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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052424 ID=TCONS_00052424|Name=TCONS_00052424|organism=Clytia hemisphaerica|type=transcript|length=1105bp
ATTTTACTGCGTCTTAATGATAATCTTAAAGCAAAAATTGATTCTCTAAA
ATTGGTAGACTCTGTGAgaagcagattttgaaagccaataaATTTTATTC
AAGTTCATTAAGAAGGTGATTTACATTACAGTGGAGTTAACTTTTTGTAT
GGAATCGGGAAGAATAAAATTgggtctccaaaattttccccaaaaaaatc
TTTAGCTCCTCCTTTGGcttagagggcttcaaactttgtttAATCTGAGT
TTGGAAGCACTTTGTGCTgcctgctgatggtccttgtgaCTTTTTAAAGG
AAACTTTTAACCTGGAGTAGTTGGCCACTTAAGGTACTAATTCTGATCCC
TGGGTACTCAGGGATACTTACCAGTATTATTCAACTTTTACCAATGGGGA
AACTAAAATacacagtttttttataagaatatcctttataagaatttcta
tgatgaaatttgcaaaaaaaatttagaataaatgctaagaatatcaccat
catggaatttggcaactgaacctaagtgCTAAGTCCAGTTAGGGaagcca
tccaggatcctgccattctatcagccagcaaaaactgaATGACATTGTAA
CTGATTGTAAACTTaaagtttcttactattttccatcgaaaacaactgAA
AACATCAATACTTCCTAAaaccggagaccaaaacaaattatcttccatgA
TGtgggcgcccttttggatctattgctaactcatttaaaatggtggataG
CAGAGTTGCGGAAAGATGCTGCTGCTTCGGGTGTGGTAACGCCAAAATGC
CAAATATGATCAGCCAACAGAAGACGAGTTAGTTGCCTCGCaagttacgt
catacactccaccgTAGAGAAAGCGCTAACGGCATTTCATGTTTAGAAGA
ATATCTTATGCACTTAATTCTATAGTGCTTcattaaagatgaagaaggAG
AAAGATAAAAATTGAATAGTTTTTATGTTTATATAGGTTTGTTCTATCAT
TGtcgaaaattggagaaatttCTAGACTGTTGCAAATATTTTTTAcagcc
aaataattttttttatgacatgaatataagtttttttgattgcggccgct
tACAT Run BLAST on NCBI transcript from alignment at scaffold_213:743025..744129 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052424 ID=TCONS_00052424|Name=TCONS_00052424|organism=Clytia hemisphaerica|type=transcript|length=1105bp|location=Sequence derived from alignment at scaffold_213:743025..744129 (Clytia hemisphaerica)
ATGTaagcggccgcaatcaaaaaaacttatattcatgtcataaaaaaaat
tatttggctgTAAAAAATATTTGCAACAGTCTAGaaatttctccaatttt
cgaCAATGATAGAACAAACCTATATAAACATAAAAACTATTCAATTTTTA
TCTTTCTccttcttcatctttaatgAAGCACTATAGAATTAAGTGCATAA
GATATTCTTCTAAACATGAAATGCCGTTAGCGCTTTCTCTAcggtggagt
gtatgacgtaacttGCGAGGCAACTAACTCGTCTTCTGTTGGCTGATCAT
ATTTGGCATTTTGGCGTTACCACACCCGAAGCAGCAGCATCTTTCCGCAA
CTCTGCtatccaccattttaaatgagttagcaatagatccaaaagggcgc
ccaCATcatggaagataatttgttttggtctccggttTTAGGAAGTATTG
ATGTTTTcagttgttttcgatggaaaatagtaagaaactttAAGTTTACA
ATCAGTTACAATGTCATtcagtttttgctggctgatagaatggcaggatc
ctggatggcttCCCTAACTGGACTTAGcacttaggttcagttgccaaatt
ccatgatggtgatattcttagcatttattctaaattttttttgcaaattt
catcatagaaattcttataaaggatattcttataaaaaaactgtgtATTT
TAGTTTCCCCATTGGTAAAAGTTGAATAATACTGGTAAGTATCCCTGAGT
ACCCAGGGATCAGAATTAGTACCTTAAGTGGCCAACTACTCCAGGTTAAA
AGTTTCCTTTAAAAAGtcacaaggaccatcagcaggcAGCACAAAGTGCT
TCCAAACTCAGATTaaacaaagtttgaagccctctaagCCAAAGGAGGAG
CTAAAgatttttttggggaaaattttggagacccAATTTTATTCTTCCCG
ATTCCATACAAAAAGTTAACTCCACTGTAATGTAAATCACCTTCTTAATG
AACTTGAATAAAATttattggctttcaaaatctgcttcTCACAGAGTCTA
CCAATTTTAGAGAATCAATTTTTGCTTTAAGATTATCATTAAGACGCAGT
AAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052424-exon-scaffold_213-1491911889:743025..744129 | TCONS_00052424-exon-scaffold_213-1491911889:743025..744129 | Clytia hemisphaerica | exon |
| TCONS_00052424-exon-scaffold_213-1510915933:743025..744129 | TCONS_00052424-exon-scaffold_213-1510915933:743025..744129 | Clytia hemisphaerica | exon |
| TCONS_00052424-exon-scaffold_213-1575043694:743025..744129 | TCONS_00052424-exon-scaffold_213-1575043694:743025..744129 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:743025..744129 . |
Blast
The following BLAST results are available for this feature:
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