TCONS_00052075 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052075
Unique NameTCONS_00052075
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3382

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052075 ID=TCONS_00052075|Name=TCONS_00052075|organism=Clytia hemisphaerica|type=transcript|length=3382bp
gtgaacataaaagaaattcaaacaaaGAATGAATTCTTACTCCAGTTTTA
CTGATGATTCCAACAACAATTGGAACGATAATGTTCGGCACCGTCGCACA
CGTGTTCGTTATCCCAATCAAAATGGCGGCATATTGGGGTGCAATATCTA
AATGGTTGACGCCAAAACCCGCCCATGCTATACCTACATGTTTAAACATA
ACATAATCCCAGCTCCGAAGATGAGAAGACCCGCAGAAATTTCATGGTAA
TAAATGTTCGGTGCAATCATGAACGAAAGCGCACTCAAGATGAACCCTGA
AAGGAGAAGTTAAACATCagAGCTTCACTCAAATATTTGGGGAAGGATGT
TTGAATCAAACCGAATGCCCATCCTTCGCACGTGTGGGCCACCGCAATTG
AAATGAAAGGTAAAGAAGTGAAGATTGAAAACCATGGAAGATCATCTGAA
AGCTGAAATGAAAAGTTGTGTTCATAGTAAAGGAGCAACTGCTATATATA
ATGCGAAAATGTTTGGCTATAATCCTCAGTGGATTGATAGTATTACAGAA
TCTTCTAACAGTTTCCTCGCAATCATGCAATGGTGAATCTATCCAAGACC
TGAATGCAACGTATATCATTGGAGGTTTGTTTCCCGTTCATTATCGTGTT
TCGGAAACAAATCAATATATATTCAACATTCTATCTATTGTATGGGTCGA
AGCGTTTTTGTTCGCTTTACGTGAAATCAACAATATCAAAGATCTGCTAC
CAGGTATTAAGCTAGGATACGATATCAAAGACACGTGTAATGATGGTATG
GTTGCTGAAAATCATGTCCTTGACCTGATGACAGATCGTAAATTCTTTCA
ATCATCACATCAAGCGTTTAGTAATTGGTACGCCCCATGTGAATGTTACG
ATGAGCAACAGTCAAAGATGATTGGAGTTGTTGGTGGTGCATCATCAACG
ATCTCGTCCATCGCTGCCCATACCCTAATTGCTGGCAACATACCACAGAT
ATCCTATGCCTCCACCAGTCCATTGCTATCCAACTCCAGGACGTATCCCA
ACTTCTTGAGGACCATACCCTCAgatttacaacaagtatcagtGGTAACT
GAGCTTCTCCAAGTCATGGATTGGACTTACGTTTCTTTGTTAGCCACTGA
TGATGATTTTGGGAGACTTGCTTTAAATCTTGTCCAAGAGAACTTCAAAC
AGAACAATATTTGTATCGCGTTAGAATATCTGTATAGTTCCAATCTTTCC
ACTGGAGATTTAGCTGAGATCACTAGAGGATTGTCTAAATACCAGAATAG
AACCAAAGTTGTTATCATATGGGCAACGGAGTTTTGGAATGTCGAAAAGA
TCATCACTAATACATCTAATGATGGCCTGGACGATATGTTATGGATAGTT
TTAAGCGAAAGTTGGATAACGAAGTTCCAATCAAATCTTCCTAGACGTCA
GCATGTTATAATGTTGCAATTAGAAGATTTTCAAGTAGAGAGTTTTGTAG
ATCATATGAATAAACTATCATTTGGATCAGACCTTGGCAATATATGGATG
CCACAATATTGGACAAGTCTTGGAATATGTCCTGAGAATGAGGGTGAGAG
AACAAAATATTGTTACGATCATTGGATTCCCGAAGGTCGAGTTTTAGGTC
GAAAATACAGTGAAAACGTAATAGCGTCTGTTTACGCGTTTGCATACGGT
CTTCATAAGACATTGGATTGTAATGAAAAGAACTGCGAACAGAAACCATT
TCTTGACTATGAAGCATTGAAATTGAACATCTTGGCAAATACATTTATAC
TACCGTCGACGAATTTGAGTATTGAATTTCAACCTAATGGAGACGTCAAT
GCAAACTCGTATCAAATCCGAATGttctcatttgaaaaaaatgttctccT
TGGCTCTTGGTCTAAAACTAACAATATTCAAATCAATCAAACTGAATTCT
GGCTTCATTATGATAATGAAAACCAATCTTCAACCAACATACCAGCTACT
TGCTCAACGCCTTGTAAACCTGGTTTCTATAAAAGACAAGAATCACAAAC
ATGTTGTTGGAGTTGTATACAATGTCCATACGATGAAGTCAGCTTAGGTA
TTGATTCGCTTGGCTGTCAAAAATGCGGACCACTGGAAATCGCCAATAAA
CAACAAGACAAATGCGTACCATTACCAAATAAAGAATTCTCACTGACTGC
ACAAACCGGATTAATAATTGGGATTATTTCTCTTGTCGGATTCATGTTCA
CATTATTTACGATtctggtatacatgatattatGGGAAACGCCAGGTGTC
AAATCCACAAATCGTGAATTATCTTTAATACagctggtctgtattttatt
aCTGTTCTGCTTTCCGGTCCTGAATTTATACACGCACAAGTCACTCTGCA
TTGCACGGCAAGTGATATTCGGCAGTCTTCATTCGTTAATTCTGGTCCTT
GTTTTATTAAAAACTTATAGACTATTTAAACTGTTTCAACCACAATTCTT
TAAGAAACACACACGTATGTTTCTAACTATTTCAGCACAAATTTTCTTCG
CTTTTTTTCTATTACTCATTGAAACAACAGTCCTGGCTATGTGGTATACA
GTACATCAACCAAGTATGATTTTATACAGTAGTAAAGGAGAAGGTGGTTA
TATTTACCATTGTGGCGATCACGAGAGTTACGTTTTATACGCTATTATCA
TTTACGTCATTTTACTGTCCTTGGCTAGTGGGTTTATAGCATTTCGAGCA
CGTAGCTTACCAGCCAATTTCAACGAAGCGCAATACATTTGGCTGGCTAT
GTTCACTTATTGTATTATTTGGTGTGCTTTCTTTCCACTCCATTTGAGTT
CgaataaactttacaaatcgaCTATATTATTATCGATGAACTTAGCAAGT
ACTTTTAGTTTGATTGCCATTTTGTTTGGTAATAAGATTCGAATGTTGGT
ATGCTTGCCGCACTTGAACAATAGGTTGCATTTCACCGGGTTGGCCGCTA
ATGCTTACATTCGAACGTTCTCGTTACGTCAGAGTGAGTCACCGGgaaag
aacaagaagaagaagatgaggGATAAGAAACGTGTGATCAGTTTTAGTTT
TGAACTGGAAAataatgtttaatttttaattgtGATGATATTTCCTATTT
TAGACCAAACCTTGTAAAACATTAACCCAAATGAAACTTCTTGttttttt
ccaataaaatttttgaatttttgactcAACCCGctcgttgttcttatttt
cttcaaaatttgccaGGTTTAACCATAGGAATAGTCCTACTAGGGGGAGC
TGTTTTTGTTCGGGGGTCGCAAACTAATTTTAATAGcccctgaaataata
gagcatTTGGcatgtaaattcctaacttttat
Run BLAST on NCBI

protein sequence of TCONS_00052075-protein

>TCONS_00052075-protein ID=TCONS_00052075-protein|Name=TCONS_00052075-protein|organism=Clytia hemisphaerica|type=polypeptide|length=873bp
MRKCLAIILSGLIVLQNLLTVSSQSCNGESIQDLNATYIIGGLFPVHYRV
SETNQYIFNILSIVWVEAFLFALREINNIKDLLPGIKLGYDIKDTCNDGM
VAENHVLDLMTDRKFFQSSHQAFSNWYAPCECYDEQQSKMIGVVGGASST
ISSIAAHTLIAGNIPQISYASTSPLLSNSRTYPNFLRTIPSDLQQVSVVT
ELLQVMDWTYVSLLATDDDFGRLALNLVQENFKQNNICIALEYLYSSNLS
TGDLAEITRGLSKYQNRTKVVIIWATEFWNVEKIITNTSNDGLDDMLWIV
LSESWITKFQSNLPRRQHVIMLQLEDFQVESFVDHMNKLSFGSDLGNIWM
PQYWTSLGICPENEGERTKYCYDHWIPEGRVLGRKYSENVIASVYAFAYG
LHKTLDCNEKNCEQKPFLDYEALKLNILANTFILPSTNLSIEFQPNGDVN
ANSYQIRMFSFEKNVLLGSWSKTNNIQINQTEFWLHYDNENQSSTNIPAT
CSTPCKPGFYKRQESQTCCWSCIQCPYDEVSLGIDSLGCQKCGPLEIANK
QQDKCVPLPNKEFSLTAQTGLIIGIISLVGFMFTLFTILVYMILWETPGV
KSTNRELSLIQLVCILLLFCFPVLNLYTHKSLCIARQVIFGSLHSLILVL
VLLKTYRLFKLFQPQFFKKHTRMFLTISAQIFFAFFLLLIETTVLAMWYT
VHQPSMILYSSKGEGGYIYHCGDHESYVLYAIIIYVILLSLASGFIAFRA
RSLPANFNEAQYIWLAMFTYCIIWCAFFPLHLSSNKLYKSTILLSMNLAS
TFSLIAILFGNKIRMLVCLPHLNNRLHFTGLAANAYIRTFSLRQSESPGK
NKKKKMRDKKRVISFSFELENNV
Run BLAST on NCBI

transcript from alignment at scaffold_21:7985..22325-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052075 ID=TCONS_00052075|Name=TCONS_00052075|organism=Clytia hemisphaerica|type=transcript|length=14341bp|location=Sequence derived from alignment at scaffold_21:7985..22325- (Clytia hemisphaerica)
GTGAACATAAAAGAAATTCAAACAAAGAATGAATTCTTACTCCAGTTTTA
CTGATGATTCCAACAACAATTGGAACGATAATGTTCGGCACCGTCGCACA
CGTGTTCGTTATCCCAATCAAAATGGCGGCATATTGGGGTGCAATATCTA
AATGGTTGACGCCAAAACCCGCCCATGCTATACCTACATGTTTAAACATA
ACATAATGTAAGACCAATTGACACTCGATACGTTTTGATTTTGATAGAAA
GATAAACTTTGAATGGACGAATTTGAAGCTTTAAAATCTCTTCAAACTAT
TCAAAAATTAAGATTAAATGTGATAAAGGTCGATGCAGTTTTAGAAAATA
CAAAATGCTTTTTGAACAAATTAAATGCCTTAATCGAAGCATTCAAAGTT
ATCTTTCCAACAAGGCATTATTATTAACAATCTTTTTTTCTCAAAAAAAG
CGTTTGTCAAAATACACTACTATTTTAAAATGGTAGATGTAGAGTTTTTT
GGGAGGGATGATAAAATTTTATTTCTTGTATACAAACTAATAAGCTTTGA
TGTAATTGAATTTATTTTCAATTTTTACCTTCCAGCCCAGCTCCGAAGAT
GAGAAGACCCGCAGAAATTTCATGGTAATAAATGTTCGGTGCAATCATGA
ACGAAAGCGCACTCAAGATGAACCCTGAAAGGAGAAGTTAAACATCAGGT
AAAAATAGTTTTTTCTTGACTTTCTTGACTTTGTACGACACGAATAGGAT
GTTGATCAAAAACTCGTATTAGATATAAAATTGGATTTCATAAAATAGAC
TCATTGAAAACTTAAAACCTTAAAACCAGCAGGGCTTTTCCCGGTTCGAA
TCCTTGCATCTTCCAATTCTTTTAGTTTCATTCATTGATAGCCAACCCAT
CTAACCATGAAAACGATCTAAAGACTGCCCTAGATTACTAGCCTATAAAC
GTAAAATATCGATTCTATCTGTCTCTGACTTACCTACACCAGTGAATACT
TTACGTAGAACTGTTGCCGAAACACCTCGCCTTCTCAAACATGAAGATAG
TTGACCAGAGACGAATGTTGAAAATCCCATCAGGAAATATATCAGGCTGG
TGTATTGACCGGACTGGGAATGACGAGAAAAAATAATTGAAAATATTTAG
TAGAGAGCAAACACTTATAGGACCCGTGACTTCTTTTATGCGACGCGACA
AAACCTGGTCCATTTCAAAGAATGAAGTTTTACCAAAAAAATAACAGATA
CATAATTTTCATCGAACCCTGCAGCGGATCAAAGGGGTGCTCAAAATTTA
TGATGGGGAGTGTTTATTCCCCCCGTCATAAATTATGAATCCCCTCAGAA
TCACCACTGGAATCAGCGCTAATCTCTGTCCATCATAAGGAGATTATGCC
GTACCTGAACGTCGGTTCAATACCAAAATAAACAGCAGAAAGAATTATGA
AGAGAGACCTAAAGTTCTCTTATAAACAGTTGTTAACTTACTTTAAAAAT
TCTATAATTTAGAGCTTCACTCAAATATTTGGGGAAGGATGTTTGAATCA
AACCGAATGCCCATCCTTCGCACGTGTGGGCCACCGCAATTGAAATGAAA
GGTAAAGAAGTGAAGATTGAAAACCATGGAAGATCATCTGAAAGCTGAAA
TGAAAAGTTGTGTTCATAGTAAAGGTAAGATTTTAGTGTCACCTTGAATT
GTGAGCTAATGAAAACGAAAGACCAAACTCGGCTTATCCCGCATGTACGG
TTTATGCCGTATATAGAAGTTCTTCATGTTTTTTAAAGTTACGTAATTTC
CACCATTATGGAAGCAAACGTTCGAATATGTAAAGGTGATCGCTTACGAA
AATCGAACGTTTTTTTCCGTCTGACGGAAAGTTTGTAACTCAGCAAATCA
TGAAAAACTCTATACCTTGTTTTCCGAACTGAGGTAACAAAAGCTAGGTT
TTTGTCGTCTTGGAACCAAATGGCGGACTTGTGTTTTAAATTCTATCAGC
AAAAAATGATTTCTGCGGTAATATTCATAGGAAGGGACTAAATCTTATAC
CACACCCCTCACTAATACGCATTTTATCGCTGTCTCTTACCTTTTGTGAA
GTGTGCTCTGATTCCAAACTTTCTAAAATCATTCTTCGTTCAACATTTGA
TATATGGTTATCGTCTTCTGGTGAATCTGATGCAAGGATCTGCCATACAA
CTACCCAAATTAATGCTAAAATACCTGAAAATGAAATAATTTATCTTTTA
CACTGGGCTTTCAGTCGTATCCATTTATTTGGAGTGAAAGAAACGTTACT
AAACTTCAAAACGTTCCTGGAAAATCCTTAAAAATTTCCATATACGTGGA
AACAAAACATATACCAATATAGTTGAACTCGCTACTTCAATTTCAATTTT
CCATTATCTTTCTGGTTTGGTAAAAAAAATATGTTCTGTTTTCCCCGATG
CAGGCTTCCCAAAGTGCAAGGGTCGAAATGTGAGAACGTGCACTGTAGGG
GTGTAATATGAAAATTTTGGAAAATCTGACTATTTTCTGAAGTAAAATAC
ACCATAAGGGTCCATTTTTCGACCAACTTACTCAGTTTTGGCTAAATTTT
CTCTGCACTGTAAAGATTCAATCTTGAATAAGTTTTTTCAGTGCATACGG
TAGTTTTAAGATCGGGTGCACCCCCAGGTTCAATTTCGATTATATATGTG
TGATAATTTTACTTACCAAAGAAATAGAAGACCCAGCTCCATCCACAAAC
CTCACAGAGGTATCCAGCAAGTAGTGTTCCTGCCACCGATCCTGCATACG
ATCCTATGATTAAATAAAGATAGAACGGAAATTTTGAAGGAGCAGTCATA
AATTAGGTGATACCCTAGGCTAAAAAACTTTTTTTTTAGTTTTTGTTTGA
TGGTTGTACCTGCTAAACTAGAAACCAAAAGAAGTTCCCAATTGCCCCGA
TTGGGAAAGATCTAAAAACCTTGTTGCCTTATTGAAATTAAGGCTGTCCA
GATATAATTGGCAGTGGAAACAAGAATGCCTGTAACTTTTAATAGTGAAA
TATAATTCCAAAAACTTTTAATTTCACTGTTCAAAAAAGATAACATAACC
ACCGTTTTTAGTAAAAATTTGGAGATTTGATATTTCACAGAAAAGTGCTA
CCAAGGGGTATTTCGGGTCCCATATCTTCCGAAGGACTTTTCCGTTTGGC
TTGAAATTCAACAACCTTCTTTACCTAAGGTTAAACTACCACTAGTTTAA
AAATGAACGTTATAGCATAAAAAGAAAAAAAGCTCAATATTTGCAATCGC
AAATTTAACCGCTAAAACTCGCGAATTTTTCAACAAAAAATACATTCAAA
TATAGCGCTTTTGAATCTCTAAAACAAGCAAAAAAAAATTTTGGAATTAT
ATTTCACTATTAAAAGTTACAGGCATTCTTGTTTCCACTGTCAATTATAT
CTGGACAGACTTTAGGACTTGTTTGTTGCACAATGACTTCCCATGTGCAT
TAGTTTGAATGTAAAGTTCAAATTCTACTGAGGGGCAAACAAGGCAATTT
TTGGCATTGATAACATTTTGCTGAAGAATTCCATCCATATTTCCCTCTTA
CCTGAATGAGGTATGGTGACTAGAGCCGCCCTTTCCATGGGTGGCGCCCA
ACGNAAGAATTCCATCCATATTTCCCTCTTACCTGAATGAGGTATGGTAA
CTAGAGCCGCCCTTTCCATGGGTGGCGCCCAACGACTCCATATCGAATAC
ATTGCCGGGTAAATGCAACCCTATAATTAAAAAAGGTGCTTTATCCGCTT
TAACCGTGCCAGCATGTATTTTGATTTATTGAATTGTAAACATTCTTTGG
CGTATTTTGCTAGATAGCTAGATTGCCTCCATTTCCCTTATAACAGCTTA
TTAATTTAAAAGTTTGAAGGATATGTCAAATAAAATCAACCATTACTGTC
TTTAATAAAACATTCGATTTGTGGAAGTAATGACCGTTTCAAATTCGAAT
GTTTTCCTCTATAGGCCATTTCACAGTCGCAAAGCGTAATGGGTAATCAG
GACCACTGCGTGCTAATGACGACTTACTATTGGTCCAGAGTTTTGAAATT
TTTTGAAGATTATTGCGTCTAGCCAACAGAAAGCCGTTACGGAGGCGCAA
TCAGTCCTGATTACCCATGATCCATTTCGACTGTGAAATAGCCTATAGTG
TCTGATTTTTGTTAAATTACGCAATTTCCCAACACTTTTCACACCTCGTC
ATTTTTGACCAATAAAGCTCTCCTTACCTCACAAAGTCCTTCGACTAGCC
GCAACACAAATAACAGNAGATTGCCTCCATTTCCCTTATAACAGCTTATT
AATTTACAAGTTTGAAGGATATGTCAAATAAAATCAACCATTGCTGTCTC
TAATAAAACATTCTGATTTTTGTTAAATTACGCAATTTCCCAACATTTTT
CACACCTCGTCATTTTTAACCAATAAAGCTCTCCTTACCTCACAAAGTCC
TTCGACGAGCCGCAACACAAACAATAACACCCAGTGCTCTTTCGCCGCCA
GCGGTGTCAGGAGCGTCAAAAAGCCACTAATCAAGATGGCGAATCCGAAC
AAATTTTTCCCGCCAAAACGGGCGGCTATATAACCACCAGGAATTTGTGT
GATGATGTAACCATAATAAAATGCTGCTAATAAATGACCTGAAATTGGAT
TGTATACAGATATACAAACGGCGCCGAAATATATTGGGTATTTTAATGCT
TTTCAGAATTTAAAGATAGGGCGAGAATTGCAGTTTCAGTACTTCCGCTT
TGTTTCATTGAATTTTTTCATTTGGGAGGGGTTAAGTTGCTTCCAGGCTA
TATTTTCAGCCTTATTGGAACATTTTTGAGCTTTTAGATCCTGAGATCCT
ATGGTCCTGAGATCCTATGGTCCTAAGTCTTAACTCTCATGTTAAAACTC
TACTTTCCAACCGTATTTTAAATGTTTTAAAGCACTTAAAAATCACTTGC
GGTTTTCAAATTTGAGTGAATTCACCTTTAGTGCCAAATATTACGGTTGG
GATTGTAGTTTTTAATTATTTCCGTGGACACTTCTAGAATTCCGTGGACT
TACATCCTGAGTAGTAGGCCTGTATCTCTTATAAGAATTTTTTATGTAGG
CTAAGCAGAAGTGTTTCCGCCTAACAGAAAAGATTCATGGGCTTTACCTT
GAAGTTCTCTGTTCCATTGAAATTCAGCCAACGCCTAAAAAGTAATAAAG
GTGATAATAAAAACACTCAAAACTCATTGTTTTTTTTATTGTATGGCCTC
TAGAATTTTACCTACACATAACCCGATATTTTTATCGTTATCAAATAAAT
GGGCGTTTGTAAGTTTGTCACTGAAAACATTTAATCAAGTCACAGAAAAA
TATTAGACTGTACTCCAACTTACCGTATATTCCGTCCCATCAGCCCTCAC
TCGTGTATGATTTGATGTCATGGCAACCAGCGTCACACTCAAATCAACAC
GTAAACAATAAACATTGAAAAACCCAAAGAAACTCAACAAAGCCAACACA
TAACGTTTTGGTAAGCATTTGCAAGTCCTCGATTGAAATCGAAAATCATC
ATTCGTTTCGAGACAGTCTTCGATGGAGGGCGGTTGTTCTAAATAACTCC
TCGTCCCGCCCTCACTGTAACTTATACTCAATTTTACTCGAGCAGTATTC
TTCTTCCCGTATAAATGTAAAATATCACTAGCCGTAGATCCACCATCCTC
AAAAGAGTTCTGATGGTATAGAGGCTGTTTTTTAGACCCATTTGCAGTCA
CTCTTTTATCAACTTCCAGATTATCTGATAGTGGCATAGGAGTTTCAGCT
TCTATGTTGTGAGCCTTCTGATGATATAGCGTCTTCTGTTGTTCATTTTG
TTCTTCGCTCATCTTGCTCATACAATGTGGAAACTTCTCAAGTTCTACGT
ATCCTCAATAATATCTCTGATTTACCATGTCTATTTATTAAACAGTAGAA
GTTTATTGTATGGTTGTTATTCGGGCTGTTGTTTGATTTAGAATCCTTGA
TAAAAATTTTATCCACTGAGATTGGATGAAAATTTACAATCTAATAATAA
TAACCCCAAAATACACCAATAATATCTGTNTTTATCCACTGAGATTGGAT
AAAAATTTAAAATCTAATAATAATAACCCCAAAATACACCAATGATTTCT
GAATCTCCAACAATTAAAAATCACATCACAATCCTAACCTTTATTTGTAT
AGCGGCATTTCCATGATGCCTGCAGAGCATGCAGATTTCTATCATGCTGA
AAATGAGTAAAAAATGGAATGTTCGAAAAAGTCTTGTTTTTCTTTCGAAT
GTCTGGATCGTGAACTCATTTTCTGAATTTTTCATTTTATAAATCTGTTA
TTTTTATAGCGGCTGCCTTCATCAAATCTCAAATAAAACAAACAAATTAT
ATGCATGCAAAATATCTAGGTTTTTATCTGTAGGAAATATAAAATCTTTT
AACATCCCTAACTAAATCTCCCTTCCCGAAATATCACTGCAGTGAATTTG
GTCCTACCCGAATCTAGGTAATCTGACTACTGGCATTTGCCAAAGTTGAC
GGTCCCCTTATATTCTAAATTAACTTTTGTACAGCGCATTTATTTACTAA
AATAGATAAGAACAAACTATATAAGAACATAAGGCCTCGAGTTGAGAACA
TTGTAAAACTTTACGGACTCTAGAACACCGAATTTTACAGGAAAATGGGT
AAAAATACTCAAAAAATGGCAAAAATAAGAACATGTTAAGAACATTTTTT
GGCTTGAATTTCAAAAAATTACAAAAACATCCCAAGGCTTCAAATATTTT
GGATGTTCTTATAAAAAACGTGTACTGGTATCATTGGTGATCCTCGGGAT
GATTTGTTATGTGAGATTACAAACACCTCCACTTTCATCTCCACATGTTA
AGATTGCGCCAAACACAGCAGAAAAGAACAGGACAGCAACAGGAACAGCG
TTATTAAATCCAGAAAAATACTGGAACATTTCTGGAGCAAAAATAACGTA
CGGAAACTCAATATGAATCGATATTCCCATATGCTTTTTATGGCTGGGGA
TTTGAATTCCATCAATCAATCAGAAAATTCAGCGAGGATAGGAAAAATAG
CATTACATTTTGCAGTGAGAATTGGTTTTCTTGATTATTATCAGGGGGGA
CAAAAATCTGATTTTTCCAATGGGAATGATATTTTTGCCACTGGTTCTGT
GAGAATAGGGAATTAGTCAATCTTTTAGAAAATTTTGGGAGATTATAATT
TTCATCAAATATGAAATAAATTTTCTCGACCCACAAACATTTCATTTCAT
TTCTAGAACAAAGCAATCAGTTCACTACTGTCTCTTATTATAATTTTAAA
TATTTGTATTTTCGAAACGGGATGAAAGACTTCTGGAATAGGAGGAGCAT
TTCAGACTTCGGATGAAAAGATGGTCAAACTGAAGATATTTTACTTAATA
AAACAAGGTTTATGAATTCACACTTAACTATATGATTATATTGCCTACTA
TACCTTTAAGAAAGTAATTTCGGTGAAAATTGGCAAAATGAAGCTTCTCA
AACAAACATTTGAGATTAATTTAAAAAAATATATACGAAGAAACTTTAGC
AGTTTTGCCTTGAACTTGAAATTCGTCAAAATTAGGTAAAATTATAACAA
ATGCAAAGTGTAGTAATAAGACTTGTTTGGAACTTTTTATAACTTTTACT
GAGCTTTGACCTGGCTGGGTTTATAATGAAACATTTGTTAGAGTTGTTTT
GAAAGTTATCCGAGTTTGATTTGTGTACTTTAATAATGTTAGTTGATAAA
TGTGAACTGACAGATGTAATGGGAAAATCAGATGTGCTGAGAAAAAACAT
ATGTAAAAGCAGCTCAAATTTCGGAAGAAATGTATTAGGAATTTATTTAA
AACTTACAATATTTTTCTTAGGAATTTTATTAATTGAAATTATCTATTTG
ACTGGCTGAAAATACTGGTATAGGTCTTCGAGGGTGTGGATTGATAAAAT
TGATCAAGAAGTGCCCTTATACTTTTTTACCAATGTAGTTTTTGAATAAA
TTCCTTAAATATTGCATTTTTGGAGAGTTTTTAAATGTTTTTTCAATTCA
TTATGAATTATTCTTAACTTTTTGAGGAAAATCATCCTAAAATATTCTTA
CGGTACACGTTTTTTTTTTATAAGGAACCTTAACTTTGCTCTGAGCCTGG
AGTTCCTTATGTTTACAGAGAAATTCAGCCTCAAAGTTCCTTATNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTATCCTCAGCCTGGGCAGTTCCTTAA
CAATTCCTTATTTTTTGGACCATTTTCAGCCTCGAGTTCCTTATAAACGT
GTTCCTTATATAAAAAAAACGTGTATTCTTAGGTTTGGATCCAATACCAG
CCGAAACCTGTAAGCATGTAATACTCCTACTTCAAGCAAAAAATTGGCAT
TTTTGTTGAACCTTTTAGCATTTCTTGATAATAATTGGCAATTTAACGGT
AAAATGCTCTAAAAATGACATTCTAAGGGTTTAATTGCCAATTTCCATGG
TGGTAGTATTCTTACCACATTCTCAATTATTTGGCCAATCCATCACAAAT
ATTCTTGTAAAGTATGTTCTTATAAAAAAAGTGTGTACAGTTTGTTTTCA
AAAAATGGGCACAAGAGCATAGCGTAGCCGAGGTGTGAATACTGTTTCAT
GCAAAATGTACTTCTCAAGGTATTAGATCATATGCCAAAAGGAATAATGC
AAGTGTTAGCAGACATATATGGTCAAGATGTTATACAGTAAGATTTGTTA
ACTTATCAAATGACGATTTATTTTATGCAATCAAAGCGATATTACAAGAT
GACCATTTTAAAATAAACATTGGAAGATGACACATGTGTAAACATCCTTG
TATGCAAGCAAGCAAGCTTAGAGCGTATGGTACCCTCAACAAAATGTAAT
ACAGCTTAGTTAGTTTGTGTTATGCTATGGTTTTGACTTGTAGATTTTAT
TATGGCACTATTTTTAAATGGATCCATTCTCCGCTTTTTTAGATACGATG
AATATTGAAGGAACACATTTCTCTCTCATACATTCCCGTCTTATATACCG
GGTAGGAAAATTGGCTAAATAAATTTCACCGATGAATCGAATACCCTGAA
TTTTTATCTATTGATAAATCCACTGAACGAAAGTTCTGAACGAAAGTTCA
GTGGGACACCCTTAATAATGTTTCTAATCAAAATAAAAGCACGTAAAACT
AGACAAGGTCACCCTAAAAAATTGGAAAGATCGGATTCAACAAACGCGTT
TATGTCGCCAAGCTCAGGACTAGGTCTTTAATGGTCCTTAGCATCTTGAG
AAGATTGTATTGATGTATGCAACGGAAATTGATCATCTTATCGTTCGAAA
CTCGAAAAGTTCTACTGTTCATCTAGCCGATTATATCGTCTTCGCAAGAT
CACTAAAAAAGGGATGAATTCGAAAACGGTGGTTAACTCGGGGCGGAGTA
AGCAGTGGTGTAAACCGCCCTGACGCCCTGACTCTGCGCATATATATTTT
CCCGCGTTTACTGACCCTCTCTAACGGACGATAGCATCGTCTACTGTTCA
TCGTGTGTTTCCTCTTTATATCCGTCATGATTTCATGATTAATTCACTGA
ACTGAAAAGACACGGAACAGATCAGATTACAAAAATCCAGTCATGACAAC
ACATAAACCATACTGCTAAGTTAAGGGTTATGTCACTTTTCCGTTCCTTT
GCTTGGCAAGGAGTATAGAACAACTATCTAATTTCTTGATACTGCTTTTT
TTGAATACCTTTTTCTTACATTGGATGCTCCTGAAATGAATTTTCTTTTT
CCAATTAACCATTTGAGGACAGTGACCTACCTAATGTGCAGCCCTTTATT
TTAAGGTTCTAAAATTGTGCTGTAATAATAAAAGACGGAATTGAAATTGC
ATGAAATATTAAGGTTAGGCAAAAGGATAATTTTGGACCGAAAAAAGGGA
CAGTTATAGTCACTGTAAGTGATCTGTTTTGGGTTTTAGATATTGTTATT
TCAAGCTCGAAACCCCGGAAAGCCATTTCACGTCAACTGTGTATCAATTT
TTGACACTTTCTTACAATTTTGTGATTGTGACGTCGACACATTTCTTTAT
TTGGAAAATACATAACGACGTGACGGAATATGAGATTCTTGAGAATTTTT
TTCCTTCATTTCGTCACTGAGCGACGATTTTATAAGATAACCAAACAAAA
AATATTTCCCTACAATAACAAACCACTTTATGTTATAAACAGAATATCAA
AGGATCAAGAATATCAAGTGGAATCCTCTCTAATATAGTTTTTTTAAGTC
AAAAGTGTTGAAACGTAACGGGTTCAATGATTTTCCAATATATTTGGAAT
TGGGATTTTTAAATTTAGTGTAAAGTTAAGCGTCTTAGGCTTAAATTAGG
ATCAATTAAATCTAACTATGTTTTGAAATTCATTCAGTCGTTTTGATCCT
TAATAACCAAGGTCTTGTTACTTCCGATTTCTCCTTTGAGTGCTCAAAAA
CTATAGACCAACAGTGCTGGTTTTCTAAGGTTATAGTAGTATTCTAAACT
TGGGAATAAAATATATTTATGATGGACCAGCTATAATTGATTTCCAGGTA
TATTTCGATTTTTCGTTATCATTTTCAGGAGCAACTGCTATATATAATGC
GAAAATGTTTGGCTATAATCCTCAGTGGATTGATAGTATTACAGAATCTT
CTAACAGTTTCCTCGCAATCATGCAATGGTGAATCTATCCAAGACCTGAA
TGCAACGTATATCATTGGAGGTTTGTTTCCCGTTCATTATCGTGTTTCGG
AAACAAATCAATATATATTCAACATTCTATCTATTGTATGGGTCGAAGCG
TTTTTGTTCGCTTTACGTGAAATCAACAATATCAAAGATCTGCTACCAGG
TATTAAGCTAGGATACGATATCAAAGACACGTGTAATGATGGTATGGTTG
CTGAAAATCATGTCCTTGACCTGATGACAGATCGTAAATTCTTTCAATCA
TCACATCAAGCGTTTAGTAATTGGTACGCCCCATGTGAATGTTACGATGA
GCAACAGTCAAAGATGATTGGAGTTGTTGGTAAGATATTGTTCATATTTC
TTGAAGTAACTTTTTAATATCTAATTTGATTTTGGCAAGGAAGAATTGTC
TTAAGCGTTATTTTACTTTGGAAACTGAAAAATGAAAATGTTGACTATCC
GTAATTTGAACTCGAACAGGGAATTTTATATGTTCGAATTACAGAGAGAT
TCGAATTATAGAGAGTATTTTAAGAGGGTTTCTCCCTGACGGGAACTGGA
AATAGGTTCGAATTATAGAGAGATTCGAAAAAAAATATAATAGAAGCTCA
AATAAGCAAAATTGACTGTACTTTTAAATGAATTTTGCTTCGATCTTTTA
AAAAACCTGTAGTATATTTCCTGCATTAAATTACTTTTGCAGGTGGTGCA
TCATCAACGATCTCGTCCATCGCTGCCCATACCCTAATTGCTGGCAACAT
ACCACAGATATCCTATGCCTCCACCAGTCCATTGCTATCCAACTCCAGGA
CGTATCCCAACTTCTTGAGGACCATACCCTCAGATTTACAACAAGTATCA
GTGGTAACTGAGCTTCTCCAAGTCATGGATTGGACTTACGTTTCTTTGTT
AGCCACTGATGATGATTTTGGGAGACTTGCTTTAAATCTTGTCCAAGAGA
ACTTCAAACAGAACAATATTTGTATCGCGTTAGAATATCTGTATAGTTCC
AATCTTTCCACTGGAGATTTAGCTGAGATCACTAGAGGATTGTCTAAATA
CCAGAATAGAACCAAAGTTGTTATCATATGGGCAACGGAGTTTTGGAATG
TCGAAAAGATCATCACTAATACATCTAATGATGGCCTGGACGATATGTTA
TGGATAGTTTTAAGCGAAAGTTGGATAACGAAGTTCCAATCAAATCTTCC
TAGACGTCAGCATGTTATAATGTTGCAATTAGAAGATTTTCAAGTAGAGA
GTTTTGTAGATCATATGAATAAACTATCATTTGGATCAGACCTTGGCAAT
ATATGGATGCCACAATATTGGACAAGTCTTGGAATATGTCCTGAGAATGA
GGGTGAGAGAACAAAATATTGTTACGATCATTGGATTCCCGAAGGTCGAG
TTTTAGGTCGAAAATACAGTGAAAACGTAATAGCGTCTGTTTACGCGTTT
GCATACGGTCTTCATAAGACATTGGATTGTAATGAAAAGAACTGCGAACA
GAAACCATTTCTTGACTATGAAGCATTGAAATTGAACATCTTGGCAAATA
CATTTATACTACCGTCGACGAATTTGAGTATTGAATTTCAACCTAATGGA
GACGTCAATGCAAACTCGTATCAAATCCGAATGTTCTCATTTGAAAAAAA
TGTTCTCCTTGGCTCTTGGTCTAAAACTAACAATATTCAAATCAATCAAA
CTGAATTCTGGCTTCATTATGATAATGAAAACCAATCTTCAACCAACATA
CCAGCTACTTGCTCAACGCCTTGTAAACCTGGTTTCTATAAAAGACAAGA
ATCACAAACATGTTGTTGGAGTTGTATACAATGTCCATACGATGAAGTCA
GCTTAGGTATTGATTCGCTTGGCTGTCAAAAATGCGGACCACTGGAAATC
GCCAATAAACAACAAGACAAATGCGTACCATTACCAAATAAAGAATTCTC
ACTGACTGCACAAACCGGATTAATAATTGGGATTATTTCTCTTGTCGGAT
TCATGTTCACATTATTTACGATTCTGGTATACATGATATTATGGGAAACG
CCAGGTGTCAAATCCACAAATCGTGAATTATCTTTAATACAGCTGGTCTG
TATTTTATTACTGTTCTGCTTTCCGGTCCTGAATTTATACACGCACAAGT
CACTCTGCATTGCACGGCAAGTGATATTCGGCAGTCTTCATTCGTTAATT
CTGGTCCTTGTTTTATTAAAAACTTATAGACTATTTAAACTGTTTCAACC
ACAATTCTTTAAGAAACACACACGTATGTTTCTAACTATTTCAGCACAAA
TTTTCTTCGCTTTTTTTCTATTACTCATTGAAACAACAGTCCTGGCTATG
TGGTATACAGTACATCAACCAAGTATGATTTTATACAGTAGTAAAGGAGA
AGGTGGTTATATTTACCATTGTGGCGATCACGAGAGTTACGTTTTATACG
CTATTATCATTTACGTCATTTTACTGTCCTTGGCTAGTGGGTTTATAGCA
TTTCGAGCACGTAGCTTACCAGCCAATTTCAACGAAGCGCAATACATTTG
GCTGGCTATGTTCACTTATTGTATTATTTGGTGTGCTTTCTTTCCACTCC
ATTTGAGTTCGAATAAACTTTACAAATCGACTATATTATTATCGATGAAC
TTAGCAAGTACTTTTAGTTTGATTGCCATTTTGTTTGGTAATAAGATTCG
AATGTTGGTATGCTTGCCGCACTTGAACAATAGGTTGCATTTCACCGGGT
TGGCCGCTAATGCTTACATTCGAACGTTCTCGTTACGTCAGAGTGAGTCA
CCGGGAAAGAACAAGAAGAAGAAGATGAGGGATAAGAAACGTGTGATCAG
TTTTAGTTTTGAACTGGAAAATAATGTTTAATTTTTAATTGTGATGATAT
TTCCTATTTTAGACCAAACCTTGTAAAACATTAACCCAAATGAAACTTCT
TGTTTTTTTCCAATAAAATTTTTGAATTTTTGACTCAACCCGCTCGTTGT
TCTTATTTTCTTCAAAATTTGCCAGGTTTAACCATAGGAATAGTCCTACT
AGGGGGAGCTGTTTTTGTTCGGGGGTCGCAAACTAATTTTAATAGCCCCT
GAAATAATAGAGCATTTGGCATGTAAATTCCTAACTTTTAT

Coding sequence (CDS) from alignment at scaffold_21:7985..22325-

>TCONS_00052075 ID=TCONS_00052075|Name=TCONS_00052075|organism=Clytia hemisphaerica|type=CDS|length=5244bp|location=Sequence derived from alignment at scaffold_21:7985..22325- (Clytia hemisphaerica)
GTGGTGCATCATCAACGATCTCGTCCATCGCTGCCCATACCCTAATTGCT
GGCAACATACCACAGATATCCTATGCCTCCACCAGTCCATTGCTATCCAA
CTCCAGGACGTATCCCAACTTCTTGAGGACCATACCCTCAGATTTACAAC
AAGTATCAGTGGTAACTGAGCTTCTCCAAGTCATGGATTGGACTTACGTT
TCTTTGTTAGCCACTGATGATGATTTTGGGAGACTTGCTTTAAATCTTGT
CCAAGAGAACTTCAAACAGAACAATATTTGTATCGCGTTAGAATATCTGT
ATAGTTCCAATCTTTCCACTGGAGATTTAGCTGAGATCACTAGAGGATTG
TCTAAATACCAGAATAGAACCAAAGTTGTTATCATATGGGCAACGGAGTT
TTGGAATGTCGAAAAGATCATCACTAATACATCTAATGATGGCCTGGACG
ATATGTTATGGATAGTTTTAAGCGAAAGTTGGATAACGAAGTTCCAATCA
AATCTTCCTAGACGTCAGCATGTTATAATGTTGCAATTAGAAGATTTTCA
AGTAGAGAGTTTTGTAGATCATATGAATAAACTATCATTTGGATCAGACC
TTGGCAATATATGGATGCCACAATATTGGACAAGTCTTGGAATATGTCCT
GAGAATGAGGGTGAGAGAACAAAATATTGTTACGATCATTGGATTCCCGA
AGGTCGAGTTTTAGGTCGAAAATACAGTGAAAACGTAATAGCGTCTGTTT
ACGCGTTTGCATACGGTCTTCATAAGACATTGGATTGTAATGAAAAGAAC
TGCGAACAGAAACCATTTCTTGACTATGAAGCATTGAAATTGAACATCTT
GGCAAATACATTTATACTACCGTCGACGAATTTGAGTATTGAATTTCAAC
CTAATGGAGACGTCAATGCAAACTCGTATCAAATCCGAATGTTCTCATTT
GAAAAAAATGTTCTCCTTGGCTCTTGGTCTAAAACTAACAATATTCAAAT
CAATCAAACTGAATTCTGGCTTCATTATGATAATGAAAACCAATCTTCAA
CCAACATACCAGCTACTTGCTCAACGCCTTGTAAACCTGGTTTCTATAAA
AGACAAGAATCACAAACATGTTGTTGGAGTTGTATACAATGTCCATACGA
TGAAGTCAGCTTAGGTATTGATTCGCTTGGCTGTCAAAAATGCGGACCAC
TGGAAATCGCCAATAAACAACAAGACAAATGCGTACCATTACCAAATAAA
GAATTCTCACTGACTGCACAAACCGGATTAATAATTGGGATTATTTCTCT
TGTCGGATTCATGTTCACATTATTTACGATTCTGGTATACATGATATTAT
GGGAAACGCCAGGTGTCAAATCCACAAATCGTGAATTATCTTTAATACAG
CTGGTCTGTATTTTATTACTGTTCTGCTTTCCGGTCCTGAATTTATACAC
GCACAAGTCACTCTGCATTGCACGGCAAGTGATATTCGGCAGTCTTCATT
CGTTAATTCTGGTCCTTGTTTTATTAAAAACTTATAGACTATTTAAACTG
TTTCAACCACAATTCTTTAAGAAACACACACGTATGTTTCTAACTATTTC
AGCACAAATTTTCTTCGCTTTTTTTCTATTACTCATTGAAACAACAGTCC
TGGCTATGTGGTATACAGTACATCAACCAAGTATGATTTTATACAGTAGT
AAAGGAGAAGGTGGTTATATTTACCATTGTGGCGATCACGAGAGTTACGT
TTTATACGCTATTATCATTTACGTCATTTTACTGTCCTTGGCTAGTGGGT
TTATAGCATTTCGAGCACGTAGCTTACCAGCCAATTTCAACGAAGCGCAA
TACATTTGGCTGGCTATGTTCACTTATTGTATTATTTGGTGTGCTTTCTT
TCCACTCCATTTGAGTTCGAATAAACTTTACAAATCGACTATATTATTAT
CGATGAACTTAGCAAGTACTTTTAGTTTGATTGCCATTTTGTTTGGTAAT
AAGATTCGAATGTTGGTATGCTTGCCGCACTTGAACAATAGGTTGCATTT
CACCGGGTTGGCCGCTAATGCTTACATTCGAACGTTCTCGTTACGTCAGA
GTGAGTCACCGGGAAAGAACAAGAAGAAGAAGATGAGGGATAAGAAACGT
GTGATCAGTTTTAGTTTTGAACTGGAAAATAATGTTTAAATGCGAAAATG
TTTGGCTATAATCCTCAGTGGATTGATAGTATTACAGAATCTTCTAACAG
TTTCCTCGCAATCATGCAATGGTGAATCTATCCAAGACCTGAATGCAACG
TATATCATTGGAGGTTTGTTTCCCGTTCATTATCGTGTTTCGGAAACAAA
TCAATATATATTCAACATTCTATCTATTGTATGGGTCGAAGCGTTTTTGT
TCGCTTTACGTGAAATCAACAATATCAAAGATCTGCTACCAGGTATTAAG
CTAGGATACGATATCAAAGACACGTGTAATGATGGTATGGTTGCTGAAAA
TCATGTCCTTGACCTGATGACAGATCGTAAATTCTTTCAATCATCACATC
AAGCGTTTAGTAATTGGTACGCCCCATGTGAATGTTACGATGAGCAACAG
TCAAAGATGATTGGAGTTGTTGGTGGTGCATCATCAACGATCTCGTCCAT
CGCTGCCCATACCCTAATTGCTGGCAACATACCACAGATATCCTATGCCT
CCACCAGTCCATTGCTATCCAACTCCAGGACGTATCCCAACTTCTTGAGG
ACCATACCCTCAGATTTACAACAAGTATCAGTGGTAACTGAGCTTCTCCA
AGTCATGGATTGGACTTACGTTTCTTTGTTAGCCACTGATGATGATTTTG
GGAGACTTGCTTTAAATCTTGTCCAAGAGAACTTCAAACAGAACAATATT
TGTATCGCGTTAGAATATCTGTATAGTTCCAATCTTTCCACTGGAGATTT
AGCTGAGATCACTAGAGGATTGTCTAAATACCAGAATAGAACCAAAGTTG
TTATCATATGGGCAACGGAGTTTTGGAATGTCGAAAAGATCATCACTAAT
ACATCTAATGATGGCCTGGACGATATGTTATGGATAGTTTTAAGCGAAAG
TTGGATAACGAAGTTCCAATCAAATCTTCCTAGACGTCAGCATGTTATAA
TGTTGCAATTAGAAGATTTTCAAGTAGAGAGTTTTGTAGATCATATGAAT
AAACTATCATTTGGATCAGACCTTGGCAATATATGGATGCCACAATATTG
GACAAGTCTTGGAATATGTCCTGAGAATGAGGGTGAGAGAACAAAATATT
GTTACGATCATTGGATTCCCGAAGGTCGAGTTTTAGGTCGAAAATACAGT
GAAAACGTAATAGCGTCTGTTTACGCGTTTGCATACGGTCTTCATAAGAC
ATTGGATTGTAATGAAAAGAACTGCGAACAGAAACCATTTCTTGACTATG
AAGCATTGAAATTGAACATCTTGGCAAATACATTTATACTACCGTCGACG
AATTTGAGTATTGAATTTCAACCTAATGGAGACGTCAATGCAAACTCGTA
TCAAATCCGAATGTTCTCATTTGAAAAAAATGTTCTCCTTGGCTCTTGGT
CTAAAACTAACAATATTCAAATCAATCAAACTGAATTCTGGCTTCATTAT
GATAATGAAAACCAATCTTCAACCAACATACCAGCTACTTGCTCAACGCC
TTGTAAACCTGGTTTCTATAAAAGACAAGAATCACAAACATGTTGTTGGA
GTTGTATACAATGTCCATACGATGAAGTCAGCTTAGGTATTGATTCGCTT
GGCTGTCAAAAATGCGGACCACTGGAAATCGCCAATAAACAACAAGACAA
ATGCGTACCATTACCAAATAAAGAATTCTCACTGACTGCACAAACCGGAT
TAATAATTGGGATTATTTCTCTTGTCGGATTCATGTTCACATTATTTACG
ATTCTGGTATACATGATATTATGGGAAACGCCAGGTGTCAAATCCACAAA
TCGTGAATTATCTTTAATACAGCTGGTCTGTATTTTATTACTGTTCTGCT
TTCCGGTCCTGAATTTATACACGCACAAGTCACTCTGCATTGCACGGCAA
GTGATATTCGGCAGTCTTCATTCGTTAATTCTGGTCCTTGTTTTATTAAA
AACTTATAGACTATTTAAACTGTTTCAACCACAATTCTTTAAGAAACACA
CACGTATGTTTCTAACTATTTCAGCACAAATTTTCTTCGCTTTTTTTCTA
TTACTCATTGAAACAACAGTCCTGGCTATGTGGTATACAGTACATCAACC
AAGTATGATTTTATACAGTAGTAAAGGAGAAGGTGGTTATATTTACCATT
GTGGCGATCACGAGAGTTACGTTTTATACGCTATTATCATTTACGTCATT
TTACTGTCCTTGGCTAGTGGGTTTATAGCATTTCGAGCACGTAGCTTACC
AGCCAATTTCAACGAAGCGCAATACATTTGGCTGGCTATGTTCACTTATT
GTATTATTTGGTGTGCTTTCTTTCCACTCCATTTGAGTTCGAATAAACTT
TACAAATCGACTATATTATTATCGATGAACTTAGCAAGTACTTTTAGTTT
GATTGCCATTTTGTTTGGTAATAAGATTCGAATGTTGGTATGCTTGCCGC
ACTTGAACAATAGGTTGCATTTCACCGGGTTGGCCGCTAATGCTTACATT
CGAACGTTCTCGTTACGTCAGAGTGAGTCACCGGGAAAGAACAAGAAGAA
GAAGATGAGGGATAAGAAACGTGTGATCAGTTTTAGTTTTGAACTGGAAA
ATAATGTTTAAATGCGAAAATGTTTGGCTATAATCCTCAGTGGATTGATA
GTATTACAGAATCTTCTAACAGTTTCCTCGCAATCATGCAATGGTGAATC
TATCCAAGACCTGAATGCAACGTATATCATTGGAGGTTTGTTTCCCGTTC
ATTATCGTGTTTCGGAAACAAATCAATATATATTCAACATTCTATCTATT
GTATGGGTCGAAGCGTTTTTGTTCGCTTTACGTGAAATCAACAATATCAA
AGATCTGCTACCAGGTATTAAGCTAGGATACGATATCAAAGACACGTGTA
ATGATGGTATGGTTGCTGAAAATCATGTCCTTGACCTGATGACAGATCGT
AAATTCTTTCAATCATCACATCAAGCGTTTAGTAATTGGTACGCCCCATG
TGAATGTTACGATGAGCAACAGTCAAAGATGATTGGAGTTGTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032982XLOC_032982Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052075-proteinTCONS_00052075-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052075-exon-scaffold_21-1575043694:22119..22325TCONS_00052075-exon-scaffold_21-1575043694:22119..22325Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1575043694:21628..21740TCONS_00052075-exon-scaffold_21-1575043694:21628..21740Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1575043694:20652..20813TCONS_00052075-exon-scaffold_21-1575043694:20652..20813Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1575043694:10797..11247TCONS_00052075-exon-scaffold_21-1575043694:10797..11247Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1575043694:7985..10433TCONS_00052075-exon-scaffold_21-1575043694:7985..10433Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1510915933:22119..22325TCONS_00052075-exon-scaffold_21-1510915933:22119..22325Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1510915933:21628..21740TCONS_00052075-exon-scaffold_21-1510915933:21628..21740Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1510915933:20652..20813TCONS_00052075-exon-scaffold_21-1510915933:20652..20813Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1510915933:10797..11247TCONS_00052075-exon-scaffold_21-1510915933:10797..11247Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1510915933:7985..10433TCONS_00052075-exon-scaffold_21-1510915933:7985..10433Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1491911889:22119..22325TCONS_00052075-exon-scaffold_21-1491911889:22119..22325Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1491911889:21628..21740TCONS_00052075-exon-scaffold_21-1491911889:21628..21740Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1491911889:20652..20813TCONS_00052075-exon-scaffold_21-1491911889:20652..20813Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1491911889:10797..11247TCONS_00052075-exon-scaffold_21-1491911889:10797..11247Clytia hemisphaericaexon
TCONS_00052075-exon-scaffold_21-1491911889:7985..10433TCONS_00052075-exon-scaffold_21-1491911889:7985..10433Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_21supercontigscaffold_21:7985..22325 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.160668	0.159945	0.101279	0.12494	1.65573	1.82998	1.88124	1.83583	0.948431	2.81917	1.55488	1.57517	3.29454	2.85128	13.5544	6.10317	2.56359	4.39228	5.07523	8.27102	0.454992	0.494692	0.769204	0.70334	2.29256	1.9612	1.07321	1.16172	43.3115	33.5695
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000337GPCR_3
IPR011500GPCR_3_9-Cys_dom
IPR017978GPCR_3_C
IPR001828ANF_lig-bd_rcpt
IPR028082Peripla_BP_I
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
Vocabulary: Molecular Function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007186 G-protein coupled receptor signaling pathway
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004930 G-protein coupled receptor activity
Blast
[Close]
BLAST of TCONS_00052075 vs. Swiss-Prot (Human)
Match: CASR (Extracellular calcium-sensing receptor OS=Homo sapiens GN=CASR PE=1 SV=3)

HSP 1 Score: 228.409 bits (581), Expect = 2.838e-61
Identity = 223/878 (25.40%), Postives = 381/878 (43.39%), Query Frame = 3 
Query:  615 IIGGLFPVHYRVSETNQYI-----------FNILSIVWVEAFLFALREINNIKDLLPGIKLGYDIKDTCNDGMVAENHVLDLMTDRKFFQSSHQAFSNWYAPCECYDEQQSKMXXXXXXXXXXXXXXXXHTLIAGNIPQISYASTSPLLSNSRTYPNFLRTIPSDLQQVSVVTELLQVMDWTYVSLLATDDDFGRLALNLVQENFKQNNICIALEYLYSSNLSTGDLAEITRGLSKYQNRTKVVIIWATEFWNVEKIITNTSNDGLDDMLWIVLSESWITKFQSNLPRRQHV----IMLQLEDFQVESFVDHMNKLSFGSDLGNIWMPQYWTSLGICPENEGERTKYCYDHWIPEGRVLGRKYSENVIASVYAFAYGLHKTLDCNEKNCE--QKPFLDYEALKL--NILANTF-----------ILPSTNLSIEFQPNGDVNANSYQI----RMFSFEKNV-----------LLGSWSKTN--------NIQINQTEFWLHYDNENQS-------------STNIP-ATCSTPCKPGFYKR--QESQTCCWSCIQCPYDEVSLGIDSLGCQKCGPLEIANKQQDKCVPLPNKEFSLTAQTGLIIGIISLVGFMFTLFTILVYMILWETPGVKSTNREXXXXXXXXXXXXXXXPVLNLYTHKS-LCIARQVIFGXXXXXXXXXXXXKTYRXXXXXXXXXXXXHTRMFLTISAQIXXXXXXXXIETTVLAMWYTVHQPSMILYSSKGEGGYIYHCGDHEXXXXXXXXXXXXXXXXXXGFIAFRARSLPANFNEAQYIWLAMFTYCIIWCAFFPLHLSSNKLYKSTILLSMNLASTFSLIAILFGNKIRMLVCLPHLN--------NRLHFTGLAANAYIR 3014
            I+GGLFP+H+ V+  +Q +           +N     W++A +FA+ EIN+   LLP + LGY I DTCN    A    L  +   K    +   F      C C +   S +  V    S   +++A + L    IPQ+SYAS+S LLSN   + +FLRTIP+D  Q + + ++++   W +V  +A DDD+GR  +   +E  ++ +ICI    L S      D  EI   +   QN T  VI+  +   ++E +I       +   +W+  SE+W +     +P+  HV    I   L+  Q+  F + + K+     + N +  ++W     C   EG +     D ++      G ++S +  A          + L   ++N    + P++DY  L++  N+    +            LP   L             ++Q+    R  +F  N+           L+G++S  N        +I   +  ++  Y  + +              S  +P + CS  C  G  K   +   TCC+ C++CP  E S   D+  C KC     +N+    C+    +  S T   G+ + + +++G   T F + V++    TP VK+TNRELS + L  +L  F   +  +   +   C  RQ  FG    L +  +L+KT R+  +F+ +      R +  ++ Q    F    ++  +  +W     PS        +      C +     L  +I Y  LL+    F AF++R LP NFNEA++I  +M  + I+W +F P + S+   + S + +   LA++F L+A +F NKI +++  P  N           H   +AA A +R
Sbjct:   33 ILGGLFPIHFGVAAKDQDLKSRPESVECIRYNFRGFRWLQAMIFAIEEINSSPALLPNLTLGYRIFDTCNTVSKALEATLSFVAQNKIDSLNLDEF------CNCSEHIPSTIAVVGATGSGVSTAVA-NLLGLFYIPQVSYASSSRLLSNKNQFKSFLRTIPNDEHQATAMADIIEYFRWNWVGTIAADDDYGRPGIEKFREEAEERDICIDFSELIS---QYSDEEEIQHVVEVIQNSTAKVIVVFSSGPDLEPLIKEIVRRNITGKIWLA-SEAWASSSLIAMPQYFHVVGGTIGFALKAGQIPGFREFLKKVHPRKSVHNGFAKEFWEETFNCHLQEGAKGPLPVDTFLRGHEESGDRFSNSSTA---------FRPLCTGDENISSVETPYIDYTHLRISYNVYLAVYSIAHALQDIYTCLPGRGLFTNGSCADIKKVEAWQVLKHLRHLNFTNNMGEQVTFDECGDLVGNYSIINWHLSPEDGSIVFKEVGYYNVYAKKGERLFINEEKILWSGFSREVPFSNCSRDCLAGTRKGIIEGEPTCCFECVECPDGEYSDETDASACNKCPDDFWSNENHTSCIAKEIEFLSWTEPFGIALTLFAVLGIFLTAFVLGVFIKFRNTPIVKATNRELSYLLLFSLLCCFSSSLFFIGEPQDWTCRLRQPAFGISFVLCISCILVKTNRVLLVFEAKIPTSFHRKWWGLNLQFLLVFLCTFMQIVICVIWLYTAPPSSYRNQELEDEIIFITCHEGSLMALGFLIGYTCLLAAICFFFAFKSRKLPENFNEAKFITFSMLIFFIVWISFIPAYASTYGKFVSAVEVIAILAASFGLLACIFFNKIYIILFKPSRNTIEEVRCSTAAHAFKVAARATLR 890
The following BLAST results are available for this feature:
BLAST of TCONS_00052075 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CASR2.838e-6125.40Extracellular calcium-sensing receptor OS=Homo sap... [more]
back to top