TCONS_00052164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052164
Unique NameTCONS_00052164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1816

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052164 ID=TCONS_00052164|Name=TCONS_00052164|organism=Clytia hemisphaerica|type=transcript|length=1816bp
CCAGGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACC
ATCAAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAA
GAACCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCAT
TGAATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAGTCTATGGG
TATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTTGTATGGGTATTGTG
ATTCTGATTGGATTGGGAAAGTGTTGCAAATGGGAACCAAGCCATGGAAA
AAATTACGATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGTTGTGCA
AAAAAGCATCAAGGAATCAAGGGCGCAACGATAGAAATGAAAATGGTGAC
CCTTATGAGAGGCCAGTAGCCATGCAATTAGATGAAATTATTGTGTACCA
ACAAGGACGAAGAGTGACTCtcgaaaatgatgaaaaaactcAATTGTTGA
AAGAAACCATAGAGAACCAACAAAGTGATTCTGATCGAAGTTCACCATTT
TCGCCTCAACGATCTTCAAAGAGAGCAAGTTCCAAACACAATAGCGTGCA
TTTCAGCCCAGACCGCGTTTCTTCACCTAGCCTGAAAGCGAAACAAGCTT
TAcaaaaaattaaatgtttaaCAAAAACACTATCAGCCTCTGGGACAACA
CCTGATAATAAACCAACAGTTGAGAATTTCCAGGCTAGACCTTTACCTCC
ATTGCCAACTTCACCAGAGTTTGTTCTACAAGAAGATTCACCTTTCAAAA
TTCACAGTCTATTTGACACTAGCCTGGATGAGCAACGTCATAACTCACAC
GGTGAGACAAAGGCTAAATTAAAATTAGAAGACCTTGAAAGACGCCTCCA
AAAGAACTCTAGTCAACAAGACTTATACTTGATTGACTTTAcatcaaaaa
ggaaaaacacTTTATCGGAATTTAGAAAACATAAATCGACCTATAAAAAT
CGTGCAAAGGAGATAAGTATGTTTGAGATGCTGCGGAATCGATCTAGTTC
CATCGATGAGCGATTATCAGAAGCATCATTGAAACGACAGCGAACTCGCG
TAAGACGATCACGAAGTTTAGACGACTTGGATAATGTTACGGTAAACGAA
ATCTATGTCGATATCAAAACGTATGAGGAAGTACCTGAAGAAATGCAAAA
ACAAACCCCCCTGAAAGAACCATACGATAGCAACCGTGTAACGGAATATT
CACCTAGAGACGGGGGCTTAGCTATGATGTCTCCCCGAGACGGGGGTATG
ACAGTTAGTACAAATACAATTTATGGTACAATCAAAGGTGAAAACGCATA
CGCAAGAATCACCGACCTACCTGCGGTTGCAAATCGATTAGCAATACAGA
ACCGCCCAATGCCGCCCACTCCAACTTTACTGGACTTGTGTTTCATGAAG
CAGAATCCCGCCTTGCCACCCCATCAACAGaataaaaaaccaaaaaacca
tATCTATCAGAGAGCAAATCGCGGGAGACCTCTTTCGCAACAATTTCCAT
CTTTTAGAAGTAGTATTTCAGGTACAAGCGGACCCTATGCCAAGATCAAC
GATGTTATGGGCTTACcaagaaattcaagattttattCATCAAGTTAATA
TTATCATAGATTTCGAACTGTAAAGGGTGTAGATTTGTTGCAGTTTTAAT
GCATCTTATTTTTGTGTAAATAGAAAAGGCAGtttatattttgatgaaat
aaaaaatcattcatACCATGTCTTTTTTGCTCAGCTCTCTCCAAAAGTGT
GTGATAGAAGTGGTCT
Run BLAST on NCBI

protein sequence of TCONS_00052164-protein

>TCONS_00052164-protein ID=TCONS_00052164-protein|Name=TCONS_00052164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
QARKYEKMNSRGDLPNHQNRYDVYNWLSQLTTKEPLINQWLNEGDGNHVI
ELYKNNGNQSNGPSLWVWVVCFLSVAVICMGIVILIGLGKCCKWEPSHGK
NYDLWKLTKTGARKLCKKASRNQGRNDRNENGDPYERPVAMQLDEIIVYQ
QGRRVTLENDEKTQLLKETIENQQSDSDRSSPFSPQRSSKRASSKHNSVH
FSPDRVSSPSLKAKQALQKIKCLTKTLSASGTTPDNKPTVENFQARPLPP
LPTSPEFVLQEDSPFKIHSLFDTSLDEQRHNSHGETKAKLKLEDLERRLQ
KNSSQQDLYLIDFTSKRKNTLSEFRKHKSTYKNRAKEISMFEMLRNRSSS
IDERLSEASLKRQRTRVRRSRSLDDLDNVTVNEIYVDIKTYEEVPEEMQK
QTPLKEPYDSNRVTEYSPRDGGLAMMSPRDGGMTVSTNTIYGTIKGENAY
ARITDLPAVANRLAIQNRPMPPTPTLLDLCFMKQNPALPPHQQNKKPKNH
IYQRANRGRPLSQQFPSFRSSISGTSGPYAKINDVMGLPRNSRFYSSS
Run BLAST on NCBI

transcript from alignment at scaffold_211:17365..22065-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052164 ID=TCONS_00052164|Name=TCONS_00052164|organism=Clytia hemisphaerica|type=transcript|length=4701bp|location=Sequence derived from alignment at scaffold_211:17365..22065- (Clytia hemisphaerica)
CCAGGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACC ATCAAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAA GAACCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCAT TGAATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAGTAAGTTAA ACTCTCAACCTTTTACTTGGACCCAATAGGGGTTGAAATAGCGAGTTTGT GTGTTTTTCTGCAACGGAAACGGATAGCTTCAGACCAGCTGAGGACGACG GTAAAAAAAGGCACTTTTACTGTCCTCGACTTTGCGGGTCAGAACAGCGG GTTTTTTTTAATCCGCTGGATACACTCTTCATTACAAACAAGAGTCCCTT TAAAAATGATTTCCCTTTCAACTCCTTCAAAATCTAATAAAAATACATCT TACATAACACGAAAAAGCCTGAAATTCCAAAGAATTTTCTCCACCCATTT CTGGTCGACCATGGTTCAAATGGTTACTTCTTAAAACAGATACTTGGTGT ATCGATTATTTGTCTAAAGTAGTCAATACCAGCAATATTTATGTGAATTT TTCAGGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTT GTATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGGTAA GTCTTCATTTTAGAATCTGTTTTACCGAGATGGGGAATCCGACTTTGGAG TGAGTTTAGAGCGAATCAACACATGTCAGANNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCTCCACCCATTTCTGGTC GACCATGGTTCAAATGGTTACTTCTTAAAACAGATACTTGGTGTATCGAT TATTTGTCTAAAGTAGTCAATACCAGCAATATTTATGTGAATTTTTCAGG TCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTTGTATGG GTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGGTAAGTCTTC ATTTTAGAATCTGTTTTACCGAGATGGGGAATCCGACTTTGGAGTGAGTT TAGAGCGAATCAACACATGTCAGACACCGATAGAGGAAATTTTACAAACA CCAATTTCATTGGTTTTGATAGTTGAAAGGAAAGATTTGCACTTGAAACA TCCCTGTCACACAGCCCCGGTGAAACCCATAGTGAGGATAAATAGGAATT TTAATTTTTCTGCGGTCAAAGGTCATTGGGGATGGTATTGGAGAGCAATT TTTTCCATTGAATTTTTTAAATGGGATGAAAACAAAGTTTTCTAGTGGGG CTGAAATTGTTGGGTATTTCTCCCACCGGGACGGAATTTTTGGCTAAATT GTTGAGTGAGGCGGGTCTGTGACAAAGGGATGTCTTGAAAATCGTTAACG ATTATCCAAATGAAACTGTATGGACTGGCGTTTCTTGTCGGGAAGAAAAT ATTCAAAAACACTGAATAATCGATCATGGTTGTTACCATTTCCAACTACC TCGTAACCAATATTTTTTTAATGTATTCGTTGTTTTAACTTAAATTACTG ACTTTGCGAGAAAAGATCACTTTTATTAGAAATCGGTGTCGAATAAAGAT TTGGCAGTACAGATAACGAAGTGACGGTTCTCAAAACAATACATGCTGAA TGATATCACTTTTATTTTCAAACAGGGAACCAAGCCATGGAAAAAATTAC GATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGTTGTGCAAAAAGTA GGTCTTTATTTTATCGTTTATCAGTACTTTTCTTAATAATGCGATTGTTC TTTTAAAGAAAGCTAACTTGGGACACTACTCTTGGGCGGTACTTTTCTCT AATTTAATTTTTGCAATGAGAATTCTAATTCTTTTATTCAGAGCATCAAG GAATCAAGGGCGCAACGATAGAAATGGTATGACGTTTGTTTCTTTGTAAA CCTACTCGAGGAAGGTAGAAGTACAAATAGTCTCTCGAAACCTAGCCAAA CGTTAATTTAGTTATCCACGATTAACTTCAAATCTAATTGGGTAGAAAAC TTTTCAATTCGCCAAAATCAATTAGCCAGGGGATGCTTAGTAGATCCCAG AGTATATTCGACACAAAACAGATTGAATGTTTTTATTGGTTGTTCTGAAA GAAAGGTTCACTCCTCAATGCTGATAGCCATAAAATTAAATTCATTGATT CATAGAAAATGGTGACCCTTATGAGAGGCCAGTAGCCATGCAATTAGATG AAATTATTGTGTACCAACAAGGACGAAGAGTGACTCTCGAAAATGATGAA AAAACTCAATTGTTGAAAGAAACCATAGAGAACCAACAAAGTGGTAAGAA ATTCTAGATCTCAAATGTAACAGAAGACAAGAACTGAAATTCCACAAAAA AAATTTATGTTGTCTGTAGCATTATTACATTCAGCTTTCTTTTTAAATTA AGATGGCATGAAAAGGTATAAAGTTTTTTTTTGGATTTCAAATGCGCGTA CACCCCTTAACTAGGTCTTAGGTCCATACCTAACAAAGATTGGGCCATCT CATATAATGCCAGTGGCACTTGATGGGTTAATCAGACAAGTCTTGACCGA AGGTCTTCAACAATAGCCTACAAATTCAGTAAACTTAACTCCTTGAATTC GTATTTTTTTAGATTCTGATCGAAGTTCACCATTTTCGCCTCAACGATCT TCAAAGAGAGCAAGTTCCAAACACAATAGCGTGCATTTCAGCCCAGACCG CGTTTCTTCACCTAGCCTGAAAGCGAAACAAGCTTTACAAAAAATTAAAT GTTTAACAAAAACACTATCAGCCTCTGGGACAACACCTGATAATAAACCA ACAGTTGAGAATTTCCAGGCTAGACCTTTACCTCCATTGCCAACTTCACC AGAGTTTGTTCTACAAGAAGATTCACCTTTCAAAATTCACAGTCTATTTG ACACTAGCCTGGATGAGCAACGTCATAACTCACACGGTGAGACAAAGGCT AAATTAAAATTAGAAGACCTTGAAAGACGCCTCCAAAAGAACTCTAGTCA ACAAGACTTATACTTGATTGACTTTACATCAAAAAGGAAAAACACTTTAT CGGAATTTAGAAAACATAAATCGACCTATAAAAATCGTGCAAAGGAGATA AGTATGTTTGAGATGCTGCGGAATCGATCTAGTTCCATCGATGAGCGATT ATCAGAAGCATCATTGAAACGACAGCGAACTCGCGTAAGACGATCACGAA GTTTAGACGACTTGGATAATGTTACGGTAAACGAAATCTATGTCGATATC AAAACGTATGAGGAAGTACCTGAAGAAATGCAAAAACAAACCCCCCTGAA AGAACCATACGATAGCAACCGTGTAACGGAATATTCACCTAGAGACGGGG GCTTAGCTATGATGTCTCCCCGAGACGGGGGTATGACAGTTAGTACAAAT ACAATTTATGGTACAATCAAAGGTGAAAACGCATACGCAAGAATCACCGA CCTACCTGCGGTTGCAAATCGATTAGCAATACAGAACCGCCCAATGCCGC CCACTCCAACTTTACTGGACTTGTGTTTCATGAAGCAGAATCCCGCCTTG CCACCCCATCAACAGAATAAAAAACCAAAAAACCATATCTATCAGAGAGC AAATCGCGGGAGACCTCTTTCGCAACAATTTCCATCTTTTAGAAGTAGTA TTTCAGGTACAAGCGGACCCTATGCCAAGATCAACGATGTTATGGGCTTA CCAAGAAATTCAAGATTTTATTCATCAAGTTAATATTATCATAGATTTCG AACTGTAAAGGGTGTAGATTTGTTGCAGTTTTAATGCATCTTATTTTTGT GTAAATAGAAAAGGCAGTTTATATTTTGATGAAATAAAAAATCATTCATA CCATGTCTTTTTTGCTCAGCTCTCTCCAAAAGTGTGTGATAGAAGTGGTC T

Coding sequence (CDS) from alignment at scaffold_211:17365..22065-

>TCONS_00052164 ID=TCONS_00052164|Name=TCONS_00052164|organism=Clytia hemisphaerica|type=CDS|length=9882bp|location=Sequence derived from alignment at scaffold_211:17365..22065- (Clytia hemisphaerica)
ATTCTGATCGAAGTTCACCATTTTCGCCTCAACGATCTTCAAAGAGAGCA
AGTTCCAAACACAATAGCGTGCATTTCAGCCCAGACCGCGTTTCTTCACC
TAGCCTGAAAGCGAAACAAGCTTTACAAAAAATTAAATGTTTAACAAAAA
CACTATCAGCCTCTGGGACAACACCTGATAATAAACCAACAGTTGAGAAT
TTCCAGGCTAGACCTTTACCTCCATTGCCAACTTCACCAGAGTTTGTTCT
ACAAGAAGATTCACCTTTCAAAATTCACAGTCTATTTGACACTAGCCTGG
ATGAGCAACGTCATAACTCACACGGTGAGACAAAGGCTAAATTAAAATTA
GAAGACCTTGAAAGACGCCTCCAAAAGAACTCTAGTCAACAAGACTTATA
CTTGATTGACTTTACATCAAAAAGGAAAAACACTTTATCGGAATTTAGAA
AACATAAATCGACCTATAAAAATCGTGCAAAGGAGATAAGTATGTTTGAG
ATGCTGCGGAATCGATCTAGTTCCATCGATGAGCGATTATCAGAAGCATC
ATTGAAACGACAGCGAACTCGCGTAAGACGATCACGAAGTTTAGACGACT
TGGATAATGTTACGGTAAACGAAATCTATGTCGATATCAAAACGTATGAG
GAAGTACCTGAAGAAATGCAAAAACAAACCCCCCTGAAAGAACCATACGA
TAGCAACCGTGTAACGGAATATTCACCTAGAGACGGGGGCTTAGCTATGA
TGTCTCCCCGAGACGGGGGTATGACAGTTAGTACAAATACAATTTATGGT
ACAATCAAAGGTGAAAACGCATACGCAAGAATCACCGACCTACCTGCGGT
TGCAAATCGATTAGCAATACAGAACCGCCCAATGCCGCCCACTCCAACTT
TACTGGACTTGTGTTTCATGAAGCAGAATCCCGCCTTGCCACCCCATCAA
CAGAATAAAAAACCAAAAAACCATATCTATCAGAGAGCAAATCGCGGGAG
ACCTCTTTCGCAACAATTTCCATCTTTTAGAAGTAGTATTTCAGGTACAA
GCGGACCCTATGCCAAGATCAACGATGTTATGGGCTTACCAAGAAATTCA
AGATTTTATTCATCAAGTTAAAAAATGGTGACCCTTATGAGAGGCCAGTA
GCCATGCAATTAGATGAAATTATTGTGTACCAACAAGGACGAAGAGTGAC
TCTCGAAAATGATGAAAAAACTCAATTGTTGAAAGAAACCATAGAGAACC
AACAAAGTGAGCATCAAGGAATCAAGGGCGCAACGATAGAAATGGGAACC
AAGCCATGGAAAAAATTACGATTTATGGAAATTGACCAAGACTGGTGCTC
GAAAGTTGTGCAAAAAGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGT
GGCTGTGATTTGTATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTT
GCAAATGCAGGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTAC
CAAACCATCAAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACA
ACAAAAGAACCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCA
TGTCATTGAATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAATT
CTGATCGAAGTTCACCATTTTCGCCTCAACGATCTTCAAAGAGAGCAAGT
TCCAAACACAATAGCGTGCATTTCAGCCCAGACCGCGTTTCTTCACCTAG
CCTGAAAGCGAAACAAGCTTTACAAAAAATTAAATGTTTAACAAAAACAC
TATCAGCCTCTGGGACAACACCTGATAATAAACCAACAGTTGAGAATTTC
CAGGCTAGACCTTTACCTCCATTGCCAACTTCACCAGAGTTTGTTCTACA
AGAAGATTCACCTTTCAAAATTCACAGTCTATTTGACACTAGCCTGGATG
AGCAACGTCATAACTCACACGGTGAGACAAAGGCTAAATTAAAATTAGAA
GACCTTGAAAGACGCCTCCAAAAGAACTCTAGTCAACAAGACTTATACTT
GATTGACTTTACATCAAAAAGGAAAAACACTTTATCGGAATTTAGAAAAC
ATAAATCGACCTATAAAAATCGTGCAAAGGAGATAAGTATGTTTGAGATG
CTGCGGAATCGATCTAGTTCCATCGATGAGCGATTATCAGAAGCATCATT
GAAACGACAGCGAACTCGCGTAAGACGATCACGAAGTTTAGACGACTTGG
ATAATGTTACGGTAAACGAAATCTATGTCGATATCAAAACGTATGAGGAA
GTACCTGAAGAAATGCAAAAACAAACCCCCCTGAAAGAACCATACGATAG
CAACCGTGTAACGGAATATTCACCTAGAGACGGGGGCTTAGCTATGATGT
CTCCCCGAGACGGGGGTATGACAGTTAGTACAAATACAATTTATGGTACA
ATCAAAGGTGAAAACGCATACGCAAGAATCACCGACCTACCTGCGGTTGC
AAATCGATTAGCAATACAGAACCGCCCAATGCCGCCCACTCCAACTTTAC
TGGACTTGTGTTTCATGAAGCAGAATCCCGCCTTGCCACCCCATCAACAG
AATAAAAAACCAAAAAACCATATCTATCAGAGAGCAAATCGCGGGAGACC
TCTTTCGCAACAATTTCCATCTTTTAGAAGTAGTATTTCAGGTACAAGCG
GACCCTATGCCAAGATCAACGATGTTATGGGCTTACCAAGAAATTCAAGA
TTTTATTCATCAAGTTAAAAAATGGTGACCCTTATGAGAGGCCAGTAGCC
ATGCAATTAGATGAAATTATTGTGTACCAACAAGGACGAAGAGTGACTCT
CGAAAATGATGAAAAAACTCAATTGTTGAAAGAAACCATAGAGAACCAAC
AAAGTGAGCATCAAGGAATCAAGGGCGCAACGATAGAAATGGGAACCAAG
CCATGGAAAAAATTACGATTTATGGAAATTGACCAAGACTGGTGCTCGAA
AGTTGTGCAAAAAGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGC
TGTGATTTGTATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCA
AATGCAGGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAA
ACCATCAAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACA
AAAGAACCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGT
CATTGAATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAATTCTG
ATCGAAGTTCACCATTTTCGCCTCAACGATCTTCAAAGAGAGCAAGTTCC
AAACACAATAGCGTGCATTTCAGCCCAGACCGCGTTTCTTCACCTAGCCT
GAAAGCGAAACAAGCTTTACAAAAAATTAAATGTTTAACAAAAACACTAT
CAGCCTCTGGGACAACACCTGATAATAAACCAACAGTTGAGAATTTCCAG
GCTAGACCTTTACCTCCATTGCCAACTTCACCAGAGTTTGTTCTACAAGA
AGATTCACCTTTCAAAATTCACAGTCTATTTGACACTAGCCTGGATGAGC
AACGTCATAACTCACACGGTGAGACAAAGGCTAAATTAAAATTAGAAGAC
CTTGAAAGACGCCTCCAAAAGAACTCTAGTCAACAAGACTTATACTTGAT
TGACTTTACATCAAAAAGGAAAAACACTTTATCGGAATTTAGAAAACATA
AATCGACCTATAAAAATCGTGCAAAGGAGATAAGTATGTTTGAGATGCTG
CGGAATCGATCTAGTTCCATCGATGAGCGATTATCAGAAGCATCATTGAA
ACGACAGCGAACTCGCGTAAGACGATCACGAAGTTTAGACGACTTGGATA
ATGTTACGGTAAACGAAATCTATGTCGATATCAAAACGTATGAGGAAGTA
CCTGAAGAAATGCAAAAACAAACCCCCCTGAAAGAACCATACGATAGCAA
CCGTGTAACGGAATATTCACCTAGAGACGGGGGCTTAGCTATGATGTCTC
CCCGAGACGGGGGTATGACAGTTAGTACAAATACAATTTATGGTACAATC
AAAGGTGAAAACGCATACGCAAGAATCACCGACCTACCTGCGGTTGCAAA
TCGATTAGCAATACAGAACCGCCCAATGCCGCCCACTCCAACTTTACTGG
ACTTGTGTTTCATGAAGCAGAATCCCGCCTTGCCACCCCATCAACAGAAT
AAAAAACCAAAAAACCATATCTATCAGAGAGCAAATCGCGGGAGACCTCT
TTCGCAACAATTTCCATCTTTTAGAAGTAGTATTTCAGGTACAAGCGGAC
CCTATGCCAAGATCAACGATGTTATGGGCTTACCAAGAAATTCAAGATTT
TATTCATCAAGTTAAAAAATGGTGACCCTTATGAGAGGCCAGTAGCCATG
CAATTAGATGAAATTATTGTGTACCAACAAGGACGAAGAGTGACTCTCGA
AAATGATGAAAAAACTCAATTGTTGAAAGAAACCATAGAGAACCAACAAA
GTGAGCATCAAGGAATCAAGGGCGCAACGATAGAAATGGGAACCAAGCCA
TGGAAAAAATTACGATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGT
TGTGCAAAAAGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGT
GATTTGTATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAAT
GCAGGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACC
ATCAAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAA
GAACCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCAT
TGAATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAATTCTGATC
GAAGTTCACCATTTTCGCCTCAACGATCTTCAAAGAGAGCAAGTTCCAAA
CACAATAGCGTGCATTTCAGCCCAGACCGCGTTTCTTCACCTAGCCTGAA
AGCGAAACAAGCTTTACAAAAAATTAAATGTTTAACAAAAACACTATCAG
CCTCTGGGACAACACCTGATAATAAACCAACAGTTGAGAATTTCCAGGCT
AGACCTTTACCTCCATTGCCAACTTCACCAGAGTTTGTTCTACAAGAAGA
TTCACCTTTCAAAATTCACAGTCTATTTGACACTAGCCTGGATGAGCAAC
GTCATAACTCACACGGTGAGACAAAGGCTAAATTAAAATTAGAAGACCTT
GAAAGACGCCTCCAAAAGAACTCTAGTCAACAAGACTTATACTTGATTGA
CTTTACATCAAAAAGGAAAAACACTTTATCGGAATTTAGAAAACATAAAT
CGACCTATAAAAATCGTGCAAAGGAGATAAGTATGTTTGAGATGCTGCGG
AATCGATCTAGTTCCATCGATGAGCGATTATCAGAAGCATCATTGAAACG
ACAGCGAACTCGCGTAAGACGATCACGAAGTTTAGACGACTTGGATAATG
TTACGGTAAACGAAATCTATGTCGATATCAAAACGTATGAGGAAGTACCT
GAAGAAATGCAAAAACAAACCCCCCTGAAAGAACCATACGATAGCAACCG
TGTAACGGAATATTCACCTAGAGACGGGGGCTTAGCTATGATGTCTCCCC
GAGACGGGGGTATGACAGTTAGTACAAATACAATTTATGGTACAATCAAA
GGTGAAAACGCATACGCAAGAATCACCGACCTACCTGCGGTTGCAAATCG
ATTAGCAATACAGAACCGCCCAATGCCGCCCACTCCAACTTTACTGGACT
TGTGTTTCATGAAGCAGAATCCCGCCTTGCCACCCCATCAACAGAATAAA
AAACCAAAAAACCATATCTATCAGAGAGCAAATCGCGGGAGACCTCTTTC
GCAACAATTTCCATCTTTTAGAAGTAGTATTTCAGGTACAAGCGGACCCT
ATGCCAAGATCAACGATGTTATGGGCTTACCAAGAAATTCAAGATTTTAT
TCATCAAGTTAAAAAATGGTGACCCTTATGAGAGGCCAGTAGCCATGCAA
TTAGATGAAATTATTGTGTACCAACAAGGACGAAGAGTGACTCTCGAAAA
TGATGAAAAAACTCAATTGTTGAAAGAAACCATAGAGAACCAACAAAGTG
AGCATCAAGGAATCAAGGGCGCAACGATAGAAATGGGAACCAAGCCATGG
AAAAAATTACGATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGTTGT
GCAAAAAGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGAT
TTGTATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGCA
GGCTAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACCATC
AAAACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAAGAA
CCTTTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCATTGA
ATTGTATAAAAACAATGGAAACCAATCGAATGGACCAAATTCTGATCGAA
GTTCACCATTTTCGCCTCAACGATCTTCAAAGAGAGCAAGTTCCAAACAC
AATAGCGTGCATTTCAGCCCAGACCGCGTTTCTTCACCTAGCCTGAAAGC
GAAACAAGCTTTACAAAAAATTAAATGTTTAACAAAAACACTATCAGCCT
CTGGGACAACACCTGATAATAAACCAACAGTTGAGAATTTCCAGGCTAGA
CCTTTACCTCCATTGCCAACTTCACCAGAGTTTGTTCTACAAGAAGATTC
ACCTTTCAAAATTCACAGTCTATTTGACACTAGCCTGGATGAGCAACGTC
ATAACTCACACGGTGAGACAAAGGCTAAATTAAAATTAGAAGACCTTGAA
AGACGCCTCCAAAAGAACTCTAGTCAACAAGACTTATACTTGATTGACTT
TACATCAAAAAGGAAAAACACTTTATCGGAATTTAGAAAACATAAATCGA
CCTATAAAAATCGTGCAAAGGAGATAAGTATGTTTGAGATGCTGCGGAAT
CGATCTAGTTCCATCGATGAGCGATTATCAGAAGCATCATTGAAACGACA
GCGAACTCGCGTAAGACGATCACGAAGTTTAGACGACTTGGATAATGTTA
CGGTAAACGAAATCTATGTCGATATCAAAACGTATGAGGAAGTACCTGAA
GAAATGCAAAAACAAACCCCCCTGAAAGAACCATACGATAGCAACCGTGT
AACGGAATATTCACCTAGAGACGGGGGCTTAGCTATGATGTCTCCCCGAG
ACGGGGGTATGACAGTTAGTACAAATACAATTTATGGTACAATCAAAGGT
GAAAACGCATACGCAAGAATCACCGACCTACCTGCGGTTGCAAATCGATT
AGCAATACAGAACCGCCCAATGCCGCCCACTCCAACTTTACTGGACTTGT
GTTTCATGAAGCAGAATCCCGCCTTGCCACCCCATCAACAGAATAAAAAA
CCAAAAAACCATATCTATCAGAGAGCAAATCGCGGGAGACCTCTTTCGCA
ACAATTTCCATCTTTTAGAAGTAGTATTTCAGGTACAAGCGGACCCTATG
CCAAGATCAACGATGTTATGGGCTTACCAAGAAATTCAAGATTTTATTCA
TCAAGTTAAAAAATGGTGACCCTTATGAGAGGCCAGTAGCCATGCAATTA
GATGAAATTATTGTGTACCAACAAGGACGAAGAGTGACTCTCGAAAATGA
TGAAAAAACTCAATTGTTGAAAGAAACCATAGAGAACCAACAAAGTGAGC
ATCAAGGAATCAAGGGCGCAACGATAGAAATGGGAACCAAGCCATGGAAA
AAATTACGATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGTTGTGCA
AAAAGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTTG
TATGGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGCAGGC
TAGAAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACCATCAAA
ACAGATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAAGAACCT
TTAATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCATTGAATT
GTATAAAAACAATGGAAACCAATCGAATGGACCAAATTCTGATCGAAGTT
CACCATTTTCGCCTCAACGATCTTCAAAGAGAGCAAGTTCCAAACACAAT
AGCGTGCATTTCAGCCCAGACCGCGTTTCTTCACCTAGCCTGAAAGCGAA
ACAAGCTTTACAAAAAATTAAATGTTTAACAAAAACACTATCAGCCTCTG
GGACAACACCTGATAATAAACCAACAGTTGAGAATTTCCAGGCTAGACCT
TTACCTCCATTGCCAACTTCACCAGAGTTTGTTCTACAAGAAGATTCACC
TTTCAAAATTCACAGTCTATTTGACACTAGCCTGGATGAGCAACGTCATA
ACTCACACGGTGAGACAAAGGCTAAATTAAAATTAGAAGACCTTGAAAGA
CGCCTCCAAAAGAACTCTAGTCAACAAGACTTATACTTGATTGACTTTAC
ATCAAAAAGGAAAAACACTTTATCGGAATTTAGAAAACATAAATCGACCT
ATAAAAATCGTGCAAAGGAGATAAGTATGTTTGAGATGCTGCGGAATCGA
TCTAGTTCCATCGATGAGCGATTATCAGAAGCATCATTGAAACGACAGCG
AACTCGCGTAAGACGATCACGAAGTTTAGACGACTTGGATAATGTTACGG
TAAACGAAATCTATGTCGATATCAAAACGTATGAGGAAGTACCTGAAGAA
ATGCAAAAACAAACCCCCCTGAAAGAACCATACGATAGCAACCGTGTAAC
GGAATATTCACCTAGAGACGGGGGCTTAGCTATGATGTCTCCCCGAGACG
GGGGTATGACAGTTAGTACAAATACAATTTATGGTACAATCAAAGGTGAA
AACGCATACGCAAGAATCACCGACCTACCTGCGGTTGCAAATCGATTAGC
AATACAGAACCGCCCAATGCCGCCCACTCCAACTTTACTGGACTTGTGTT
TCATGAAGCAGAATCCCGCCTTGCCACCCCATCAACAGAATAAAAAACCA
AAAAACCATATCTATCAGAGAGCAAATCGCGGGAGACCTCTTTCGCAACA
ATTTCCATCTTTTAGAAGTAGTATTTCAGGTACAAGCGGACCCTATGCCA
AGATCAACGATGTTATGGGCTTACCAAGAAATTCAAGATTTTATTCATCA
AGTTAAAAAATGGTGACCCTTATGAGAGGCCAGTAGCCATGCAATTAGAT
GAAATTATTGTGTACCAACAAGGACGAAGAGTGACTCTCGAAAATGATGA
AAAAACTCAATTGTTGAAAGAAACCATAGAGAACCAACAAAGTGAGCATC
AAGGAATCAAGGGCGCAACGATAGAAATGGGAACCAAGCCATGGAAAAAA
TTACGATTTATGGAAATTGACCAAGACTGGTGCTCGAAAGTTGTGCAAAA
AGTCTATGGGTATGGGTGGTTTGTTTTCTATCAGTGGCTGTGATTTGTAT
GGGTATTGTGATTCTGATTGGATTGGGAAAGTGTTGCAAATGCAGGCTAG
AAAATATGAGAAAATGAACAGCAGAGGTGACCTACCAAACCATCAAAACA
GATATGACGTGTACAACTGGTTGTCACAGCTTACAACAAAAGAACCTTTA
ATCAACCAATGGTTAAACGAAGGAGATGGAAACCATGTCATTGAATTGTA
TAAAAACAATGGAAACCAATCGAATGGACCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033029XLOC_033029Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052164-proteinTCONS_00052164-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052164-exon-scaffold_211-1575043694:21875..22065TCONS_00052164-exon-scaffold_211-1575043694:21875..22065Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1575043694:21370..21460TCONS_00052164-exon-scaffold_211-1575043694:21370..21460Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1575043694:19569..19640TCONS_00052164-exon-scaffold_211-1575043694:19569..19640Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1575043694:19390..19424TCONS_00052164-exon-scaffold_211-1575043694:19390..19424Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1575043694:18973..19110TCONS_00052164-exon-scaffold_211-1575043694:18973..19110Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1575043694:17365..18653TCONS_00052164-exon-scaffold_211-1575043694:17365..18653Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1510915933:21875..22065TCONS_00052164-exon-scaffold_211-1510915933:21875..22065Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1510915933:21370..21460TCONS_00052164-exon-scaffold_211-1510915933:21370..21460Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1510915933:19569..19640TCONS_00052164-exon-scaffold_211-1510915933:19569..19640Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1510915933:19390..19424TCONS_00052164-exon-scaffold_211-1510915933:19390..19424Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1510915933:18973..19110TCONS_00052164-exon-scaffold_211-1510915933:18973..19110Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1510915933:17365..18653TCONS_00052164-exon-scaffold_211-1510915933:17365..18653Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1491911889:21875..22065TCONS_00052164-exon-scaffold_211-1491911889:21875..22065Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1491911889:21370..21460TCONS_00052164-exon-scaffold_211-1491911889:21370..21460Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1491911889:19569..19640TCONS_00052164-exon-scaffold_211-1491911889:19569..19640Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1491911889:19390..19424TCONS_00052164-exon-scaffold_211-1491911889:19390..19424Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1491911889:18973..19110TCONS_00052164-exon-scaffold_211-1491911889:18973..19110Clytia hemisphaericaexon
TCONS_00052164-exon-scaffold_211-1491911889:17365..18653TCONS_00052164-exon-scaffold_211-1491911889:17365..18653Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_211supercontigscaffold_211:17365..22065 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.167057 0.107643 0.424944 0.464652 0 0.0117631 0.0425752 0.0398584 0.0744155 0.0691317 0.134389 0.0367579 0.78582 0.602538 0.40766 0.39014 7.96815 14.548 0.727519 0.638506 4.65328 4.24789 1.67283 2.98021 4.1836 4.08281 2.61852 3.26301 0.0857631 0.0873791
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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