaatattctatttttaaaaccCACCACAGCTACA
TCctttaaaacattatttaatATATTGGAGCTTCGAGAATGGGGCGATGA
GACTTATGGTGATAGAAAGAAACTCAAACCGCTAGCTTTTGATGGTGCAA
TGGTTGTATCCGCAAATGACCGTTCAATTATTTCTGTAAGAGATTCAATG
TTGATGGTTAGTGGTAGTCACGCTCTATCATCGCCAGAACCTATATTAGA
AATCACATCATCTGGGTTAGAATATTCAATACCTGAGCCAAAAGAACCAG
AAGAGAAATCACCAAATTTGCAACAACAAGCCGAAAAAACAGAAACAACC
TCAACAGATTATGTTGAACAGAAGCCTTCAGACTCACCAAGATCTCTCTT
GCTAATAAAGAAGGAAACAACATTTAAGAATGGCCAAGCTCCGCCGAGAA
GTGAGGTGGCAACAATCTCAACAGAATACGATAGACAAAAGGTTTTAGAT
TCCAATGAATCTTGTTCATTGCCGATAACGAAAACACCGCCACCGAAAAG
GGAGGCTGAAGAACCAGAGTTATTAGAACAGGCACCACCAACAGATGTTA
ACTCTGGTGAGATTCCTTCATCAGAACTAAATCAAACAAATGAAGCAGAT
CCTCCGAATAATAAGGCGAATGATAGTCGACTGAAACTCAAACGACAGAA
CAGCAAAACGTGTTGTATTCACTGAGGATTATTACTTCATTTCTACTGTA
ATATAGGTCACTGTTTTAATACTGTGTAGTTTCGCTCTGACATGGCTCTG
ACATAATTTGCAAACTATTGAAATTGCTTTGTTTTAGTAAtacttaaggc
ttggggacacgagaagttttttttcgcgttggtgcaatgcaacatgcccc
atcccaccaacctgaaacgctttttCGTGGCTCCaacccatttttctttt
aataacatttgtgcttcCCTCATGACAAAATCAGcttgtcttttgggtat
ttccctcattTCTTGTCTcattaaacaaaaaaagaaaccatggg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033205XLOC_033205Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052512-exon-scaffold_217-1491911889:58945..59482TCONS_00052512-exon-scaffold_217-1491911889:58945..59482Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:58945..59482TCONS_00052512-exon-scaffold_217-1510915933:58945..59482Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:58945..59482TCONS_00052512-exon-scaffold_217-1575043694:58945..59482Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:59941..60114TCONS_00052512-exon-scaffold_217-1491911889:59941..60114Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:59941..60114TCONS_00052512-exon-scaffold_217-1510915933:59941..60114Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:59941..60114TCONS_00052512-exon-scaffold_217-1575043694:59941..60114Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:60598..60719TCONS_00052512-exon-scaffold_217-1491911889:60598..60719Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:60598..60719TCONS_00052512-exon-scaffold_217-1510915933:60598..60719Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:60598..60719TCONS_00052512-exon-scaffold_217-1575043694:60598..60719Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:61220..61414TCONS_00052512-exon-scaffold_217-1491911889:61220..61414Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:61220..61414TCONS_00052512-exon-scaffold_217-1510915933:61220..61414Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:61220..61414TCONS_00052512-exon-scaffold_217-1575043694:61220..61414Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:62056..62220TCONS_00052512-exon-scaffold_217-1491911889:62056..62220Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:62056..62220TCONS_00052512-exon-scaffold_217-1510915933:62056..62220Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:62056..62220TCONS_00052512-exon-scaffold_217-1575043694:62056..62220Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:62767..62960TCONS_00052512-exon-scaffold_217-1491911889:62767..62960Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:62767..62960TCONS_00052512-exon-scaffold_217-1510915933:62767..62960Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:62767..62960TCONS_00052512-exon-scaffold_217-1575043694:62767..62960Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:64693..64976TCONS_00052512-exon-scaffold_217-1491911889:64693..64976Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:64693..64976TCONS_00052512-exon-scaffold_217-1510915933:64693..64976Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:64693..64976TCONS_00052512-exon-scaffold_217-1575043694:64693..64976Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:66422..66682TCONS_00052512-exon-scaffold_217-1491911889:66422..66682Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:66422..66682TCONS_00052512-exon-scaffold_217-1510915933:66422..66682Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:66422..66682TCONS_00052512-exon-scaffold_217-1575043694:66422..66682Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1491911889:71349..72938TCONS_00052512-exon-scaffold_217-1491911889:71349..72938Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1510915933:71349..72938TCONS_00052512-exon-scaffold_217-1510915933:71349..72938Clytia hemisphaericaexon
TCONS_00052512-exon-scaffold_217-1575043694:71349..72938TCONS_00052512-exon-scaffold_217-1575043694:71349..72938Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_217supercontigscaffold_217:58945..72938 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.40956e-07	0.768943	1.93231	1.01541	1.3325	3.22375e-06	3.30242	0	2.60157e-10	1.08219	1.46735e-05	0.546429	0.818351	0	2.09425e-09	0.250777	1.28971	0.585742	0	5.922e-05	7.50693e-10	0	0.892261	0.000636401	0	3.01053e-06	0	0.000280028	1.78158	0.937416
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052512 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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