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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052359 ID=TCONS_00052359|Name=TCONS_00052359|organism=Clytia hemisphaerica|type=transcript|length=513bp
GAGTTTTTTTGAAGTCTTTGGCGTTCTCTATATTTTTTACCGAACGTCGA
ATCTGAACGTTGCTCTTCCCCAAGGAGTTTCGTTTTCCTGGACATTTGAT
ATTTGTGAGAGTATATAAATATGTGTGCTTTCCATAATGAAACATATTCT
TCAAAGACGATATTATCACGCGAAGAAACTCTTCTTTGAATCAAGACTGA
GAGGAGAAAAAATATCTCCAAAATGAAAGGACACGCCATAATTTTGATTG
CAGCTTTTTTCTTGGCAGTACTCTCGCTGGCTTATGCGTCAGACTGCAGT
GTTCATGGTATTTCAGAGATTTGCGGATCAGATGGGAAAACCTACCAAAA
TATCTGTTACTTCTTCGAAGCTAACGTTGGCAATGGAGTGACCATCATCA
GCCAAGGTCCTTGTTGATTAAAGAAAACTGATACTcgaaattttatttgt
aaataacACAATGATAACgtatattttttttgataagaaaatCACGAAAC
TGCTTTAAAAATC Run BLAST on NCBI transcript from alignment at scaffold_213:672636..673836- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052359 ID=TCONS_00052359|Name=TCONS_00052359|organism=Clytia hemisphaerica|type=transcript|length=1201bp|location=Sequence derived from alignment at scaffold_213:672636..673836- (Clytia hemisphaerica)
GAGTTTTTTTGAAGTCTTTGGCGTTCTCTATATTTTTTACCGAACGTCGA
ATCTGAACGTTGCTCTTCCCCAAGGAGTTTCGTTTTCCTGGACATTTGAT
ATTTGTGAGAGTATATAAATATGTGTGCTTTCCATAATGAAACATATTCT
TCAAAGACGATATTATCACGCGAAGAAACTCTTCTTTGAATCAAGACTGA
GAGGAGAAAAAATATCTCCAAAATGAAAGGACACGCCATAATTTTGATTG
CAGCTTTTTTCTTGGCAGTACTCTCGCTGGCTTATGGTAGGTCCAGTGTA
TTTGTCTGTAGGAATTTTTTTTCTTGTACATTTAGCCCATCTTTTGGGAA
TTGGGTACAAATTTTTTTAACCAATTTTACACCCCTGTGTCACAGTCTCG
GTGGAACTTTTCCCACAGTGGGGGGGGGGTGAACATTTCTTTTGAAATCC
CAATGGGAATAGAAATTCTATTGTTTCAAGGTCAAAAAATCCAGTGAGGA
TGATTTTGGAGTGTTTTTTTTTTAATTGAATTTCAAATGAGGAGGAAAAG
TTTTCCAGTGGGACTGAAATTGTTGGGTATTTTTCCTACCGGGGACAAAA
TTTTAGCCACATTTTCCTGCGGGTAGGGGGTTCCACTGAGACACGGTGCA
ATTTTTTTATCGTGGTTGGATTGAATTACGAGATTGACAAGAATTACCTA
AACCAAAATGAACCTCGTTGTTCTTAAAATTTTTAATTTTTAATTTTGCT
TATGAAGTTTCTTAAGGAAGTTTGAGGTCAATTATGAATAATGAAAAGCG
TCGAATAAGAGTGCGTCAACTGCATTTGAAAGAAATTATTTTTTTTGCAA
ACTTGAGGCTTCAGAAACTGTGACTGTTTGAAATTTTTAACAGGTGATTT
TAACTCAGATAAAGAATTAAAAAATAATAGCCCTTCAAAATTCTTTATTT
CAAAAGTTTTTTTCTCGTTTTCAGCGTCAGACTGCAGTGTTCATGGTATT
TCAGAGATTTGCGGATCAGATGGGAAAACCTACCAAAATATCTGTTACTT
CTTCGAAGCTAACGTTGGCAATGGAGTGACCATCATCAGCCAAGGTCCTT
GTTGATTAAAGAAAACTGATACTCGAAATTTTATTTGTAAATAACACAAT
GATAACGTATATTTTTTTTGATAAGAAAATCACGAAACTGCTTTAAAAAT
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052359-exon-scaffold_213-1575043694:673551..673836 | TCONS_00052359-exon-scaffold_213-1575043694:673551..673836 | Clytia hemisphaerica | exon |
| TCONS_00052359-exon-scaffold_213-1575043694:672636..672862 | TCONS_00052359-exon-scaffold_213-1575043694:672636..672862 | Clytia hemisphaerica | exon |
| TCONS_00052359-exon-scaffold_213-1510915933:673551..673836 | TCONS_00052359-exon-scaffold_213-1510915933:673551..673836 | Clytia hemisphaerica | exon |
| TCONS_00052359-exon-scaffold_213-1510915933:672636..672862 | TCONS_00052359-exon-scaffold_213-1510915933:672636..672862 | Clytia hemisphaerica | exon |
| TCONS_00052359-exon-scaffold_213-1491911889:673551..673836 | TCONS_00052359-exon-scaffold_213-1491911889:673551..673836 | Clytia hemisphaerica | exon |
| TCONS_00052359-exon-scaffold_213-1491911889:672636..672862 | TCONS_00052359-exon-scaffold_213-1491911889:672636..672862 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_213 | supercontig | scaffold_213:672636..673836 - |
Blast
The following BLAST results are available for this feature:
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