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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00052111 ID=TCONS_00052111|Name=TCONS_00052111|organism=Clytia hemisphaerica|type=transcript|length=1126bp
atattccAATTATTCAGAGTGTAAAAAAACAAGCCACCATGCagGCTGAA
TGAACCTACCTAAAGGTCAACgttataaaaaaatagaaaaaaaggcaaac
tgaaaaatcagaaaaaaatactaaGCTAATGGCGAGAAATGATCGTTTTC
CCTAAAATTGACAAAacggaatttccccaaataagaaaatccgattttta
cggccaaaataaACTTTCCAGAATAAAcggcaaaaaatatttattcagtc
aaaCAATACAGCTTGGAACTCTTCCCTGGTTGGCAATAAAATGgactatt
tttttgttttattttgattgctAGTAAgtcaatcagtgacaaaatttGGG
TTATATGTTTCGATTTAatatttctaaatatttttttcacagtgatgata
ttctaagatcaaagaatcactgCTCTGAAAATGGAAATTACAGCTCAATT
CTTCAGGAAGCttattcttcattttccaaattgttttgattattatttTC
ATTCTTGGTATTTTTCCActcttaaatatctttttaacaagcacaaaacc
gctatttAATTTGAATTCTATCTATTTGCCGctgctgcagattatattga
aacAGACTTTAATTCAAAAAGTGCATCAACCTCCACAATAAGCGGACGAA
TAGGGTtggtgtccgttaattagaagtgtccgctttttagaaacttttta
aatttgtgcTCTTATTTTGGTATAAGGTACTATGAAGGGTTAAAAGTGTA
AAATTTTAGTCCCAAAGTGATTTTACAGGGACGGTAGGATATGGAAGAAC
AATAGAATGATTATTAAAATGCAACATGTTTAGTTTTTATGAATGTTAGT
CGTCTTGAGATTCCTGAAATTTATTACCTTATCGGTCCTTTTTACGCCga
ccctaatttaacgccggccccttttacgtcggcccttattccgccacagc
ctaattttgggcttacgccaattagggccgtaaaatCTTTCTGACTTTTA
GTAAAAGAGTACTCGTGCAAATTTTTAGGGTCTTATAGGTCCTCTAGATC
AGTTtctatgactttattgtgaaacgtgatataaaacccagctaaaatcg
cctaaaacttaaatttttaaatGCTG Run BLAST on NCBI transcript from alignment at scaffold_210:68548..69908+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00052111 ID=TCONS_00052111|Name=TCONS_00052111|organism=Clytia hemisphaerica|type=transcript|length=1361bp|location=Sequence derived from alignment at scaffold_210:68548..69908+ (Clytia hemisphaerica)
atattccAATTATTCAGAGTGTAAAAAAACAAGCCACCATGCaggtagac
tatgttatagtctaagacgaatcactatctaagaaaaaggctcaaagccg
aagaaaattcgcaaacggatTTTTTACCGAAAAGAGTTTACTGTCGGTAG
AGTTGCCGCCGATTTTTTCCTCGAAACTCTCCCACCGATTTtttcccgta
taccgccataacgccataccgccatattttcccgcctttactatcattgt
aacggacgataacatcgtctaccaTGCAGGCTGAATGAACCTACCTAAAG
GTCAACgttataaaaaaatagaaaaaaaggcaaactgaaaaatcagaaaa
aaatactaaGCTAATGGCGAGAAATGATCGTTTTCCCTAAAATTGACAAA
acggaatttccccaaataagaaaatccgatttttacggccaaaataaACT
TTCCAGAATAAAcggcaaaaaatatttattcagtcaaaCAATACAGCTTG
GAACTCTTCCCTGGTTGGCAATAAAATGgactatttttttgttttatttt
gattgctAGTAAgtcaatcagtgacaaaatttGGGTTATATGTTTCGATT
TAatatttctaaatatttttttcacagtgatgatattctaagatcaaaga
atcactgCTCTGAAAATGGAAATTACAGCTCAATTCTTCAGGAAGCttat
tcttcattttccaaattgttttgattattatttTCATTCTTGGTATTTTT
CCActcttaaatatctttttaacaagcacaaaaccgctatttAATTTGAA
TTCTATCTATTTGCCGctgctgcagattatattgaaacAGACTTTAATTC
AAAAAGTGCATCAACCTCCACAATAAGCGGACGAATAGGGTtggtgtccg
ttaattagaagtgtccgctttttagaaactttttaaatttgtgcTCTTAT
TTTGGTATAAGGTACTATGAAGGGTTAAAAGTGTAAAATTTTAGTCCCAA
AGTGATTTTACAGGGACGGTAGGATATGGAAGAACAATAGAATGATTATT
AAAATGCAACATGTTTAGTTTTTATGAATGTTAGTCGTCTTGAGATTCCT
GAAATTTATTACCTTATCGGTCCTTTTTACGCCgaccctaatttaacgcc
ggccccttttacgtcggcccttattccgccacagcctaattttgggctta
cgccaattagggccgtaaaatCTTTCTGACTTTTAGTAAAAGAGTACTCG
TGCAAATTTTTAGGGTCTTATAGGTCCTCTAGATCAGTTtctatgacttt
attgtgaaacgtgatataaaacccagctaaaatcgcctaaaacttaaatt
tttaaatGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00052111-exon-scaffold_210-1491911889:68548..68591 | TCONS_00052111-exon-scaffold_210-1491911889:68548..68591 | Clytia hemisphaerica | exon |
| TCONS_00052111-exon-scaffold_210-1510915933:68548..68591 | TCONS_00052111-exon-scaffold_210-1510915933:68548..68591 | Clytia hemisphaerica | exon |
| TCONS_00052111-exon-scaffold_210-1575043694:68548..68591 | TCONS_00052111-exon-scaffold_210-1575043694:68548..68591 | Clytia hemisphaerica | exon |
| TCONS_00052111-exon-scaffold_210-1491911889:68827..69908 | TCONS_00052111-exon-scaffold_210-1491911889:68827..69908 | Clytia hemisphaerica | exon |
| TCONS_00052111-exon-scaffold_210-1510915933:68827..69908 | TCONS_00052111-exon-scaffold_210-1510915933:68827..69908 | Clytia hemisphaerica | exon |
| TCONS_00052111-exon-scaffold_210-1575043694:68827..69908 | TCONS_00052111-exon-scaffold_210-1575043694:68827..69908 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_210 | supercontig | scaffold_210:68548..69908 + |
Blast
The following BLAST results are available for this feature:
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