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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052170 ID=TCONS_00052170|Name=TCONS_00052170|organism=Clytia hemisphaerica|type=transcript|length=625bp GGGCTGCCATCTTGACTGCACCGTCGGGTAAGTCAGCCATTGATAAATCA CGCTTTTTCATTCCCAGCCCACTTCCTTCACCCAAAGAACGTTTCTTTTT CAAAGGTGGTATAAAGCCGCTGGCTTCCACGGAACGTCGTTTTCGTAGAT TCAAACCACTTCCCTCTTCCATGGAGCGCCGTTTAAGCAAATTTACTCCA CTTCCCTCTTCGATGGAGCGCCGTTTGCGTAAATTCAAAACACTTCCCTC TTCCATGGAGCGCCGTTTGCGCAAATTTAATCCACTACCTTCATCGATGG AGCGCCGCCTCAAATTCATTCCACTGCTTTCTCCAACAGATCTTTGCTTT CTAGCGAAAGATCCGCTTCCCTCTTCTAAAGAACGTCTTCTACGAACAGG AGTTGCGCCACTGCCTTCAGAAATAGAGCGTTTCTTCTTAGTTTCTGTAG CAAGGTCTTTGTCAGCAGCTCGTTTACCAGGCATAGATTTGATGTGTTTG TAAGGAACAAAATCGAGGAtgtctctcttcttttgtttttccttgGCGGC TTTTTGTCCATATTTCTGAACAAATTCTCCTTCGTCACCATCTCCGATGG TCATTCGACGGTATTCGAAACGAGA Run BLAST on NCBI protein sequence of TCONS_00052170-protein >TCONS_00052170-protein ID=TCONS_00052170-protein|Name=TCONS_00052170-protein|organism=Clytia hemisphaerica|type=polypeptide|length=208bp
SRFEYRRMTIGDGDEGEFVQKYGQKAAKEKQKKRDILDFVPYKHIKSMPG KRAADKDLATETKKKRSISEGSGATPVRRRRSLEEGSGSFARKQRSVGES SGMNLRRRSIDEGSGLNLRKRRSMEEGSVLNLRKRRSIEEGSGVNLLKRR SMEEGSGLNLRKRRSVEASGFIPPLKKKRSLGEGSGLGMKKRDLSMADLP DGAVKMAA Run BLAST on NCBI transcript from alignment at scaffold_211:41945..42569 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052170 ID=TCONS_00052170|Name=TCONS_00052170|organism=Clytia hemisphaerica|type=transcript|length=625bp|location=Sequence derived from alignment at scaffold_211:41945..42569 (Clytia hemisphaerica) TCTCGTTTCGAATACCGTCGAATGACCATCGGAGATGGTGACGAAGGAGA
ATTTGTTCAGAAATATGGACAAAAAGCCGCcaaggaaaaacaaaagaaga
gagacaTCCTCGATTTTGTTCCTTACAAACACATCAAATCTATGCCTGGT
AAACGAGCTGCTGACAAAGACCTTGCTACAGAAACTAAGAAGAAACGCTC
TATTTCTGAAGGCAGTGGCGCAACTCCTGTTCGTAGAAGACGTTCTTTAG
AAGAGGGAAGCGGATCTTTCGCTAGAAAGCAAAGATCTGTTGGAGAAAGC
AGTGGAATGAATTTGAGGCGGCGCTCCATCGATGAAGGTAGTGGATTAAA
TTTGCGCAAACGGCGCTCCATGGAAGAGGGAAGTGTTTTGAATTTACGCA
AACGGCGCTCCATCGAAGAGGGAAGTGGAGTAAATTTGCTTAAACGGCGC
TCCATGGAAGAGGGAAGTGGTTTGAATCTACGAAAACGACGTTCCGTGGA
AGCCAGCGGCTTTATACCACCTTTGAAAAAGAAACGTTCTTTGGGTGAAG
GAAGTGGGCTGGGAATGAAAAAGCGTGATTTATCAATGGCTGACTTACCC
GACGGTGCAGTCAAGATGGCAGCCC Coding sequence (CDS) from alignment at scaffold_211:41945..42569 >TCONS_00052170 ID=TCONS_00052170|Name=TCONS_00052170|organism=Clytia hemisphaerica|type=CDS|length=624bp|location=Sequence derived from alignment at scaffold_211:41945..42569 (Clytia hemisphaerica) TCTCGTTTCGAATACCGTCGAATGACCATCGGAGATGGTGACGAAGGAGA ATTTGTTCAGAAATATGGACAAAAAGCCGCcaaggaaaaacaaaagaaga gagacaTCCTCGATTTTGTTCCTTACAAACACATCAAATCTATGCCTGGT AAACGAGCTGCTGACAAAGACCTTGCTACAGAAACTAAGAAGAAACGCTC TATTTCTGAAGGCAGTGGCGCAACTCCTGTTCGTAGAAGACGTTCTTTAG AAGAGGGAAGCGGATCTTTCGCTAGAAAGCAAAGATCTGTTGGAGAAAGC AGTGGAATGAATTTGAGGCGGCGCTCCATCGATGAAGGTAGTGGATTAAA TTTGCGCAAACGGCGCTCCATGGAAGAGGGAAGTGTTTTGAATTTACGCA AACGGCGCTCCATCGAAGAGGGAAGTGGAGTAAATTTGCTTAAACGGCGC TCCATGGAAGAGGGAAGTGGTTTGAATCTACGAAAACGACGTTCCGTGGA AGCCAGCGGCTTTATACCACCTTTGAAAAAGAAACGTTCTTTGGGTGAAG GAAGTGGGCTGGGAATGAAAAAGCGTGATTTATCAATGGCTGACTTACCC GACGGTGCAGTCAAGATGGCAGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00052170-exon-scaffold_211-1491911889:41945..42569 | TCONS_00052170-exon-scaffold_211-1491911889:41945..42569 | Clytia hemisphaerica | exon |
TCONS_00052170-exon-scaffold_211-1510915933:41945..42569 | TCONS_00052170-exon-scaffold_211-1510915933:41945..42569 | Clytia hemisphaerica | exon |
TCONS_00052170-exon-scaffold_211-1575043694:41945..42569 | TCONS_00052170-exon-scaffold_211-1575043694:41945..42569 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_211 | supercontig | scaffold_211:41945..42569 . |
Blast
The following BLAST results are available for this feature:
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