TCONS_00052062 (transcript) - C. hemisphaerica

Overview
NameTCONS_00052062
Unique NameTCONS_00052062
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length208

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00052062 ID=TCONS_00052062|Name=TCONS_00052062|organism=Clytia hemisphaerica|type=transcript|length=208bp
CTCCCCATATCCCTTCTTAATGCCACTTTCAATTTGGTACAACAAACTGC
TGTATGATATACAGTCTTTCTCCCCGTAACGTCCCAGCTTCCCAGTGATT
TTGAATTCTCGCATAAACACTTTTCTCATCTCTTCAAACTCATCAGATCT
GGCAGAATTCCTGGAGTCATTTCCAAGCCTCGAACGCCCAGGTGTAAAGG
GATTACGG
Run BLAST on NCBI

transcript from alignment at scaffold_209:108020..108227

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00052062 ID=TCONS_00052062|Name=TCONS_00052062|organism=Clytia hemisphaerica|type=transcript|length=208bp|location=Sequence derived from alignment at scaffold_209:108020..108227 (Clytia hemisphaerica)
CCGTAATCCCTTTACACCTGGGCGTTCGAGGCTTGGAAATGACTCCAGGA
ATTCTGCCAGATCTGATGAGTTTGAAGAGATGAGAAAAGTGTTTATGCGA
GAATTCAAAATCACTGGGAAGCTGGGACGTTACGGGGAGAAAGACTGTAT
ATCATACAGCAGTTTGTTGTACCAAATTGAAAGTGGCATTAAGAAGGGAT
ATGGGGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_032971XLOC_032971Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00052062-exon-scaffold_209-1491911889:108020..108227TCONS_00052062-exon-scaffold_209-1491911889:108020..108227Clytia hemisphaericaexon
TCONS_00052062-exon-scaffold_209-1510915933:108020..108227TCONS_00052062-exon-scaffold_209-1510915933:108020..108227Clytia hemisphaericaexon
TCONS_00052062-exon-scaffold_209-1575043694:108020..108227TCONS_00052062-exon-scaffold_209-1575043694:108020..108227Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_209supercontigscaffold_209:108020..108227 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00052062 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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