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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052167 ID=TCONS_00052167|Name=TCONS_00052167|organism=Clytia hemisphaerica|type=transcript|length=973bp
ATCCAGACACGTAAACACCCAGTAATCATCACTTCATGCTACAGACCTAC
TGATTCCAATCTTCTTGTAGCTACCAACATTATGTAATGAAATCAACGAC
CTGAATAACACATTCAAAAACTCTCCACATTGGTTTGGTGGGGATACAAA
TCTTCCAGATATAGACTGGAACAATAACACTATTGTTAgcaataattaca
aaaaaaaacatcagcgAAGGCTTCCTCAAGACTTTTGACGATTGTGGCTT
TGAGCAGCTAGGCAAGTTTCCTACACGTCAGGAAAACACTCTTGACATCA
TCGCAACAAATCGACCAACTTTTGTCAGCAGAATAGCCTCTCACCCAGGT
TTTAGTGACCACGAAACAGCTGTTCTTCTTGACATGGTATGTCATCCTAT
TCGATCCAAACCTAGCAAACACAAAATCTTCATGTGGATCAAATTTCTGC
TGAAATTGCTGAGTTTACCACTACTTACAACTCTGAATCCCCTGTTAATG
ACATGTGGAAAACCCTCAAAGCTCTTATCGAAAATGCCATGCTATCCGTC
CCTTCAAAATACACATCAAGTCGTTATTCTCAACCTTGGATAACACAGAA
ATGTAAAAGGTTATCTCGGCGAAAGAAGAGGGCCTACAAGCGAgccaaaa
aatcatcaaaacctGCAGACTGGGATCGCTTCAAAAAGCTAACAAACGAA
TACAGGAAAGCTTGCAAATCAGCATTCAATAACTTTGTCAAAAACTGTGT
GTAAGCCCAGATGGGGTAAATAATCCCAAGAAACTGTTTCGATTCATAAA
ATCCCGCAAATGTGAAAATGATGGAGTAACACCCCTGCGAGACAACGGCA
GCTTACACATTGATAACACcaagcagttacatcaatatgccttcttacct
gtctttaaaaatataaataaaagtaatcacggaaaaggacgcgaaaaaaa
aagacataagtgtgagaacagag Run BLAST on NCBI transcript from alignment at scaffold_211:203467..204541- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052167 ID=TCONS_00052167|Name=TCONS_00052167|organism=Clytia hemisphaerica|type=transcript|length=1075bp|location=Sequence derived from alignment at scaffold_211:203467..204541- (Clytia hemisphaerica)
ATCCAGACACGTAAACACCCAGTAATCATCACTTCATGCTACAGACCTAC
TGATTCCAATCTTCTTGTAGCTACCAACATTATGTAATGAAATCAACGAC
CTGAATAACACATTCAAAAACTCTCCACATTGGTTTGGTGGGGATACAAA
TCTTCCAGATATAGACTGGAACAATAACACTATTGTTAGCAATAATTACA
AAAAAAAACATCAGCGAAGGCTTCCTCAAGACTTTTGACGATTGTGGCTT
TGAGCAGCTAGGCAAGTTTCCTACACGTCAGGAAAACACTCTTGACATCA
TCGCAACAAATCGACCAACTTTTGTCAGCAGAATAGCCTCTCACCCAGGT
TTTAGTGACCACGAAACAGCTGTTCTTCTTGACATGGTATGTCATCCTAT
TCGATCCAAACCTAGCAAACACAAAATCTTCATGTGGATCAAATTTCTGC
TGAAATTGCTGAGTTTACCACTACTTACAACTCTGAATCCCCTGTTAATG
ACATGTGGAAAACCCTCAAAGCTCTTATCGAAAATGCCATGCTATCCGTC
CCTTCAAAATACACATCAAGTCGTTATTCTCAACCTTGGATAACACAGAA
ATGTAAAAGGTTATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAG
AAATGTAAAAGGTTATCTCGGCGAAAGAAGAGGGCCTACAAGCGAGCCAA
AAAATCATCAAAACCTGCAGACTGGGATCGCTTCAAAAAGCTAACAAACG
AATACAGGAAAGCTTGCAAATCAGCATTCAATAACTTTGTCAAAAACTGT
GTGTAAGCCCAGATGGGGTAAATAATCCCAAGAAACTGTTTCGATTCATA
AAATCCCGCAAATGTGAAAATGATGGAGTAACACCCCTGCGAGACAACGG
CAGCTTACACATTGATAACACCAAGCAGTTACATCAATATGCCTTCTTAC
CTGTCTTTAAAAATATAAATAAAAGTAATCACGGAAAAGGACGCGAAAAA
AAAAGACATAAGTGTGAGAACAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052167-exon-scaffold_211-1575043694:203933..204541 | TCONS_00052167-exon-scaffold_211-1575043694:203933..204541 | Clytia hemisphaerica | exon |
| TCONS_00052167-exon-scaffold_211-1575043694:203467..203830 | TCONS_00052167-exon-scaffold_211-1575043694:203467..203830 | Clytia hemisphaerica | exon |
| TCONS_00052167-exon-scaffold_211-1510915933:203933..204541 | TCONS_00052167-exon-scaffold_211-1510915933:203933..204541 | Clytia hemisphaerica | exon |
| TCONS_00052167-exon-scaffold_211-1510915933:203467..203830 | TCONS_00052167-exon-scaffold_211-1510915933:203467..203830 | Clytia hemisphaerica | exon |
| TCONS_00052167-exon-scaffold_211-1491911889:203933..204541 | TCONS_00052167-exon-scaffold_211-1491911889:203933..204541 | Clytia hemisphaerica | exon |
| TCONS_00052167-exon-scaffold_211-1491911889:203467..203830 | TCONS_00052167-exon-scaffold_211-1491911889:203467..203830 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_211 | supercontig | scaffold_211:203467..204541 - |
Blast
The following BLAST results are available for this feature:
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