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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052473 ID=TCONS_00052473|Name=TCONS_00052473|organism=Clytia hemisphaerica|type=transcript|length=1590bp agtgaaaaaaaaaacttacccaaccacatttttcaaaatgtatgatgaag atgaagaccCGAATTCAGTTCCCTTACCTTACGAATTACCAACTTCTTAC AAATGGCATCAACATGCGACATTTTATCATCCAATGATGGCTGGTTCTAT CGATGGTACAGATGTTGTGCCGCACGACCGCGCTATCGTACGCGCCACGA GAGCGAAGTATAAACCTAACAAACAGGTTAAAGGTGATCCCGAAAAAACG CTCATGGTTCGTCATTTACCAAACCAAACCAAAGAAATCAGTTTACGCAA CGTTTTCTCACGATACGGGGACCTACAAAATTGCCGGTTAGTCCGTGACG CCATCAGCGGGAAGAGCCGTGGTTACGCTTTCGTGGAATACAAGTGTGTG CGTGATTGTGAGGAGGCGCTTCGTGATTCAGGTGATTTAGTTATTGATGG ACAAAAAGTAGTCGTGGATAGGGAATGTGAACGCACACTAAAAGGTTGGA TACCGAGGCGGTTTGGGGGTGGGTTTGGCGGTAAGAAAGAATCAGGACAG CTCAGATTTGGTGGCATAGAAAGGCCTTTCCGTCGCCCGATTCCTGTCAA TTCAAAACCCTTAGGAAGACAACACTCGTCAACTGAGAGTCGTGACGGAA AAAGGCGTTTCCCATCAACGAGCGACGCACCACGCTACAAACGAACGCCT CACGACGACGATAAACGCTCACGAATGAGGTAGTCATGGTAACGAAATGC GCCATCATTAAGAAGAAATCTAAGAATCATGGGGCTTTTTGAATTTGTGG TCGAGTCAAACCATGCATCGATATAAAAGACACCCTGACGTTGATGAACA ATGAAAAAGTAACTGAATAGACTTATACTATACATTTTCCGAGAACTGTG TGTTTTAATGTGCTCGCGACATTAAAATCCAAGAAATTCTGTCGAGGTtg aatttccaaataaaatgcTAATCGGTGCCTTGTCTTAACACATTTAATGA AGTCTTTATCCAGGAAAGTTTTGGTTGGTTACGAAAACATTAATGCATTT TCTAATGGTATGAAATTCACCATGACGTATTATTGTTTGGCTTGACTTGA TTATTATTTGGAAAAAGACATTCTTCCACGGACTTCTTTTCTTAACGAAC CTCGTGACATTCCTATTCAGGAAGCGTGGTCAATTTTATTGGCATTGGAT TGTTTCATGACACATTTAACCTAAGTCCTTATTCACCTTCATTCTTTATC ACGAACCTATCTGAACTCATGTTGTGCAAATCTAGCACGTATCCTGGAAA TGAGCTAATGGTTCACGCATTAACTTTACCTTGATGACTAATGTAATTAT TATACTgtaattgtttttgaatgaTGCAACCAATCATAACCGGGGGTAAT GGAATTGGTTGGGTTGATACAATTTAAAGCCTACATTATGACGTCTATCC GTGAGAAATTGTATGAATTTGTaacagtttttttaaagaaaagaaatatc cattttagattttcaaccatATTAAGTTATATATGTCATTGTCAATCTTG ATCTCTTTTTGACAGCGTTTCTATAACAGGAATACATAGT Run BLAST on NCBI transcript from alignment at scaffold_214:311352..330474- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052473 ID=TCONS_00052473|Name=TCONS_00052473|organism=Clytia hemisphaerica|type=transcript|length=19123bp|location=Sequence derived from alignment at scaffold_214:311352..330474- (Clytia hemisphaerica) AGTGAAAAAAAAAACTTACCCAACCACATTTTTCAAAATGTATGATGAAG
ATGAAGACCCGAATTCAGTTCCCTTACCTTACGAATTACCAACTTCTTAC
AAATGGCATCAACATGCGACATTTTATCATCCAATGATGGCTGGTTCTAT
CGATGGTACAGATGTTGTGCCGCACGACCGCGCTATCGTACGCGCCACGA
GAGCGAAGTATAAACCTAACAAACAGGTGATTATTGATTTCAGATAACCT
TACATTAGCCTTAGCTTTTATTGTAGGAAAATTTTTATTGGGAGGAATAA
GAAGAGTGAAAATTTCAGCTTTGAGAACCTTTACGAGTGGATTCGTGGTC
AAGGTAAAATGTTTACCATATCCATGTCTTTGTTTGAAAGCTCGGTTCTT
TAGCTAAAAAATGTGCCGAAACTTTTGTTGAAATGGACATTTTTAGACAG
GGGACATACAGTTGCACTTTCACTCAATGTTTAATAGCTTCCCAATCGAT
AACATTTTTGATCACCACAATATGCTAAATACTATAAACTGATTGGGTAG
TTTTTTTTTGCCGTTTAGGGATTTATTTTTTTTCTAAAATTTTCTGGAAA
GAATTGAGAAAGGGATCTCTCGAAGGTGATGATATAACCTGGTTATTAAG
CCAAAATTCCTTAAACTGCGTTGCCTTTTTCCAAAAATCTAAAGCGAGTT
AACGGTTAAAAAGGCTTATTTTGTGACGGAAGGAACACTTCTTTCCCTCA
ATTCTTGTCTATTCTCGATTTCGAGTTTTGAATCACTTGAGGATAAAGAA
GTACTCTTTTGAGTAATCTCGACTCTCGCAGGAAGCCAGCATTTGCTTTT
GTAAAGTTACTGAGTAACAATATTTCCAAAAAGATAAATTTGTAGCGGCG
CCTCATTAACTTGCATCGCATGGTAACGCATTTGAAAGTCATTAAAGAAG
ATCTAAATAAGAAAATAATTATGCTGAATAAGAACTGACACGGAATCAGT
GAGACACTTTATTTGATAATTACTCTCTTTTGTTTTGATGTTTATTTTTG
GTATATTCCGGAAATGGAAATGAGTATGTGAAAAAGGGGAAATCACTTTT
GGTTCTAATTGCTTTCCTGTTTCTTTTTAAGGCTGTCTACTATGTATAAA
CCATATACATTTTCCTTTTCCTGTCTATGAACCTCTCCTTTCAATTCGTC
GAGTTCGATGACTTAGCTCATTTTCCACGTTCATCTAATGTCATATGGAC
TAAATACATTCATTCTGCACATACTACTCTTTGCTCTAAAGGGGGATGAC
GAATGTGACGATGTGACCCGATTGTTCAGCCAAAACGTTTAAAACTGGGC
TTTTGCTTTAGCCAATCATAGAGGTAATAAAAGTTAGATGGAGTAACAAC
TTTTCTGTAATAGCCAGAGAAGTCATAAAACTCTTTAGAAATTTCTTTCA
AATCGGCCTCCTTGCTTTGATTACCAATCCTTGATAGAAAAAATCAGTCA
AGGTATATAGATTATAAGAACTAAAGTAAAGTTATTCTGTCCAACGAAAC
CTTGTATTTTTAGGTAAAATACGAATTTTTTTCGAGCAATAATTTCTTTA
TAGTTTTAAAAGAAGTTTTTATTTTATCGGGAAACTTTCGAGAGGTAAAC
AAATTTTGCGAATTCTTTGTTGTTTGTGGAAGGTTCTTTGCTATAAATAT
CTTTAGATCTAAAATAGCAGCTGCCTCAAAATTTTGATAGAATATAGTTG
AAATATTGGCATTAGTAAATATGTAAAAATTGACAAAATTTGCCGAGGAT
TCCCTGAGCAGCGAACATTTCAAATTCGATGTTCTGTGCTTATTCTTGCA
AGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGAACAAATTAAA
AATGTAGCGTGATTTTATTCAAATTCTCTTCGACTCAAGTATTCCCATGA
GCGAAAGCAAAATTAATGGCTTTTTCCCAAAGCAACAAAGAAACAGTTTG
CTATCAACGATACAATACAATAGAATAGTAGGAGTGGTATCTCCATCTAT
ATTTTTATTACCTCCATGAGCCAATCACCGCACTCTAAAGCTCATTTAAT
ATTCATCCGAAATCTGGATGAAAAAGATCAAAGTGGTTCAGATTTTCCAA
GCATCATGACGGTCAATGGCAACTTCTTCTAGTTGAGCCAGTGCAGAACC
AGTATCAACATTTATTTGGTCTTTCCATCTTTTTGAAGGTTTTCCACACG
CGATCTGGGGTTTTTGAAGTCGTCTTTTAAGACAATTTTGACGGGATTGT
CCAGGTCTCTGAGAATGACAGGGGAAAACCAGGAGAGACGTCTCTTCCTA
ACGATGTTACAAAAGTGGTGGTGACTCCAAGCCGGTTTCTGATTTCAATA
TTACGAACACGGTCCATTAATGTGAGGCCGAGAAGTGATCTGAAACATCT
AATTTCGAAAACTGTGTATCTGGATTTCCGTAGATTGGACGATGACGATT
CGTCGAGCATTCGATTCTTCTCCACTACAACAAGTGAACGGTTAGTTTTT
ATATAGGGCGCCGATTACTCGCCCTGTCGTAAGAGCCGCATTATCCAGTG
AACACCGACGAGGAGGGAGAGGGTTGACTTCTGAGCTGAGAGGCTTTTTG
AGACGCTGCACATCTATGTACTTTTGTACATGTCTATTCACTCATCTTGA
ACACCCATTTATACTATACAAAAATTCTTAATGACTCTCTTTCACCTATT
CGTACTACTATCCAAAACTGCTTTAACTATTCTACTACTCAAACTTTGTT
TTTCGAACAGAGTTGCTTCAGCTTCGGCACTAGCCAAGGTGGTTCAAAAA
ATCATTTCCAGTTTACAATATAAAGGATTTCATTAAGAATATGTAAATGT
GAAGAAATTTTTGAAAGTCTTCCTTGACGTTGATATCTTCCTTTGCAATT
AATCCTGNGACGGTCAATGGCAACTTCTCCTAGTTGAGCCAGTGCAGAAC
CAGTATCAACATTCATTTGGTCTTTCCATCTTTTTGGAGGTCTTTACGCG
GTCTGGGGTTTTTGAAGTCGTCTTTTAAGACAATTTTGACGGGATTGTCC
AGGTCTCTGAGAATGACAGGGGAAAACCAGGAGAGACGTCTCTTCCTAAC
GATGTTACAAAAGTGGTGGTGACTCCAAGCCGGTTTCTGATTTCAATATT
ACGAACACGGTCCATTAATGTGAGGCCGAGAAGTGATCTGAAACATCTAA
TTTCGAAAACTGTGTATCTGGATTTCCGTAGATTGGACGATGACGATTCG
TCGAGCATTCGATTCTTCTCCACTACAACAAGTGAACGGTTAGTTTTTAT
ATAGGGCGCCGATTACTCGCCCTGTCGTAAGAGCCGCATTATCCAGTGAA
CACCGACGAGGAGGGAGAGGGTTGACTTCTGAGCTGAGAGGCTTTTTGAG
ACGCTGCACATCTATGTACTTTTGTACATGTCTATTCACTCATCTTGAAC
ACCCATTTATACTATACAAAAATTCTTAATGACTCTCTTTCACCTATTCG
TACTACTATCCAAAACTGCTTTAACTATTCTACTACTCAAACTTTGTTTT
TCGAACAGAGTTGCTTCAGCTTCGGCACTAGCCAAGGTGGTTCAAAAAAT
CATTTCCAGTTTACAATATAAAGGATTTCATTAAGAATATGTAAATGTGA
AGAAATTTTTGAAAGTCTTCCTTGACGTTGATATCTTCCTTTGCAATTAA
TCCTGGTGAGCAAATCCGATTTAAAAAAAAGAGGAAATCATTGGCATTAA
CCAAACATGTCAATGTTGAACTGATTGTATTATTTAGCAATACAGGATGG
TCATTTTTTTCGCGTTTCATCAATTTCGCAATCGAGTCATTTTGTTTAAT
TCCTGATCTCCAGGTTGTTACTGTTAATTATGGTTCTTTTTTGAGTTCTG
CTAATTGGGAGGTACCTCGCTTACATGATCATTATTTCTTCATTCTTTGT
CGCCATGCAAATCAACATAATGATGTGTCAATTTTGTTAAATTTTGTAAC
AAGTTTACTTACTACTAGGGGGAAAAATTCAGGAAAATAATCAAAAATCA
CCATCAATAAACGACTTTTGCAGCCCGTCAAAGTGCATCATAAATAAAGA
AAACACACCAAAAGGTGCCCTACAATGCAGGAAGTGCCACCGTTTAGTCA
ATTATCTTTGTACAGAACTGCCACTTTACCAAATCCAGATATGCTTGTCA
TACAAATCAAGAAGTTTCCAGTGTCAAAACTGTACCAAAAAACGCACGCA
CCACAGGTAATGGAAAGGTAAAATTCAAATGAAAAATCAAAAATTGAAGG
ATTCAAAAACGAAATCAAAGCCTGTGAGAATATAATGAAAAGGCAGGACG
AAGAAATAAACCATTTGAAAGCACAAGAAGTCAATGTTATGGTCAATGAA
ATGAAAGAAACTATCGACACCAGAATAACCACGCTTGAAAAGAAGATTGA
AAACATCATCGAAAAGAAAGAAGAGGAAAGACCACCAATGTATGAGCTAC
GCTAAAATCACATCCAAACACATTGAGAAAAACATTGGAGATGCAATTCG
AAAAGAAAAGCAGGAGGAGCAGCTGATTCGATCGACAGCACGTAACCTAA
TTTTTCATGGGATTGATGAATCGACAGATGAATCTGAAGAAGAAACGAAA
ATCAAGGACGAATAATTTATCCATAACAAAATTATTGGTTGGCGGCTCCA
TCTGAGGAATATAAAGACTACCGAGACGCAGCGGATCGGGAAATCTATGA
AAGAAAGAGAAGATAAAGCGAGATACCGACCAATCAAAGTCACATTTACG
AACGAAGAGGGCAAGAACACAGTGTTGCAAGCAATAACAAAAGCAAAAGG
CTCTCCTTACCGAGTGACAGAGGATTTGACCAAAAATGAAAAGCAAATAA
TCAAAGAATGGTGTTAGGAAGCCGAAAAAATGAATGCTAAAATCAAAGGA
GACAACACAAAATGGAAAGTCTGGGGGAGCCCGCGAAAAATACTCTATTT
CAAAAAGATCACTGTAAAAAGTACGAGCAGTTTATAGAGGCCCATGTGTC
TTCATGGTGGCCTTCAAACCTGTAAAGCTTTTTATTATTATTATTTTTAT
TGCTAAGGTGAGACAAATTTAATTTGTTGTTCTACGGGCAGATCGTTAGC
AAAATATGAGTCGGTCGGTCGGTAAAATAAAAATAAGATTTTCATTGCAA
TCAAGGAAGGTAATTAGGCATTAAGTAATACTTTCAAATAATCTTAGTCG
AAAATTCATCATTCATCTTTGTAATAAAATCTTTTGTGCATATGTTGGAC
GGTGAAAAAGAATGCGGCTATTATATTTTGATTTTTCCCGACATGTTTCG
GACTCGGTCCGTTCTCAAGCAATCTTTTGTGCATAGAATTCATGATTCTA
GATTCTTTTCAACTTTTTTTAAGTGTAAAATTTTTTAATGACTAGTATTA
TAAATTTGGGAAATAGGAAATTCAATATTATTGTTTTTTCGTTTGCAGCA
AATGCTGGGTCGGTCGCGCCCATAGAACAACAAATTAAATTGGTCTCGCC
TAATTAAGCATTATTATTGATTCGTTTCTCAAGACGTTTTCCCGTAAATT
TGAAAATATTCAATTGCCCAATAACATTTTCTGTTTTTATTAATTTAGAT
ATTATTTAGTCTAATATCAGTCTTGTAACCAGGGTATTTATGAAATTCTA
AAGTTCTTGGACAAAAAATCTCATACATCGTGGTACATTTTTTCTCGGAT
AAGGTTAGAATAATATTTAGATCAGGTGAAAATATTTTTCTTCAATTTTG
ATAATATTCAAATATTCCATTTATTGTAACTTTTTACTGTAGTATAATCT
CTATGAGAAAAATGGCTTTAAATCCATGCTACCAAGATTAACAAATTAGC
TAAAATAGATTTACAATTGCATCAAAAGCAAAAATTTAGGCTGATAACCG
ACTCGTAATCACAATCCTATGTACGCTGGAATAAACAATCTAATGATTAA
TTCAATTCAGACGAGACTAAACTGACAAATTGTTTTGGACTTCTAAATAA
GTATTTATCAGGGTGTCTACGGGACCTTGAAAATGAACCACCCAACCTTG
AAAACCTTGAAAACTATCAATTTTCTGGGAAAAACCTTGAAAACCTTGAA
AAATCGTTAAAGACCTTGAAAAGCACTATCCAGTCATTCGAAAAGTAAGA
ATAAGTAAAAAACCCCCTGCGGCGCTTAACCTTTATAATATAACATTTAG
AGAATTCCATATTTTCCTGTTTCTGTTGCGATTCTGTCGCAACGAATGCA
ACATATTCTTTTATCATTAGCTGAGTTTTTGTCANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNCCTTGAAAAGTGCCAAAGTTTTTGCCAAAA
AACCTTGAAAAACCACTTAAAAATGACCAAAAAAACCTTGAAAATCCCGA
AAAAAAATCCGTAGACACCCTGTTTATGGTTTGAAAGTCTATATTGATGC
AAGCTCTATTTCGGTGTTTTTTATGTCGTCTTTATCCATTTTCCTTTTGT
ATTTTATTGGAAATTAATATTTTTTGCTGCCACATTAGGGCGCTTTACGG
TTCTGCTTGTATATGTAAATCGACCGACCTTCCTTTCTGAGTAACTTTGC
TACTTGTCATGCTTGGTGGATCTCTCGAACTTCACTACTTTTATACTTAC
CCCTATATCGTCTTATGCTCCACGAGAGTCACGATATTCTATCTATGAGT
TCATGTATTTGCTCACTCAAACTAAGTAGTGCACTTTACACTTTTTTCTT
TTTTAGACTTTAACTATAATACTTACGTTTTCGGCACCTCCAGTTTGAAA
TTTTTTCTTAATTTTATGGCAAAATTTGTAAATGCTTTGACCTTTAAATG
GCTTGAAATTGAAAGCATTGCTCTTAAATTGTTCTTATTTTTTGACGATT
TTGAGCCTCGATGTTCTGTGAAATTGTTCTTATGAATAAAAAATGTATGC
CTTCGGCAATACTTTTACTCGAATTTTCTTCCTGTAAATGTAATACCTTT
TAGCACGAAATATGTAATCTGCCACTATTTGTGTGACGCACGGATAAAAA
CTCCTTTTAACCAATTTCTTTTTTTCTTTATTACCATCCGTTAAATGAAG
AAAATTGCTCAATCACTTACTTTCATATCTTCTAAATATGGGAGATCTGC
TGATTGGGCTATTTTTGATTTTCCGTTCCAGCCTCCTTTTCCTTTCTCTC
CTCATATCTGTACCGGGATTTATTTTACCAGGTTAGCCAATCTGCCGAAT
CTTCTTCTATTCCATATTTGACCGGCTTGTATTTTAAATACTTTGGCCTG
GAAACGAGTTTGATCAAAATTTAAGATTTTTTCTTGTCATTGTCTCCTAG
TAAAACTAAATGCTGTCTGTAATCCTTGGCATTCTTTACATTTTTGAAGC
AACTGCTAAGGTTTAATAGAAAGTTATGTTTTCCTTATTTCATACATGAA
GACCAAGAATAACTATTTTTATTCCATTTAATCATATAGGAAAGGTCCCT
TTTTTAATTTTAGTCTTGTATAATACTTTACACTTTTAGGTTGGTTAGTT
TGATCTTGACAATAATTTAACATGATCCCATAAAAGGCCAATGTCGGCTG
TAAAAGACTTGGGTCAAACTTCTTATAAATGAAAAACTGACAATTAGGTT
CGCGATTGCAAAATGTCTTTCTGTTTGATTGACGTCTTTACGGTTTTTTT
ACTAATTTGGTTGAGGGGGTTGAGCGGAGACGGTTCTTTACAATTACTGT
ATCAAATCAATTAAGCGAAAAAATTCATTATTGTTTTGGATATTGCTTCA
TTTTGTTTCTCCTTTTTATCGTAATTACAGGGGTTTGATTGTTTGAAAGC
CAACACGTGGGTTTTGTACGGCTAGCCAATAAAATATGTGATGTGTCAAC
GTTTTATTTATGTCTATTTTTGAAGAGGGGAATTACTTGCTGAAAGGCTG
ATATGGAAGAATTTATCCAACCGGTAGATTCTAGCCGATATCCGATAGGT
TACAAACACGAAATACCTTCTGACCGAATTGTGAAATTGGTGTTACACAG
CTGATTCCTGTGCCAAGTTCATAACCGTTAGATATAATTTGCATAACCGA
TCAAGGCAAACTGCCAAAAGTTATTTTTGATATTGTATTGAAGTTGTCCG
TTTTACGTTAAGAAAAAGCTCTGAAGCTGAGTGAATGTCTACATAATATC
TAATTGTGCAACTCGGATCCTGAAATTTGCTGTAAGCTTCTTTCAATCGT
ATGTCTACGATATATTGCAAAGTTTATTTACGAACCATAACTTGTTTTGC
ACACCTGAACCTGTCACCTGCAAGCCAACCACTTTATTTCGTTTTTATCT
GAAAGCCACTTTTTGCTTCTATAAGCATAAAAACGTTTAATTAGCAAGAT
TCACCTTTAGCCTTCGGCTTGAAATTCAACTAGTCAAACTCTTTAAGGTG
ATCTGTCCGGGCTAATAGTACTATTTTCAAGTTTTTCATCCATTCAGGAT
GAATATTAAATGAGCTTTGGAGCAAAACAACCACACCTAGATACTTACTT
TCAGGTACCTAATAGCCGGGGGGTTTGGAATAAGCAAGGGGGTTGGAAAA
AATCTCAAAACTTAATAATCGGGGGGGGGGGGGGGAAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGACGGGACGGCTATTA
GGTACCCGAGAGTATTTGTACAACAAGTGAGAACCTAGTCGCTTTTGCTC
TCTTTCTCAGGAAAAGTTCAATCGGGCTTCAATTGAAGTCGGCTGAACTA
GCGTGTTGAATTATCGCGCTTGCCGCGGTCTTTAGAGTAGAGCGTGGCGC
TGGTTGAATCTGTTTGAATGGATGATCTATATAAACCTTAGTGTTTTGAT
GAGATTAGGTAAAGGGAATTAGGTTTGAGTAAGAGCTTTGAATATACAAG
GTAGACACCAGAAAATGAGATATGTGTCATTACATTGGAGAAAAAGTAAA
TACTTTAAACCTTCGAGCATCTACTTTAGGCGTACAAACTTTCGCGAGCA
GAAACTTTCGCGATTTTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATG
TCTTTAAAAATTCTAGGAAGGGCCATTCGCGAAAGTTTATGCCCGCGAAA
AATATTTTTTCGTTAAATTCGCGAAAGTAAATGTCTTTAAAAATTCTAGG
AAGGGCCATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTGATAAAATAG
AAAATCTGTAAAACTTCAAACTTTAAATAAAATGTAACTTTTCTGGCATT
TTTTAGCCTGCTAAAAGACTAATAAGTCAAAGGACAAATGTTTCAAGCCA
ATCCACGAAGTATTTGTCCCTATCTAAGCATTTTTTCATGTGAAAATTCT
CAATTTTGCGTCTTGATTCGCGAAAGTTTATGCCCGCGAAAAATATTTTT
TCGTTAAATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTCCT
CGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTAGTCAGGGCT
AGATTAAATATCAGACTTCGCTCGATTGCTCTGTTAAAAGAATTCTTGTT
ATTTGGTCTACTTGGGATTGAGAATAGCAGAAATCTTCTTATTCTTTACT
AAGAGCAGCATCTTTGGGGGGGGGGTCAGATTAACGAGTGCTATGAGTTT
GATATTTTGGCCAGTGGTAGTTATGGATAATTAGAGATAATTTGCTAAAT
TTGTTCGACCAGATTTGTATTTTGATTTTGTTGACCGGTTGGCTCGTTCG
ATTTGATTGAATTTTGGCTGGTTTATCAACTAAAAGAGACTAGTAACGAA
AAAAAAAATGGTCCCATGAGTACTTGGTACTTTGTAGACCGTTCTCTATA
AATATACATCGACCCTCTGACGGAACTCAGGAACTTCTGGAGCTGTTGAC
TTGAAATTTCCACTAGTGGTAAATATTGACTATGAAGGAAGAGTGCAAAA
CTTCAGTTTGGTCCACGTGTATGGTTGGTGATTACCGACAGGTCTTTTCT
TAATGCTTACTATCAGCAAAGCTTCTCGGCCCTTTTTACGCCGGCCCCTT
TTACACCGACCCGTATTACGCCACAGCCAAATTTTGGGCTTACGCCAATT
AGGACCGTTAATAACGCCAAAATTTGTAAAAGTGGCTACTTATGCTTCAA
ATTAGTAAATAATGACTAAAATTTACATCAAAATGTCATTTTCAGTAATA
AACTGTTGAAAATTCCATCGAAAATCACTGATTTTTTAATATATCAAATA
TTTCACTGAAGTTTTAAATATGGAGTAAAACGATGGATAATTTTCGTCTT
CGAATCATACCTAAAATCCTTTAAATTGAGAAATAATGATAGAAAATTAA
CGCCGCTTTTAGGTTGAAATTGCAAAACCTTTGCCCTTGTTACGTTTTTT
GGCTGCAAACTTACTACATCATCAATACCTAACACTTTTCAAAAGTGTAA
GTCATTTCAATCCGTAGATACAGTAACCTAGGCCTAATACGCCATAATGG
TAATTTTGGACCGGTCTGTAAAATGCACGATACCAACAGGTGTCAACAAG
TTGATTCCGTGCCCTAAAAATACATTTCACGAAAAGTTACCTTGCAAATT
TAAGCAAAAAATATTGAAGTGAAAATATTTAGTGGACACAATTTAGTTTC
AACAAAAACCACTGATTTTGTCCAAATATATTAACCCCCATTTTTAAACG
ACCCTCCACCTCTTACCCTTCCCCTTTTCACGAAGATTCCATGGCTTGGC
AGCAGCTTTTATGTGCCCCATAAGAATTTAGGTAATTGCTAAAATTAAAT
TGATACACGCCCATCTTTGACGGGCGTTATAACTTGGAGTTTCGTAGCTA
ACTTTGGAAAAGGGGTTTAGTTTTAGTCCTGCTTTTCGCTTTTTGAAAAT
TCTCTTTTGTTGCCAAGCTTTGAAACTGAAAGATTTAGGCTGTTGTTTTA
ACAATCTCCTTTTCGCCTGTTACTTCATACCATGTACGGCTTCATTGGTT
ATACTTTGAGCAATCATTTCCAATCTTTAAGCTAGCTTTTGGTTTGTTAA
CGTTTCGTGAAATGCAATTTTGTCATTGCCTTGAAATGTTTTTCACAATC
ATCTTTCTTCTTTTTTTCCCTTCACACCCACATTTCATTGTCTATGTCAG
ACTTTTCACATTTCCGAAATCTGTTGTTAAAAATAAATATTTGTGGTCAG
AAGAAAGCGCTAGATTTTGAGTTTTTTTCTCTTTATTCAAGAAAAAAGTT
GATCTCCTTGGCCTCGCATGTTTTTATCATAGCATCCCTTCTAGATAAAA
AGTTAAGGTCTCTACTGAAGGCGACGTGTAAGGCTTAAAAACTCAAAAGA
AAAGCTAAGCATTTTAGAGGATGTCCCTTCCAATAAAAACCTTTGACAAA
TTTATTCAGCCCTAGGATGCTTCAATTAAAAGCACTCCATACTAAACACC
AAGGTTGAAAAAAATACAATAGCTATTTAATGTACTCTTTCAAATTTTAA
AGGTACATACCGTAAGAATAGACCTTTTCATGAATTACGTCACGAACATC
ACTTGCCTCGAATTCAAACAATTACCATGGTGATTATGTCCCTTGACACA
TTAAATGATTTTTTTATGAATAGATAGTAGTTTTTATAAAATCCGCTGGA
AGTTAATCACCATGGCAATAATTTCAAAACGAGGCAAGGGATGTTCGTGA
CGTAATTTATGAAAAGGTCTATTAAAATGTCAGTTATTGATTTTCTTTGA
AACTAAATTTCCTTTAATACGTTCACTGCCAGCCCCTTTTCAGGAGTTAA
GCCCTTGGAATGTTATCGACGGTTTGTCTTTCCCAATTGTGACGGAAGTT
ATGACCGTTAGAAGTACTTGTTGTCAGCTGTGAAAAAGTTGCATTTTGTC
CTGTCAAAGCCATCAGTTTTAATTAATATTTTCAAACTAAACCTTGAGGA
TGGGTTTGATCTTATGAAAAAATGTCAGTCTCAGTGTTATTTTCCATAAA
CTTTCAAAACGCTGGGCCTGACCTTTCTGTTTCGCTGTTNAGGCAAGGGA
TGTTCGTGACGTAATTTATGAAAAGGTCTATTAAAATGTCAGTTATTGAT
TTTCTTTGAAACTAAATTTCCTTTAATACATTCACTGCCAGCCCCTTTTC
AGGAGTTAAGCCCAATGAAGTATAAGCCCGAAGGGCTAGAAGTCAATCTC
TTTGGTAGGATTTGAAGCCAACAAATCCTACCAAAGTTGCGCGGCCTTGA
GCGACCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
GCCCTTCGGGCTTGAAACTCAATGGTTAAGCCCTTGGAATGTTATCGACG
GTTTGTCTTTCCCAATTGTGATGGAAGTTATGGCCGTTAGAAGTACTTGT
TGTCAGCTGTGAAAAAGTTGCATTTTGTCCTGTCAAAGCCATCAGTTTTA
ATTAATATTTTCAAACTAAACCTTGAGGATGGGTTTGATCTTATGAAAAA
ATGTCAGTCTCAGTGTTATTTTCCATAAACTTTCAAAACGCTGGGCCTGA
CCTTTCTGTTTCGCTGTTTTTTGAATGTCACTTGGCCCTGTACGCCCTTT
CGTACTTGTATACGTACCTTATTTAAAGGTTTTCTTTTCAAATACAAGTG
GTATCGTTTGCTTACTCATCAATTTTAGTTTACAAGCTTTTCCACATTGA
TATGACACGGATGTGGAACAAGATTGGTCAGAATGGGTAAAAGAAAAAAC
AATGCTTTGTTTATTCAGCACGAAATCGAACGCAATATAACAATAGGACA
GAGACACTGGCCTGATATGAAACGGGAACAGTTATGTAAAACTAAAACCT
TTAAAAAGGTACCTCTTGCTCGTCACATTTAAAAGCGTCAAAACTANCTC
GAATCGGTCCCCCCGGACAAATCATGAATTTTATTTTCAATACTTTTTAA
TGGTAATGATTTCATCATTGTTTTTATTACCTAGTTTTATTGCACCAATT
ATCCAGTTTTTTAACTGTTTACGTCGAATTTCAATTTTTTTCAATCATTT
TGTACATATGACTAGTGTGAAAACACGAAACTCAGAGTAATGTACTTTAC
TTAGTTTTTTTTAAATGGAAGACAACTTTTAAAAATATTAATGCTAATTC
TCTTGAGAAATGGTCCAAAATGTTGAAAGGTTGCGGTTGCTTTTACATAT
TGCGTACTTTCTTTCCGTTCATCAAAAAAGGCTTTAAAATGTAGAGTATA
TTCAACCTTCTGTTAAAAAGAAAATCTTCAAAATTTCTTCCTCTATGTGA
AATCAAGTGCGTATTACTTGTAGGTGACGAATCGACGGATCCTGCACTAA
TGCACTTCTCAGTTTTCTCAAAGGTAACGAATCGAGAGTCTTCCTACATG
TAATGGTTAAGATTGTTTCCTTAGTTACCGCCTCAAATTTTAAGTTGCGT
AAATCCTGCATAGATTTAGATTTTTTAAATATATTTTGAATACATTTGAC
CTTGAAATTTTTTTTTTTATGAGTTCGTGAAAATTATCGTTAGAACACCT
AATAGTACAATCAGTGCCATAATATATTGGCACTTTTGGCTAATTTACCA
TTTTTTGAAAATTGAAGTTCGAGCGAGAATGTCAATTTTTAGGCCTTCAA
CTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTAAGTCTTAAGTC
TAGCGTTAAAACTCAGAATTAAAACTCTACCCTTCGAACCTACTTTAGAG
CACTTACAAATCGATTGTGGTTTCAAAACACCCCGGTGAAGTTCCCTTTA
GTGCCAAGCATTTTGTGACTGATTGTAGGGACAAACCCTTAGGACCCGCG
AGTTTTTCCCGAAGGGGGGGGGCTTCCGCAAAGGCCCAGGAAATTTTTTA
GTACTCAAAAACTGTCGTCACAGGCAAAGCCCCTTGGCCCCAAAAATTTG
ACCAAATTTCAAAGTCAATAAAACCATATGTAATATGCTATACTTATGCA
ATACTTATACCAATCGAAAGCACTCGAAAAACGATATAGAGGACTTTTAC
AGTCGATTTTTCAACCTATCTCGAGAAAATTAACGTCAAAGTTGCGTTTT
GACGTCATTTCTAGTCGATTTTCCCGAGTCGACTATATCTTATATCTCAA
AAAGCTAATTAAAATTCAGAAACAACGCATATCAAGCTAAAGGTAAAAAC
ATTCAAACCGAAGAGCTAAGGGATCGCCCCTACTATAACAACAATGTGAC
CCTACTTTAGCGACAAAGTACTAACTAACACCATCATGTATTTCTTTAAC
CTGTTTAGAATGGTAATAAGAATTCATGTTCTCTAAGTACAAATCACGAT
CGACTAACATCAATTCAATCAGATTGTTTAACGAATCTTATTAATCTGGG
GAAAGTTTTCGATGTGTTTTACGGTCACTTGTTTGACCACATCCATATGC
AATACATGGATTTATAGTGATTAATTTGTTTCATCAACCTAGTCCAAAAT
TCTCATAGTTTCAAAATTTAAATTGAAAATTTTGAGGTTTCTTATGCTAA
ATTTCGGGGAGAAGAACTATTAGACGAGCTGTTAAAAAAGAGACTACTCC
GAAAACAAAAAGACAAAAACTAACACCGTACTTGTTTTGTCATTTACTCC
CAATGTATGAAGCGTTTAGAATCAAGTCAAAATATTATCTTATTATTTTT
ATGTTCAGGTTAAAGGTGATCCCGAAAAAACGCTCATGGTTCGTCATTTA
CCAAACCAAACCAAAGAAATCAGTTTACGCAACGTTTTCTCACGATACGG
GGACCTACAAAATTGCCGGTTAGTCCGTGACGCCATCAGCGGGAAGAGCC
GTGGTTACGCTTTCGTGGAATACAAGTGTGTGCGTGATTGTGAGGAGGCG
CTTCGTGATTCAGGTGATTTAGTTATTGATGGACAAAAAGTAGTCGTGGA
TAGGGAATGTGAACGCACACTAAAAGGTTGGATACCGAGGCGGTTTGGGG
GTGGGTTTGGCGGTAAGAAAGAATCAGGACAGCTCAGATTTGGTGGCATA
GAAAGGCCTTTCCGTCGCCCGATTCCTGTCAATTCAAAACCCTTAGGAAG
ACAACACTCGTCAACTGAGAGTCGTGACGGAAAAAGGCGTTTCCCATCAA
CGAGCGACGCACCACGCTACAAACGAACGCCTCACGACGACGATAAACGC
TCACGAATGAGGTAGTCATGGTAACGAAATGCGCCATCATTAAGAAGAAA
TCTAAGGTATGATAATTACATTGTATCATAACATTCTTTCATTCAACATT
TTTGCATTTGCTTGTTACTGTTTTGAATGACGTAATAATGACGTAATTAT
GAACATAGACGTCGCACGCATGGTATATTGGATCAACAGGAGCTGGTCCA
AAACAGGTTTGAATCCTGTTGTAACTACAGTAGTTTGTCTTTCTCGTATG
GTATCATACTCCCTGAAAATCCAGGCGGGTCACCATAACGATTGAGTTGA
CGTAAAATGGGCATCAATGATACCCTGGTGGCGTGTTAGAAACTGAAACC
AGGNTTAACGATTGAGTTGGCGTAAAATGGGCATCAATGATACCCTGGTG
GCGTGTTAGAAACTGAAACCAGGAAAGATTTTCAAAGCGAAATTGTTTTA
GATGGCTCAAAAAACCCATCGATTAATTAACGTAGAGTTATTTTCTGACG
CACGAGGCCCAATGTGTAATGCTACAGGCTTTGTCTGGACCTCGCTGTTT
TAATTAAAAATTTTTTGGATTGTAATTGATCATATACATTGACATTTATA
TTCCAAGAATCATGGGGCTTTTTGAATTTGTGGTCGAGTCAAACCATGCA
TCGATATAAAAGACACCCTGACGTTGATGAACAATGAAAAAGTAACTGAA
TAGACTTATACTATACATTTTCCGAGAACTGTGTGTTTTAATGTGCTCGC
GACATTAAAATCCAAGAAATTCTGTCGAGGTTGAATTTCCAAATAAAATG
CTAATCGGTGCCTTGTCTTAACACATTTAATGAAGTCTTTATCCAGGAAA
GTTTTGGTTGGTTACGAAAACATTAATGCATTTTCTAATGGTATGAAATT
CACCATGACGTATTATTGTTTGGCTTGACTTGATTATTATTTGGAAAAAG
ACATTCTTCCACGGACTTCTTTTCTTAACGAACCTCGTGACATTCCTATT
CAGGAAGCGTGGTCAATTTTATTGGCATTGGATTGTTTCATGACACATTT
AACCTAAGTCCTTATTCACCTTCATTCTTTATCACGAACCTATCTGAACT
CATGTTGTGCAAATCTAGCACGTATCCTGGAAATGAGCTAATGGTTCACG
CATTAACTTTACCTTGATGACTAATGTAATTATTATACTGTAATTGTTTT
TGAATGATGCAACCAATCATAACCGGGGGTAATGGAATTGGTTGGGTTGA
TACAATTTAAAGCCTACATTATGACGTCTATCCGTGAGAAATTGTATGAA
TTTGTAACAGTTTTTTTAAAGAAAAGAAATATCCATTTTAGATTTTCAAC
CATATTAAGTTATATATGTCATTGTCAATCTTGATCTCTTTTTGACAGCG
TTTCTATAACAGGAATACATAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00052473-exon-scaffold_214-1575043694:330249..330474 | TCONS_00052473-exon-scaffold_214-1575043694:330249..330474 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1575043694:312719..313266 | TCONS_00052473-exon-scaffold_214-1575043694:312719..313266 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1575043694:311352..312167 | TCONS_00052473-exon-scaffold_214-1575043694:311352..312167 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1510915933:330249..330474 | TCONS_00052473-exon-scaffold_214-1510915933:330249..330474 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1510915933:312719..313266 | TCONS_00052473-exon-scaffold_214-1510915933:312719..313266 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1510915933:311352..312167 | TCONS_00052473-exon-scaffold_214-1510915933:311352..312167 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1491911889:330249..330474 | TCONS_00052473-exon-scaffold_214-1491911889:330249..330474 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1491911889:312719..313266 | TCONS_00052473-exon-scaffold_214-1491911889:312719..313266 | Clytia hemisphaerica | exon |
TCONS_00052473-exon-scaffold_214-1491911889:311352..312167 | TCONS_00052473-exon-scaffold_214-1491911889:311352..312167 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_214 | supercontig | scaffold_214:311352..330474 - |
Blast
BLAST of TCONS_00052473 vs. Swiss-Prot (Human)
Match: U1SBP (U11/U12 small nuclear ribonucleoprotein 35 kDa protein OS=Homo sapiens GN=SNRNP35 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 7.241e-52 Identity = 106/175 (60.57%), Postives = 123/175 (70.29%), Query Frame = 2
Query: 104 WHQHATFYHPMMAGSIDGTDVVPHDRAIVRATRAKYKPNKQVKGDPEKTLMVRHLPNQTKEISLRNVFSRYGDLQNCRLVRDAISGKSRGYAFVEYKCVRDCEEALRDSGDLVIDGQKVVVDRECERTLKGWIPXXXXXXXXXXXESGQLRFGGIERPFRRPI--PVNSKPLGRQ 622
W A Y P+ AGSIDGTD PHDRA+ RA A+Y PNK V GDP TL V L QTKE L+ VFSRYGD++ RLVRD ++G S+GYAF+EYK R +A RD+ LVID ++ VD E ERTLKGWIPRR GGG GGKKESGQLRFGG +RPFR+PI PV L R+
Sbjct: 4 WMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKGVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPVVKNDLYRE 178
The following BLAST results are available for this feature:
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